Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0340320 | XP_003597476.1 | 69.231 | 156 | 44 | 4 | 642 | 796 | 467 | 619 | 5.39e-59 | 223 |
Msa0340320 | XP_003597476.1 | 80.000 | 50 | 10 | 0 | 592 | 641 | 28 | 77 | 3.17e-11 | 79.7 |
Msa0340320 | XP_003597476.1 | 87.642 | 615 | 32 | 6 | 1 | 579 | 1 | 607 | 0.0 | 1050 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0340320 | sp|O23116|EIL3_ARATH | 55.962 | 520 | 197 | 9 | 1 | 510 | 1 | 498 | 8.85e-175 | 517 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0340320 | G7IUG2 | 69.231 | 156 | 44 | 4 | 642 | 796 | 467 | 619 | 2.58e-59 | 223 |
Msa0340320 | G7IUG2 | 80.000 | 50 | 10 | 0 | 592 | 641 | 28 | 77 | 1.51e-11 | 79.7 |
Msa0340320 | G7IUG2 | 87.642 | 615 | 32 | 6 | 1 | 579 | 1 | 607 | 0.0 | 1050 |
Gene ID | Type | Classification |
---|---|---|
Msa0340320 | TF | EIL |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0264850 | Msa0340320 | 0.821139 | 4.731191e-53 | -8.615850e-47 |
Msa0340320 | Msa0828260 | 0.937255 | 4.661365e-98 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0340320 | MtrunA17_Chr2g0329151 | 87.642 | 615 | 32 | 6 | 1 | 579 | 1 | 607 | 0.0 | 1050 |
Msa0340320 | MtrunA17_Chr2g0329151 | 69.231 | 156 | 44 | 4 | 642 | 796 | 467 | 619 | 4.96e-63 | 223 |
Msa0340320 | MtrunA17_Chr2g0329151 | 80.000 | 50 | 10 | 0 | 592 | 641 | 28 | 77 | 2.91e-15 | 79.7 |
Msa0340320 | MtrunA17_Chr5g0440591 | 63.312 | 308 | 102 | 4 | 24 | 329 | 35 | 333 | 1.92e-130 | 402 |
Msa0340320 | MtrunA17_Chr3g0118361 | 63.946 | 294 | 92 | 4 | 39 | 330 | 53 | 334 | 3.61e-123 | 383 |
Msa0340320 | MtrunA17_Chr2g0329141 | 89.418 | 189 | 13 | 3 | 608 | 796 | 1 | 182 | 5.17e-114 | 343 |
Msa0340320 | MtrunA17_Chr2g0329141 | 59.124 | 137 | 41 | 4 | 453 | 579 | 39 | 170 | 2.53e-42 | 152 |
Msa0340320 | MtrunA17_Chr3g0124291 | 58.238 | 261 | 94 | 5 | 35 | 288 | 29 | 281 | 5.23e-97 | 308 |
Msa0340320 | MtrunA17_Chr8g0382561 | 56.716 | 268 | 94 | 6 | 32 | 288 | 16 | 272 | 2.45e-92 | 296 |
Msa0340320 | MtrunA17_Chr6g0473191 | 59.000 | 200 | 79 | 2 | 94 | 290 | 1 | 200 | 6.45e-78 | 253 |
Msa0340320 | MtrunA17_Chr6g0476291 | 58.500 | 200 | 80 | 2 | 94 | 290 | 1 | 200 | 2.27e-77 | 251 |
Msa0340320 | MtrunA17_Chr6g0476301 | 58.500 | 200 | 80 | 2 | 94 | 290 | 1 | 200 | 3.44e-77 | 254 |
Msa0340320 | MtrunA17_Chr3g0080401 | 55.882 | 204 | 78 | 3 | 94 | 290 | 1 | 199 | 6.70e-75 | 246 |
Msa0340320 | MtrunA17_Chr7g0260281 | 55.385 | 65 | 29 | 0 | 83 | 147 | 1 | 65 | 8.94e-19 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0340320 | AT1G73730.1 | 55.962 | 520 | 197 | 9 | 1 | 510 | 1 | 498 | 8.99e-176 | 517 |
Msa0340320 | AT1G73730.2 | 56.660 | 503 | 186 | 9 | 18 | 510 | 6 | 486 | 2.83e-173 | 510 |
Msa0340320 | AT3G20770.1 | 63.072 | 306 | 102 | 4 | 24 | 327 | 35 | 331 | 9.47e-127 | 393 |
Msa0340320 | AT2G27050.1 | 67.778 | 270 | 81 | 4 | 25 | 290 | 36 | 303 | 4.58e-126 | 390 |
Msa0340320 | AT5G10120.1 | 55.849 | 265 | 110 | 3 | 29 | 288 | 14 | 276 | 2.62e-94 | 303 |
Msa0340320 | AT5G21120.3 | 49.691 | 324 | 136 | 8 | 31 | 340 | 41 | 351 | 6.22e-89 | 290 |
Msa0340320 | AT5G21120.1 | 49.691 | 324 | 136 | 8 | 31 | 340 | 41 | 351 | 6.22e-89 | 290 |
Msa0340320 | AT5G21120.2 | 49.691 | 324 | 136 | 8 | 31 | 340 | 48 | 358 | 7.14e-89 | 290 |
Msa0340320 | AT5G65100.1 | 52.190 | 274 | 112 | 4 | 33 | 288 | 33 | 305 | 4.34e-88 | 289 |
Find 216 sgRNAs with CRISPR-Local
Find 567 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATTCTCTGGTTGCCTAAT+TGG | 0.150692 | 2_4:-61697516 | None:intergenic |
ACTAACATGTCATTTGATTT+TGG | 0.165378 | 2_4:+61703430 | Msa0340320:CDS |
CCATTCTGTGGCTGCCTAAT+TGG | 0.194936 | 2_4:-61703292 | None:intergenic |
TGCAAACAACATAGTTTCTT+TGG | 0.197966 | 2_4:+61703099 | Msa0340320:CDS |
GGATCACCATTATTAGATTT+TGG | 0.201596 | 2_4:+61697642 | Msa0340320:CDS |
CTTTGCGATGCGATTCAATA+AGG | 0.224438 | 2_4:-61694926 | None:intergenic |
ATGGGTGAACTCGTTGAAAT+TGG | 0.238500 | 2_4:+61694976 | Msa0340320:CDS |
ATATTCGGCAGTTTACTTCT+AGG | 0.240085 | 2_4:-61697072 | None:intergenic |
GGCCCCTCATGTCTTATTTC+CGG | 0.240962 | 2_4:-61697180 | None:intergenic |
AAAATGAAAGGAACCCAAAA+AGG | 0.250888 | 2_4:-61694850 | None:intergenic |
AAGTCATGTGGTTTCTTATA+AGG | 0.251269 | 2_4:-61696556 | None:intergenic |
AGAGATTGAAGTTGAAGATT+TGG | 0.271801 | 2_4:+61702946 | Msa0340320:CDS |
CATGAGTCAGTTCATTTATC+AGG | 0.278769 | 2_4:+61697246 | Msa0340320:CDS |
GTTGAAATTGGAGCTGATAT+TGG | 0.286718 | 2_4:+61694988 | Msa0340320:CDS |
AGACAGGAGCAATCAGTTTA+TGG | 0.290050 | 2_4:+61696900 | Msa0340320:CDS |
GACCATATTCCGCGACTCTA+AGG | 0.291033 | 2_4:-61703210 | None:intergenic |
TCAGCTTCATGAGGCATAAC+AGG | 0.297998 | 2_4:-61697402 | None:intergenic |
AGAGATTGAGGCAGAAGATT+TGG | 0.298365 | 2_4:+61695982 | Msa0340320:CDS |
CGGCAAAGGAAAGTTCAATT+TGG | 0.299516 | 2_4:+61696692 | Msa0340320:CDS |
GGCCCATGAAATCATCTAAA+AGG | 0.309800 | 2_4:-61703483 | None:intergenic |
CAAACCTATCCAGCTCGTTT+TGG | 0.310243 | 2_4:-61703396 | None:intergenic |
GTTCACCCATGAATGAAAAT+TGG | 0.310705 | 2_4:-61694963 | None:intergenic |
AACCCATGATATCATCAAAA+AGG | 0.311917 | 2_4:-61697695 | None:intergenic |
GCAGGTCTTGGAGTGTGCTC+TGG | 0.315110 | 2_4:-61696375 | None:intergenic |
CCAAACCTATCCAGCTCGTT+TGG | 0.316285 | 2_4:-61697621 | None:intergenic |
ACCCGAGCGTTGCATCTTGC+AGG | 0.344551 | 2_4:-61696393 | None:intergenic |
TCGTCTCTCTCATTCATATT+CGG | 0.345135 | 2_4:-61697087 | None:intergenic |
ATCATTTCATCGTCACTCAT+AGG | 0.349939 | 2_4:-61703505 | None:intergenic |
GAACGTGGTCGTTTCTTCCT+AGG | 0.356496 | 2_4:-61696988 | None:intergenic |
TCTTAGCTCGATCGGAATCT+TGG | 0.364311 | 2_4:-61696960 | None:intergenic |
TTGAAATTGGAGCTGATATT+GGG | 0.378190 | 2_4:+61694989 | Msa0340320:CDS |
AAAACTCCAAAATCTAATAA+TGG | 0.379865 | 2_4:-61697648 | None:intergenic |
CCGGGTGCTGTTACATGAAC+TGG | 0.385720 | 2_4:-61697279 | None:intergenic |
GCGTTGCATCTTGCAGGTCT+TGG | 0.388206 | 2_4:-61696387 | None:intergenic |
TTGATGTTGCCCATCCTGAC+TGG | 0.393798 | 2_4:-61697460 | None:intergenic |
GAGGAAATATCCATTGGAAA+AGG | 0.394290 | 2_4:+61696456 | Msa0340320:CDS |
GACCTTAGAGTCGCGGAATA+TGG | 0.394312 | 2_4:+61703208 | Msa0340320:CDS |
TTATCAGAGGAACCACTAAC+TGG | 0.402423 | 2_4:-61696232 | None:intergenic |
CTCCGCCTTGGTGGCCCACC+GGG | 0.404229 | 2_4:+61696485 | Msa0340320:CDS |
GCAGCAGCATCAGCATCTGC+AGG | 0.404522 | 2_4:+61703246 | Msa0340320:CDS |
AAGAAAAGGTGAAGTTTGAT+AGG | 0.411593 | 2_4:+61696272 | Msa0340320:CDS |
GAGGGGCCAAGTCATCTATC+TGG | 0.415007 | 2_4:+61697195 | Msa0340320:CDS |
CCTCCGCCTTGGTGGCCCAC+CGG | 0.415149 | 2_4:+61696484 | Msa0340320:CDS |
ATAGTTATTGCAGCATTCTC+TGG | 0.415425 | 2_4:-61697528 | None:intergenic |
AAGGAAAGTTCAATTTGGTT+GGG | 0.416475 | 2_4:+61696697 | Msa0340320:CDS |
GATAATAGAGAGAGAAAGCT+AGG | 0.418628 | 2_4:-61694779 | None:intergenic |
TCACTGTTCGCGGCGGGACC+AGG | 0.419875 | 2_4:-61697492 | None:intergenic |
CAAAACGAGCTGGATAGGTT+TGG | 0.420296 | 2_4:+61703397 | Msa0340320:CDS |
TGCTCTGGGAGTTCCCATTT+CGG | 0.420685 | 2_4:-61696360 | None:intergenic |
CCAAACGAGCTGGATAGGTT+TGG | 0.422592 | 2_4:+61697621 | Msa0340320:CDS |
GAGGCCGAAAATAACCGAAA+TGG | 0.427774 | 2_4:+61696346 | Msa0340320:CDS |
CCAGGAACTACAGAAATTCA+AGG | 0.431365 | 2_4:+61697870 | Msa0340320:intron |
ATCAATGTTCACGGCTGGGC+TGG | 0.431477 | 2_4:-61703269 | None:intergenic |
GCAGCTTCATGTGGCATGTC+AGG | 0.432094 | 2_4:-61703175 | None:intergenic |
CCGCGAACAGTGAACCAATT+AGG | 0.435891 | 2_4:+61697502 | Msa0340320:CDS |
CCTAATTGGTTCACTGTTCG+CGG | 0.440195 | 2_4:-61697502 | None:intergenic |
TCATACTTGGCTATGGCTGC+AGG | 0.444642 | 2_4:-61696301 | None:intergenic |
CGACCACCAATCTTCATTCC+CGG | 0.445023 | 2_4:-61696503 | None:intergenic |
CAGGTCTTGGAGTGTGCTCT+GGG | 0.447142 | 2_4:-61696374 | None:intergenic |
CTGTTTCTTCTAAGGAAGAC+AGG | 0.448155 | 2_4:+61696884 | Msa0340320:intron |
TACAATCCAGTCACAAGATA+TGG | 0.449117 | 2_4:+61697435 | Msa0340320:CDS |
TATTAGATATCACAATATTC+CGG | 0.450502 | 2_4:+61695940 | Msa0340320:CDS |
TTTGCGATGCGATTCAATAA+GGG | 0.451801 | 2_4:-61694925 | None:intergenic |
CAAACCTATCCAGCTCGTTT+GGG | 0.454172 | 2_4:-61697620 | None:intergenic |
GAGGTGCCAGTTCATTTATC+AGG | 0.455057 | 2_4:+61697222 | Msa0340320:CDS |
AAAGGAAAGTTCAATTTGGT+TGG | 0.458921 | 2_4:+61696696 | Msa0340320:CDS |
AAGATTTGGAGAGGCGGATG+TGG | 0.460361 | 2_4:+61695996 | Msa0340320:CDS |
CACATCTTCTTCAAGTCATG+TGG | 0.464103 | 2_4:-61696568 | None:intergenic |
TCACCTTTCATATTTGCTAC+AGG | 0.465634 | 2_4:-61703328 | None:intergenic |
GGCCCACCGGGAATGAAGAT+TGG | 0.471569 | 2_4:+61696497 | Msa0340320:CDS |
ATTGGATCAATGTTCACGGC+TGG | 0.473619 | 2_4:-61703274 | None:intergenic |
TCGCGAGTTATCTGATGGTT+CGG | 0.474239 | 2_4:-61696926 | None:intergenic |
AGTAGCGATAACGGTACGTC+TGG | 0.478350 | 2_4:+61696757 | Msa0340320:CDS |
AAGACACTCTGCTTCATACT+TGG | 0.479673 | 2_4:-61696314 | None:intergenic |
CCGTGAACATTGATCCAATT+AGG | 0.480278 | 2_4:+61703278 | Msa0340320:CDS |
AGGCCGAAAATAACCGAAAT+GGG | 0.482158 | 2_4:+61696347 | Msa0340320:CDS |
TCACCATTCATATTTGCTGC+AGG | 0.483300 | 2_4:-61697552 | None:intergenic |
CGCGGAATATGGTCCTCGTC+AGG | 0.486143 | 2_4:+61703219 | Msa0340320:CDS |
AGGGTGTTCCTCCGCCTTGG+TGG | 0.489757 | 2_4:+61696476 | Msa0340320:CDS |
CCAGTTCATGTAACAGCACC+CGG | 0.490378 | 2_4:+61697279 | Msa0340320:CDS |
AAAAGGGTGTTCCTCCGCCT+TGG | 0.490659 | 2_4:+61696473 | Msa0340320:CDS |
TCATTTCATCGTCACTCATA+GGG | 0.491187 | 2_4:-61703504 | None:intergenic |
AGGAAATATCCATTGGAAAA+GGG | 0.497233 | 2_4:+61696457 | Msa0340320:CDS |
CATTCCAAAACGAGCTGGAT+AGG | 0.497347 | 2_4:+61703392 | Msa0340320:CDS |
CACAAGATATGGTCCCAGTC+AGG | 0.497696 | 2_4:+61697446 | Msa0340320:CDS |
ATTGGTTCACTGTTCGCGGC+GGG | 0.497840 | 2_4:-61697498 | None:intergenic |
AAGATTTGGAGAGGCGAATG+TGG | 0.499638 | 2_4:+61702960 | Msa0340320:CDS |
CATTCCCAAACGAGCTGGAT+AGG | 0.500944 | 2_4:+61697616 | Msa0340320:CDS |
TAAGTACATGCTGAAGCTCA+TGG | 0.501457 | 2_4:+61696156 | Msa0340320:CDS |
TCATCACTGACATCTTTCTC+CGG | 0.504020 | 2_4:-61695959 | None:intergenic |
AAGAACACCAGTTGGCATAT+CGG | 0.504528 | 2_4:-61696785 | None:intergenic |
ATTTCATTGTCAGATTGTGC+TGG | 0.504859 | 2_4:-61697036 | None:intergenic |
GGAATTACCGATATGCCAAC+TGG | 0.505544 | 2_4:+61696778 | Msa0340320:CDS |
ACCTGCAAGATGCAACGCTC+GGG | 0.506370 | 2_4:+61696392 | Msa0340320:CDS |
TCTTGTGCTTGAGACTGCAT+TGG | 0.507375 | 2_4:-61703058 | None:intergenic |
AGGAAAGTTCAATTTGGTTG+GGG | 0.508259 | 2_4:+61696698 | Msa0340320:CDS |
TAGAGCTTGGTGGAAAGAAA+AGG | 0.512695 | 2_4:+61696258 | Msa0340320:CDS |
GTCGAGAAGAAGCTCTCATT+AGG | 0.512866 | 2_4:+61696728 | Msa0340320:CDS |
CTGATAACATTAGAGCTTGG+TGG | 0.517273 | 2_4:+61696248 | Msa0340320:CDS |
TGTCAGTGATGAAGAGATTG+AGG | 0.518821 | 2_4:+61695970 | Msa0340320:CDS |
TCATGTCCTGATAAATGAAC+TGG | 0.521338 | 2_4:-61697228 | None:intergenic |
GGAAGAAACGACCACGTTCG+AGG | 0.522146 | 2_4:+61696992 | Msa0340320:CDS |
TCCTCAGAGGAAATATCCAT+TGG | 0.525115 | 2_4:+61696450 | Msa0340320:CDS |
CTGGGACCATATCTTGTGAC+TGG | 0.525198 | 2_4:-61697441 | None:intergenic |
GCTAGCAACTATGATGTTGA+TGG | 0.525679 | 2_4:+61696841 | Msa0340320:CDS |
CCTAATTGGATCAATGTTCA+CGG | 0.526394 | 2_4:-61703278 | None:intergenic |
CTCTGCTTCATACTTGGCTA+TGG | 0.528334 | 2_4:-61696308 | None:intergenic |
AAATGTCGAGGGCACAAGAT+GGG | 0.530650 | 2_4:+61696128 | Msa0340320:CDS |
GAGAAGGGAAAACCAGTTAG+TGG | 0.532079 | 2_4:+61696220 | Msa0340320:CDS |
TCAAATGACATGTTAGTGAT+TGG | 0.532346 | 2_4:-61703424 | None:intergenic |
GATGAAATGATAAAGTACTT+TGG | 0.535924 | 2_4:+61703517 | Msa0340320:CDS |
AAATGATAAAGTACTTTGGC+GGG | 0.539572 | 2_4:+61703521 | Msa0340320:CDS |
TCTAAAAGGAATGGCGGTGA+TGG | 0.540263 | 2_4:-61703469 | None:intergenic |
AACAGAACCAACACCATCAT+CGG | 0.547221 | 2_4:-61696866 | None:intergenic |
TGCTGCTGCCCCTCCTGACG+AGG | 0.548404 | 2_4:-61703232 | None:intergenic |
TTCCTTCGCGAGTTATCTGA+TGG | 0.548644 | 2_4:-61696931 | None:intergenic |
AGGCAGCCTAGTAGCGATAA+CGG | 0.550005 | 2_4:+61696748 | Msa0340320:CDS |
AAAAGGAATGGCGGTGATGG+TGG | 0.550954 | 2_4:-61703466 | None:intergenic |
GAAATGATAAAGTACTTTGG+CGG | 0.553080 | 2_4:+61703520 | Msa0340320:CDS |
CAACATCAACATCTGCAGCC+TGG | 0.553510 | 2_4:+61697474 | Msa0340320:CDS |
CCGGTGGGCCACCAAGGCGG+AGG | 0.554118 | 2_4:-61696484 | None:intergenic |
GATGTTGATGGTACCGATGA+TGG | 0.554779 | 2_4:+61696853 | Msa0340320:CDS |
AGATATGGTCCCAGTCAGGA+TGG | 0.555307 | 2_4:+61697450 | Msa0340320:CDS |
AAAAGGAATGATGGTGATGG+TGG | 0.555478 | 2_4:-61697678 | None:intergenic |
TTGGATCAATGTTCACGGCT+GGG | 0.555605 | 2_4:-61703273 | None:intergenic |
TTTGGAGAGGCGGATGTGGA+AGG | 0.556184 | 2_4:+61696000 | Msa0340320:CDS |
AGACACATTCCCAAACGAGC+TGG | 0.557596 | 2_4:+61697611 | Msa0340320:CDS |
TTGCTAGCACTACTAGCAGC+AGG | 0.559279 | 2_4:-61696826 | None:intergenic |
CCACCGGGAATGAAGATTGG+TGG | 0.559941 | 2_4:+61696500 | Msa0340320:CDS |
CTTCATGTGGCATGTCAGGA+GGG | 0.560754 | 2_4:-61703171 | None:intergenic |
AGACGCATTCCAAAACGAGC+TGG | 0.561283 | 2_4:+61703387 | Msa0340320:CDS |
CTTGAAGAAGATGTGGAAAG+TGG | 0.561365 | 2_4:+61696576 | Msa0340320:CDS |
CCTCTGATAACATTAGAGCT+TGG | 0.561811 | 2_4:+61696245 | Msa0340320:CDS |
CAGCTTCATGAGGCATAACA+GGG | 0.562451 | 2_4:-61697401 | None:intergenic |
TTTGGAGAGGCGAATGTGGA+AGG | 0.562980 | 2_4:+61702964 | Msa0340320:CDS |
TGCAAACAGTATGATTTCCT+CGG | 0.564591 | 2_4:+61697326 | Msa0340320:intron |
GACCTGCAAGATGCAACGCT+CGG | 0.564854 | 2_4:+61696391 | Msa0340320:CDS |
ATGAAAGGTGACGAAATCAC+TGG | 0.565348 | 2_4:+61703340 | Msa0340320:CDS |
TGATGTTGCCCATCCTGACT+GGG | 0.565505 | 2_4:-61697459 | None:intergenic |
CCAATTAGGCAGCCACAGAA+TGG | 0.567546 | 2_4:+61703292 | Msa0340320:CDS |
TGCAAGTGAGGGTAGTGCAA+TGG | 0.567879 | 2_4:-61703145 | None:intergenic |
AGGATCGTATCAAACTCAAA+AGG | 0.568104 | 2_4:+61696020 | Msa0340320:CDS |
ATGAAATCATCTAAAAGGAA+TGG | 0.569614 | 2_4:-61703478 | None:intergenic |
TTGAAGTTGAAGATTTGGAG+AGG | 0.571177 | 2_4:+61702951 | Msa0340320:CDS |
GTATGGAATCATTCCTGAGA+AGG | 0.572173 | 2_4:+61696204 | Msa0340320:CDS |
GGAATATGGTCCTCGTCAGG+AGG | 0.573065 | 2_4:+61703222 | Msa0340320:CDS |
AAAGCTCGTGGATTTGTGTA+TGG | 0.575890 | 2_4:+61696187 | Msa0340320:CDS |
CACATGACTTGAAGAAGATG+TGG | 0.577025 | 2_4:+61696569 | Msa0340320:CDS |
AGGTTGCTTCTTAGCTCGAT+CGG | 0.579443 | 2_4:-61696968 | None:intergenic |
CAGTTCATTTATCAGGACAC+GGG | 0.580228 | 2_4:+61697253 | Msa0340320:CDS |
TATGGAATCATTCCTGAGAA+GGG | 0.580239 | 2_4:+61696205 | Msa0340320:CDS |
CTTGTTGTTCGAATTCGTGA+AGG | 0.580530 | 2_4:+61697894 | Msa0340320:CDS |
TCCAATGGATATTTCCTCTG+AGG | 0.580696 | 2_4:-61696451 | None:intergenic |
GAATATGGTCCTCGTCAGGA+GGG | 0.581174 | 2_4:+61703223 | Msa0340320:CDS |
GCTTCATGTGGCATGTCAGG+AGG | 0.581231 | 2_4:-61703172 | None:intergenic |
AATGGATATTTCCTCTGAGG+AGG | 0.582773 | 2_4:-61696448 | None:intergenic |
TCGCTTCCAGATAGATGACT+TGG | 0.588209 | 2_4:-61697201 | None:intergenic |
ATGGAAGTGTGCAAAGCTCG+TGG | 0.588400 | 2_4:+61696175 | Msa0340320:CDS |
CCACCAATCTTCATTCCCGG+TGG | 0.588777 | 2_4:-61696500 | None:intergenic |
CCCTCATGTCTTATTTCCGG+CGG | 0.590753 | 2_4:-61697177 | None:intergenic |
TCAGTTCATTTATCAGGACA+CGG | 0.594222 | 2_4:+61697252 | Msa0340320:CDS |
ATGCCTGCAGCAAATATGAA+TGG | 0.596398 | 2_4:+61697549 | Msa0340320:CDS |
TCATGTGGTTTCTTATAAGG+AGG | 0.596463 | 2_4:-61696553 | None:intergenic |
GATGGTACCGATGATGGTGT+TGG | 0.596633 | 2_4:+61696859 | Msa0340320:CDS |
GGAAAGTTCAATTTGGTTGG+GGG | 0.600209 | 2_4:+61696699 | Msa0340320:CDS |
GCAAGACAAGATGACGGCAA+AGG | 0.603284 | 2_4:+61696678 | Msa0340320:CDS |
TAATCTTGACCTTAGAGTCG+CGG | 0.605222 | 2_4:+61703201 | Msa0340320:CDS |
TTCCCGGTGGGCCACCAAGG+CGG | 0.606722 | 2_4:-61696487 | None:intergenic |
TCATTCCCGGTGGGCCACCA+AGG | 0.607148 | 2_4:-61696490 | None:intergenic |
TTGAAGAAGATGTGGAAAGT+GGG | 0.608760 | 2_4:+61696577 | Msa0340320:CDS |
AAGGTGAAGTTTGATAGGAA+TGG | 0.608844 | 2_4:+61696277 | Msa0340320:CDS |
AAAATGTCGAGGGCACAAGA+TGG | 0.611433 | 2_4:+61696127 | Msa0340320:CDS |
AACTGAGAATAGTGCAGCGG+TGG | 0.612241 | 2_4:-61697372 | None:intergenic |
CCCTAGAGAAGCAAAAGCCG+AGG | 0.615253 | 2_4:+61696077 | Msa0340320:CDS |
CACCAATCTTCATTCCCGGT+GGG | 0.616240 | 2_4:-61696499 | None:intergenic |
AAAGTGTGTATATGAGTAGA+CGG | 0.616455 | 2_4:+61697349 | Msa0340320:CDS |
GATATGGTCCCAGTCAGGAT+GGG | 0.617269 | 2_4:+61697451 | Msa0340320:CDS |
ATGCCTGTAGCAAATATGAA+AGG | 0.618350 | 2_4:+61703325 | Msa0340320:CDS |
TTGGAAAACATGTATGTGAG+TGG | 0.619040 | 2_4:+61703118 | Msa0340320:CDS |
CCGCCGGAAATAAGACATGA+GGG | 0.619238 | 2_4:+61697177 | Msa0340320:CDS |
AATTGGTTCACTGTTCGCGG+CGG | 0.624847 | 2_4:-61697499 | None:intergenic |
TATCAAACTCAAAAGGCTCA+AGG | 0.625808 | 2_4:+61696027 | Msa0340320:CDS |
AATATGGTCCTCGTCAGGAG+GGG | 0.626121 | 2_4:+61703224 | Msa0340320:CDS |
CCAAGCTCTAATGTTATCAG+AGG | 0.626452 | 2_4:-61696245 | None:intergenic |
TCAAGAAGAAGAACACCAGT+TGG | 0.627033 | 2_4:-61696793 | None:intergenic |
ACTCATATACACACTTTCCG+AGG | 0.634311 | 2_4:-61697343 | None:intergenic |
AGGCAGAAGATTTGGAGAGG+CGG | 0.634433 | 2_4:+61695990 | Msa0340320:CDS |
GACGTACCGTTATCGCTACT+AGG | 0.635231 | 2_4:-61696754 | None:intergenic |
CTCGTAGGAAGAAAATGTCG+AGG | 0.637174 | 2_4:+61696116 | Msa0340320:CDS |
GCCGCCGGAAATAAGACATG+AGG | 0.637786 | 2_4:+61697176 | Msa0340320:CDS |
GCTGCACTTGACCTCGAACG+TGG | 0.640254 | 2_4:-61697003 | None:intergenic |
TTGAGGCAGAAGATTTGGAG+AGG | 0.640791 | 2_4:+61695987 | Msa0340320:CDS |
CAGTTCATGTAACAGCACCC+GGG | 0.645071 | 2_4:+61697280 | Msa0340320:CDS |
AGATTGTGCTGGTAATGTGT+CGG | 0.646269 | 2_4:-61697025 | None:intergenic |
TATCAAACTCCAAAGGCTCA+AGG | 0.648346 | 2_4:+61702991 | Msa0340320:CDS |
AAAACATGTATGTGAGTGGA+AGG | 0.649522 | 2_4:+61703122 | Msa0340320:CDS |
AGTCATCTGATCAAGCTCGT+AGG | 0.652332 | 2_4:+61696101 | Msa0340320:CDS |
TCGCACTTGAATCTACCTCA+TGG | 0.652796 | 2_4:+61696523 | Msa0340320:CDS |
AAGTCATCTATCTGGAAGCG+AGG | 0.655312 | 2_4:+61697203 | Msa0340320:CDS |
ATCGAGCTAAGAAGCAACCT+AGG | 0.657044 | 2_4:+61696971 | Msa0340320:CDS |
TGCAACTGAGAATAGTGCAG+CGG | 0.657420 | 2_4:-61697375 | None:intergenic |
AACCATCAGATAACTCGCGA+AGG | 0.657732 | 2_4:+61696929 | Msa0340320:CDS |
AGATTATAAGCAGCTTCATG+TGG | 0.658467 | 2_4:-61703184 | None:intergenic |
TCGTAGGAAGAAAATGTCGA+GGG | 0.660921 | 2_4:+61696117 | Msa0340320:CDS |
AAATCATCTAAAAGGAATGG+CGG | 0.661454 | 2_4:-61703475 | None:intergenic |
GCTTGATCAGATGACTGCCT+CGG | 0.661645 | 2_4:-61696094 | None:intergenic |
ATGCTTGCAAGACAAGATGA+CGG | 0.662559 | 2_4:+61696672 | Msa0340320:CDS |
ATAGTGATTGCACCATTCTG+TGG | 0.668976 | 2_4:-61703304 | None:intergenic |
AGATTATAATCAGCTTCATG+AGG | 0.669056 | 2_4:-61697411 | None:intergenic |
AACACTGTGATCCTCCTCAG+AGG | 0.669904 | 2_4:+61696437 | Msa0340320:CDS |
CGCCGGAAATAAGACATGAG+GGG | 0.670859 | 2_4:+61697178 | Msa0340320:CDS |
TAAGGAGGACTCTGACCATG+AGG | 0.682592 | 2_4:-61696538 | None:intergenic |
AGGATCGTATCAAACTCCAA+AGG | 0.690382 | 2_4:+61702984 | Msa0340320:CDS |
AGAGTGTCTTGCTATGAGCG+AGG | 0.692638 | 2_4:+61696327 | Msa0340320:CDS |
AAAGGTGACGAAATCACTGG+AGG | 0.696560 | 2_4:+61703343 | Msa0340320:CDS |
AGTTCATTTATCAGGACACG+GGG | 0.707481 | 2_4:+61697254 | Msa0340320:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTAAAGTTTTTAATTTTAT+AGG | - | chr2_4:61699168-61699187 | None:intergenic | 10.0% |
!!! | ATTTTAAAATTATCAAGTTT+CGG | + | chr2_4:61699453-61699472 | Msa0340320:intron | 10.0% |
!! | AAAAAAATTAATAGTAGTAT+TGG | - | chr2_4:61699889-61699908 | None:intergenic | 10.0% |
!!! | ATTTTATTTTTATTTTTGAG+AGG | + | chr2_4:61700244-61700263 | Msa0340320:intron | 10.0% |
!! | ATAATAATAATAGAAATCAT+AGG | - | chr2_4:61702408-61702427 | None:intergenic | 10.0% |
!!! | CTTTTATATTTTTTTTTTGT+AGG | + | chr2_4:61702548-61702567 | Msa0340320:intron | 10.0% |
!!! | AACAGTTATAAATTTTTATA+GGG | - | chr2_4:61702680-61702699 | None:intergenic | 10.0% |
!!! | AAACAGTTATAAATTTTTAT+AGG | - | chr2_4:61702681-61702700 | None:intergenic | 10.0% |
!! | AATTGAAAGAAAAAAATGAA+AGG | - | chr2_4:61694865-61694884 | None:intergenic | 15.0% |
!! | AAACATATTGATATGATAAT+GGG | - | chr2_4:61698040-61698059 | None:intergenic | 15.0% |
!! | ATTATCATATCAATATGTTT+GGG | + | chr2_4:61698040-61698059 | Msa0340320:intron | 15.0% |
!!! | AATATTTAGGTTAATTTCTT+TGG | + | chr2_4:61698098-61698117 | Msa0340320:intron | 15.0% |
!!! | ATATTTAGGTTAATTTCTTT+GGG | + | chr2_4:61698099-61698118 | Msa0340320:intron | 15.0% |
!!! | TAAAACATGTTTTTTATATC+TGG | - | chr2_4:61698379-61698398 | None:intergenic | 15.0% |
!! | CTTATGTATATAAAAGTTTA+TGG | + | chr2_4:61698812-61698831 | Msa0340320:intron | 15.0% |
!!! | AACTTGATAATTTTAAAATG+AGG | - | chr2_4:61699452-61699471 | None:intergenic | 15.0% |
!!! | GTTTTTTCTTTTAAAATTTG+TGG | + | chr2_4:61699487-61699506 | Msa0340320:intron | 15.0% |
!! | TATTAAGTACAAAAATAAGA+TGG | + | chr2_4:61699828-61699847 | Msa0340320:intron | 15.0% |
!!! | TCAAAAGTTGATAATTTAAT+AGG | + | chr2_4:61700172-61700191 | Msa0340320:intron | 15.0% |
!! | AAAAAAAAACTGTTCATTAA+GGG | - | chr2_4:61700305-61700324 | None:intergenic | 15.0% |
!!! | TTTTACAAATAGTTAAAAAG+TGG | + | chr2_4:61700589-61700608 | Msa0340320:intron | 15.0% |
!! | CTATTATATTACTATTATGA+TGG | - | chr2_4:61700779-61700798 | None:intergenic | 15.0% |
!! | ATAACAAAAAAAAAAAACGC+AGG | + | chr2_4:61694899-61694918 | Msa0340320:five_prime_UTR | 20.0% |
!!! | TATTCTGAGAAATTGAATTT+AGG | + | chr2_4:61695046-61695065 | Msa0340320:intron | 20.0% |
!!! | TGAATTTAGGTTTTTGTTTT+TGG | + | chr2_4:61695059-61695078 | Msa0340320:intron | 20.0% |
!!! | TGGTTTTTGTAAATTTTTTG+TGG | + | chr2_4:61695117-61695136 | Msa0340320:intron | 20.0% |
!!! | GGTTTTTGTAAATTTTTTGT+GGG | + | chr2_4:61695118-61695137 | Msa0340320:intron | 20.0% |
!! | ATTGTGTTTATGTGTTTATT+AGG | + | chr2_4:61695223-61695242 | Msa0340320:intron | 20.0% |
!!! | ATGTTTTGTGTGAAATTTTT+GGG | + | chr2_4:61695349-61695368 | Msa0340320:intron | 20.0% |
!! | TTGTTAAAGTGTAAAAATGT+CGG | + | chr2_4:61695382-61695401 | Msa0340320:intron | 20.0% |
!! | TTATTAGGGTAGAAAAAATA+AGG | + | chr2_4:61695417-61695436 | Msa0340320:intron | 20.0% |
!!! | ATGTGTTATGTGAAATTTTT+GGG | + | chr2_4:61695537-61695556 | Msa0340320:intron | 20.0% |
!!! | ACTTATCAAATAAGTTGAAA+TGG | - | chr2_4:61695811-61695830 | None:intergenic | 20.0% |
!!! | CAATTTATTTTATTGTTCTG+CGG | + | chr2_4:61695844-61695863 | Msa0340320:intron | 20.0% |
!! | TATTAGATATCACAATATTC+CGG | + | chr2_4:61695940-61695959 | Msa0340320:CDS | 20.0% |
!! | AAAACTCCAAAATCTAATAA+TGG | - | chr2_4:61697651-61697670 | None:intergenic | 20.0% |
!!! | AACATATTGATATGATAATG+GGG | - | chr2_4:61698039-61698058 | None:intergenic | 20.0% |
!! | CAAACATATTGATATGATAA+TGG | - | chr2_4:61698041-61698060 | None:intergenic | 20.0% |
!! | CATTATCATATCAATATGTT+TGG | + | chr2_4:61698039-61698058 | Msa0340320:intron | 20.0% |
!! | TTATCATATCAATATGTTTG+GGG | + | chr2_4:61698041-61698060 | Msa0340320:intron | 20.0% |
!! | ATGTAAATGTAACTATTGTT+GGG | + | chr2_4:61698068-61698087 | Msa0340320:intron | 20.0% |
!! | AATAAAATTATCAGTGTTTG+TGG | + | chr2_4:61698150-61698169 | Msa0340320:intron | 20.0% |
!! | ATACATGTAAGAATATAATG+AGG | + | chr2_4:61698703-61698722 | Msa0340320:intron | 20.0% |
!! | TACATGTAAGAATATAATGA+GGG | + | chr2_4:61698704-61698723 | Msa0340320:intron | 20.0% |
!! | TATATAAAAGTTTATGGTGT+TGG | + | chr2_4:61698818-61698837 | Msa0340320:intron | 20.0% |
!! | ATATAAAAGTTTATGGTGTT+GGG | + | chr2_4:61698819-61698838 | Msa0340320:intron | 20.0% |
!!! | CGAAAATAACATTTTTGATA+TGG | + | chr2_4:61699125-61699144 | Msa0340320:intron | 20.0% |
!!! | TTTTTTTTTCCCACAAAAAA+AGG | + | chr2_4:61699192-61699211 | Msa0340320:intron | 20.0% |
!! | AAAAAAAACTGTTCATTAAG+GGG | - | chr2_4:61700304-61700323 | None:intergenic | 20.0% |
!! | CAAAAAAAAACTGTTCATTA+AGG | - | chr2_4:61700306-61700325 | None:intergenic | 20.0% |
!!! | TTTCTTTAAAAACTCTTGTA+AGG | + | chr2_4:61700468-61700487 | Msa0340320:intron | 20.0% |
!!! | TTCTTTAAAAACTCTTGTAA+GGG | + | chr2_4:61700469-61700488 | Msa0340320:intron | 20.0% |
!! | AAACATTTGAGAATTGTAAA+TGG | + | chr2_4:61700498-61700517 | Msa0340320:intron | 20.0% |
!!! | ATGATTTTACTTATGTTGTT+AGG | - | chr2_4:61700561-61700580 | None:intergenic | 20.0% |
!! | AACAACATAAGTAAAATCAT+TGG | + | chr2_4:61700561-61700580 | Msa0340320:intron | 20.0% |
!!! | AATTTTTTCACATTTTCCTT+AGG | - | chr2_4:61700637-61700656 | None:intergenic | 20.0% |
!! | TAAGGAAAATGTGAAAAAAT+TGG | + | chr2_4:61700636-61700655 | Msa0340320:intron | 20.0% |
!! | TTTAAATGAAAGACTTTCTA+AGG | - | chr2_4:61700680-61700699 | None:intergenic | 20.0% |
!! | TATGAAAGATTAAGAAACTA+TGG | - | chr2_4:61700864-61700883 | None:intergenic | 20.0% |
!! | AAAAGATTACCTTTACTAAA+GGG | - | chr2_4:61701087-61701106 | None:intergenic | 20.0% |
!! | TAAAAGATTACCTTTACTAA+AGG | - | chr2_4:61701088-61701107 | None:intergenic | 20.0% |
!! | TTTGAAAATCTATATGCAAA+TGG | - | chr2_4:61701132-61701151 | None:intergenic | 20.0% |
!!! | AGATCATAGATTTTAAGATT+GGG | - | chr2_4:61701190-61701209 | None:intergenic | 20.0% |
!!! | AAGATCATAGATTTTAAGAT+TGG | - | chr2_4:61701191-61701210 | None:intergenic | 20.0% |
!! | GTCTTAAATTCAAAATATCA+AGG | + | chr2_4:61701452-61701471 | Msa0340320:intron | 20.0% |
!! | AAACAAAAAAATAGTATCTG+TGG | + | chr2_4:61701856-61701875 | Msa0340320:intron | 20.0% |
!! | GAAAATACATGCAAAAATAA+AGG | - | chr2_4:61701939-61701958 | None:intergenic | 20.0% |
!!! | TCAACTAAGTTTTTTGTTTT+TGG | + | chr2_4:61702486-61702505 | Msa0340320:intron | 20.0% |
!!! | CTATCGAATTTTTTCAACTT+CGG | - | chr2_4:61694818-61694837 | None:intergenic | 25.0% |
!! | TTTGTACCAATTTTCATTCA+TGG | + | chr2_4:61694957-61694976 | Msa0340320:exon | 25.0% |
!! | TTGTACCAATTTTCATTCAT+GGG | + | chr2_4:61694958-61694977 | Msa0340320:exon | 25.0% |
!!! | GTTTTGTGATTCTTTGTTAT+TGG | + | chr2_4:61695097-61695116 | Msa0340320:intron | 25.0% |
! | TGATCAAATCATGATTTAGT+TGG | + | chr2_4:61695200-61695219 | Msa0340320:intron | 25.0% |
!! | CATGTTTTGTGTGAAATTTT+TGG | + | chr2_4:61695348-61695367 | Msa0340320:intron | 25.0% |
!! | TGTTTTGTGTGAAATTTTTG+GGG | + | chr2_4:61695350-61695369 | Msa0340320:intron | 25.0% |
!!! | TAAAAATGTCGGTTTATTGT+CGG | + | chr2_4:61695393-61695412 | Msa0340320:intron | 25.0% |
! | ATTAAAACTTAGTGTGTGTT+TGG | + | chr2_4:61695440-61695459 | Msa0340320:intron | 25.0% |
!! | CATGTGTTATGTGAAATTTT+TGG | + | chr2_4:61695536-61695555 | Msa0340320:intron | 25.0% |
!! | TGTGTTATGTGAAATTTTTG+GGG | + | chr2_4:61695538-61695557 | Msa0340320:intron | 25.0% |
! | GGACTTTAATGTTGTTAAAT+TGG | + | chr2_4:61695559-61695578 | Msa0340320:intron | 25.0% |
! | TGTTAAATTGGAAAAGATGT+CGG | + | chr2_4:61695571-61695590 | Msa0340320:intron | 25.0% |
! | CGCAGAACAATAAAATAAAT+TGG | - | chr2_4:61695846-61695865 | None:intergenic | 25.0% |
!! | ATGAATGGTGATGAAATTAT+CGG | + | chr2_4:61697564-61697583 | Msa0340320:intron | 25.0% |
! | ATATCATCAAAAAGGAATGA+TGG | - | chr2_4:61697690-61697709 | None:intergenic | 25.0% |
!!! | ATTCCTTTTTGATGATATCA+TGG | + | chr2_4:61697692-61697711 | Msa0340320:CDS | 25.0% |
!!! | TTCCTTTTTGATGATATCAT+GGG | + | chr2_4:61697693-61697712 | Msa0340320:CDS | 25.0% |
! | ATTGAACAAAATTCAGACAT+CGG | - | chr2_4:61698010-61698029 | None:intergenic | 25.0% |
! | CATGTAAATGTAACTATTGT+TGG | + | chr2_4:61698067-61698086 | Msa0340320:intron | 25.0% |
! | GCAAAATATTAAAACAGCAT+AGG | - | chr2_4:61698179-61698198 | None:intergenic | 25.0% |
! | TATCAGGACATATGAAAAAA+TGG | - | chr2_4:61698211-61698230 | None:intergenic | 25.0% |
!!! | GATCACATTTCAACTTTTTT+AGG | + | chr2_4:61698420-61698439 | Msa0340320:intron | 25.0% |
! | AAAATTCAATGTACCCTTTA+GGG | + | chr2_4:61698469-61698488 | Msa0340320:intron | 25.0% |
! | TGACCATAACTAATTTGAAT+AGG | - | chr2_4:61698496-61698515 | None:intergenic | 25.0% |
! | TATATGTTCCTACTTTGATA+AGG | + | chr2_4:61698734-61698753 | Msa0340320:intron | 25.0% |
!!! | AAACAAATTTAGTTTTACCG+AGG | - | chr2_4:61699262-61699281 | None:intergenic | 25.0% |
!! | CTTTTACTCATTCAAGTAAT+TGG | + | chr2_4:61699423-61699442 | Msa0340320:intron | 25.0% |
!!! | CATCATATTTTTAATCTCTC+TGG | + | chr2_4:61699717-61699736 | Msa0340320:intron | 25.0% |
!! | ATTTTAAACGTACTCTGTTT+TGG | - | chr2_4:61699859-61699878 | None:intergenic | 25.0% |
! | AAAACAGAGTACGTTTAAAA+TGG | + | chr2_4:61699858-61699877 | Msa0340320:intron | 25.0% |
! | AAATAAAAGAAACGAAAACC+AGG | + | chr2_4:61699955-61699974 | Msa0340320:intron | 25.0% |
! | GCTTGATTAACTATTCATTA+AGG | - | chr2_4:61700345-61700364 | None:intergenic | 25.0% |
!! | CACATCTTCTAAAAGTAAAA+TGG | - | chr2_4:61700397-61700416 | None:intergenic | 25.0% |
! | ACGACATTTATTAAAACCTA+AGG | + | chr2_4:61700618-61700637 | Msa0340320:intron | 25.0% |
! | TCATCATAATAATGTCCTTT+AGG | + | chr2_4:61700706-61700725 | Msa0340320:intron | 25.0% |
! | GCTAAATGATACAATTATGA+TGG | - | chr2_4:61700744-61700763 | None:intergenic | 25.0% |
!! | AATTGTATCATTTAGCCTTT+AGG | + | chr2_4:61700748-61700767 | Msa0340320:intron | 25.0% |
!!! | GTTTTTTTTCCCTTTAGTAA+AGG | + | chr2_4:61701075-61701094 | Msa0340320:intron | 25.0% |
! | ACACTAATACTATTGGTAAA+TGG | - | chr2_4:61701364-61701383 | None:intergenic | 25.0% |
!! | TGCCTCATTTTCAAAAATTT+CGG | + | chr2_4:61702001-61702020 | Msa0340320:intron | 25.0% |
!! | CATACTTATTTCTCTTAATG+AGG | - | chr2_4:61702030-61702049 | None:intergenic | 25.0% |
! | CTCATTAAGAGAAATAAGTA+TGG | + | chr2_4:61702028-61702047 | Msa0340320:intron | 25.0% |
! | AAATCATCAATCTTCATAGA+TGG | + | chr2_4:61702125-61702144 | Msa0340320:intron | 25.0% |
! | AACAAAAAAATAGAAACCCT+AGG | - | chr2_4:61702379-61702398 | None:intergenic | 25.0% |
!! | TCGATGATGTATTTCATTTT+TGG | + | chr2_4:61702587-61702606 | Msa0340320:intron | 25.0% |
!! | ATATTTTGCTACAAAGAGAA+GGG | - | chr2_4:61702758-61702777 | None:intergenic | 25.0% |
!! | TATATTTTGCTACAAAGAGA+AGG | - | chr2_4:61702759-61702778 | None:intergenic | 25.0% |
!!! | TTGCTTATATTTTGTTTCGA+AGG | + | chr2_4:61702821-61702840 | Msa0340320:intron | 25.0% |
!!! | TGCTTATATTTTGTTTCGAA+GGG | + | chr2_4:61702822-61702841 | Msa0340320:intron | 25.0% |
! | GTAGTATATAATGAAATGCA+AGG | + | chr2_4:61702846-61702865 | Msa0340320:intron | 25.0% |
! | TCTTAGATATCACAATATAC+TGG | + | chr2_4:61702904-61702923 | Msa0340320:intron | 25.0% |
!!! | ACTAACATGTCATTTGATTT+TGG | + | chr2_4:61703430-61703449 | Msa0340320:CDS | 25.0% |
! | ATGAAATCATCTAAAAGGAA+TGG | - | chr2_4:61703481-61703500 | None:intergenic | 25.0% |
!! | ATTCCTTTTAGATGATTTCA+TGG | + | chr2_4:61703480-61703499 | Msa0340320:CDS | 25.0% |
!! | TTCCTTTTAGATGATTTCAT+GGG | + | chr2_4:61703481-61703500 | Msa0340320:CDS | 25.0% |
!! | GATGAAATGATAAAGTACTT+TGG | + | chr2_4:61703517-61703536 | Msa0340320:CDS | 25.0% |
! | AGCAAAATCAAAACCCTTTT+TGG | + | chr2_4:61694836-61694855 | Msa0340320:five_prime_UTR | 30.0% |
! | GCAAAATCAAAACCCTTTTT+GGG | + | chr2_4:61694837-61694856 | Msa0340320:five_prime_UTR | 30.0% |
AAATGAAAGGAACCCAAAAA+GGG | - | chr2_4:61694852-61694871 | None:intergenic | 30.0% | |
AAAATGAAAGGAACCCAAAA+AGG | - | chr2_4:61694853-61694872 | None:intergenic | 30.0% | |
TTGAAATTGGAGCTGATATT+GGG | + | chr2_4:61694989-61695008 | Msa0340320:CDS | 30.0% | |
ATCATGATTTGATCAAAACC+TGG | - | chr2_4:61695195-61695214 | None:intergenic | 30.0% | |
GTTTATTAGGTTAACGCTAT+TGG | + | chr2_4:61695236-61695255 | Msa0340320:intron | 30.0% | |
!! | AAAAATGTCGGTTTATTGTC+GGG | + | chr2_4:61695394-61695413 | Msa0340320:intron | 30.0% |
TTAGTTTCCTCAATGTCATT+TGG | - | chr2_4:61695509-61695528 | None:intergenic | 30.0% | |
TTGAGAATTTGCAGAAATCA+CGG | + | chr2_4:61695632-61695651 | Msa0340320:intron | 30.0% | |
! | GATTTTCCAAAATCACATTG+AGG | - | chr2_4:61695685-61695704 | None:intergenic | 30.0% |
AACATTAAACTGCAAGCTAT+CGG | - | chr2_4:61695734-61695753 | None:intergenic | 30.0% | |
! | ATAGCTTGCAGTTTAATGTT+TGG | + | chr2_4:61695734-61695753 | Msa0340320:intron | 30.0% |
!!! | TTCTGCGGATTTTAATTGAA+TGG | + | chr2_4:61695859-61695878 | Msa0340320:intron | 30.0% |
AGTACATCACATTTAATCAG+AGG | - | chr2_4:61695890-61695909 | None:intergenic | 30.0% | |
AAGAAAAGGTGAAGTTTGAT+AGG | + | chr2_4:61696272-61696291 | Msa0340320:CDS | 30.0% | |
AGGAAATATCCATTGGAAAA+GGG | + | chr2_4:61696457-61696476 | Msa0340320:CDS | 30.0% | |
AAGTCATGTGGTTTCTTATA+AGG | - | chr2_4:61696559-61696578 | None:intergenic | 30.0% | |
CACCTGATATTGCAAAAATA+AGG | + | chr2_4:61696629-61696648 | Msa0340320:CDS | 30.0% | |
!!! | CTCCTTATTTTTGCAATATC+AGG | - | chr2_4:61696634-61696653 | None:intergenic | 30.0% |
CTGATATTGCAAAAATAAGG+AGG | + | chr2_4:61696632-61696651 | Msa0340320:CDS | 30.0% | |
AAAGGAAAGTTCAATTTGGT+TGG | + | chr2_4:61696696-61696715 | Msa0340320:CDS | 30.0% | |
AAGGAAAGTTCAATTTGGTT+GGG | + | chr2_4:61696697-61696716 | Msa0340320:CDS | 30.0% | |
ATAAGAGTAATGATCAAACC+CGG | - | chr2_4:61697301-61697320 | None:intergenic | 30.0% | |
AAAGTGTGTATATGAGTAGA+CGG | + | chr2_4:61697349-61697368 | Msa0340320:CDS | 30.0% | |
AGATTATAATCAGCTTCATG+AGG | - | chr2_4:61697414-61697433 | None:intergenic | 30.0% | |
! | GGATCACCATTATTAGATTT+TGG | + | chr2_4:61697642-61697661 | Msa0340320:CDS | 30.0% |
AACCCATGATATCATCAAAA+AGG | - | chr2_4:61697698-61697717 | None:intergenic | 30.0% | |
!! | TTTTGATGATATCATGGGTT+TGG | + | chr2_4:61697698-61697717 | Msa0340320:intron | 30.0% |
! | TTTGATGATATCATGGGTTT+GGG | + | chr2_4:61697699-61697718 | Msa0340320:intron | 30.0% |
!!! | ATTCGTTTCATCTTTTTTCC+AGG | + | chr2_4:61697852-61697871 | Msa0340320:intron | 30.0% |
ATCAACATTTATGCAGTTTG+AGG | + | chr2_4:61697930-61697949 | Msa0340320:intron | 30.0% | |
!! | TAGGTTAATTTCTTTGGGAT+AGG | + | chr2_4:61698104-61698123 | Msa0340320:intron | 30.0% |
!!! | CATTTCAACTTTTTTAGGTG+TGG | + | chr2_4:61698425-61698444 | Msa0340320:intron | 30.0% |
GAAAATTCAATGTACCCTTT+AGG | + | chr2_4:61698468-61698487 | Msa0340320:intron | 30.0% | |
AATTTGAATAGGACCCTAAA+GGG | - | chr2_4:61698485-61698504 | None:intergenic | 30.0% | |
TAATTTGAATAGGACCCTAA+AGG | - | chr2_4:61698486-61698505 | None:intergenic | 30.0% | |
GGTCCTATTCAAATTAGTTA+TGG | + | chr2_4:61698490-61698509 | Msa0340320:intron | 30.0% | |
GCTTCATTTCATCAATAACA+TGG | + | chr2_4:61698634-61698653 | Msa0340320:intron | 30.0% | |
TCTTAAGGTAAGGAAAACAT+TGG | + | chr2_4:61698854-61698873 | Msa0340320:intron | 30.0% | |
ATTCTCATGTGAGTTTCAAA+GGG | - | chr2_4:61698992-61699011 | None:intergenic | 30.0% | |
AATTCTCATGTGAGTTTCAA+AGG | - | chr2_4:61698993-61699012 | None:intergenic | 30.0% | |
!!! | TTTTTTCCCACAAAAAAAGG+TGG | + | chr2_4:61699195-61699214 | Msa0340320:intron | 30.0% |
TTAGGTGCAGGAAATTTATA+GGG | - | chr2_4:61699232-61699251 | None:intergenic | 30.0% | |
ATTAGGTGCAGGAAATTTAT+AGG | - | chr2_4:61699233-61699252 | None:intergenic | 30.0% | |
! | TTTTACCGAGGACTAAAATT+AGG | - | chr2_4:61699250-61699269 | None:intergenic | 30.0% |
CTTGAATGAGTAAAAGTAAG+AGG | - | chr2_4:61699419-61699438 | None:intergenic | 30.0% | |
! | CAAAATTTGATTTCAAGTCC+TGG | - | chr2_4:61699976-61699995 | None:intergenic | 30.0% |
ATTATGATGGTTCATCCTAA+AGG | - | chr2_4:61700766-61700785 | None:intergenic | 30.0% | |
AATAAACCTTGGTCACATAT+TGG | - | chr2_4:61700892-61700911 | None:intergenic | 30.0% | |
CTCGTTACACAATAAAGAAA+CGG | + | chr2_4:61700915-61700934 | Msa0340320:intron | 30.0% | |
TTACACAATAAAGAAACGGT+AGG | + | chr2_4:61700919-61700938 | Msa0340320:intron | 30.0% | |
TAAAGAGGTTGAAATACAAG+TGG | - | chr2_4:61700988-61701007 | None:intergenic | 30.0% | |
! | AAGTTGACTTAGTATGTGTT+TGG | + | chr2_4:61701568-61701587 | Msa0340320:intron | 30.0% |
TAAGCAAACAGAAACAAAAG+AGG | - | chr2_4:61701829-61701848 | None:intergenic | 30.0% | |
! | TTTCTCAAATTCCTTTTGCA+TGG | + | chr2_4:61701955-61701974 | Msa0340320:intron | 30.0% |
GAAAATGAGGCACATAAAAA+AGG | - | chr2_4:61701993-61702012 | None:intergenic | 30.0% | |
! | GCCTCATTTTCAAAAATTTC+GGG | + | chr2_4:61702002-61702021 | Msa0340320:intron | 30.0% |
!! | TCCCGAAATTTTTGAAAATG+AGG | - | chr2_4:61702006-61702025 | None:intergenic | 30.0% |
AACGAGATTGCTAAAACTAA+GGG | - | chr2_4:61702056-61702075 | None:intergenic | 30.0% | |
TAACGAGATTGCTAAAACTA+AGG | - | chr2_4:61702057-61702076 | None:intergenic | 30.0% | |
ATGTTGAGACAGTTCATTTA+GGG | - | chr2_4:61702274-61702293 | None:intergenic | 30.0% | |
TATGTTGAGACAGTTCATTT+AGG | - | chr2_4:61702275-61702294 | None:intergenic | 30.0% | |
!! | AGGTGGATTAAAATGTCATA+TGG | + | chr2_4:61702331-61702350 | Msa0340320:intron | 30.0% |
AGAGATTGAAGTTGAAGATT+TGG | + | chr2_4:61702946-61702965 | Msa0340320:CDS | 30.0% | |
TGCAAACAACATAGTTTCTT+TGG | + | chr2_4:61703099-61703118 | Msa0340320:CDS | 30.0% | |
TCAAATGACATGTTAGTGAT+TGG | - | chr2_4:61703427-61703446 | None:intergenic | 30.0% | |
AAATCATCTAAAAGGAATGG+CGG | - | chr2_4:61703478-61703497 | None:intergenic | 30.0% | |
! | GAAATGATAAAGTACTTTGG+CGG | + | chr2_4:61703520-61703539 | Msa0340320:CDS | 30.0% |
! | AAATGATAAAGTACTTTGGC+GGG | + | chr2_4:61703521-61703540 | Msa0340320:CDS | 30.0% |
GATAATAGAGAGAGAAAGCT+AGG | - | chr2_4:61694782-61694801 | None:intergenic | 35.0% | |
!!! | TCGAATTTTTTCAACTTCGG+TGG | - | chr2_4:61694815-61694834 | None:intergenic | 35.0% |
TTTGCGATGCGATTCAATAA+GGG | - | chr2_4:61694928-61694947 | None:intergenic | 35.0% | |
GTTCACCCATGAATGAAAAT+TGG | - | chr2_4:61694966-61694985 | None:intergenic | 35.0% | |
GTTGAAATTGGAGCTGATAT+TGG | + | chr2_4:61694988-61695007 | Msa0340320:CDS | 35.0% | |
! | TGTTCTGTGAATTTTTGACC+AGG | + | chr2_4:61695174-61695193 | Msa0340320:intron | 35.0% |
!! | GATTTGAAGTACTGTGCAAT+AGG | + | chr2_4:61695300-61695319 | Msa0340320:intron | 35.0% |
GGTTTATTGTCGGGTTATTA+GGG | + | chr2_4:61695403-61695422 | Msa0340320:intron | 35.0% | |
AGCTACAATCAGCGTTATTT+CGG | - | chr2_4:61695482-61695501 | None:intergenic | 35.0% | |
GTGTATGTTTGGTATCAAAG+TGG | - | chr2_4:61695707-61695726 | None:intergenic | 35.0% | |
! | CTATCGGTTAAGTGTATGTT+TGG | - | chr2_4:61695718-61695737 | None:intergenic | 35.0% |
CAAGTTCACTTGTACATCTT+TGG | + | chr2_4:61695782-61695801 | Msa0340320:intron | 35.0% | |
AGGATCGTATCAAACTCAAA+AGG | + | chr2_4:61696020-61696039 | Msa0340320:CDS | 35.0% | |
TATCAAACTCAAAAGGCTCA+AGG | + | chr2_4:61696027-61696046 | Msa0340320:CDS | 35.0% | |
TATGGAATCATTCCTGAGAA+GGG | + | chr2_4:61696205-61696224 | Msa0340320:CDS | 35.0% | |
AAGGTGAAGTTTGATAGGAA+TGG | + | chr2_4:61696277-61696296 | Msa0340320:CDS | 35.0% | |
!! | GTTCCCATTTCGGTTATTTT+CGG | - | chr2_4:61696353-61696372 | None:intergenic | 35.0% |
GAGGAAATATCCATTGGAAA+AGG | + | chr2_4:61696456-61696475 | Msa0340320:CDS | 35.0% | |
TCATGTGGTTTCTTATAAGG+AGG | - | chr2_4:61696556-61696575 | None:intergenic | 35.0% | |
TTGAAGAAGATGTGGAAAGT+GGG | + | chr2_4:61696577-61696596 | Msa0340320:CDS | 35.0% | |
!! | TGTCTTGCAAGCATTTTGAT+TGG | - | chr2_4:61696666-61696685 | None:intergenic | 35.0% |
AGGAAAGTTCAATTTGGTTG+GGG | + | chr2_4:61696698-61696717 | Msa0340320:CDS | 35.0% | |
!! | TGTTGGTTCTGTTTCTTCTA+AGG | + | chr2_4:61696876-61696895 | Msa0340320:intron | 35.0% |
ATTTCATTGTCAGATTGTGC+TGG | - | chr2_4:61697039-61697058 | None:intergenic | 35.0% | |
ATATTCGGCAGTTTACTTCT+AGG | - | chr2_4:61697075-61697094 | None:intergenic | 35.0% | |
TCGTCTCTCTCATTCATATT+CGG | - | chr2_4:61697090-61697109 | None:intergenic | 35.0% | |
! | ATGAGACAGAATCTGTTTTG+AGG | + | chr2_4:61697154-61697173 | Msa0340320:CDS | 35.0% |
TCATGTCCTGATAAATGAAC+TGG | - | chr2_4:61697231-61697250 | None:intergenic | 35.0% | |
CATGAGTCAGTTCATTTATC+AGG | + | chr2_4:61697246-61697265 | Msa0340320:CDS | 35.0% | |
TCAGTTCATTTATCAGGACA+CGG | + | chr2_4:61697252-61697271 | Msa0340320:CDS | 35.0% | |
TAAGAGTAATGATCAAACCC+GGG | - | chr2_4:61697300-61697319 | None:intergenic | 35.0% | |
TGCAAACAGTATGATTTCCT+CGG | + | chr2_4:61697326-61697345 | Msa0340320:intron | 35.0% | |
TACAATCCAGTCACAAGATA+TGG | + | chr2_4:61697435-61697454 | Msa0340320:CDS | 35.0% | |
ATAGTTATTGCAGCATTCTC+TGG | - | chr2_4:61697531-61697550 | None:intergenic | 35.0% | |
! | AATGGTGATGAAATTATCGG+AGG | + | chr2_4:61697567-61697586 | Msa0340320:intron | 35.0% |
! | TCAAAAAGGAATGATGGTGA+TGG | - | chr2_4:61697684-61697703 | None:intergenic | 35.0% |
GATGAAATGATGCAGTACTT+TGG | + | chr2_4:61697726-61697745 | Msa0340320:intron | 35.0% | |
! | TAGTCAGACTCATGATTTGT+AGG | - | chr2_4:61697833-61697852 | None:intergenic | 35.0% |
AAATGTAACTATTGTTGGGC+TGG | + | chr2_4:61698072-61698091 | Msa0340320:intron | 35.0% | |
GATTACGTGACAATATGTCA+AGG | - | chr2_4:61698540-61698559 | None:intergenic | 35.0% | |
!! | ATTGCTCTAGTCTTAAGGTA+AGG | + | chr2_4:61698844-61698863 | Msa0340320:intron | 35.0% |
!!! | AAAGACTGTCGTTTTACCTA+TGG | + | chr2_4:61698961-61698980 | Msa0340320:intron | 35.0% |
GTTTCAAAGGGTTAATCCAT+AGG | - | chr2_4:61698980-61698999 | None:intergenic | 35.0% | |
! | TGACATACAATCTGATGATG+TGG | + | chr2_4:61699531-61699550 | Msa0340320:intron | 35.0% |
ATTCCAAGCCAATACTACTA+GGG | - | chr2_4:61699613-61699632 | None:intergenic | 35.0% | |
! | TAATCTCTCTGGTGCTAATT+TGG | + | chr2_4:61699728-61699747 | Msa0340320:intron | 35.0% |
! | AATCTCTCTGGTGCTAATTT+GGG | + | chr2_4:61699729-61699748 | Msa0340320:intron | 35.0% |
GTAAAGCAAACTTGCATAAG+CGG | + | chr2_4:61700416-61700435 | Msa0340320:intron | 35.0% | |
TAAGCGGAAACAAAACTTTG+TGG | + | chr2_4:61700432-61700451 | Msa0340320:intron | 35.0% | |
!! | ATGAAAGACTTTCTAAGGTC+AGG | - | chr2_4:61700675-61700694 | None:intergenic | 35.0% |
AATAATGTCCTTTAGGCTAG+TGG | + | chr2_4:61700713-61700732 | Msa0340320:intron | 35.0% | |
ACAAATCCAATATGTGACCA+AGG | + | chr2_4:61700883-61700902 | Msa0340320:intron | 35.0% | |
GTAACGAGGAAAATAAACCT+TGG | - | chr2_4:61700903-61700922 | None:intergenic | 35.0% | |
CGTTTCTTTATTGTGTAACG+AGG | - | chr2_4:61700917-61700936 | None:intergenic | 35.0% | |
AATAAAGAAACGGTAGGAAC+TGG | + | chr2_4:61700925-61700944 | Msa0340320:intron | 35.0% | |
!! | TTTTCCTCTTTAGAAATCCC+AGG | + | chr2_4:61701309-61701328 | Msa0340320:intron | 35.0% |
! | AGATTTGTTTACTGTCACCT+GGG | - | chr2_4:61701329-61701348 | None:intergenic | 35.0% |
! | AAGATTTGTTTACTGTCACC+TGG | - | chr2_4:61701330-61701349 | None:intergenic | 35.0% |
GAGTAGCACACTAATACTAT+TGG | - | chr2_4:61701371-61701390 | None:intergenic | 35.0% | |
GTCATCCATGATAAGATTGA+TGG | - | chr2_4:61701408-61701427 | None:intergenic | 35.0% | |
TCACTACAAACGTGATATTC+TGG | - | chr2_4:61701621-61701640 | None:intergenic | 35.0% | |
!! | TTTTGGGAAGCTAGCATTTT+TGG | - | chr2_4:61701646-61701665 | None:intergenic | 35.0% |
!! | AACGCATTAGTCTTAAGCAA+GGG | - | chr2_4:61701767-61701786 | None:intergenic | 35.0% |
TTGCTTAAGACTAATGCGTT+GGG | + | chr2_4:61701767-61701786 | Msa0340320:intron | 35.0% | |
AACAAGTAATCAGTTACACG+TGG | - | chr2_4:61701911-61701930 | None:intergenic | 35.0% | |
! | AACAGTTGATTCCATGCAAA+AGG | - | chr2_4:61701969-61701988 | None:intergenic | 35.0% |
ATCTTCATAGATGGCTGAAA+TGG | + | chr2_4:61702134-61702153 | Msa0340320:intron | 35.0% | |
ATGGCTGAAATGGAAGAAAT+TGG | + | chr2_4:61702144-61702163 | Msa0340320:intron | 35.0% | |
TGGCTGAAATGGAAGAAATT+GGG | + | chr2_4:61702145-61702164 | Msa0340320:intron | 35.0% | |
GAAAATTCAATATCCTGCCA+AGG | + | chr2_4:61702209-61702228 | Msa0340320:intron | 35.0% | |
! | GTTCTTGATGGATGGATATA+TGG | - | chr2_4:61702252-61702271 | None:intergenic | 35.0% |
! | AGTTCATTTAGGGTTCTTGA+TGG | - | chr2_4:61702264-61702283 | None:intergenic | 35.0% |
CCAACTAATTCATGAAGCTA+AGG | - | chr2_4:61702626-61702645 | None:intergenic | 35.0% | |
CCTTAGCTTCATGAATTAGT+TGG | + | chr2_4:61702623-61702642 | Msa0340320:intron | 35.0% | |
GGTTAGAGATGTAATTCAGT+TGG | + | chr2_4:61702867-61702886 | Msa0340320:intron | 35.0% | |
GAGATGTAATTCAGTTGGTT+TGG | + | chr2_4:61702872-61702891 | Msa0340320:intron | 35.0% | |
TTGAAGTTGAAGATTTGGAG+AGG | + | chr2_4:61702951-61702970 | Msa0340320:CDS | 35.0% | |
!! | TTTGTTTTTCCTTGAGCCTT+TGG | - | chr2_4:61696039-61696058 | None:intergenic | 35.0% |
TTGGAAAACATGTATGTGAG+TGG | + | chr2_4:61703118-61703137 | Msa0340320:CDS | 35.0% | |
AAAACATGTATGTGAGTGGA+AGG | + | chr2_4:61703122-61703141 | Msa0340320:CDS | 35.0% | |
AGATTATAAGCAGCTTCATG+TGG | - | chr2_4:61703187-61703206 | None:intergenic | 35.0% | |
CCTAATTGGATCAATGTTCA+CGG | - | chr2_4:61703281-61703300 | None:intergenic | 35.0% | |
ATGCCTGTAGCAAATATGAA+AGG | + | chr2_4:61703325-61703344 | Msa0340320:CDS | 35.0% | |
! | TCACCTTTCATATTTGCTAC+AGG | - | chr2_4:61703331-61703350 | None:intergenic | 35.0% |
TCATTTCATCGTCACTCATA+GGG | - | chr2_4:61703507-61703526 | None:intergenic | 35.0% | |
ATCATTTCATCGTCACTCAT+AGG | - | chr2_4:61703508-61703527 | None:intergenic | 35.0% | |
!! | TTTTTCAACTTCGGTGGTGA+TGG | - | chr2_4:61694809-61694828 | None:intergenic | 40.0% |
CTTTGCGATGCGATTCAATA+AGG | - | chr2_4:61694929-61694948 | None:intergenic | 40.0% | |
ATGGGTGAACTCGTTGAAAT+TGG | + | chr2_4:61694976-61694995 | Msa0340320:CDS | 40.0% | |
CGGTTTATTGTCGGGTTATT+AGG | + | chr2_4:61695402-61695421 | Msa0340320:intron | 40.0% | |
!! | TTAGTGTGTGTTTGGTGTTG+TGG | + | chr2_4:61695448-61695467 | Msa0340320:intron | 40.0% |
! | GCTTTTGCCAAATGACATTG+AGG | + | chr2_4:61695499-61695518 | Msa0340320:intron | 40.0% |
CAAAATCACATTGAGGTACG+TGG | - | chr2_4:61695678-61695697 | None:intergenic | 40.0% | |
! | CACGTACCTCAATGTGATTT+TGG | + | chr2_4:61695676-61695695 | Msa0340320:intron | 40.0% |
TCATCACTGACATCTTTCTC+CGG | - | chr2_4:61695962-61695981 | None:intergenic | 40.0% | |
TGTCAGTGATGAAGAGATTG+AGG | + | chr2_4:61695970-61695989 | Msa0340320:CDS | 40.0% | |
AGAGATTGAGGCAGAAGATT+TGG | + | chr2_4:61695982-61696001 | Msa0340320:CDS | 40.0% | |
TCGTAGGAAGAAAATGTCGA+GGG | + | chr2_4:61696117-61696136 | Msa0340320:CDS | 40.0% | |
TAAGTACATGCTGAAGCTCA+TGG | + | chr2_4:61696156-61696175 | Msa0340320:CDS | 40.0% | |
AAAGCTCGTGGATTTGTGTA+TGG | + | chr2_4:61696187-61696206 | Msa0340320:CDS | 40.0% | |
GTATGGAATCATTCCTGAGA+AGG | + | chr2_4:61696204-61696223 | Msa0340320:CDS | 40.0% | |
TTATCAGAGGAACCACTAAC+TGG | - | chr2_4:61696235-61696254 | None:intergenic | 40.0% | |
! | CCAAGCTCTAATGTTATCAG+AGG | - | chr2_4:61696248-61696267 | None:intergenic | 40.0% |
CCTCTGATAACATTAGAGCT+TGG | + | chr2_4:61696245-61696264 | Msa0340320:CDS | 40.0% | |
CTGATAACATTAGAGCTTGG+TGG | + | chr2_4:61696248-61696267 | Msa0340320:CDS | 40.0% | |
! | TAGAGCTTGGTGGAAAGAAA+AGG | + | chr2_4:61696258-61696277 | Msa0340320:CDS | 40.0% |
AAGACACTCTGCTTCATACT+TGG | - | chr2_4:61696317-61696336 | None:intergenic | 40.0% | |
AGGCCGAAAATAACCGAAAT+GGG | + | chr2_4:61696347-61696366 | Msa0340320:CDS | 40.0% | |
! | AATGGATATTTCCTCTGAGG+AGG | - | chr2_4:61696451-61696470 | None:intergenic | 40.0% |
TCCTCAGAGGAAATATCCAT+TGG | + | chr2_4:61696450-61696469 | Msa0340320:CDS | 40.0% | |
TCCAATGGATATTTCCTCTG+AGG | - | chr2_4:61696454-61696473 | None:intergenic | 40.0% | |
CACATCTTCTTCAAGTCATG+TGG | - | chr2_4:61696571-61696590 | None:intergenic | 40.0% | |
CACATGACTTGAAGAAGATG+TGG | + | chr2_4:61696569-61696588 | Msa0340320:CDS | 40.0% | |
CTTGAAGAAGATGTGGAAAG+TGG | + | chr2_4:61696576-61696595 | Msa0340320:CDS | 40.0% | |
!!! | CTTGCAAGCATTTTGATTGG+CGG | - | chr2_4:61696663-61696682 | None:intergenic | 40.0% |
ATGCTTGCAAGACAAGATGA+CGG | + | chr2_4:61696672-61696691 | Msa0340320:CDS | 40.0% | |
CGGCAAAGGAAAGTTCAATT+TGG | + | chr2_4:61696692-61696711 | Msa0340320:CDS | 40.0% | |
GGAAAGTTCAATTTGGTTGG+GGG | + | chr2_4:61696699-61696718 | Msa0340320:CDS | 40.0% | |
AAGAACACCAGTTGGCATAT+CGG | - | chr2_4:61696788-61696807 | None:intergenic | 40.0% | |
TCAAGAAGAAGAACACCAGT+TGG | - | chr2_4:61696796-61696815 | None:intergenic | 40.0% | |
GCTAGCAACTATGATGTTGA+TGG | + | chr2_4:61696841-61696860 | Msa0340320:CDS | 40.0% | |
AACAGAACCAACACCATCAT+CGG | - | chr2_4:61696869-61696888 | None:intergenic | 40.0% | |
! | CTGTTTCTTCTAAGGAAGAC+AGG | + | chr2_4:61696884-61696903 | Msa0340320:intron | 40.0% |
AGACAGGAGCAATCAGTTTA+TGG | + | chr2_4:61696900-61696919 | Msa0340320:CDS | 40.0% | |
! | AGATTGTGCTGGTAATGTGT+CGG | - | chr2_4:61697028-61697047 | None:intergenic | 40.0% |
CAGTTCATTTATCAGGACAC+GGG | + | chr2_4:61697253-61697272 | Msa0340320:CDS | 40.0% | |
AGTTCATTTATCAGGACACG+GGG | + | chr2_4:61697254-61697273 | Msa0340320:CDS | 40.0% | |
ACTCATATACACACTTTCCG+AGG | - | chr2_4:61697346-61697365 | None:intergenic | 40.0% | |
ATGCCTGCAGCAAATATGAA+TGG | + | chr2_4:61697549-61697568 | Msa0340320:CDS | 40.0% | |
! | TCACCATTCATATTTGCTGC+AGG | - | chr2_4:61697555-61697574 | None:intergenic | 40.0% |
!! | AAAAGGAATGATGGTGATGG+TGG | - | chr2_4:61697681-61697700 | None:intergenic | 40.0% |
CCTTGAATTTCTGTAGTTCC+TGG | - | chr2_4:61697873-61697892 | None:intergenic | 40.0% | |
CCAGGAACTACAGAAATTCA+AGG | + | chr2_4:61697870-61697889 | Msa0340320:intron | 40.0% | |
!! | CTTGTTGTTCGAATTCGTGA+AGG | + | chr2_4:61697894-61697913 | Msa0340320:CDS | 40.0% |
! | TTATGCAGTTTGAGGCAGAA+AGG | + | chr2_4:61697938-61697957 | Msa0340320:intron | 40.0% |
! | GTTGGGCTGGATGAATATTT+AGG | + | chr2_4:61698085-61698104 | Msa0340320:intron | 40.0% |
TGCTCACACCTTATCAAAGT+AGG | - | chr2_4:61698745-61698764 | None:intergenic | 40.0% | |
TTTACGTTTACCTCCTCTCA+AGG | + | chr2_4:61698902-61698921 | Msa0340320:intron | 40.0% | |
TTACGTTTACCTCCTCTCAA+GGG | + | chr2_4:61698903-61698922 | Msa0340320:intron | 40.0% | |
! | CGAGTTGAATGTCAAGTTTG+TGG | - | chr2_4:61699107-61699126 | None:intergenic | 40.0% |
!!! | GAAGTGCCACCTTTTTTTGT+GGG | - | chr2_4:61699204-61699223 | None:intergenic | 40.0% |
!!! | TGAAGTGCCACCTTTTTTTG+TGG | - | chr2_4:61699205-61699224 | None:intergenic | 40.0% |
!! | CTGCACCTAATTTTAGTCCT+CGG | + | chr2_4:61699242-61699261 | Msa0340320:intron | 40.0% |
GATTCCAAGCCAATACTACT+AGG | - | chr2_4:61699614-61699633 | None:intergenic | 40.0% | |
!! | AGTAGTATTGGCTTGGAATC+TGG | + | chr2_4:61699614-61699633 | Msa0340320:intron | 40.0% |
!! | GTAGTATTGGCTTGGAATCT+GGG | + | chr2_4:61699615-61699634 | Msa0340320:intron | 40.0% |
! | TGACGACAAAGTACCACTTA+TGG | + | chr2_4:61700140-61700159 | Msa0340320:intron | 40.0% |
! | GACGACAAAGTACCACTTAT+GGG | + | chr2_4:61700141-61700160 | Msa0340320:intron | 40.0% |
! | ACGACAAAGTACCACTTATG+GGG | + | chr2_4:61700142-61700161 | Msa0340320:intron | 40.0% |
! | TTGATTTTCGTCCCCATAAG+TGG | - | chr2_4:61700156-61700175 | None:intergenic | 40.0% |
! | TGGTTTATCCACTAGCCTAA+AGG | - | chr2_4:61700724-61700743 | None:intergenic | 40.0% |
CCACTTCAAGAAGTCTAAAG+AGG | - | chr2_4:61701003-61701022 | None:intergenic | 40.0% | |
CCTCTTTAGACTTCTTGAAG+TGG | + | chr2_4:61701000-61701019 | Msa0340320:intron | 40.0% | |
TTAGACTTCTTGAAGTGGCA+AGG | + | chr2_4:61701005-61701024 | Msa0340320:intron | 40.0% | |
! | TGATAAGATTGATGGCTAGG+AGG | - | chr2_4:61701400-61701419 | None:intergenic | 40.0% |
! | CCATGATAAGATTGATGGCT+AGG | - | chr2_4:61701403-61701422 | None:intergenic | 40.0% |
CCTAGCCATCAATCTTATCA+TGG | + | chr2_4:61701400-61701419 | Msa0340320:intron | 40.0% | |
ACATCATACACGTGATATCG+CGG | - | chr2_4:61701434-61701453 | None:intergenic | 40.0% | |
!! | TCAAGGACTTGCTAGCTAAT+TGG | + | chr2_4:61701469-61701488 | Msa0340320:intron | 40.0% |
TCTTCATCACAATCTCAGAG+AGG | + | chr2_4:61701500-61701519 | Msa0340320:intron | 40.0% | |
CTTCATCACAATCTCAGAGA+GGG | + | chr2_4:61701501-61701520 | Msa0340320:intron | 40.0% | |
CAGAGAGGGAAATTAATGTG+CGG | + | chr2_4:61701515-61701534 | Msa0340320:intron | 40.0% | |
GACTTAGTATGTGTTTGGAG+AGG | + | chr2_4:61701573-61701592 | Msa0340320:intron | 40.0% | |
TGAATGACTAAGCCTCTGAT+TGG | - | chr2_4:61701719-61701738 | None:intergenic | 40.0% | |
!! | ACGCATTAGTCTTAAGCAAG+GGG | - | chr2_4:61701766-61701785 | None:intergenic | 40.0% |
!! | CAACGCATTAGTCTTAAGCA+AGG | - | chr2_4:61701768-61701787 | None:intergenic | 40.0% |
CTTGCTTAAGACTAATGCGT+TGG | + | chr2_4:61701766-61701785 | Msa0340320:intron | 40.0% | |
ACTAATGCGTTGGGCATATT+AGG | + | chr2_4:61701776-61701795 | Msa0340320:intron | 40.0% | |
! | TTCGAATTGCAGCTGACTTA+TGG | - | chr2_4:61702106-61702125 | None:intergenic | 40.0% |
TCCACAATTTAGTCGTTCCT+TGG | - | chr2_4:61702229-61702248 | None:intergenic | 40.0% | |
! | CATTTAGGGTTCTTGATGGA+TGG | - | chr2_4:61702260-61702279 | None:intergenic | 40.0% |
CATGAATTGTTGACACCTTG+TGG | + | chr2_4:61702298-61702317 | Msa0340320:intron | 40.0% | |
!! | CACCTTGTGGATTAGAATCT+AGG | + | chr2_4:61702311-61702330 | Msa0340320:intron | 40.0% |
CACCTAGATTCTAATCCACA+AGG | - | chr2_4:61702316-61702335 | None:intergenic | 40.0% | |
!! | CTTGTGGATTAGAATCTAGG+TGG | + | chr2_4:61702314-61702333 | Msa0340320:intron | 40.0% |
TAGAAACCCTAGGATTGACA+TGG | - | chr2_4:61702369-61702388 | None:intergenic | 40.0% | |
GGGTTACAATTATAGCACAG+TGG | - | chr2_4:61702738-61702757 | None:intergenic | 40.0% | |
AGGATCGTATCAAACTCCAA+AGG | + | chr2_4:61702984-61703003 | Msa0340320:CDS | 40.0% | |
TATCAAACTCCAAAGGCTCA+AGG | + | chr2_4:61702991-61703010 | Msa0340320:CDS | 40.0% | |
TAATCTTGACCTTAGAGTCG+CGG | + | chr2_4:61703201-61703220 | Msa0340320:CDS | 40.0% | |
CCGTGAACATTGATCCAATT+AGG | + | chr2_4:61703278-61703297 | Msa0340320:CDS | 40.0% | |
ATAGTGATTGCACCATTCTG+TGG | - | chr2_4:61703307-61703326 | None:intergenic | 40.0% | |
ATGAAAGGTGACGAAATCAC+TGG | + | chr2_4:61703340-61703359 | Msa0340320:CDS | 40.0% | |
GGCCCATGAAATCATCTAAA+AGG | - | chr2_4:61703486-61703505 | None:intergenic | 40.0% | |
ACTGTGCAATAGGTGTACTG+AGG | + | chr2_4:61695310-61695329 | Msa0340320:intron | 45.0% | |
TTGAGGCAGAAGATTTGGAG+AGG | + | chr2_4:61695987-61696006 | Msa0340320:CDS | 45.0% | |
AGTCATCTGATCAAGCTCGT+AGG | + | chr2_4:61696101-61696120 | Msa0340320:CDS | 45.0% | |
CTCGTAGGAAGAAAATGTCG+AGG | + | chr2_4:61696116-61696135 | Msa0340320:CDS | 45.0% | |
! | AAAATGTCGAGGGCACAAGA+TGG | + | chr2_4:61696127-61696146 | Msa0340320:CDS | 45.0% |
! | AAATGTCGAGGGCACAAGAT+GGG | + | chr2_4:61696128-61696147 | Msa0340320:CDS | 45.0% |
!!! | CTAACTGGTTTTCCCTTCTC+AGG | - | chr2_4:61696220-61696239 | None:intergenic | 45.0% |
GAGAAGGGAAAACCAGTTAG+TGG | + | chr2_4:61696220-61696239 | Msa0340320:CDS | 45.0% | |
CTCTGCTTCATACTTGGCTA+TGG | - | chr2_4:61696311-61696330 | None:intergenic | 45.0% | |
GAGGCCGAAAATAACCGAAA+TGG | + | chr2_4:61696346-61696365 | Msa0340320:CDS | 45.0% | |
TCGCACTTGAATCTACCTCA+TGG | + | chr2_4:61696523-61696542 | Msa0340320:CDS | 45.0% | |
GTCGAGAAGAAGCTCTCATT+AGG | + | chr2_4:61696728-61696747 | Msa0340320:CDS | 45.0% | |
GGAATTACCGATATGCCAAC+TGG | + | chr2_4:61696778-61696797 | Msa0340320:CDS | 45.0% | |
!! | GATGTTGATGGTACCGATGA+TGG | + | chr2_4:61696853-61696872 | Msa0340320:CDS | 45.0% |
TCGCGAGTTATCTGATGGTT+CGG | - | chr2_4:61696929-61696948 | None:intergenic | 45.0% | |
AACCATCAGATAACTCGCGA+AGG | + | chr2_4:61696929-61696948 | Msa0340320:CDS | 45.0% | |
TTCCTTCGCGAGTTATCTGA+TGG | - | chr2_4:61696934-61696953 | None:intergenic | 45.0% | |
TCTTAGCTCGATCGGAATCT+TGG | - | chr2_4:61696963-61696982 | None:intergenic | 45.0% | |
AGGTTGCTTCTTAGCTCGAT+CGG | - | chr2_4:61696971-61696990 | None:intergenic | 45.0% | |
ATCGAGCTAAGAAGCAACCT+AGG | + | chr2_4:61696971-61696990 | Msa0340320:CDS | 45.0% | |
TAGCTGCACTCCAGATTCAT+GGG | + | chr2_4:61697118-61697137 | Msa0340320:intron | 45.0% | |
CCTGTTCATTCCCATGAATC+TGG | - | chr2_4:61697131-61697150 | None:intergenic | 45.0% | |
CCAGATTCATGGGAATGAAC+AGG | + | chr2_4:61697128-61697147 | Msa0340320:intron | 45.0% | |
TCGCTTCCAGATAGATGACT+TGG | - | chr2_4:61697204-61697223 | None:intergenic | 45.0% | |
AAGTCATCTATCTGGAAGCG+AGG | + | chr2_4:61697203-61697222 | Msa0340320:CDS | 45.0% | |
! | GAGGTGCCAGTTCATTTATC+AGG | + | chr2_4:61697222-61697241 | Msa0340320:CDS | 45.0% |
TGCAACTGAGAATAGTGCAG+CGG | - | chr2_4:61697378-61697397 | None:intergenic | 45.0% | |
CAGCTTCATGAGGCATAACA+GGG | - | chr2_4:61697404-61697423 | None:intergenic | 45.0% | |
TCAGCTTCATGAGGCATAAC+AGG | - | chr2_4:61697405-61697424 | None:intergenic | 45.0% | |
! | CCTAATTGGTTCACTGTTCG+CGG | - | chr2_4:61697505-61697524 | None:intergenic | 45.0% |
GCATTCTCTGGTTGCCTAAT+TGG | - | chr2_4:61697519-61697538 | None:intergenic | 45.0% | |
GGTGATGAAATTATCGGAGG+AGG | + | chr2_4:61697570-61697589 | Msa0340320:intron | 45.0% | |
CAAACCTATCCAGCTCGTTT+GGG | - | chr2_4:61697623-61697642 | None:intergenic | 45.0% | |
!! | GGGACATTGCTCTAGTCTTA+AGG | + | chr2_4:61698839-61698858 | Msa0340320:intron | 45.0% |
TACGTTTACCTCCTCTCAAG+GGG | + | chr2_4:61698904-61698923 | Msa0340320:intron | 45.0% | |
CGAGGACTAAAATTAGGTGC+AGG | - | chr2_4:61699244-61699263 | None:intergenic | 45.0% | |
TTGCGTTGCCCTAGTAGTAT+TGG | + | chr2_4:61699602-61699621 | Msa0340320:intron | 45.0% | |
!! | TTGCCCTAGTAGTATTGGCT+TGG | + | chr2_4:61699607-61699626 | Msa0340320:intron | 45.0% |
TAGTCCACCCAAATTAGCAC+CGG | - | chr2_4:61699668-61699687 | None:intergenic | 45.0% | |
CAAGATCAATGGCATCCTTG+TGG | - | chr2_4:61700962-61700981 | None:intergenic | 45.0% | |
CACAAGGATGCCATTGATCT+TGG | + | chr2_4:61700960-61700979 | Msa0340320:intron | 45.0% | |
! | ACAAGTGGTGCCAAGATCAA+TGG | - | chr2_4:61700973-61700992 | None:intergenic | 45.0% |
! | GTCACCTGGGATTTCTAAAG+AGG | - | chr2_4:61701316-61701335 | None:intergenic | 45.0% |
GCGGACTTCTTTGCGAAATT+CGG | + | chr2_4:61701534-61701553 | Msa0340320:intron | 45.0% | |
ACAAACGTGATATTCTGGCG+TGG | - | chr2_4:61701616-61701635 | None:intergenic | 45.0% | |
! | GCAGGATTCAACGTGGTTTT+GGG | - | chr2_4:61701662-61701681 | None:intergenic | 45.0% |
TAAGCCTCTGATTGGATCAG+CGG | - | chr2_4:61701711-61701730 | None:intergenic | 45.0% | |
!! | CATTAGTCTTAAGCAAGGGG+AGG | - | chr2_4:61701763-61701782 | None:intergenic | 45.0% |
! | GAATTGCAGCTGACTTATGG+CGG | - | chr2_4:61702103-61702122 | None:intergenic | 45.0% |
CAATTTAGTCGTTCCTTGGC+AGG | - | chr2_4:61702225-61702244 | None:intergenic | 45.0% | |
GCCAAGGAACGACTAAATTG+TGG | + | chr2_4:61702225-61702244 | Msa0340320:intron | 45.0% | |
AAACCCTAGGATTGACATGG+TGG | - | chr2_4:61702366-61702385 | None:intergenic | 45.0% | |
AAGATTTGGAGAGGCGAATG+TGG | + | chr2_4:61702960-61702979 | Msa0340320:CDS | 45.0% | |
TCTTGTGCTTGAGACTGCAT+TGG | - | chr2_4:61703061-61703080 | None:intergenic | 45.0% | |
TTGGATCAATGTTCACGGCT+GGG | - | chr2_4:61703276-61703295 | None:intergenic | 45.0% | |
ATTGGATCAATGTTCACGGC+TGG | - | chr2_4:61703277-61703296 | None:intergenic | 45.0% | |
AAAGGTGACGAAATCACTGG+AGG | + | chr2_4:61703343-61703362 | Msa0340320:CDS | 45.0% | |
CATTCCAAAACGAGCTGGAT+AGG | + | chr2_4:61703392-61703411 | Msa0340320:CDS | 45.0% | |
! | CAAACCTATCCAGCTCGTTT+TGG | - | chr2_4:61697623-61697642 | None:intergenic | 45.0% |
CAAAACGAGCTGGATAGGTT+TGG | + | chr2_4:61703397-61703416 | Msa0340320:CDS | 45.0% | |
TCTAAAAGGAATGGCGGTGA+TGG | - | chr2_4:61703472-61703491 | None:intergenic | 45.0% | |
!!! | ATAAAATTTTAATATATATC+AGG | - | chr2_4:61698227-61698246 | None:intergenic | 5.0% |
!! | GTGTGTGTTTGGTGTTGTGG+AGG | + | chr2_4:61695451-61695470 | Msa0340320:intron | 50.0% |
AGGCAGAAGATTTGGAGAGG+CGG | + | chr2_4:61695990-61696009 | Msa0340320:CDS | 50.0% | |
AAGATTTGGAGAGGCGGATG+TGG | + | chr2_4:61695996-61696015 | Msa0340320:CDS | 50.0% | |
! | CCTCGGCTTTTGCTTCTCTA+GGG | - | chr2_4:61696080-61696099 | None:intergenic | 50.0% |
GCTTGATCAGATGACTGCCT+CGG | - | chr2_4:61696097-61696116 | None:intergenic | 50.0% | |
! | ATGGAAGTGTGCAAAGCTCG+TGG | + | chr2_4:61696175-61696194 | Msa0340320:CDS | 50.0% |
TCATACTTGGCTATGGCTGC+AGG | - | chr2_4:61696304-61696323 | None:intergenic | 50.0% | |
! | AGAGTGTCTTGCTATGAGCG+AGG | + | chr2_4:61696327-61696346 | Msa0340320:CDS | 50.0% |
!! | TGCTCTGGGAGTTCCCATTT+CGG | - | chr2_4:61696363-61696382 | None:intergenic | 50.0% |
AACACTGTGATCCTCCTCAG+AGG | + | chr2_4:61696437-61696456 | Msa0340320:CDS | 50.0% | |
! | GGAGGAACACCCTTTTCCAA+TGG | - | chr2_4:61696469-61696488 | None:intergenic | 50.0% |
CACCAATCTTCATTCCCGGT+GGG | - | chr2_4:61696502-61696521 | None:intergenic | 50.0% | |
CGACCACCAATCTTCATTCC+CGG | - | chr2_4:61696506-61696525 | None:intergenic | 50.0% | |
TAAGGAGGACTCTGACCATG+AGG | - | chr2_4:61696541-61696560 | None:intergenic | 50.0% | |
! | GCAAGACAAGATGACGGCAA+AGG | + | chr2_4:61696678-61696697 | Msa0340320:CDS | 50.0% |
AGGCAGCCTAGTAGCGATAA+CGG | + | chr2_4:61696748-61696767 | Msa0340320:CDS | 50.0% | |
GACGTACCGTTATCGCTACT+AGG | - | chr2_4:61696757-61696776 | None:intergenic | 50.0% | |
! | AGTAGCGATAACGGTACGTC+TGG | + | chr2_4:61696757-61696776 | Msa0340320:CDS | 50.0% |
TTGCTAGCACTACTAGCAGC+AGG | - | chr2_4:61696829-61696848 | None:intergenic | 50.0% | |
!! | GATGGTACCGATGATGGTGT+TGG | + | chr2_4:61696859-61696878 | Msa0340320:CDS | 50.0% |
GAACGTGGTCGTTTCTTCCT+AGG | - | chr2_4:61696991-61697010 | None:intergenic | 50.0% | |
GTAGCTGCACTCCAGATTCA+TGG | + | chr2_4:61697117-61697136 | Msa0340320:intron | 50.0% | |
!!! | AGAATCTGTTTTGAGGCCGC+CGG | + | chr2_4:61697161-61697180 | Msa0340320:CDS | 50.0% |
!! | CCCTCATGTCTTATTTCCGG+CGG | - | chr2_4:61697180-61697199 | None:intergenic | 50.0% |
CCGCCGGAAATAAGACATGA+GGG | + | chr2_4:61697177-61697196 | Msa0340320:CDS | 50.0% | |
CGCCGGAAATAAGACATGAG+GGG | + | chr2_4:61697178-61697197 | Msa0340320:CDS | 50.0% | |
!! | GGCCCCTCATGTCTTATTTC+CGG | - | chr2_4:61697183-61697202 | None:intergenic | 50.0% |
CCAGTTCATGTAACAGCACC+CGG | + | chr2_4:61697279-61697298 | Msa0340320:CDS | 50.0% | |
CAGTTCATGTAACAGCACCC+GGG | + | chr2_4:61697280-61697299 | Msa0340320:CDS | 50.0% | |
AACTGAGAATAGTGCAGCGG+TGG | - | chr2_4:61697375-61697394 | None:intergenic | 50.0% | |
CTGGGACCATATCTTGTGAC+TGG | - | chr2_4:61697444-61697463 | None:intergenic | 50.0% | |
CACAAGATATGGTCCCAGTC+AGG | + | chr2_4:61697446-61697465 | Msa0340320:CDS | 50.0% | |
AGATATGGTCCCAGTCAGGA+TGG | + | chr2_4:61697450-61697469 | Msa0340320:CDS | 50.0% | |
GATATGGTCCCAGTCAGGAT+GGG | + | chr2_4:61697451-61697470 | Msa0340320:CDS | 50.0% | |
TGATGTTGCCCATCCTGACT+GGG | - | chr2_4:61697462-61697481 | None:intergenic | 50.0% | |
TTGATGTTGCCCATCCTGAC+TGG | - | chr2_4:61697463-61697482 | None:intergenic | 50.0% | |
CAACATCAACATCTGCAGCC+TGG | + | chr2_4:61697474-61697493 | Msa0340320:CDS | 50.0% | |
! | AATTGGTTCACTGTTCGCGG+CGG | - | chr2_4:61697502-61697521 | None:intergenic | 50.0% |
CCGCGAACAGTGAACCAATT+AGG | + | chr2_4:61697502-61697521 | Msa0340320:CDS | 50.0% | |
AGACACATTCCCAAACGAGC+TGG | + | chr2_4:61697611-61697630 | Msa0340320:CDS | 50.0% | |
CATTCCCAAACGAGCTGGAT+AGG | + | chr2_4:61697616-61697635 | Msa0340320:CDS | 50.0% | |
CCAAACCTATCCAGCTCGTT+TGG | - | chr2_4:61697624-61697643 | None:intergenic | 50.0% | |
CCAAACGAGCTGGATAGGTT+TGG | + | chr2_4:61697621-61697640 | Msa0340320:CDS | 50.0% | |
ACGTTTACCTCCTCTCAAGG+GGG | + | chr2_4:61698905-61698924 | Msa0340320:intron | 50.0% | |
TACTACTAGGGCAACGCAAG+TGG | - | chr2_4:61699601-61699620 | None:intergenic | 50.0% | |
! | TCTCAGGTCCGGTGCTAATT+TGG | + | chr2_4:61699657-61699676 | Msa0340320:intron | 50.0% |
! | CTCAGGTCCGGTGCTAATTT+GGG | + | chr2_4:61699658-61699677 | Msa0340320:intron | 50.0% |
! | CTCTCTGGTGCTAATTTGGG+TGG | + | chr2_4:61699732-61699751 | Msa0340320:intron | 50.0% |
CTGGTGAAGACACTTCCACA+AGG | + | chr2_4:61700944-61700963 | Msa0340320:intron | 50.0% | |
! | GGCAGGATTCAACGTGGTTT+TGG | - | chr2_4:61701663-61701682 | None:intergenic | 50.0% |
AACCACGTTGAATCCTGCCT+CGG | + | chr2_4:61701664-61701683 | Msa0340320:intron | 50.0% | |
! | TAGTCTTAAGCAAGGGGAGG+AGG | - | chr2_4:61701760-61701779 | None:intergenic | 50.0% |
ACCACCACCATGTCAATCCT+AGG | + | chr2_4:61702359-61702378 | Msa0340320:intron | 50.0% | |
CCACCACCATGTCAATCCTA+GGG | + | chr2_4:61702360-61702379 | Msa0340320:intron | 50.0% | |
TTTGGAGAGGCGAATGTGGA+AGG | + | chr2_4:61702964-61702983 | Msa0340320:CDS | 50.0% | |
TGCAAGTGAGGGTAGTGCAA+TGG | - | chr2_4:61703148-61703167 | None:intergenic | 50.0% | |
! | CAGGAGGGTTTTGCAAGTGA+GGG | - | chr2_4:61703159-61703178 | None:intergenic | 50.0% |
! | TCAGGAGGGTTTTGCAAGTG+AGG | - | chr2_4:61703160-61703179 | None:intergenic | 50.0% |
CTTCATGTGGCATGTCAGGA+GGG | - | chr2_4:61703174-61703193 | None:intergenic | 50.0% | |
GACCTTAGAGTCGCGGAATA+TGG | + | chr2_4:61703208-61703227 | Msa0340320:CDS | 50.0% | |
GACCATATTCCGCGACTCTA+AGG | - | chr2_4:61703213-61703232 | None:intergenic | 50.0% | |
GAATATGGTCCTCGTCAGGA+GGG | + | chr2_4:61703223-61703242 | Msa0340320:CDS | 50.0% | |
AATATGGTCCTCGTCAGGAG+GGG | + | chr2_4:61703224-61703243 | Msa0340320:CDS | 50.0% | |
CCATTCTGTGGCTGCCTAAT+TGG | - | chr2_4:61703295-61703314 | None:intergenic | 50.0% | |
CCAATTAGGCAGCCACAGAA+TGG | + | chr2_4:61703292-61703311 | Msa0340320:CDS | 50.0% | |
AGACGCATTCCAAAACGAGC+TGG | + | chr2_4:61703387-61703406 | Msa0340320:CDS | 50.0% | |
! | AAAAGGAATGGCGGTGATGG+TGG | - | chr2_4:61703469-61703488 | None:intergenic | 50.0% |
TTTGGAGAGGCGGATGTGGA+AGG | + | chr2_4:61696000-61696019 | Msa0340320:CDS | 55.0% | |
CCCTAGAGAAGCAAAAGCCG+AGG | + | chr2_4:61696077-61696096 | Msa0340320:CDS | 55.0% | |
! | GCCTCGGCTTTTGCTTCTCT+AGG | - | chr2_4:61696081-61696100 | None:intergenic | 55.0% |
CAGGTCTTGGAGTGTGCTCT+GGG | - | chr2_4:61696377-61696396 | None:intergenic | 55.0% | |
GCGTTGCATCTTGCAGGTCT+TGG | - | chr2_4:61696390-61696409 | None:intergenic | 55.0% | |
GACCTGCAAGATGCAACGCT+CGG | + | chr2_4:61696391-61696410 | Msa0340320:CDS | 55.0% | |
ACCTGCAAGATGCAACGCTC+GGG | + | chr2_4:61696392-61696411 | Msa0340320:CDS | 55.0% | |
!! | AAAAGGGTGTTCCTCCGCCT+TGG | + | chr2_4:61696473-61696492 | Msa0340320:CDS | 55.0% |
CCACCAATCTTCATTCCCGG+TGG | - | chr2_4:61696503-61696522 | None:intergenic | 55.0% | |
CCACCGGGAATGAAGATTGG+TGG | + | chr2_4:61696500-61696519 | Msa0340320:CDS | 55.0% | |
GGAAGAAACGACCACGTTCG+AGG | + | chr2_4:61696992-61697011 | Msa0340320:CDS | 55.0% | |
GCCGCCGGAAATAAGACATG+AGG | + | chr2_4:61697176-61697195 | Msa0340320:CDS | 55.0% | |
GAGGGGCCAAGTCATCTATC+TGG | + | chr2_4:61697195-61697214 | Msa0340320:CDS | 55.0% | |
!! | CCGGGTGCTGTTACATGAAC+TGG | - | chr2_4:61697282-61697301 | None:intergenic | 55.0% |
! | ATTGGTTCACTGTTCGCGGC+GGG | - | chr2_4:61697501-61697520 | None:intergenic | 55.0% |
CGTTTACCTCCTCTCAAGGG+GGG | + | chr2_4:61698906-61698925 | Msa0340320:intron | 55.0% | |
GTGCTCCTCCTCAAAGTCTC+AGG | + | chr2_4:61699641-61699660 | Msa0340320:intron | 55.0% | |
CCTCCTCAAAGTCTCAGGTC+CGG | + | chr2_4:61699646-61699665 | Msa0340320:intron | 55.0% | |
! | AGGTCCGGTGCTAATTTGGG+TGG | + | chr2_4:61699661-61699680 | Msa0340320:intron | 55.0% |
ACCACGTTGAATCCTGCCTC+GGG | + | chr2_4:61701665-61701684 | Msa0340320:intron | 55.0% | |
TTGAATCCTGCCTCGGGAAG+TGG | + | chr2_4:61701671-61701690 | Msa0340320:intron | 55.0% | |
AGATTTCCACTTCCCGAGGC+AGG | - | chr2_4:61701680-61701699 | None:intergenic | 55.0% | |
GGCAAGATTTCCACTTCCCG+AGG | - | chr2_4:61701684-61701703 | None:intergenic | 55.0% | |
TCTGATTGGATCAGCGGTGG+AGG | - | chr2_4:61701705-61701724 | None:intergenic | 55.0% | |
TCCACCGCTGATCCAATCAG+AGG | + | chr2_4:61701704-61701723 | Msa0340320:intron | 55.0% | |
! | TTGCAGCTGACTTATGGCGG+CGG | - | chr2_4:61702100-61702119 | None:intergenic | 55.0% |
CCCTAGGATTGACATGGTGG+TGG | - | chr2_4:61702363-61702382 | None:intergenic | 55.0% | |
GCTTCATGTGGCATGTCAGG+AGG | - | chr2_4:61703175-61703194 | None:intergenic | 55.0% | |
GCAGCTTCATGTGGCATGTC+AGG | - | chr2_4:61703178-61703197 | None:intergenic | 55.0% | |
GGAATATGGTCCTCGTCAGG+AGG | + | chr2_4:61703222-61703241 | Msa0340320:CDS | 55.0% | |
ATCAATGTTCACGGCTGGGC+TGG | - | chr2_4:61703272-61703291 | None:intergenic | 55.0% | |
GCAGGTCTTGGAGTGTGCTC+TGG | - | chr2_4:61696378-61696397 | None:intergenic | 60.0% | |
! | ACCCGAGCGTTGCATCTTGC+AGG | - | chr2_4:61696396-61696415 | None:intergenic | 60.0% |
GGCCCACCGGGAATGAAGAT+TGG | + | chr2_4:61696497-61696516 | Msa0340320:CDS | 60.0% | |
GCTGCACTTGACCTCGAACG+TGG | - | chr2_4:61697006-61697025 | None:intergenic | 60.0% | |
! | CCGGACCTGAGACTTTGAGG+AGG | - | chr2_4:61699649-61699668 | None:intergenic | 60.0% |
GCACCGGACCTGAGACTTTG+AGG | - | chr2_4:61699652-61699671 | None:intergenic | 60.0% | |
TCCCGAGGCAGGATTCAACG+TGG | - | chr2_4:61701669-61701688 | None:intergenic | 60.0% | |
GCCTCTGATTGGATCAGCGG+TGG | - | chr2_4:61701708-61701727 | None:intergenic | 60.0% | |
CGCGGAATATGGTCCTCGTC+AGG | + | chr2_4:61703219-61703238 | Msa0340320:CDS | 60.0% | |
GCAGCAGCATCAGCATCTGC+AGG | + | chr2_4:61703246-61703265 | Msa0340320:CDS | 60.0% | |
! | AGGGTGTTCCTCCGCCTTGG+TGG | + | chr2_4:61696476-61696495 | Msa0340320:CDS | 65.0% |
TCATTCCCGGTGGGCCACCA+AGG | - | chr2_4:61696493-61696512 | None:intergenic | 65.0% | |
CCTCCTCTCAAGGGGGGTAG+CGG | + | chr2_4:61698912-61698931 | Msa0340320:intron | 65.0% | |
CTCCTCTCAAGGGGGGTAGC+GGG | + | chr2_4:61698913-61698932 | Msa0340320:intron | 65.0% | |
TCCTCTCAAGGGGGGTAGCG+GGG | + | chr2_4:61698914-61698933 | Msa0340320:intron | 65.0% | |
!! | GGAGGTCAGCTGGAGGCGTT+TGG | - | chr2_4:61701742-61701761 | None:intergenic | 65.0% |
AAGGGGAGGAGGTCAGCTGG+AGG | - | chr2_4:61701749-61701768 | None:intergenic | 65.0% | |
AGCAAGGGGAGGAGGTCAGC+TGG | - | chr2_4:61701752-61701771 | None:intergenic | 65.0% | |
! | CAGCTGACTTATGGCGGCGG+TGG | - | chr2_4:61702097-61702116 | None:intergenic | 65.0% |
TTCCCGGTGGGCCACCAAGG+CGG | - | chr2_4:61696490-61696509 | None:intergenic | 70.0% | |
TCACTGTTCGCGGCGGGACC+AGG | - | chr2_4:61697495-61697514 | None:intergenic | 70.0% | |
CCGCTACCCCCCTTGAGAGG+AGG | - | chr2_4:61698915-61698934 | None:intergenic | 70.0% | |
GGCGGCGGTGGAGTTGCAGT+TGG | - | chr2_4:61702085-61702104 | None:intergenic | 70.0% | |
TGCTGCTGCCCCTCCTGACG+AGG | - | chr2_4:61703235-61703254 | None:intergenic | 70.0% | |
! | CCTCCGCCTTGGTGGCCCAC+CGG | + | chr2_4:61696484-61696503 | Msa0340320:CDS | 75.0% |
! | CTCCGCCTTGGTGGCCCACC+GGG | + | chr2_4:61696485-61696504 | Msa0340320:CDS | 75.0% |
GCCCCGCTACCCCCCTTGAG+AGG | - | chr2_4:61698918-61698937 | None:intergenic | 75.0% | |
! | CCGGTGGGCCACCAAGGCGG+AGG | - | chr2_4:61696487-61696506 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 61694711 | 61703546 | 61694711 | ID=Msa0340320;Name=Msa0340320 |
chr2_4 | mRNA | 61694711 | 61703546 | 61694711 | ID=Msa0340320-mRNA-1;Parent=Msa0340320;Name=Msa0340320-mRNA-1;_AED=0.11;_eAED=0.11;_QI=265|0.14|0.12|1|0.14|0.12|8|0|796 |
chr2_4 | exon | 61694711 | 61695010 | 61694711 | ID=Msa0340320-mRNA-1:exon:19490;Parent=Msa0340320-mRNA-1 |
chr2_4 | exon | 61695919 | 61696885 | 61695919 | ID=Msa0340320-mRNA-1:exon:19491;Parent=Msa0340320-mRNA-1 |
chr2_4 | exon | 61696898 | 61697116 | 61696898 | ID=Msa0340320-mRNA-1:exon:19492;Parent=Msa0340320-mRNA-1 |
chr2_4 | exon | 61697150 | 61697301 | 61697150 | ID=Msa0340320-mRNA-1:exon:19493;Parent=Msa0340320-mRNA-1 |
chr2_4 | exon | 61697335 | 61697570 | 61697335 | ID=Msa0340320-mRNA-1:exon:19494;Parent=Msa0340320-mRNA-1 |
chr2_4 | exon | 61697589 | 61697714 | 61697589 | ID=Msa0340320-mRNA-1:exon:19495;Parent=Msa0340320-mRNA-1 |
chr2_4 | exon | 61697874 | 61697915 | 61697874 | ID=Msa0340320-mRNA-1:exon:19496;Parent=Msa0340320-mRNA-1 |
chr2_4 | exon | 61702933 | 61703546 | 61702933 | ID=Msa0340320-mRNA-1:exon:19497;Parent=Msa0340320-mRNA-1 |
chr2_4 | five_prime_UTR | 61694711 | 61694975 | 61694711 | ID=Msa0340320-mRNA-1:five_prime_utr;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61694976 | 61695010 | 61694976 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61695919 | 61696885 | 61695919 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61696898 | 61697116 | 61696898 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61697150 | 61697301 | 61697150 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61697335 | 61697570 | 61697335 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61697589 | 61697714 | 61697589 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61697874 | 61697915 | 61697874 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
chr2_4 | CDS | 61702933 | 61703546 | 61702933 | ID=Msa0340320-mRNA-1:cds;Parent=Msa0340320-mRNA-1 |
Gene Sequence |
Protein sequence |