AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0338560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0338560 MtrunA17_Chr2g0326361 93.396 318 21 0 2 319 1 318 0.0 610
Msa0338560 MtrunA17_Chr7g0263931 48.024 329 141 5 11 319 7 325 2.42e-94 283
Msa0338560 MtrunA17_Chr5g0417791 67.059 170 54 1 15 184 3 170 7.43e-83 251
Msa0338560 MtrunA17_Chr4g0042561 67.052 173 55 1 9 181 3 173 4.22e-82 249
Msa0338560 MtrunA17_Chr2g0318101 48.810 252 84 6 15 259 15 228 9.28e-80 246
Msa0338560 MtrunA17_Chr7g0252971 66.286 175 50 4 15 181 8 181 6.12e-79 244
Msa0338560 MtrunA17_Chr4g0047841 63.842 177 45 2 15 172 15 191 1.49e-78 243
Msa0338560 MtrunA17_Chr3g0124761 61.538 169 61 2 11 179 3 167 3.69e-72 224
Msa0338560 MtrunA17_Chr8g0384721 54.595 185 74 2 15 192 7 188 1.50e-70 220
Msa0338560 MtrunA17_Chr2g0318081 58.046 174 67 3 1 174 2 169 2.11e-67 214
Msa0338560 MtrunA17_Chr8g0359921 60.345 174 60 4 11 184 10 174 9.59e-66 209
Msa0338560 MtrunA17_Chr3g0130731 60.000 155 58 2 15 169 7 157 1.97e-64 205
Msa0338560 MtrunA17_Chr5g0417001 52.907 172 77 2 2 169 1 172 2.02e-60 197
Msa0338560 MtrunA17_Chr8g0361731 52.601 173 77 2 2 169 1 173 3.33e-58 192
Msa0338560 MtrunA17_Chr6g0453131 50.562 178 82 2 17 189 17 193 1.63e-56 187
Msa0338560 MtrunA17_Chr6g0481091 49.405 168 77 3 15 180 6 167 1.96e-53 175
Msa0338560 MtrunA17_Chr2g0309891 47.953 171 82 3 14 182 5 170 2.51e-53 178
Msa0338560 MtrunA17_Chr3g0139331 46.305 203 101 4 5 206 2 197 3.17e-53 177
Msa0338560 MtrunA17_Chr1g0147421 46.860 207 89 5 2 205 15 203 5.31e-53 177
Msa0338560 MtrunA17_Chr2g0316971 55.484 155 67 1 15 169 23 175 5.53e-53 178
Msa0338560 MtrunA17_Chr6g0484441 52.500 160 68 2 15 174 5 156 8.14e-53 176
Msa0338560 MtrunA17_Chr6g0453451 51.190 168 78 2 9 176 14 177 1.15e-52 176
Msa0338560 MtrunA17_Chr7g0214071 54.605 152 60 2 15 166 15 157 1.44e-51 171
Msa0338560 MtrunA17_Chr4g0060931 51.515 165 66 3 15 174 17 172 2.38e-51 173
Msa0338560 MtrunA17_Chr3g0091921 51.515 165 76 3 10 174 11 171 7.85e-51 170
Msa0338560 MtrunA17_Chr4g0076731 53.333 150 63 3 17 166 56 198 2.49e-50 172
Msa0338560 MtrunA17_Chr5g0433781 53.416 161 61 4 14 169 5 156 3.99e-50 176
Msa0338560 MtrunA17_Chr2g0309331 45.550 191 92 4 14 201 9 190 8.71e-50 169
Msa0338560 MtrunA17_Chr7g0253011 49.112 169 82 3 8 174 10 176 2.04e-49 169
Msa0338560 MtrunA17_Chr1g0183741 45.455 176 88 2 14 189 9 176 4.63e-49 165
Msa0338560 MtrunA17_Chr5g0442771 48.571 175 84 3 17 185 20 194 5.96e-49 166
Msa0338560 MtrunA17_Chr4g0018391 49.123 171 70 5 16 179 8 168 8.16e-49 166
Msa0338560 MtrunA17_Chr8g0346001 47.929 169 78 3 16 176 16 182 3.42e-48 167
Msa0338560 MtrunA17_Chr3g0109821 51.266 158 70 3 14 169 5 157 3.81e-48 171
Msa0338560 MtrunA17_Chr8g0385991 51.948 154 69 3 15 166 14 164 1.11e-47 160
Msa0338560 MtrunA17_Chr4g0017921 50.000 164 70 3 9 169 2 156 2.26e-47 162
Msa0338560 MtrunA17_Chr8g0372121 45.349 172 83 3 16 184 7 170 3.24e-47 161
Msa0338560 MtrunA17_Chr4g0054791 45.810 179 88 4 14 188 5 178 4.43e-47 161
Msa0338560 MtrunA17_Chr4g0038751 45.882 170 82 2 17 185 17 177 5.29e-47 160
Msa0338560 MtrunA17_Chr7g0261411 49.020 153 70 2 14 166 9 153 7.08e-47 159
Msa0338560 MtrunA17_Chr6g0461661 47.337 169 83 3 2 166 1 167 8.31e-47 162
Msa0338560 MtrunA17_Chr5g0405211 49.045 157 69 3 16 169 9 157 2.17e-46 160
Msa0338560 MtrunA17_Chr2g0311651 48.125 160 73 4 17 166 24 183 3.71e-46 158
Msa0338560 MtrunA17_Chr4g0056541 44.186 172 84 4 16 183 8 171 5.99e-46 159
Msa0338560 MtrunA17_Chr2g0311661 45.833 168 81 4 17 174 23 190 7.15e-46 157
Msa0338560 MtrunA17_Chr3g0144271 53.147 143 66 1 1 142 9 151 9.12e-46 160
Msa0338560 MtrunA17_Chr1g0200561 48.408 157 70 3 16 169 20 168 9.22e-46 158
Msa0338560 MtrunA17_Chr5g0398971 48.428 159 69 4 16 169 8 158 1.68e-45 157
Msa0338560 MtrunA17_Chr2g0312321 48.026 152 72 3 15 166 11 155 4.84e-45 155
Msa0338560 MtrunA17_Chr5g0400461 47.273 165 69 4 14 169 5 160 6.70e-45 155
Msa0338560 MtrunA17_Chr3g0131911 49.123 171 74 5 15 174 14 182 1.72e-43 149
Msa0338560 MtrunA17_Chr7g0217711 53.125 128 58 1 15 142 19 144 9.42e-43 145
Msa0338560 MtrunA17_Chr7g0217721 41.667 192 91 3 15 187 19 208 1.22e-42 150
Msa0338560 MtrunA17_Chr1g0201021 52.344 128 57 2 17 142 21 146 8.38e-42 152
Msa0338560 MtrunA17_Chr3g0130101 45.806 155 76 4 17 169 9 157 2.69e-41 147
Msa0338560 MtrunA17_Chr1g0197351 46.875 160 79 3 14 169 41 198 5.11e-41 149
Msa0338560 MtrunA17_Chr3g0128151 45.810 179 84 6 14 186 21 192 3.38e-40 148
Msa0338560 MtrunA17_Chr5g0428991 45.506 178 84 6 15 186 25 195 3.52e-40 148
Msa0338560 MtrunA17_Chr1g0197361 44.586 157 75 5 17 169 10 158 3.75e-39 145
Msa0338560 MtrunA17_Chr8g0364791 43.871 155 79 4 17 169 8 156 2.70e-38 140
Msa0338560 MtrunA17_Chr3g0128111 42.135 178 84 5 18 186 45 212 3.73e-38 135
Msa0338560 MtrunA17_Chr3g0092671 43.590 156 78 4 17 169 7 155 2.19e-37 140
Msa0338560 MtrunA17_Chr8g0384201 42.581 155 81 4 17 169 8 156 6.54e-37 137
Msa0338560 MtrunA17_Chr4g0026141 45.283 159 76 5 15 166 5 159 5.58e-36 130
Msa0338560 MtrunA17_Chr8g0345671 44.937 158 74 5 12 166 8 155 5.90e-36 134
Msa0338560 MtrunA17_Chr7g0266701 40.719 167 91 4 15 174 4 169 1.03e-34 127
Msa0338560 MtrunA17_Chr4g0050701 37.580 157 88 2 15 169 11 159 1.84e-33 122
Msa0338560 MtrunA17_Chr2g0321631 42.138 159 80 5 16 166 5 159 6.72e-32 119
Msa0338560 MtrunA17_Chr8g0345691 42.857 154 75 5 16 166 13 156 8.72e-32 122
Msa0338560 MtrunA17_Chr2g0321741 40.523 153 77 3 36 187 13 152 8.72e-32 121
Msa0338560 MtrunA17_Chr8g0345711 38.509 161 88 5 14 164 11 170 2.56e-30 113
Msa0338560 MtrunA17_Chr8g0384351 37.654 162 75 5 8 169 3 138 3.11e-27 105
Msa0338560 MtrunA17_Chr3g0113001 51.485 101 46 2 66 166 16 113 3.32e-27 108
Msa0338560 MtrunA17_Chr8g0345731 40.152 132 74 3 15 141 24 155 8.96e-27 103
Msa0338560 MtrunA17_Chr8g0345721 35.928 167 69 4 14 143 29 194 6.09e-26 102
Msa0338560 MtrunA17_Chr8g0345741 42.017 119 65 3 26 141 2 119 1.09e-24 97.8
Msa0338560 MtrunA17_Chr7g0243371 56.000 75 33 0 68 142 17 91 2.01e-23 93.2
Msa0338560 MtrunA17_Chr3g0113031 50.562 89 42 1 78 166 3 89 1.06e-22 95.5
Msa0338560 MtrunA17_Chr3g0130321 35.976 164 81 8 15 166 7 158 1.45e-21 90.9
Msa0338560 MtrunA17_Chr8g0345701 34.228 149 78 5 10 141 2 147 1.16e-20 87.4
Msa0338560 MtrunA17_Chr7g0251661 31.250 128 82 4 15 140 10 133 5.95e-16 73.9
Msa0338560 MtrunA17_Chr7g0251651 27.711 166 112 5 9 170 12 173 6.82e-16 74.7
Msa0338560 MtrunA17_Chr3g0113011 55.319 47 21 0 15 61 19 65 1.27e-11 59.7
Msa0338560 MtrunA17_Chr1g0168571 32.258 155 84 7 23 167 13 156 2.82e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0338560 AT1G69490.1 66.471 170 55 1 11 180 5 172 4.49e-81 247
Msa0338560 AT1G61110.1 67.647 170 38 3 15 172 16 180 3.34e-79 244
Msa0338560 AT3G15510.1 61.404 171 59 1 19 182 21 191 3.02e-76 238
Msa0338560 AT1G77450.1 58.989 178 69 2 9 186 4 177 1.52e-73 227
Msa0338560 AT3G04070.2 55.340 206 76 5 14 207 9 210 2.11e-73 230
Msa0338560 AT3G04070.1 53.153 222 72 6 14 207 9 226 1.32e-72 228
Msa0338560 AT1G01720.1 66.452 155 49 1 15 169 7 158 7.84e-72 224
Msa0338560 AT5G08790.1 58.857 175 68 2 10 183 2 173 1.01e-69 218
Msa0338560 AT1G52880.1 69.427 157 42 3 19 169 21 177 6.25e-69 218
Msa0338560 AT5G63790.1 57.865 178 70 3 10 185 45 219 6.18e-68 215
Msa0338560 AT5G63790.2 57.865 178 70 3 10 185 55 229 6.32e-68 215
Msa0338560 AT4G27410.2 59.748 159 58 3 11 169 10 162 7.64e-67 212
Msa0338560 AT3G15500.1 58.580 169 64 3 11 179 10 172 1.12e-66 212
Msa0338560 AT1G52890.1 59.524 168 62 3 2 169 1 162 1.29e-66 212
Msa0338560 AT4G27410.3 53.977 176 58 4 11 169 10 179 2.31e-62 201
Msa0338560 AT1G26870.1 46.500 200 100 2 17 209 18 217 4.64e-57 190
Msa0338560 AT1G76420.1 52.147 163 73 1 15 177 22 179 2.31e-55 183
Msa0338560 AT2G24430.2 51.176 170 78 2 5 174 6 170 5.67e-55 182
Msa0338560 AT2G24430.1 51.176 170 78 2 5 174 6 170 5.67e-55 182
Msa0338560 AT5G39820.1 42.381 210 104 2 17 209 22 231 3.14e-54 180
Msa0338560 AT5G07680.2 55.484 155 65 3 15 169 3 153 5.82e-54 179
Msa0338560 AT5G07680.1 55.484 155 65 3 15 169 17 167 6.60e-54 179
Msa0338560 AT5G53950.1 53.374 163 73 2 7 169 10 169 1.62e-53 179
Msa0338560 AT5G39610.1 53.125 160 61 3 15 169 20 170 4.88e-53 176
Msa0338560 AT5G13180.1 55.263 152 60 3 15 166 14 157 9.55e-53 174
Msa0338560 AT3G04060.1 52.439 164 75 3 6 169 11 171 1.30e-52 176
Msa0338560 AT5G61430.1 52.469 162 73 3 15 176 16 173 1.87e-52 176
Msa0338560 AT3G15170.1 54.305 151 67 1 16 166 21 169 3.84e-52 174
Msa0338560 AT1G65910.1 51.136 176 77 5 14 187 5 173 4.68e-52 181
Msa0338560 AT3G29035.1 57.042 142 58 2 1 142 11 149 1.73e-51 172
Msa0338560 AT5G18270.1 51.534 163 76 3 7 169 13 172 3.54e-51 172
Msa0338560 AT2G02450.1 54.667 150 61 3 17 166 53 195 3.63e-51 174
Msa0338560 AT2G02450.2 54.667 150 61 3 17 166 53 195 3.80e-51 174
Msa0338560 AT3G17730.1 52.229 157 67 4 15 169 6 156 5.65e-51 169
Msa0338560 AT3G03200.1 51.875 160 66 4 14 169 5 157 8.24e-51 175
Msa0338560 AT5G18270.2 51.534 163 76 3 7 169 13 172 8.66e-51 171
Msa0338560 AT3G18400.1 50.625 160 72 2 15 174 5 157 1.21e-50 170
Msa0338560 AT2G33480.1 53.896 154 58 4 15 166 15 157 2.34e-50 168
Msa0338560 AT2G33480.2 53.896 154 56 4 15 166 15 155 2.68e-50 168
Msa0338560 AT2G17040.1 43.602 211 99 5 17 221 8 204 3.14e-50 168
Msa0338560 AT2G43000.1 49.057 159 76 2 17 175 20 173 4.79e-50 167
Msa0338560 AT5G17260.1 51.250 160 67 4 14 169 5 157 8.04e-50 172
Msa0338560 AT5G46590.1 50.000 178 78 5 15 188 6 176 9.74e-50 167
Msa0338560 AT4G10350.1 51.235 162 70 3 8 166 2 157 1.66e-48 166
Msa0338560 AT1G79580.3 50.314 159 68 3 14 169 16 166 2.74e-48 166
Msa0338560 AT1G79580.5 50.314 159 68 3 14 169 16 166 2.74e-48 166
Msa0338560 AT1G79580.4 50.314 159 68 3 14 169 16 166 2.74e-48 166
Msa0338560 AT1G79580.2 50.314 159 68 3 14 169 16 166 2.74e-48 166
Msa0338560 AT1G79580.1 50.314 159 68 3 14 169 16 166 2.74e-48 166
Msa0338560 AT4G17980.1 50.920 163 66 5 14 169 5 160 9.52e-48 161
Msa0338560 AT1G33280.1 51.220 164 68 3 9 169 2 156 1.01e-47 162
Msa0338560 AT4G17980.2 50.920 163 66 5 14 169 5 160 1.04e-47 162
Msa0338560 AT1G71930.2 48.428 159 71 3 14 169 8 158 2.28e-47 162
Msa0338560 AT1G71930.1 48.428 159 71 3 14 169 8 158 2.28e-47 162
Msa0338560 AT4G36160.1 37.847 288 150 8 14 291 9 277 9.27e-47 162
Msa0338560 AT4G36160.3 37.847 288 150 8 14 291 9 277 9.27e-47 162
Msa0338560 AT4G36160.2 37.847 288 150 8 14 291 13 281 9.81e-47 162
Msa0338560 AT1G56010.2 47.436 156 78 3 15 169 19 171 1.79e-46 160
Msa0338560 AT4G28530.1 47.093 172 67 3 15 170 10 173 3.47e-46 160
Msa0338560 AT2G18060.3 47.799 159 72 3 14 169 8 158 3.56e-46 160
Msa0338560 AT2G18060.1 47.799 159 72 3 14 169 8 158 3.56e-46 160
Msa0338560 AT5G46590.2 54.815 135 58 2 15 147 6 139 3.88e-46 158
Msa0338560 AT3G10480.1 47.826 161 77 3 11 169 23 178 4.06e-46 162
Msa0338560 AT1G12260.2 45.087 173 83 4 16 184 8 172 4.76e-46 159
Msa0338560 AT5G66300.1 47.093 172 78 4 1 169 1 162 8.91e-46 157
Msa0338560 AT1G12260.1 49.351 154 67 3 16 166 8 153 1.13e-45 159
Msa0338560 AT3G10480.2 48.447 161 75 4 11 169 23 177 1.13e-45 160
Msa0338560 AT1G54330.1 48.101 158 71 3 14 169 5 153 1.87e-45 156
Msa0338560 AT1G62700.1 44.571 175 84 4 16 185 8 174 3.44e-45 158
Msa0338560 AT1G62700.2 44.571 175 84 4 16 185 8 174 3.44e-45 158
Msa0338560 AT1G32770.1 47.305 167 76 5 15 171 16 180 4.88e-45 157
Msa0338560 AT5G62380.2 46.341 164 77 3 15 175 7 162 7.24e-45 156
Msa0338560 AT5G62380.1 46.341 164 77 3 15 175 7 162 7.24e-45 156
Msa0338560 AT3G10490.1 46.835 158 77 3 14 169 26 178 7.98e-45 153
Msa0338560 AT3G12977.1 45.806 155 79 2 15 169 18 167 9.09e-45 154
Msa0338560 AT2G46770.1 43.646 181 84 5 15 183 16 190 2.84e-44 155
Msa0338560 AT1G32510.1 48.447 161 69 4 15 166 6 161 3.54e-44 152
Msa0338560 AT3G10500.1 46.951 164 79 3 8 169 2 159 7.69e-44 158
Msa0338560 AT3G10490.2 46.835 158 77 3 14 169 26 178 2.94e-43 154
Msa0338560 AT1G33060.2 50.633 158 70 4 14 169 23 174 6.64e-43 156
Msa0338560 AT1G33060.1 50.633 158 70 4 14 169 23 174 7.09e-43 156
Msa0338560 AT3G10480.3 40.722 194 75 4 11 169 23 211 1.47e-42 154
Msa0338560 AT4G35580.2 54.412 136 58 2 8 141 2 135 2.40e-42 154
Msa0338560 AT4G35580.3 54.412 136 58 2 8 141 2 135 2.57e-42 153
Msa0338560 AT4G35580.1 54.412 136 58 2 8 141 2 135 2.92e-42 153
Msa0338560 AT1G34180.3 52.344 128 57 2 17 142 18 143 4.47e-42 151
Msa0338560 AT3G61910.1 42.614 176 83 4 15 176 11 182 1.29e-41 147
Msa0338560 AT5G04410.1 45.122 164 82 3 8 169 2 159 1.50e-41 152
Msa0338560 AT1G34180.1 52.344 128 57 2 17 142 18 143 2.06e-41 151
Msa0338560 AT1G34190.1 50.781 128 59 2 17 142 18 143 4.60e-41 150
Msa0338560 AT5G24590.2 43.646 181 90 5 14 188 12 186 4.68e-40 146
Msa0338560 AT3G12910.1 47.205 161 73 5 17 166 23 182 1.12e-39 141
Msa0338560 AT1G34180.4 47.857 140 57 3 17 142 18 155 5.17e-39 143
Msa0338560 AT5G09330.5 42.581 155 81 3 17 169 8 156 9.14e-39 143
Msa0338560 AT5G09330.2 42.581 155 81 3 17 169 8 156 9.14e-39 143
Msa0338560 AT5G09330.4 42.581 155 81 3 17 169 8 156 9.14e-39 143
Msa0338560 AT5G09330.3 42.581 155 81 3 17 169 8 156 9.14e-39 143
Msa0338560 AT5G09330.1 42.581 155 81 3 17 169 8 156 9.14e-39 143
Msa0338560 AT1G34180.2 47.857 140 57 3 17 142 18 155 2.17e-38 143
Msa0338560 AT3G44290.2 38.636 176 91 4 17 191 16 175 2.65e-38 135
Msa0338560 AT2G27300.1 34.934 229 127 6 17 233 16 234 3.15e-38 139
Msa0338560 AT5G22290.1 42.614 176 83 6 14 187 20 179 1.06e-37 137
Msa0338560 AT3G49530.2 48.120 133 66 2 14 144 12 143 1.88e-37 138
Msa0338560 AT3G49530.1 48.120 133 66 2 14 144 12 143 2.42e-37 139
Msa0338560 AT3G44290.1 38.983 177 89 5 17 191 16 175 2.75e-37 136
Msa0338560 AT5G64060.1 40.127 157 86 3 15 169 6 156 5.20e-36 133
Msa0338560 AT5G04395.1 41.611 149 73 2 9 143 22 170 6.55e-35 125
Msa0338560 AT1G32870.2 45.181 166 83 4 9 172 4 163 9.28e-35 132
Msa0338560 AT1G32870.1 45.181 166 83 4 9 172 4 163 1.07e-34 132
Msa0338560 AT1G32870.3 45.181 166 83 4 9 172 40 199 1.31e-34 132
Msa0338560 AT5G22380.1 41.290 155 82 4 18 166 8 159 1.59e-32 121
Msa0338560 AT5G64530.1 36.517 178 86 4 15 182 3 163 3.91e-32 118
Msa0338560 AT5G64530.2 43.077 130 62 2 15 144 3 120 9.49e-32 116
Msa0338560 AT5G61430.2 51.351 111 50 3 66 176 4 110 4.70e-30 115
Msa0338560 AT3G44350.1 43.165 139 69 4 18 149 8 143 5.27e-30 112
Msa0338560 AT4G28530.2 38.953 172 44 4 15 170 10 136 5.69e-30 116
Msa0338560 AT3G44350.2 38.710 186 93 8 18 193 8 182 2.06e-29 113
Msa0338560 AT4G01550.1 40.113 177 92 6 18 190 7 173 3.94e-29 116
Msa0338560 AT1G56010.1 50.000 106 50 2 64 169 2 104 5.36e-29 112
Msa0338560 AT4G01520.1 40.625 160 81 6 16 170 5 155 2.20e-28 111
Msa0338560 AT3G12977.2 50.485 103 46 2 67 169 17 114 3.70e-28 109
Msa0338560 AT2G33480.3 53.465 101 37 3 68 166 8 100 5.24e-28 108
Msa0338560 AT4G10350.2 54.545 99 39 2 68 166 18 110 6.98e-28 110
Msa0338560 AT4G01540.3 40.506 158 80 6 18 170 7 155 4.20e-27 110
Msa0338560 AT4G01540.4 40.506 158 80 6 18 170 7 155 4.57e-27 109
Msa0338560 AT4G01540.2 40.506 158 80 6 18 170 7 155 4.65e-27 110
Msa0338560 AT4G01540.1 40.506 158 80 6 18 170 7 155 5.34e-27 110
Msa0338560 AT3G04420.2 36.478 159 86 4 16 170 4 151 1.54e-25 103
Msa0338560 AT3G04420.1 36.478 159 86 4 16 170 4 151 2.52e-25 104
Msa0338560 AT1G02230.1 39.231 130 71 4 16 140 4 130 3.04e-23 99.0
Msa0338560 AT1G01010.1 34.595 185 94 7 18 189 6 176 1.53e-21 94.7
Msa0338560 AT5G14000.2 38.931 131 74 4 15 143 15 141 2.28e-21 89.4
Msa0338560 AT2G43000.2 46.465 99 48 2 77 175 2 95 3.66e-21 89.7
Msa0338560 AT5G14000.1 38.931 131 74 4 15 143 15 141 6.86e-21 89.4
Msa0338560 AT1G02250.1 33.125 160 91 5 16 170 4 152 3.23e-20 90.5
Msa0338560 AT1G02220.1 37.984 129 71 4 16 140 4 127 1.71e-19 88.6
Msa0338560 AT3G56530.1 36.232 138 77 4 9 140 46 178 4.42e-18 83.6
Msa0338560 AT3G10490.4 47.561 82 38 2 88 169 2 78 8.63e-17 80.5
Msa0338560 AT3G10490.3 47.561 82 38 2 88 169 2 78 8.63e-17 80.5
Msa0338560 AT3G55210.1 30.769 169 91 6 13 166 9 166 3.52e-15 74.7
Msa0338560 AT5G50820.1 32.353 136 80 5 15 147 17 143 2.19e-14 70.9
Msa0338560 AT5G22290.2 49.367 79 27 3 94 171 2 68 1.00e-13 70.1
Msa0338560 AT2G18060.2 45.455 77 34 2 93 169 2 70 1.15e-13 70.5
Msa0338560 AT1G28470.1 32.877 146 77 8 14 142 76 217 8.09e-12 65.5
Msa0338560 AT3G04430.1 39.423 104 59 4 21 122 6 107 1.44e-11 63.2

Find 66 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCCACATGAAGAAATTAT+TGG 0.169206 2_4:+58914230 None:intergenic
TCACCCCTTGGTAGGTTTAA+TGG 0.204888 2_4:+58913873 None:intergenic
CCTGAAGCTGCTGTTCTATT+TGG 0.206711 2_4:+58914281 None:intergenic
ATGTCGGGTTTGAGCGTTAA+TGG 0.254915 2_4:-58913735 Msa0338560:CDS
TGGAAAAGTGTAATTTGATT+TGG 0.281222 2_4:+58914618 None:intergenic
TTGATGGAGGGACAACAAAA+TGG 0.308259 2_4:-58914643 Msa0338560:CDS
GGTAGGTTTAATGGTATGTT+TGG 0.328988 2_4:+58913882 None:intergenic
GAACAGCAGCTTCAGGATAC+TGG 0.343249 2_4:-58914274 Msa0338560:CDS
TTATGTCGGGTTCGAAATAA+AGG 0.361202 2_4:-58913951 Msa0338560:CDS
TTAATCCATTCGGATACTTT+CGG 0.372999 2_4:+58914306 None:intergenic
GAAAGTATCCGAATGGATTA+AGG 0.374920 2_4:-58914304 Msa0338560:CDS
GATTGAAAGTTCACGTTTGT+AGG 0.387582 2_4:+58913843 None:intergenic
CCAAATAGAACAGCAGCTTC+AGG 0.393395 2_4:-58914281 Msa0338560:CDS
CTTTGTTTGGTGAGGAAGAA+TGG 0.399941 2_4:-58914349 Msa0338560:CDS
TTCGGATACTTTCGGTCTCT+CGG 0.404947 2_4:+58914314 None:intergenic
TCAGGATACTGGAAGGCAAC+TGG 0.417107 2_4:-58914263 Msa0338560:CDS
GCTATAATCGACGCTGGAAG+TGG 0.423391 2_4:+58914523 None:intergenic
ATAACTTCAGTTTCTGAAGA+AGG 0.424888 2_4:-58913696 Msa0338560:CDS
CTATTTGGCCTTAATCCATT+CGG 0.425340 2_4:+58914296 None:intergenic
ATCATAGCCTCTATTCTAGT+TGG 0.432373 2_4:-58913783 Msa0338560:CDS
TTATTCAGGTAGACCTCCTA+AGG 0.433041 2_4:-58914174 Msa0338560:CDS
TATGCAGAGAAGTCTTTGTT+TGG 0.458147 2_4:-58914362 Msa0338560:intron
GTAGGGCGTTCTTCACCCCT+TGG 0.470540 2_4:+58913861 None:intergenic
CAATCTGTCTTAACTCCCTT+AGG 0.472334 2_4:+58914158 None:intergenic
TTGAAGTAACATTCTAAAGA+AGG 0.474571 2_4:+58913642 None:intergenic
CTAAGGGAGTTAAGACAGAT+TGG 0.476497 2_4:-58914157 Msa0338560:CDS
TTTGAGTTTGAATGATTTCG+TGG 0.477326 2_4:+58914103 None:intergenic
TTGCTGATATCTTTATGTAA+AGG 0.481819 2_4:+58913488 None:intergenic
TCATGTGGATCAAAGCATAT+AGG 0.483990 2_4:-58914218 Msa0338560:CDS
AATGGTATGTTTGGTTCACT+AGG 0.489315 2_4:+58913891 None:intergenic
AGCATAAAATTCTTTGATGG+AGG 0.500427 2_4:-58914656 None:intergenic
GATCATGAATGAGTATAGAT+TGG 0.501119 2_4:-58914135 Msa0338560:CDS
ATTGAAAGTTCACGTTTGTA+GGG 0.501588 2_4:+58913844 None:intergenic
ATCTCTATAAGTATAATCCA+TGG 0.503265 2_4:-58914492 Msa0338560:CDS
GGATGACTGGGTATTATGTC+GGG 0.505374 2_4:-58913964 Msa0338560:CDS
TGGATGACTGGGTATTATGT+CGG 0.511953 2_4:-58913965 Msa0338560:CDS
CCCGACATATTCTCAGTTGG+AGG 0.519660 2_4:+58913750 None:intergenic
CCTCCAACTGAGAATATGTC+GGG 0.520657 2_4:-58913750 Msa0338560:CDS
ATAGCCTCTATTCTAGTTGG+AGG 0.523275 2_4:-58913780 Msa0338560:CDS
AACTCCTCCAACTAGAATAG+AGG 0.529579 2_4:+58913776 None:intergenic
AACATACTTGGTAATTCCCA+TGG 0.531160 2_4:+58914475 None:intergenic
TGAAGTAACATTCTAAAGAA+GGG 0.537880 2_4:+58913643 None:intergenic
GGCGTTCTTCACCCCTTGGT+AGG 0.545615 2_4:+58913865 None:intergenic
AAGCCAATAATTTCTTCATG+TGG 0.547565 2_4:-58914233 Msa0338560:CDS
GCATAAAATTCTTTGATGGA+GGG 0.552629 2_4:-58914655 None:intergenic
TGAGTTCTTCATCAGAAGGA+TGG 0.561435 2_4:+58914581 None:intergenic
ACGAAATCATTCAAACTCAA+AGG 0.572394 2_4:-58914101 Msa0338560:CDS
TAATTGAAAACTTACCCGCA+TGG 0.592584 2_4:+58914076 None:intergenic
AAACCCGACATATTCTCAGT+TGG 0.595124 2_4:+58913747 None:intergenic
ACTTAAAAGAAAATCTAATG+AGG 0.595312 2_4:-58913616 Msa0338560:CDS
AGAGAAGTCTTTGTTTGGTG+AGG 0.597719 2_4:-58914357 Msa0338560:CDS
ACCTCCAACTGAGAATATGT+CGG 0.601698 2_4:-58913751 Msa0338560:CDS
ATTTCAGCTATAATCGACGC+TGG 0.604840 2_4:+58914517 None:intergenic
TCTGTCTTAACTCCCTTAGG+AGG 0.608939 2_4:+58914161 None:intergenic
ACTATGAGTTCTTCATCAGA+AGG 0.609045 2_4:+58914577 None:intergenic
TCTCTATAAGTATAATCCAT+GGG 0.617155 2_4:-58914491 Msa0338560:CDS
ACATACCATTAAACCTACCA+AGG 0.620960 2_4:-58913878 Msa0338560:CDS
AGAGACCGAAAGTATCCGAA+TGG 0.624198 2_4:-58914311 Msa0338560:CDS
CAAACTCAAAGGTTCCATGC+GGG 0.628355 2_4:-58914090 Msa0338560:intron
CATACCATTAAACCTACCAA+GGG 0.628364 2_4:-58913877 Msa0338560:CDS
TATTCAGGTAGACCTCCTAA+GGG 0.630503 2_4:-58914173 Msa0338560:CDS
AGCAGCTTCAGGATACTGGA+AGG 0.648622 2_4:-58914270 Msa0338560:CDS
GAAGGATGGAATCTGAAACC+AGG 0.664271 2_4:+58914595 None:intergenic
GGATGGAATCTGAAACCAGG+TGG 0.688994 2_4:+58914598 None:intergenic
TCAAACTCAAAGGTTCCATG+CGG 0.709010 2_4:-58914091 Msa0338560:CDS
ATACCATTAAACCTACCAAG+GGG 0.738597 2_4:-58913876 Msa0338560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTATGATAAACAAGATT+TGG + chr2_4:58913737-58913756 None:intergenic 20.0%
!!! TCATTAGATTTTCTTTTAAG+TGG + chr2_4:58914528-58914547 None:intergenic 20.0%
!! ACTTAAAAGAAAATCTAATG+AGG - chr2_4:58914527-58914546 Msa0338560:CDS 20.0%
!! TCATTATGATAAACAAGATT+TGG + chr2_4:58913737-58913756 None:intergenic 20.0%
!!! TCATTAGATTTTCTTTTAAG+TGG + chr2_4:58914528-58914547 None:intergenic 20.0%
!! ACTTAAAAGAAAATCTAATG+AGG - chr2_4:58914527-58914546 Msa0338560:CDS 20.0%
!! TGGAAAAGTGTAATTTGATT+TGG + chr2_4:58913528-58913547 None:intergenic 25.0%
! ATCTCTATAAGTATAATCCA+TGG - chr2_4:58913651-58913670 Msa0338560:CDS 25.0%
! TCTCTATAAGTATAATCCAT+GGG - chr2_4:58913652-58913671 Msa0338560:CDS 25.0%
!!! AAATCTCTTGTGTTTTATTC+AGG - chr2_4:58913955-58913974 Msa0338560:CDS 25.0%
!! TGAAGTAACATTCTAAAGAA+GGG + chr2_4:58914503-58914522 None:intergenic 25.0%
!! TTGAAGTAACATTCTAAAGA+AGG + chr2_4:58914504-58914523 None:intergenic 25.0%
!! TGGAAAAGTGTAATTTGATT+TGG + chr2_4:58913528-58913547 None:intergenic 25.0%
! ATCTCTATAAGTATAATCCA+TGG - chr2_4:58913651-58913670 Msa0338560:CDS 25.0%
! TCTCTATAAGTATAATCCAT+GGG - chr2_4:58913652-58913671 Msa0338560:CDS 25.0%
!!! AAATCTCTTGTGTTTTATTC+AGG - chr2_4:58913955-58913974 Msa0338560:CDS 25.0%
!! TGAAGTAACATTCTAAAGAA+GGG + chr2_4:58914503-58914522 None:intergenic 25.0%
!! TTGAAGTAACATTCTAAAGA+AGG + chr2_4:58914504-58914523 None:intergenic 25.0%
AAAGAAGTCAAGAACATACT+TGG + chr2_4:58913683-58913702 None:intergenic 30.0%
TTAATCCATTCGGATACTTT+CGG + chr2_4:58913840-58913859 None:intergenic 30.0%
AAGCCAATAATTTCTTCATG+TGG - chr2_4:58913910-58913929 Msa0338560:CDS 30.0%
GATCCACATGAAGAAATTAT+TGG + chr2_4:58913916-58913935 None:intergenic 30.0%
GATCATGAATGAGTATAGAT+TGG - chr2_4:58914008-58914027 Msa0338560:intron 30.0%
! TTTGAGTTTGAATGATTTCG+TGG + chr2_4:58914043-58914062 None:intergenic 30.0%
ACGAAATCATTCAAACTCAA+AGG - chr2_4:58914042-58914061 Msa0338560:intron 30.0%
GTTCAAGCACTATGAATAAA+GGG + chr2_4:58914122-58914141 None:intergenic 30.0%
AGTTCAAGCACTATGAATAA+AGG + chr2_4:58914123-58914142 None:intergenic 30.0%
ATTGAAAGTTCACGTTTGTA+GGG + chr2_4:58914302-58914321 None:intergenic 30.0%
! ATAACTTCAGTTTCTGAAGA+AGG - chr2_4:58914447-58914466 Msa0338560:intron 30.0%
AAAGAAGTCAAGAACATACT+TGG + chr2_4:58913683-58913702 None:intergenic 30.0%
TTAATCCATTCGGATACTTT+CGG + chr2_4:58913840-58913859 None:intergenic 30.0%
AAGCCAATAATTTCTTCATG+TGG - chr2_4:58913910-58913929 Msa0338560:CDS 30.0%
GATCCACATGAAGAAATTAT+TGG + chr2_4:58913916-58913935 None:intergenic 30.0%
GATCATGAATGAGTATAGAT+TGG - chr2_4:58914008-58914027 Msa0338560:intron 30.0%
! TTTGAGTTTGAATGATTTCG+TGG + chr2_4:58914043-58914062 None:intergenic 30.0%
ACGAAATCATTCAAACTCAA+AGG - chr2_4:58914042-58914061 Msa0338560:intron 30.0%
GTTCAAGCACTATGAATAAA+GGG + chr2_4:58914122-58914141 None:intergenic 30.0%
AGTTCAAGCACTATGAATAA+AGG + chr2_4:58914123-58914142 None:intergenic 30.0%
ATTGAAAGTTCACGTTTGTA+GGG + chr2_4:58914302-58914321 None:intergenic 30.0%
! ATAACTTCAGTTTCTGAAGA+AGG - chr2_4:58914447-58914466 Msa0338560:intron 30.0%
! TCAAATTACACTTTTCCACC+TGG - chr2_4:58913530-58913549 Msa0338560:CDS 35.0%
ACTATGAGTTCTTCATCAGA+AGG + chr2_4:58913569-58913588 None:intergenic 35.0%
! AACATACTTGGTAATTCCCA+TGG + chr2_4:58913671-58913690 None:intergenic 35.0%
TATGCAGAGAAGTCTTTGTT+TGG - chr2_4:58913781-58913800 Msa0338560:CDS 35.0%
!! GAAAGTATCCGAATGGATTA+AGG - chr2_4:58913839-58913858 Msa0338560:CDS 35.0%
!! CTATTTGGCCTTAATCCATT+CGG + chr2_4:58913850-58913869 None:intergenic 35.0%
TCATGTGGATCAAAGCATAT+AGG - chr2_4:58913925-58913944 Msa0338560:CDS 35.0%
TAATTGAAAACTTACCCGCA+TGG + chr2_4:58914070-58914089 None:intergenic 35.0%
TTATGTCGGGTTCGAAATAA+AGG - chr2_4:58914192-58914211 Msa0338560:CDS 35.0%
! AATGGTATGTTTGGTTCACT+AGG + chr2_4:58914255-58914274 None:intergenic 35.0%
GGTAGGTTTAATGGTATGTT+TGG + chr2_4:58914264-58914283 None:intergenic 35.0%
ACATACCATTAAACCTACCA+AGG - chr2_4:58914265-58914284 Msa0338560:CDS 35.0%
CATACCATTAAACCTACCAA+GGG - chr2_4:58914266-58914285 Msa0338560:CDS 35.0%
ATACCATTAAACCTACCAAG+GGG - chr2_4:58914267-58914286 Msa0338560:CDS 35.0%
GATTGAAAGTTCACGTTTGT+AGG + chr2_4:58914303-58914322 None:intergenic 35.0%
ATCATAGCCTCTATTCTAGT+TGG - chr2_4:58914360-58914379 Msa0338560:intron 35.0%
!! AGCTTTTGAAAATCGATGCT+AGG + chr2_4:58914624-58914643 None:intergenic 35.0%
! TCAAATTACACTTTTCCACC+TGG - chr2_4:58913530-58913549 Msa0338560:CDS 35.0%
ACTATGAGTTCTTCATCAGA+AGG + chr2_4:58913569-58913588 None:intergenic 35.0%
! AACATACTTGGTAATTCCCA+TGG + chr2_4:58913671-58913690 None:intergenic 35.0%
TATGCAGAGAAGTCTTTGTT+TGG - chr2_4:58913781-58913800 Msa0338560:CDS 35.0%
!! GAAAGTATCCGAATGGATTA+AGG - chr2_4:58913839-58913858 Msa0338560:CDS 35.0%
!! CTATTTGGCCTTAATCCATT+CGG + chr2_4:58913850-58913869 None:intergenic 35.0%
TCATGTGGATCAAAGCATAT+AGG - chr2_4:58913925-58913944 Msa0338560:CDS 35.0%
TAATTGAAAACTTACCCGCA+TGG + chr2_4:58914070-58914089 None:intergenic 35.0%
TTATGTCGGGTTCGAAATAA+AGG - chr2_4:58914192-58914211 Msa0338560:CDS 35.0%
! AATGGTATGTTTGGTTCACT+AGG + chr2_4:58914255-58914274 None:intergenic 35.0%
GGTAGGTTTAATGGTATGTT+TGG + chr2_4:58914264-58914283 None:intergenic 35.0%
ACATACCATTAAACCTACCA+AGG - chr2_4:58914265-58914284 Msa0338560:CDS 35.0%
CATACCATTAAACCTACCAA+GGG - chr2_4:58914266-58914285 Msa0338560:CDS 35.0%
ATACCATTAAACCTACCAAG+GGG - chr2_4:58914267-58914286 Msa0338560:CDS 35.0%
GATTGAAAGTTCACGTTTGT+AGG + chr2_4:58914303-58914322 None:intergenic 35.0%
ATCATAGCCTCTATTCTAGT+TGG - chr2_4:58914360-58914379 Msa0338560:intron 35.0%
!! AGCTTTTGAAAATCGATGCT+AGG + chr2_4:58914624-58914643 None:intergenic 35.0%
TTGATGGAGGGACAACAAAA+TGG - chr2_4:58913500-58913519 Msa0338560:CDS 40.0%
TGAGTTCTTCATCAGAAGGA+TGG + chr2_4:58913565-58913584 None:intergenic 40.0%
ATTTCAGCTATAATCGACGC+TGG + chr2_4:58913629-58913648 None:intergenic 40.0%
! AGAGAAGTCTTTGTTTGGTG+AGG - chr2_4:58913786-58913805 Msa0338560:CDS 40.0%
! CTTTGTTTGGTGAGGAAGAA+TGG - chr2_4:58913794-58913813 Msa0338560:CDS 40.0%
TTATTCAGGTAGACCTCCTA+AGG - chr2_4:58913969-58913988 Msa0338560:CDS 40.0%
TATTCAGGTAGACCTCCTAA+GGG - chr2_4:58913970-58913989 Msa0338560:intron 40.0%
CAATCTGTCTTAACTCCCTT+AGG + chr2_4:58913988-58914007 None:intergenic 40.0%
CTAAGGGAGTTAAGACAGAT+TGG - chr2_4:58913986-58914005 Msa0338560:intron 40.0%
TCAAACTCAAAGGTTCCATG+CGG - chr2_4:58914052-58914071 Msa0338560:intron 40.0%
!! CATTTCTCTGCTTTTACAGC+TGG - chr2_4:58914158-58914177 Msa0338560:CDS 40.0%
TGGATGACTGGGTATTATGT+CGG - chr2_4:58914178-58914197 Msa0338560:CDS 40.0%
! ATAGCCTCTATTCTAGTTGG+AGG - chr2_4:58914363-58914382 Msa0338560:intron 40.0%
AACTCCTCCAACTAGAATAG+AGG + chr2_4:58914370-58914389 None:intergenic 40.0%
ACCTCCAACTGAGAATATGT+CGG - chr2_4:58914392-58914411 Msa0338560:intron 40.0%
AAACCCGACATATTCTCAGT+TGG + chr2_4:58914399-58914418 None:intergenic 40.0%
TTGATGGAGGGACAACAAAA+TGG - chr2_4:58913500-58913519 Msa0338560:CDS 40.0%
TGAGTTCTTCATCAGAAGGA+TGG + chr2_4:58913565-58913584 None:intergenic 40.0%
ATTTCAGCTATAATCGACGC+TGG + chr2_4:58913629-58913648 None:intergenic 40.0%
! AGAGAAGTCTTTGTTTGGTG+AGG - chr2_4:58913786-58913805 Msa0338560:CDS 40.0%
! CTTTGTTTGGTGAGGAAGAA+TGG - chr2_4:58913794-58913813 Msa0338560:CDS 40.0%
TTATTCAGGTAGACCTCCTA+AGG - chr2_4:58913969-58913988 Msa0338560:CDS 40.0%
TATTCAGGTAGACCTCCTAA+GGG - chr2_4:58913970-58913989 Msa0338560:intron 40.0%
CAATCTGTCTTAACTCCCTT+AGG + chr2_4:58913988-58914007 None:intergenic 40.0%
CTAAGGGAGTTAAGACAGAT+TGG - chr2_4:58913986-58914005 Msa0338560:intron 40.0%
TCAAACTCAAAGGTTCCATG+CGG - chr2_4:58914052-58914071 Msa0338560:intron 40.0%
!! CATTTCTCTGCTTTTACAGC+TGG - chr2_4:58914158-58914177 Msa0338560:CDS 40.0%
TGGATGACTGGGTATTATGT+CGG - chr2_4:58914178-58914197 Msa0338560:CDS 40.0%
! ATAGCCTCTATTCTAGTTGG+AGG - chr2_4:58914363-58914382 Msa0338560:intron 40.0%
AACTCCTCCAACTAGAATAG+AGG + chr2_4:58914370-58914389 None:intergenic 40.0%
ACCTCCAACTGAGAATATGT+CGG - chr2_4:58914392-58914411 Msa0338560:intron 40.0%
AAACCCGACATATTCTCAGT+TGG + chr2_4:58914399-58914418 None:intergenic 40.0%
! GAAGGATGGAATCTGAAACC+AGG + chr2_4:58913551-58913570 None:intergenic 45.0%
TTCGGATACTTTCGGTCTCT+CGG + chr2_4:58913832-58913851 None:intergenic 45.0%
!! AGAGACCGAAAGTATCCGAA+TGG - chr2_4:58913832-58913851 Msa0338560:CDS 45.0%
CCTGAAGCTGCTGTTCTATT+TGG + chr2_4:58913865-58913884 None:intergenic 45.0%
CCAAATAGAACAGCAGCTTC+AGG - chr2_4:58913862-58913881 Msa0338560:CDS 45.0%
TCTGTCTTAACTCCCTTAGG+AGG + chr2_4:58913985-58914004 None:intergenic 45.0%
CAAACTCAAAGGTTCCATGC+GGG - chr2_4:58914053-58914072 Msa0338560:intron 45.0%
! TGCTTTTACAGCTGGATGAC+TGG - chr2_4:58914166-58914185 Msa0338560:CDS 45.0%
! GCTTTTACAGCTGGATGACT+GGG - chr2_4:58914167-58914186 Msa0338560:CDS 45.0%
GGATGACTGGGTATTATGTC+GGG - chr2_4:58914179-58914198 Msa0338560:CDS 45.0%
TCACCCCTTGGTAGGTTTAA+TGG + chr2_4:58914273-58914292 None:intergenic 45.0%
CCTCCAACTGAGAATATGTC+GGG - chr2_4:58914393-58914412 Msa0338560:intron 45.0%
ATGTCGGGTTTGAGCGTTAA+TGG - chr2_4:58914408-58914427 Msa0338560:intron 45.0%
! GAAGGATGGAATCTGAAACC+AGG + chr2_4:58913551-58913570 None:intergenic 45.0%
TTCGGATACTTTCGGTCTCT+CGG + chr2_4:58913832-58913851 None:intergenic 45.0%
!! AGAGACCGAAAGTATCCGAA+TGG - chr2_4:58913832-58913851 Msa0338560:CDS 45.0%
CCTGAAGCTGCTGTTCTATT+TGG + chr2_4:58913865-58913884 None:intergenic 45.0%
CCAAATAGAACAGCAGCTTC+AGG - chr2_4:58913862-58913881 Msa0338560:CDS 45.0%
TCTGTCTTAACTCCCTTAGG+AGG + chr2_4:58913985-58914004 None:intergenic 45.0%
CAAACTCAAAGGTTCCATGC+GGG - chr2_4:58914053-58914072 Msa0338560:intron 45.0%
! TGCTTTTACAGCTGGATGAC+TGG - chr2_4:58914166-58914185 Msa0338560:CDS 45.0%
! GCTTTTACAGCTGGATGACT+GGG - chr2_4:58914167-58914186 Msa0338560:CDS 45.0%
GGATGACTGGGTATTATGTC+GGG - chr2_4:58914179-58914198 Msa0338560:CDS 45.0%
TCACCCCTTGGTAGGTTTAA+TGG + chr2_4:58914273-58914292 None:intergenic 45.0%
CCTCCAACTGAGAATATGTC+GGG - chr2_4:58914393-58914412 Msa0338560:intron 45.0%
ATGTCGGGTTTGAGCGTTAA+TGG - chr2_4:58914408-58914427 Msa0338560:intron 45.0%
! GGATGGAATCTGAAACCAGG+TGG + chr2_4:58913548-58913567 None:intergenic 50.0%
GCTATAATCGACGCTGGAAG+TGG + chr2_4:58913623-58913642 None:intergenic 50.0%
GAACAGCAGCTTCAGGATAC+TGG - chr2_4:58913869-58913888 Msa0338560:CDS 50.0%
AGCAGCTTCAGGATACTGGA+AGG - chr2_4:58913873-58913892 Msa0338560:CDS 50.0%
TCAGGATACTGGAAGGCAAC+TGG - chr2_4:58913880-58913899 Msa0338560:CDS 50.0%
CCCGACATATTCTCAGTTGG+AGG + chr2_4:58914396-58914415 None:intergenic 50.0%
! GGATGGAATCTGAAACCAGG+TGG + chr2_4:58913548-58913567 None:intergenic 50.0%
GCTATAATCGACGCTGGAAG+TGG + chr2_4:58913623-58913642 None:intergenic 50.0%
GAACAGCAGCTTCAGGATAC+TGG - chr2_4:58913869-58913888 Msa0338560:CDS 50.0%
AGCAGCTTCAGGATACTGGA+AGG - chr2_4:58913873-58913892 Msa0338560:CDS 50.0%
TCAGGATACTGGAAGGCAAC+TGG - chr2_4:58913880-58913899 Msa0338560:CDS 50.0%
CCCGACATATTCTCAGTTGG+AGG + chr2_4:58914396-58914415 None:intergenic 50.0%
GGCGTTCTTCACCCCTTGGT+AGG + chr2_4:58914281-58914300 None:intergenic 60.0%
! GTAGGGCGTTCTTCACCCCT+TGG + chr2_4:58914285-58914304 None:intergenic 60.0%
GGCGTTCTTCACCCCTTGGT+AGG + chr2_4:58914281-58914300 None:intergenic 60.0%
! GTAGGGCGTTCTTCACCCCT+TGG + chr2_4:58914285-58914304 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 58913500 58914665 58913500 ID=Msa0338560;Name=Msa0338560
chr2_4 mRNA 58913500 58914665 58913500 ID=Msa0338560-mRNA-1;Parent=Msa0338560;Name=Msa0338560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|319
chr2_4 exon 58914482 58914665 58914482 ID=Msa0338560-mRNA-1:exon:18244;Parent=Msa0338560-mRNA-1
chr2_4 exon 58914091 58914377 58914091 ID=Msa0338560-mRNA-1:exon:18243;Parent=Msa0338560-mRNA-1
chr2_4 exon 58913500 58913988 58913500 ID=Msa0338560-mRNA-1:exon:18242;Parent=Msa0338560-mRNA-1
chr2_4 CDS 58914482 58914665 58914482 ID=Msa0338560-mRNA-1:cds;Parent=Msa0338560-mRNA-1
chr2_4 CDS 58914091 58914377 58914091 ID=Msa0338560-mRNA-1:cds;Parent=Msa0338560-mRNA-1
chr2_4 CDS 58913500 58913988 58913500 ID=Msa0338560-mRNA-1:cds;Parent=Msa0338560-mRNA-1
Gene Sequence

>Msa0338560

TTGATGGAGGGACAACAAAATGGATCCAAATCAAATTACACTTTTCCACCTGGTTTCAGATTCCATCCTTCTGATGAAGAACTCATAGTTCATTACTTGCAAAACAAAATCAAATCGCGTCCACTTCCAGCGTCGATTATAGCTGAAATTGATCTCTATAAGTATAATCCATGGGAATTACCAAAGAAGTCTTTGTTTGGTGAGGAAGAATGGTATTTCTTTAGTCCGAGAGACCGAAAGTATCCGAATGGATTAAGGCCAAATAGAACAGCAGCTTCAGGATACTGGAAGGCAACTGGAACTGATAAGCCAATAATTTCTTCATGTGGATCAAAGCATATAGGAGTGAAGAAATCTCTTGTGTTTTATTCAGGTAGACCTCCTAAGGGAGTTAAGACAGATTGGATCATGAATGAGTATAGATTGGTCGACACAACCACGAAATCATTCAAACTCAAAGGTTCCATGCGGCTGGATGACTGGGTATTATGTCGGGTTCGAAATAAAGGCTATTCATTGAAGAATTTATCTGAAAATCAAGAGAATCCTAGTGAACCAAACATACCATTAAACCTACCAAGGGGTGAAGAACGCCCTACAAACGTGAACTTTCAATCTGACATGATCAAAGATTATCAGTTCAAAGACTATCAGATCATAGCCTCTATTCTAGTTGGAGGAGTTATACCTCCAACTGAGAATATGTCGGGTTTGAGCGTTAATGGAAGCAAATGCAACAACATAACTTCAGTTTCTGAAGAAGGTTTCAATAAAGTGAATTCTCAAACTAAAATCCCTTCTTTAGAATGTTACTTCAATCCACTTAAAAGAAAATCTAATGAGGATGATGATCAGTTTGAACATCTCATTTCTTTTAACAGCAAGTTCAACACTGAGAACAAATTAGACAAATCTCCTAGCATCGATTTTCAAAAGCTAAACGAATTTACCTTTACATAA
Protein sequence

>Msa0338560

LMEGQQNGSKSNYTFPPGFRFHPSDEELIVHYLQNKIKSRPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGLRPNRTAASGYWKATGTDKPIISSCGSKHIGVKKSLVFYSGRPPKGVKTDWIMNEYRLVDTTTKSFKLKGSMRLDDWVLCRVRNKGYSLKNLSENQENPSEPNIPLNLPRGEERPTNVNFQSDMIKDYQFKDYQIIASILVGGVIPPTENMSGLSVNGSKCNNITSVSEEGFNKVNSQTKIPSLECYFNPLKRKSNEDDDQFEHLISFNSKFNTENKLDKSPSIDFQKLNEFTFT*