AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0340610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340610 MtrunA17_Chr2g0329671 95.769 969 35 2 1 968 1 964 0.0 1915
Msa0340610 MtrunA17_Chr4g0033791 59.792 960 322 21 1 950 1 906 0.0 1061
Msa0340610 MtrunA17_Chr6g0472281 34.040 896 459 20 112 961 46 855 1.21e-145 454
Msa0340610 MtrunA17_Chr1g0203081 39.765 596 309 17 177 745 124 696 4.90e-120 390
Msa0340610 MtrunA17_Chr1g0203081 45.745 94 50 1 869 961 884 977 2.47e-17 87.4
Msa0340610 MtrunA17_Chr3g0143921 39.223 566 291 14 176 701 138 690 4.25e-118 383
Msa0340610 MtrunA17_Chr5g0448621 31.044 364 205 12 173 526 122 449 1.08e-43 172
Msa0340610 MtrunA17_Chr5g0448621 67.778 90 25 1 602 691 607 692 5.77e-31 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340610 AT2G43500.3 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.9 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.6 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.1 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.10 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.11 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.7 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.8 48.830 983 433 20 1 965 1 931 0.0 808
Msa0340610 AT2G43500.5 48.193 996 433 21 1 965 1 944 0.0 800
Msa0340610 AT2G43500.4 48.193 996 433 21 1 965 1 944 0.0 800
Msa0340610 AT2G43500.2 48.092 996 434 21 1 965 1 944 0.0 798
Msa0340610 AT3G59580.2 53.413 835 335 19 158 965 84 891 0.0 749
Msa0340610 AT3G59580.3 53.413 835 335 19 158 965 84 891 0.0 749
Msa0340610 AT3G59580.1 53.413 835 335 19 158 965 84 891 0.0 749
Msa0340610 AT1G76350.2 43.503 531 257 13 174 678 103 616 8.68e-123 393
Msa0340610 AT1G76350.1 43.503 531 257 13 174 678 103 616 8.68e-123 393
Msa0340610 AT1G76350.4 43.503 531 257 13 174 678 103 616 8.68e-123 393
Msa0340610 AT1G76350.3 43.503 531 257 13 174 678 103 616 8.68e-123 393
Msa0340610 AT1G64530.1 41.165 532 281 10 176 682 103 627 4.47e-119 384
Msa0340610 AT1G64530.1 44.681 94 50 2 869 961 742 834 1.27e-14 79.0
Msa0340610 AT1G20640.1 41.636 550 268 14 176 691 104 634 1.60e-116 377
Msa0340610 AT1G20640.3 41.636 550 268 14 176 691 104 634 1.60e-116 377
Msa0340610 AT1G20640.2 41.636 550 268 14 176 691 104 634 1.60e-116 377
Msa0340610 AT4G24020.1 38.071 591 307 10 165 716 129 699 3.11e-116 380
Msa0340610 AT4G24020.1 44.086 93 52 0 869 961 864 956 5.83e-18 90.1
Msa0340610 AT2G17150.1 37.797 590 277 14 170 689 117 686 8.46e-105 348
Msa0340610 AT2G17150.6 37.797 590 277 14 170 689 117 686 8.46e-105 348
Msa0340610 AT1G64530.2 41.053 475 252 8 229 682 5 472 2.01e-104 341
Msa0340610 AT1G64530.2 44.681 94 50 2 869 961 587 679 9.84e-15 79.3
Msa0340610 AT4G38340.2 35.534 515 264 13 177 682 43 498 3.93e-84 286
Msa0340610 AT4G38340.1 34.951 515 267 12 177 682 114 569 2.07e-83 286
Msa0340610 AT2G17150.5 34.831 534 258 14 170 633 117 630 3.00e-77 266
Msa0340610 AT2G17150.3 34.831 534 258 14 170 633 117 630 3.00e-77 266
Msa0340610 AT2G17150.2 34.840 531 259 14 170 633 117 627 8.15e-77 265
Msa0340610 AT4G24020.2 38.061 423 241 7 310 716 2 419 4.84e-74 258
Msa0340610 AT4G24020.2 44.086 93 52 0 869 961 584 676 3.29e-18 90.5
Msa0340610 AT4G35270.2 36.364 374 216 6 170 533 146 507 6.60e-66 240
Msa0340610 AT4G35270.2 68.085 94 30 0 596 689 633 726 3.22e-33 139
Msa0340610 AT4G35270.2 32.090 134 80 3 836 967 829 953 7.02e-13 73.6
Msa0340610 AT4G35270.1 36.364 374 216 6 170 533 146 507 6.60e-66 240
Msa0340610 AT4G35270.1 68.085 94 30 0 596 689 633 726 3.22e-33 139
Msa0340610 AT4G35270.1 32.090 134 80 3 836 967 829 953 7.02e-13 73.6
Msa0340610 AT4G35270.3 36.364 374 216 6 170 533 146 507 6.60e-66 240
Msa0340610 AT4G35270.3 68.085 94 30 0 596 689 633 726 3.22e-33 139
Msa0340610 AT4G35270.3 32.090 134 80 3 836 967 829 953 7.02e-13 73.6
Msa0340610 AT4G35270.4 36.364 374 216 6 170 533 146 507 6.60e-66 240
Msa0340610 AT4G35270.4 68.085 94 30 0 596 689 633 726 3.22e-33 139
Msa0340610 AT4G35270.4 32.090 134 80 3 836 967 829 953 7.02e-13 73.6
Msa0340610 AT2G17150.4 36.597 429 187 11 327 689 22 431 2.97e-61 221

Find 282 sgRNAs with CRISPR-Local

Find 559 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAAGGTTGTTCAAATTT+TGG 0.056360 2_4:-61954625 Msa0340610:three_prime_UTR
TTCTGCAGCTTGTAAATTTA+AGG 0.093120 2_4:-61958396 Msa0340610:intron
CGGTGGAAATTACAATAATT+TGG 0.148108 2_4:-61960592 Msa0340610:CDS
TACTTGACCATCATGCTTTA+TGG 0.152319 2_4:+61960287 None:intergenic
CCTCCTCCCTTAGAATAAAA+AGG 0.191366 2_4:+61960885 None:intergenic
TCATGCACGCAAGTTCAATT+TGG 0.198325 2_4:-61957902 Msa0340610:CDS
ACTTATGCTGGTTTGTGTTC+TGG 0.232633 2_4:-61960741 Msa0340610:CDS
TCCAGAGTGCAGATCAAATA+TGG 0.239291 2_4:+61960023 None:intergenic
ATGCAAATAACTTAAGTTCT+AGG 0.244573 2_4:-61960491 Msa0340610:CDS
AATGAAGTGGTTTCTATAAA+AGG 0.247968 2_4:+61962167 None:intergenic
AGCATTTGATCTAGTAAATA+AGG 0.257952 2_4:+61960243 None:intergenic
CGATTTGAGGTTGCTATAAA+TGG 0.258271 2_4:+61962230 None:intergenic
GACTGTGCTGGACTCTGTTC+AGG 0.259079 2_4:-61955639 Msa0340610:CDS
AAATATCAGTGCTGATCTTT+TGG 0.260794 2_4:-61961709 Msa0340610:five_prime_UTR
ACATGTCAATGCCTTTGATA+TGG 0.261374 2_4:-61960445 Msa0340610:CDS
ATTTGCCTTTGGATGGCTTC+TGG 0.267597 2_4:+61955084 None:intergenic
AAGAGTTTGAGGACAGTTTC+AGG 0.268953 2_4:-61957733 Msa0340610:CDS
CTCGGATTTGCAAGTGTGTT+TGG 0.281838 2_4:-61954865 Msa0340610:CDS
GGGAATATTGGCACAAGTTT+GGG 0.289363 2_4:-61960313 Msa0340610:CDS
TATTCTAAGGGAGGAGGAAT+TGG 0.295976 2_4:-61960879 Msa0340610:CDS
GGGGAATATTGGCACAAGTT+TGG 0.300013 2_4:-61960314 Msa0340610:CDS
AGATTTGGTCCCCAACATTC+AGG 0.309180 2_4:-61961686 Msa0340610:intron
ACACCATATACAGAACTATA+AGG 0.318074 2_4:+61954532 None:intergenic
GAATCCGAACATACTGAAAC+TGG 0.321066 2_4:-61961765 Msa0340610:five_prime_UTR
AGCTCTCCCCATGTGGAGTT+TGG 0.325131 2_4:+61954571 None:intergenic
CTCCCTTATAGTTCTGTATA+TGG 0.325584 2_4:-61954535 Msa0340610:three_prime_UTR
CCCCATGTGGAGTTTGGACT+TGG 0.326143 2_4:+61954577 None:intergenic
TTTAGACCCGCTATCAACTA+TGG 0.328541 2_4:+61955058 None:intergenic
GAGACAGCATCTTGTGAAAT+AGG 0.331476 2_4:+61955488 None:intergenic
TCCTTCAAAACCTGAATGTT+GGG 0.333501 2_4:+61961676 None:intergenic
AGATGGTGGAATCAACAATT+TGG 0.333525 2_4:-61960811 Msa0340610:CDS
AGAAAATTTGTAAGAGTTTG+AGG 0.336722 2_4:-61957744 Msa0340610:CDS
TTACTAGATCAAATGCTTGC+AGG 0.337094 2_4:-61960237 Msa0340610:CDS
GGTTGTATACCGGGTCTTCC+TGG 0.337789 2_4:-61960165 Msa0340610:CDS
ACTTGACCATCATGCTTTAT+GGG 0.340506 2_4:+61960288 None:intergenic
ATTCACTTTATTAATCTTGC+GGG 0.349561 2_4:+61955682 None:intergenic
GAAAGCTCAGTGGCGGGGTT+TGG 0.354086 2_4:-61957691 Msa0340610:CDS
GGCCCTTCGAACTGAGTTCC+AGG 0.358856 2_4:+61960843 None:intergenic
AAACGAGCCTTCTTGTAATC+AGG 0.361894 2_4:-61957545 Msa0340610:intron
AATCATTTGTCGGTCACTTC+AGG 0.363222 2_4:-61959932 Msa0340610:intron
AATTTAATTATAACATCTCT+TGG 0.371790 2_4:+61954397 None:intergenic
AGTGAAGATTCAAAATCATT+TGG 0.377378 2_4:-61955386 Msa0340610:CDS
ACTGCCATGTTCTGCTGTCT+TGG 0.377831 2_4:-61960001 Msa0340610:CDS
TGGCAGTAGCAGTTGCTACT+TGG 0.383051 2_4:-61954769 Msa0340610:CDS
AACTATGGTTGATTTGCCTT+TGG 0.383222 2_4:+61955073 None:intergenic
CATGCACGCAAGTTCAATTT+GGG 0.388727 2_4:-61957901 Msa0340610:CDS
AGCTTGACAGATTCGTCTAA+TGG 0.389594 2_4:-61955158 Msa0340610:CDS
ATAATCGGTTGACCAAAGTA+TGG 0.394135 2_4:-61960913 Msa0340610:exon
GACTACCAGAAAAGTATTGC+TGG 0.397350 2_4:+61957011 None:intergenic
GACTCTGTTCAGGGAGTTGA+AGG 0.398605 2_4:-61955629 Msa0340610:CDS
CGTGATATTCCTTGTACGTT+TGG 0.399796 2_4:-61954798 Msa0340610:CDS
CCTTGTACGTTTGGCAGCTC+TGG 0.401444 2_4:-61954789 Msa0340610:CDS
GCTCGTTTCCATTGTTTCTC+AGG 0.406738 2_4:+61957560 None:intergenic
TGACTCCCTTTCATATTGAT+AGG 0.408007 2_4:+61957808 None:intergenic
GTAGTGAGGACTGTGGTAAA+TGG 0.408755 2_4:-61954464 Msa0340610:three_prime_UTR
AAACGTAAACATAGTACTAT+TGG 0.410618 2_4:-61955272 Msa0340610:CDS
GCAATTGATCGAACAAGTAT+TGG 0.411484 2_4:+61955409 None:intergenic
CAGCAAATGGATACCCTACT+TGG 0.412460 2_4:-61960534 Msa0340610:CDS
ATTCTAAGGGAGGAGGAATT+GGG 0.415870 2_4:-61960878 Msa0340610:CDS
GTTTCAGGTGCTGAAATATC+AGG 0.418658 2_4:-61957718 Msa0340610:CDS
TAATAATGATGATTACATAT+TGG 0.420540 2_4:-61957842 Msa0340610:CDS
CGTAGAAGGACTCTAATAAT+CGG 0.421310 2_4:-61960928 Msa0340610:five_prime_UTR
TTCTGTTCAGAAGCTATCAT+TGG 0.422295 2_4:-61957593 Msa0340610:CDS
TTCCTTCAAAACCTGAATGT+TGG 0.426568 2_4:+61961675 None:intergenic
GCCTAGTGAAGGTGAGAATT+CGG 0.430175 2_4:-61955462 Msa0340610:CDS
GAGCCATTACAAGCTTGTTC+AGG 0.431921 2_4:+61955350 None:intergenic
TCCTTCCTCGGGAGCATTTG+TGG 0.433735 2_4:-61955591 Msa0340610:CDS
ACACCCAGTTTCAGTATGTT+CGG 0.434296 2_4:+61961761 None:intergenic
CAAAGATTTCGTCATCTTCG+AGG 0.434417 2_4:-61962083 Msa0340610:five_prime_UTR
TAAGGACTACTGTGTCTTCT+CGG 0.436492 2_4:-61958378 Msa0340610:CDS
TAGTACTTCTCTCGGGGAAA+AGG 0.440138 2_4:+61955525 None:intergenic
GAAAATTGTGAGTCAGCAAA+TGG 0.441619 2_4:-61960547 Msa0340610:CDS
GGAAGTCCACTCGGGAACTT+TGG 0.441868 2_4:+61960128 None:intergenic
GGCAGTAGCAGTTGCTACTT+GGG 0.444376 2_4:-61954768 Msa0340610:CDS
CAGGGTATCGTGAAGTTTCA+AGG 0.446548 2_4:-61960218 Msa0340610:CDS
TCAGCCCTCAAGTACTCCTT+TGG 0.449207 2_4:+61960087 None:intergenic
TGTCCACTGTTCTGTTCGAC+TGG 0.449261 2_4:+61960636 None:intergenic
GTCTTGTGTAGTACTTCTCT+CGG 0.452172 2_4:+61955517 None:intergenic
ATGAACTTTGATACTTATGC+TGG 0.452182 2_4:-61960753 Msa0340610:CDS
ATTTAATTATAACATCTCTT+GGG 0.453302 2_4:+61954398 None:intergenic
ATGGTATATTCACAATCGTA+TGG 0.454299 2_4:-61954696 Msa0340610:three_prime_UTR
ATCTAGATGATGAAGAAGAA+TGG 0.454977 2_4:-61954905 Msa0340610:CDS
TTCTTGCAAAATGTGATGAA+TGG 0.457621 2_4:-61955325 Msa0340610:CDS
ACCAGCTGATTCTTTAAAGA+AGG 0.458001 2_4:+61960338 None:intergenic
GTTGAAGTTTGATCCTTCCT+CGG 0.458246 2_4:-61955603 Msa0340610:CDS
GAGGAAGGGAAAGGTGTAGC+TGG 0.459073 2_4:-61958003 Msa0340610:CDS
TGAGAATTCGGAAAATAAGT+TGG 0.459232 2_4:-61955450 Msa0340610:CDS
AAGTGACAAAGCAGGTGGCC+TGG 0.460974 2_4:+61960386 None:intergenic
AGCTGCTTTAACCGAGATAG+TGG 0.461654 2_4:-61958250 Msa0340610:CDS
ATTGGGTATTGGCAGTCTCC+TGG 0.461695 2_4:-61960861 Msa0340610:CDS
GAAGAAAATTCAGACTGTGC+TGG 0.461810 2_4:-61955651 Msa0340610:CDS
ACAGATTCGTCTAATGGCTC+TGG 0.465849 2_4:-61955152 Msa0340610:CDS
TGGGTGCTGCAGTTGCAATC+AGG 0.467237 2_4:-61957882 Msa0340610:CDS
CCCATATTTGATCTGCACTC+TGG 0.469300 2_4:-61960024 Msa0340610:CDS
ATGGTTGATTTGCCTTTGGA+TGG 0.470327 2_4:+61955077 None:intergenic
GATATCATTAATAAATGAAA+AGG 0.471474 2_4:-61957620 Msa0340610:CDS
TCTAGATGATGAAGAAGAAT+GGG 0.473128 2_4:-61954904 Msa0340610:CDS
CATGTCAATGCCTTTGATAT+GGG 0.473418 2_4:-61960444 Msa0340610:CDS
TCCTCGGGAGCATTTGTGGC+AGG 0.474732 2_4:-61955587 Msa0340610:CDS
TCCTTCTTTAAAGAATCAGC+TGG 0.478276 2_4:-61960339 Msa0340610:CDS
GGCCACAAGCTTTAATCTCC+AGG 0.478428 2_4:-61960404 Msa0340610:CDS
CACCATATACAGAACTATAA+GGG 0.479467 2_4:+61954533 None:intergenic
AGGGAGGAGGAATTGGGTAT+TGG 0.484203 2_4:-61960872 Msa0340610:CDS
ACTGTGCTGGACTCTGTTCA+GGG 0.485567 2_4:-61955638 Msa0340610:CDS
TTCTTCCTATCAATATGAAA+GGG 0.486010 2_4:-61957813 Msa0340610:CDS
CTCCAAGTCCAAACTCCACA+TGG 0.487533 2_4:-61954579 Msa0340610:three_prime_UTR
GGCAAGAGATGGAAGCTCAT+TGG 0.490060 2_4:+61960692 None:intergenic
AGGAAAACCAGGTTGTATAC+CGG 0.500824 2_4:-61960175 Msa0340610:CDS
TTCAAGTTTGATCCATCCAC+AGG 0.501001 2_4:-61954996 Msa0340610:CDS
TAAGTTGGAGGGAAAATTGA+AGG 0.501522 2_4:-61955435 Msa0340610:CDS
GAGATGGACACTGGTGCGGA+TGG 0.503007 2_4:-61955221 Msa0340610:CDS
TTCACGTCAGAATAGAAGAA+AGG 0.503510 2_4:+61957958 None:intergenic
TACTAGATCAAATGCTTGCA+GGG 0.504953 2_4:-61960236 Msa0340610:CDS
TCGACTGGATTGAATCCATC+AGG 0.506035 2_4:+61960651 None:intergenic
TCTTGTGTAGTACTTCTCTC+GGG 0.508170 2_4:+61955518 None:intergenic
CCAGAGCTGCCAAACGTACA+AGG 0.509239 2_4:+61954789 None:intergenic
TTCCTTTGCTGTTGATGAGA+TGG 0.509716 2_4:-61955237 Msa0340610:CDS
TTGAAGTTTGATCCTTCCTC+GGG 0.512619 2_4:-61955602 Msa0340610:CDS
TTTCTTCCTATCAATATGAA+AGG 0.514433 2_4:-61957814 Msa0340610:CDS
GTATTATATCAATCGCCTGA+TGG 0.515129 2_4:-61960666 Msa0340610:CDS
CTTTAAAGAATCAGCTGGTG+GGG 0.515685 2_4:-61960334 Msa0340610:CDS
GATTCACTTTATTAATCTTG+CGG 0.516956 2_4:+61955681 None:intergenic
AAAGTTGTCACTACTTGACT+TGG 0.517094 2_4:+61954309 None:intergenic
CTCTTATTAGACAACCTCTC+AGG 0.517449 2_4:-61957775 Msa0340610:CDS
TTCAAGAAGGCTGGCGAACA+AGG 0.518029 2_4:-61960976 Msa0340610:five_prime_UTR
GGAACAGAAAGCTCAGTGGC+GGG 0.520068 2_4:-61957697 Msa0340610:CDS
CTGAGAGTTCCTCGTAGATG+TGG 0.521452 2_4:+61957642 None:intergenic
TACTAGAATACAAATTAAAG+AGG 0.522203 2_4:-61958136 Msa0340610:CDS
CTTATAGGCTTCAAGAAGGC+TGG 0.522536 2_4:-61960985 Msa0340610:intron
GGAATCCATGTTAGTGCCAA+TGG 0.523790 2_4:+61958192 None:intergenic
TTCTATATGACAGGAGGAGT+CGG 0.524879 2_4:-61960612 Msa0340610:CDS
CCAGAGTGCAGATCAAATAT+GGG 0.525094 2_4:+61960024 None:intergenic
CAACTCTGAAAAGGATATGC+AGG 0.525861 2_4:-61955730 Msa0340610:CDS
CAATCCAAAGGAGTACTTGA+GGG 0.526384 2_4:-61960091 Msa0340610:CDS
CTGCAGTTGCAATCAGGCTA+AGG 0.527038 2_4:-61957876 Msa0340610:CDS
AGATTCAAAATCATTTGGAA+TGG 0.527322 2_4:-61955381 Msa0340610:CDS
ACACCTTTCCCTTCCTCAAG+AGG 0.528287 2_4:+61958009 None:intergenic
CATCATCTAGATATTTGAGC+TGG 0.528433 2_4:+61954916 None:intergenic
GATGGACACTGGTGCGGATG+GGG 0.529928 2_4:-61955219 Msa0340610:CDS
GAAGGGCCAACATCATTAGA+TGG 0.530575 2_4:-61960828 Msa0340610:CDS
TGGGTAATTATGTAATCGCC+AGG 0.533372 2_4:-61960425 Msa0340610:CDS
CCCGAGTGGACTTCCAATGT+TGG 0.533775 2_4:-61960120 Msa0340610:CDS
CAGCAAAGGAACTTGTCCTC+TGG 0.533995 2_4:+61955249 None:intergenic
ACCAACATTGGAAGTCCACT+CGG 0.534017 2_4:+61960119 None:intergenic
TGAGAGTTCCTCGTAGATGT+GGG 0.534931 2_4:+61957643 None:intergenic
ACGAATGGTGTCTTCTCCAT+AGG 0.535697 2_4:+61955019 None:intergenic
CTGTTCAGGGAGTTGAAGGC+GGG 0.538108 2_4:-61955625 Msa0340610:CDS
GATTGCCATTGGCACTAACA+TGG 0.538826 2_4:-61958197 Msa0340610:CDS
TTCTTTAAAGAATCAGCTGG+TGG 0.540778 2_4:-61960336 Msa0340610:CDS
ATTCCACCATCTAATGATGT+TGG 0.541739 2_4:+61960822 None:intergenic
ATCGTGGTGAAAGCTACCTA+TGG 0.541964 2_4:-61955035 Msa0340610:CDS
GCAAGAAATCACGAGGTTCG+TGG 0.542126 2_4:-61960060 Msa0340610:CDS
TGGTATATTCACAATCGTAT+GGG 0.543088 2_4:-61954695 Msa0340610:three_prime_UTR
GAGAGTTGGAAATCATTTGT+CGG 0.543700 2_4:-61959942 Msa0340610:CDS
TGGATTGTAATAACCAACAT+TGG 0.543898 2_4:+61960107 None:intergenic
TCTTTAAAGAATCAGCTGGT+GGG 0.543925 2_4:-61960335 Msa0340610:CDS
TCGGGAGCATTTGTGGCAGG+AGG 0.544105 2_4:-61955584 Msa0340610:CDS
TTTAAAGAATCAGCTGGTGG+GGG 0.544532 2_4:-61960333 Msa0340610:CDS
ACGTAAGATTCAGCGATTTG+AGG 0.544607 2_4:+61962217 None:intergenic
TTTGCCCGACAACTCTGAAA+AGG 0.545389 2_4:-61955739 Msa0340610:CDS
TCTGTCAAGCTTGAAGAAGT+AGG 0.547457 2_4:+61955170 None:intergenic
GCCACAAATGCTCCCGAGGA+AGG 0.547549 2_4:+61955590 None:intergenic
GGTCATAATCTGATCGGTCA+TGG 0.547768 2_4:+61960713 None:intergenic
ATAATCTGATCGGTCATGGA+TGG 0.549901 2_4:+61960717 None:intergenic
ATGAGCTCGGAGAAGCTGTT+AGG 0.550218 2_4:+61960774 None:intergenic
AGTGGACAATTCTATATGAC+AGG 0.551247 2_4:-61960621 Msa0340610:CDS
CCTTCAAAACCTGAATGTTG+GGG 0.552362 2_4:+61961677 None:intergenic
AAGCAGTTAAAGAAATGAAG+TGG 0.553545 2_4:+61962154 None:intergenic
AGATGGACACTGGTGCGGAT+GGG 0.554249 2_4:-61955220 Msa0340610:CDS
CGTCAGAATAGAAGAAAGGA+TGG 0.554794 2_4:+61957962 None:intergenic
CGAGCCTCGACACAATGATA+AGG 0.559241 2_4:-61954640 Msa0340610:three_prime_UTR
AGTTTATAATAACCTGTGGA+TGG 0.561804 2_4:+61954984 None:intergenic
AGTATCAAAGTTCATGAGCT+CGG 0.561966 2_4:+61960761 None:intergenic
TTGGAGATAAACACACGGCC+AGG 0.562523 2_4:+61960147 None:intergenic
TAATCTGATCGGTCATGGAT+GGG 0.565454 2_4:+61960718 None:intergenic
TACATAATTACCCATATCAA+AGG 0.566887 2_4:+61960434 None:intergenic
GCTGTTGATGAGATGGACAC+TGG 0.568071 2_4:-61955230 Msa0340610:CDS
CTCATTGGTCATAATCTGAT+CGG 0.568490 2_4:+61960707 None:intergenic
AGCTCTGAAGTGAAGTGAAA+GGG 0.568588 2_4:+61962128 None:intergenic
TATAATACCGAGGCAAGAGA+TGG 0.568624 2_4:+61960681 None:intergenic
AGTTACATCTCTTGTGCCGT+CGG 0.569686 2_4:+61958158 None:intergenic
GCTTCTAACCTGAGAAACAA+TGG 0.569981 2_4:-61957568 Msa0340610:CDS
CTCTCATCAAGTGACAAAGC+AGG 0.571806 2_4:+61960378 None:intergenic
TCTGTTCAGGGAGTTGAAGG+CGG 0.572045 2_4:-61955626 Msa0340610:CDS
AGAGTTCCTCGTAGATGTGG+GGG 0.573673 2_4:+61957645 None:intergenic
TATTTCACAAGATGCTGTCT+CGG 0.573674 2_4:-61955486 Msa0340610:CDS
AATTCGGAAAATAAGTTGGA+GGG 0.574912 2_4:-61955446 Msa0340610:CDS
TCTCCTGGAACTCAGTTCGA+AGG 0.575989 2_4:-61960846 Msa0340610:CDS
CAGCTCTGAAGTGAAGTGAA+AGG 0.576444 2_4:+61962127 None:intergenic
TGTCCTGAACAAGCTTGTAA+TGG 0.576447 2_4:-61955353 Msa0340610:CDS
GGAGATTAAAGCTTGTGGCC+TGG 0.576625 2_4:+61960407 None:intergenic
ATTGAACATCCTCTTGAGGA+AGG 0.577756 2_4:-61958018 Msa0340610:CDS
TGTAGTAAGTAGTAGTAGTG+AGG 0.578131 2_4:-61954478 Msa0340610:three_prime_UTR
TGTTGTCTAAGAAACCAAGT+AGG 0.578469 2_4:+61960520 None:intergenic
TCCGAATTCTCACCTTCACT+AGG 0.579093 2_4:+61955461 None:intergenic
AACACACGGCCAGGAAGACC+CGG 0.580655 2_4:+61960156 None:intergenic
CAAACTTATAGGCTTCAAGA+AGG 0.580945 2_4:-61960989 Msa0340610:intron
CTATATAACTGATAAAGTGA+TGG 0.581018 2_4:-61958061 Msa0340610:CDS
AATCAACCATAGTTGATAGC+GGG 0.581642 2_4:-61955064 Msa0340610:CDS
GTCTTCTCGGCTGCTTCCTG+AGG 0.583210 2_4:-61958365 Msa0340610:intron
TCGTAACACATCCACTATCT+CGG 0.583983 2_4:+61958239 None:intergenic
ACATGGGGACACATAATGCC+AGG 0.584136 2_4:-61954830 Msa0340610:CDS
GGCTCTGGTTCAATGATACA+TGG 0.586882 2_4:-61955137 Msa0340610:CDS
GGAAAACCAGGTTGTATACC+GGG 0.587047 2_4:-61960174 Msa0340610:CDS
GGTATATTCACAATCGTATG+GGG 0.587138 2_4:-61954694 Msa0340610:three_prime_UTR
GAAAAGAAAAGTGTACAAAG+TGG 0.587918 2_4:-61954356 Msa0340610:three_prime_UTR
TCCTGCCACAAATGCTCCCG+AGG 0.588911 2_4:+61955586 None:intergenic
CTCCTGGAACTCAGTTCGAA+GGG 0.589676 2_4:-61960845 Msa0340610:CDS
TGAGCTTCCATCTCTTGCCT+CGG 0.590111 2_4:-61960688 Msa0340610:CDS
ACAATCCAAAGGAGTACTTG+AGG 0.591635 2_4:-61960092 Msa0340610:CDS
ATAACTGATAAAGTGATGGA+AGG 0.592990 2_4:-61958057 Msa0340610:CDS
GAGAGTTCCTCGTAGATGTG+GGG 0.593304 2_4:+61957644 None:intergenic
AGGAAGGGAAAGGTGTAGCT+GGG 0.598013 2_4:-61958002 Msa0340610:CDS
AAGGCATTGACATGTTGCGA+AGG 0.600641 2_4:+61960453 None:intergenic
GTCCATCTCATCAACAGCAA+AGG 0.601465 2_4:+61955235 None:intergenic
TAGTAAATAAGGTTGCTCGC+TGG 0.602156 2_4:+61960254 None:intergenic
CGGGAGCATTTGTGGCAGGA+GGG 0.602994 2_4:-61955583 Msa0340610:CDS
TTGGAAATATTGAATGACAT+GGG 0.603959 2_4:-61954846 Msa0340610:CDS
ACTTTATTAATCTTGCGGGA+TGG 0.608700 2_4:+61955686 None:intergenic
ATATAGTTTATAATAACCTG+TGG 0.608746 2_4:+61954980 None:intergenic
CATCCTCTTGAGGAAGGGAA+AGG 0.611120 2_4:-61958012 Msa0340610:CDS
TCCAAGTCCAAACTCCACAT+GGG 0.611545 2_4:-61954578 Msa0340610:three_prime_UTR
TGTTGGTTATTACAATCCAA+AGG 0.612271 2_4:-61960103 Msa0340610:CDS
TGATTCTTTAAAGAAGGACA+AGG 0.613676 2_4:+61960344 None:intergenic
GAACAGAAAGCTCAGTGGCG+GGG 0.614217 2_4:-61957696 Msa0340610:CDS
GCTGTCTCGGTGCCTAGTGA+AGG 0.616520 2_4:-61955473 Msa0340610:CDS
GGAAGACCCGGTATACAACC+TGG 0.617047 2_4:+61960168 None:intergenic
TTGCGTGCATGATGAACAAG+CGG 0.617485 2_4:+61957913 None:intergenic
GGCATCACGGAATTTCAAGA+TGG 0.617910 2_4:-61955709 Msa0340610:CDS
TCATGCACATAGATTGCCAT+TGG 0.618347 2_4:-61958208 Msa0340610:CDS
TTGAACATCCTCTTGAGGAA+GGG 0.619409 2_4:-61958017 Msa0340610:CDS
GAATTCGGAAAATAAGTTGG+AGG 0.619581 2_4:-61955447 Msa0340610:CDS
GGCCTGGAGATTAAAGCTTG+TGG 0.620562 2_4:+61960402 None:intergenic
TCATTAATAAATGAAAAGGA+TGG 0.621279 2_4:-61957616 Msa0340610:CDS
GGGTAAACCTGATTACAAGA+AGG 0.626966 2_4:+61957538 None:intergenic
CTTGGAACTTGTCACTACAA+AGG 0.628059 2_4:-61959983 Msa0340610:CDS
AGGAACAGAAAGCTCAGTGG+CGG 0.628751 2_4:-61957698 Msa0340610:CDS
AGTTCCAAGACAGCAGAACA+TGG 0.628911 2_4:+61959997 None:intergenic
TATATGACAGGAGGAGTCGG+TGG 0.630922 2_4:-61960609 Msa0340610:CDS
AGGCATTGACATGTTGCGAA+GGG 0.631138 2_4:+61960454 None:intergenic
CCAACATTGGAAGTCCACTC+GGG 0.631707 2_4:+61960120 None:intergenic
GTTGTCTAAGAAACCAAGTA+GGG 0.631726 2_4:+61960521 None:intergenic
AAGAACCAGAAGCCATCCAA+AGG 0.633612 2_4:-61955089 Msa0340610:CDS
AGTAGTAGTAGTGAGGACTG+TGG 0.634102 2_4:-61954471 Msa0340610:three_prime_UTR
AGTTCCTCGTAGATGTGGGG+GGG 0.635344 2_4:+61957647 None:intergenic
TGGGTACCCATAAAGCATGA+TGG 0.635439 2_4:-61960294 Msa0340610:CDS
ACTAGAATACAAATTAAAGA+GGG 0.637180 2_4:-61958135 Msa0340610:CDS
TCAAGCTTGAAGAAGTAGGA+TGG 0.637832 2_4:+61955174 None:intergenic
TTTGGAAATATTGAATGACA+TGG 0.638016 2_4:-61954847 Msa0340610:CDS
GAGTTCCTCGTAGATGTGGG+GGG 0.640865 2_4:+61957646 None:intergenic
AAAAGGATATGCAGGCATCA+CGG 0.641252 2_4:-61955722 Msa0340610:CDS
ATGCATTGAACATCCTCTTG+AGG 0.647773 2_4:-61958022 Msa0340610:CDS
GCAAGATTTAAACTACAAGA+CGG 0.651434 2_4:-61954945 Msa0340610:CDS
GAATGGATTCTAAACAATGG+CGG 0.656690 2_4:-61955308 Msa0340610:CDS
AATATCACGAACAAGAAACC+TGG 0.657262 2_4:+61954812 None:intergenic
GGGCCAACATCATTAGATGG+TGG 0.661277 2_4:-61960825 Msa0340610:CDS
AATCCGAACATACTGAAACT+GGG 0.662876 2_4:-61961764 Msa0340610:five_prime_UTR
TGAACAAAGCTCTCCCCATG+TGG 0.663291 2_4:+61954564 None:intergenic
AGTAGCAGTTGCTACTTGGG+AGG 0.665725 2_4:-61954765 Msa0340610:CDS
CCAAGTCCAAACTCCACATG+GGG 0.666270 2_4:-61954577 Msa0340610:three_prime_UTR
TGGATCAAACTTGAAACGAA+TGG 0.667147 2_4:+61955004 None:intergenic
GGACAATTCTATATGACAGG+AGG 0.669224 2_4:-61960618 Msa0340610:CDS
AAATCAACCATAGTTGATAG+CGG 0.669638 2_4:-61955065 Msa0340610:CDS
CTTGTGTAGTACTTCTCTCG+GGG 0.672509 2_4:+61955519 None:intergenic
TCATCAAGTGACAAAGCAGG+TGG 0.674221 2_4:+61960381 None:intergenic
TGGAAATATTGAATGACATG+GGG 0.677817 2_4:-61954845 Msa0340610:CDS
TTATCTCCAAAGTTCCCGAG+TGG 0.681434 2_4:-61960134 Msa0340610:CDS
ACAACCTTATCATTGTGTCG+AGG 0.686246 2_4:+61954636 None:intergenic
GGTTGCTATAAATGGTATGA+CGG 0.687048 2_4:+61962238 None:intergenic
CATATACAGAACTATAAGGG+AGG 0.687051 2_4:+61954536 None:intergenic
TGATAGCGGGTCTAAAATCG+TGG 0.687347 2_4:-61955051 Msa0340610:CDS
AATCCAGTCGAACAGAACAG+TGG 0.691433 2_4:-61960639 Msa0340610:CDS
TGATGAGATGGACACTGGTG+CGG 0.692205 2_4:-61955225 Msa0340610:CDS
AGGAAAATAATGGATCGAGA+AGG 0.695902 2_4:-61957087 Msa0340610:CDS
GGTGATGTTAGTGAACGACT+CGG 0.703227 2_4:-61954883 Msa0340610:CDS
GTATATTCACAATCGTATGG+GGG 0.712886 2_4:-61954693 Msa0340610:three_prime_UTR
AACATAGTACTATTGGCCAG+AGG 0.720267 2_4:-61955265 Msa0340610:CDS
ATCAGGAACAGAAAGCTCAG+TGG 0.724457 2_4:-61957701 Msa0340610:CDS
GAACTTTGGAGATAAACACA+CGG 0.732827 2_4:+61960142 None:intergenic
TGAGCATGCAAGAAATCACG+AGG 0.733970 2_4:-61960067 Msa0340610:CDS
AGGCGATTGATATAATACCG+AGG 0.744393 2_4:+61960671 None:intergenic
GATGAATGGATTCTAAACAA+TGG 0.756119 2_4:-61955311 Msa0340610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATCAAAATCCATTTTTT+AGG - chr2_4:61954536-61954555 Msa0340610:three_prime_UTR 15.0%
!!! TTATCAAAATCCATTTTTTA+GGG - chr2_4:61954537-61954556 Msa0340610:three_prime_UTR 15.0%
!!! TGTTTTTTTGTTATATTTGT+TGG - chr2_4:61954922-61954941 Msa0340610:CDS 15.0%
!! GATAAAATTTAATTAAAGAG+TGG - chr2_4:61955100-61955119 Msa0340610:CDS 15.0%
!! GATTAATAGTTAATAATTAG+AGG - chr2_4:61955132-61955151 Msa0340610:CDS 15.0%
!! TTTATATTAATTGTGAGTTA+TGG + chr2_4:61957593-61957612 None:intergenic 15.0%
!!! TTAAATTTTTTTTGCATGTT+AGG + chr2_4:61957829-61957848 None:intergenic 15.0%
!! TAATAATGATGATTACATAT+TGG - chr2_4:61958724-61958743 Msa0340610:intron 15.0%
!! GATATCATTAATAAATGAAA+AGG - chr2_4:61958946-61958965 Msa0340610:intron 15.0%
!! TAAATAAATATACAGAAATC+AGG + chr2_4:61959630-61959649 None:intergenic 15.0%
!!! AAGGTATACATTTTAAAATA+TGG + chr2_4:61959742-61959761 None:intergenic 15.0%
!!! TTAGATAATTTAAAATACAG+TGG - chr2_4:61959794-61959813 Msa0340610:intron 15.0%
!! TTATAATGAAATTGTTTCAA+CGG - chr2_4:61960506-61960525 Msa0340610:CDS 15.0%
!! ATTTAATTATAACATCTCTT+GGG + chr2_4:61962171-61962190 None:intergenic 15.0%
!! AATTTAATTATAACATCTCT+TGG + chr2_4:61962172-61962191 None:intergenic 15.0%
!! AAAAAAAACAAAGCAAAGTT+GGG + chr2_4:61954375-61954394 None:intergenic 20.0%
!! TAAAAAACATTTCAAAAGGA+AGG + chr2_4:61954697-61954716 None:intergenic 20.0%
!! TGTCTAAAAAACATTTCAAA+AGG + chr2_4:61954701-61954720 None:intergenic 20.0%
!!! TAGTATTTATTTTCTCTCAT+CGG - chr2_4:61954779-61954798 Msa0340610:CDS 20.0%
!!! TTATATTTGTTGGATTTTGA+TGG - chr2_4:61954932-61954951 Msa0340610:CDS 20.0%
!! AGATAATTTCAATCTTCAAA+AGG + chr2_4:61954990-61955009 None:intergenic 20.0%
!!! TGAAGATTGAAATTATCTTT+TGG - chr2_4:61954992-61955011 Msa0340610:CDS 20.0%
!!! GAAGATTGAAATTATCTTTT+GGG - chr2_4:61954993-61955012 Msa0340610:CDS 20.0%
!! AAAATTTAATTAAAGAGTGG+TGG - chr2_4:61955103-61955122 Msa0340610:CDS 20.0%
!!! TATTTTGTAGATTTTTCCTT+AGG - chr2_4:61955492-61955511 Msa0340610:CDS 20.0%
!!! ATTTTGTAGATTTTTCCTTA+GGG - chr2_4:61955493-61955512 Msa0340610:CDS 20.0%
!!! TTTTGAGTATACAAACTTAT+AGG - chr2_4:61955566-61955585 Msa0340610:CDS 20.0%
!! AATTATCTTTAACGTCAAAA+AGG + chr2_4:61957671-61957690 None:intergenic 20.0%
!!! AGCATATTTTGCTAAATAAT+GGG - chr2_4:61957784-61957803 Msa0340610:CDS 20.0%
!! TACTAGAATACAAATTAAAG+AGG - chr2_4:61958430-61958449 Msa0340610:intron 20.0%
!! ACTAGAATACAAATTAAAGA+GGG - chr2_4:61958431-61958450 Msa0340610:intron 20.0%
!! TCATTAATAAATGAAAAGGA+TGG - chr2_4:61958950-61958969 Msa0340610:intron 20.0%
!! GATAATAAAACTCATTCATT+AGG + chr2_4:61959068-61959087 None:intergenic 20.0%
!! TTAAAAATGATTGTGAATCA+TGG - chr2_4:61959290-61959309 Msa0340610:intron 20.0%
!! TAAAAATGATTGTGAATCAT+GGG - chr2_4:61959291-61959310 Msa0340610:intron 20.0%
!!! CAATTTTTGTTAGTTATTGA+CGG - chr2_4:61959409-61959428 Msa0340610:intron 20.0%
!! AAAAAAAAAAGTTGAATCTC+AGG + chr2_4:61959455-61959474 None:intergenic 20.0%
!! TGTATATTTATTTATTGACC+TGG - chr2_4:61959636-61959655 Msa0340610:intron 20.0%
!! TAGTATAAAATAACCTGTTT+GGG + chr2_4:61960342-61960361 None:intergenic 20.0%
!! TTAGTATAAAATAACCTGTT+TGG + chr2_4:61960343-61960362 None:intergenic 20.0%
!! TCAAAAACATAAAACATCTT+TGG + chr2_4:61960747-61960766 None:intergenic 20.0%
!!! ATTTTCATTGATTTCTTGTA+TGG + chr2_4:61961013-61961032 None:intergenic 20.0%
!! ATATAGTTTATAATAACCTG+TGG + chr2_4:61961589-61961608 None:intergenic 20.0%
! GAAAAAAAACAAAGCAAAGT+TGG + chr2_4:61954376-61954395 None:intergenic 25.0%
! AATGAAGTGGTTTCTATAAA+AGG + chr2_4:61954402-61954421 None:intergenic 25.0%
! AATTGTTGAACCCTAAAAAA+TGG + chr2_4:61954550-61954569 None:intergenic 25.0%
!!! GAAATTATCTTTTGGGTATT+TGG - chr2_4:61955000-61955019 Msa0340610:CDS 25.0%
!!! TTTTTAGTTGTTGATGATTG+TGG - chr2_4:61955454-61955473 Msa0340610:CDS 25.0%
!! TTTTGTAGATTTTTCCTTAG+GGG - chr2_4:61955494-61955513 Msa0340610:CDS 25.0%
!!! TGTGAATTTTTTTACGTAGA+AGG - chr2_4:61955624-61955643 Msa0340610:CDS 25.0%
!! GAATACCCTTTTTATTCTAA+GGG - chr2_4:61955675-61955694 Msa0340610:CDS 25.0%
! ATGCAAATAACTTAAGTTCT+AGG - chr2_4:61956075-61956094 Msa0340610:intron 25.0%
! TACATAATTACCCATATCAA+AGG + chr2_4:61956135-61956154 None:intergenic 25.0%
! AGCATTTGATCTAGTAAATA+AGG + chr2_4:61956326-61956345 None:intergenic 25.0%
!! ACATTTAGATTTTCTACAGA+AGG - chr2_4:61956371-61956390 Msa0340610:intron 25.0%
! GTAGAACAGAAATAAATTGA+AGG + chr2_4:61956796-61956815 None:intergenic 25.0%
! TGATAAGCATTTAAGGAATT+TGG - chr2_4:61956849-61956868 Msa0340610:intron 25.0%
!! AATCTGTTTGGAAATTGTTT+TGG - chr2_4:61956899-61956918 Msa0340610:intron 25.0%
! ATTTCTATGGATGTGTATAT+CGG - chr2_4:61957131-61957150 Msa0340610:intron 25.0%
! TATCTATGTTCGAATAAATC+AGG - chr2_4:61957313-61957332 Msa0340610:intron 25.0%
!! ATTGGTGGTTATTGATTATT+GGG + chr2_4:61957561-61957580 None:intergenic 25.0%
!! AATTGGTGGTTATTGATTAT+TGG + chr2_4:61957562-61957581 None:intergenic 25.0%
! TTATGGAAGTTATAAATTGG+TGG + chr2_4:61957576-61957595 None:intergenic 25.0%
! GAGTTATGGAAGTTATAAAT+TGG + chr2_4:61957579-61957598 None:intergenic 25.0%
! AAAATATGCTCTTCATAATC+CGG + chr2_4:61957774-61957793 None:intergenic 25.0%
!! GAGCATATTTTGCTAAATAA+TGG - chr2_4:61957783-61957802 Msa0340610:CDS 25.0%
!! GTCTTTTATGAATCTTATAG+CGG + chr2_4:61957962-61957981 None:intergenic 25.0%
! CTATATAACTGATAAAGTGA+TGG - chr2_4:61958505-61958524 Msa0340610:intron 25.0%
! TTTCTTCCTATCAATATGAA+AGG - chr2_4:61958752-61958771 Msa0340610:intron 25.0%
! TTCTTCCTATCAATATGAAA+GGG - chr2_4:61958753-61958772 Msa0340610:intron 25.0%
! AGAAAATTTGTAAGAGTTTG+AGG - chr2_4:61958822-61958841 Msa0340610:intron 25.0%
! AAAAATGATTGTGAATCATG+GGG - chr2_4:61959292-61959311 Msa0340610:intron 25.0%
!! CTATAAAGGAGTATACTAAT+GGG - chr2_4:61959363-61959382 Msa0340610:intron 25.0%
!! TATAAAGGAGTATACTAATG+GGG - chr2_4:61959364-61959383 Msa0340610:intron 25.0%
!!! TTCAACTTTTTTTTTTGTGC+AGG - chr2_4:61959459-61959478 Msa0340610:intron 25.0%
!!! TTTTTTGTGCAGGAAAATAA+TGG - chr2_4:61959469-61959488 Msa0340610:intron 25.0%
! TAATCCAAAATAAATAAGCC+AGG + chr2_4:61959657-61959676 None:intergenic 25.0%
!!! GGCTTATTTATTTTGGATTA+TGG - chr2_4:61959657-61959676 Msa0340610:intron 25.0%
! TTAATCCAAACACAACATTA+AGG + chr2_4:61959761-61959780 None:intergenic 25.0%
! CAACAAATTAATTAAGCATG+CGG + chr2_4:61959844-61959863 None:intergenic 25.0%
! TTAAGCATATATGAGAGTTA+GGG + chr2_4:61960068-61960087 None:intergenic 25.0%
!! CATCACAAGAAATTTTATTC+AGG + chr2_4:61960296-61960315 None:intergenic 25.0%
! AGTATAAAATAACCTGTTTG+GGG + chr2_4:61960341-61960360 None:intergenic 25.0%
!!! TTGGATAAGAGATTTTAAGA+AGG + chr2_4:61960397-61960416 None:intergenic 25.0%
! ATTCACTTTATTAATCTTGC+GGG + chr2_4:61960887-61960906 None:intergenic 25.0%
! GATTCACTTTATTAATCTTG+CGG + chr2_4:61960888-61960907 None:intergenic 25.0%
! AGTGAAGATTCAAAATCATT+TGG - chr2_4:61961180-61961199 Msa0340610:intron 25.0%
! AGATTCAAAATCATTTGGAA+TGG - chr2_4:61961185-61961204 Msa0340610:intron 25.0%
! AAACGTAAACATAGTACTAT+TGG - chr2_4:61961294-61961313 Msa0340610:intron 25.0%
! TTTGGAAATATTGAATGACA+TGG - chr2_4:61961719-61961738 Msa0340610:five_prime_UTR 25.0%
! TTGGAAATATTGAATGACAT+GGG - chr2_4:61961720-61961739 Msa0340610:five_prime_UTR 25.0%
!! TGATAAGGTTGTTCAAATTT+TGG - chr2_4:61961941-61961960 Msa0340610:intron 25.0%
!! GATAAGGTTGTTCAAATTTT+GGG - chr2_4:61961942-61961961 Msa0340610:intron 25.0%
AAGCAGTTAAAGAAATGAAG+TGG + chr2_4:61954415-61954434 None:intergenic 30.0%
CATTTCAAAAGGAAGGTAAA+GGG + chr2_4:61954690-61954709 None:intergenic 30.0%
ACATTTCAAAAGGAAGGTAA+AGG + chr2_4:61954691-61954710 None:intergenic 30.0%
! GAAACTGGGTGTATTTTATA+CGG - chr2_4:61954816-61954835 Msa0340610:CDS 30.0%
!!! AAATATCAGTGCTGATCTTT+TGG - chr2_4:61954857-61954876 Msa0340610:CDS 30.0%
!!! TTTTGATGGCTTGTTGTTTA+AGG - chr2_4:61954946-61954965 Msa0340610:CDS 30.0%
GAACTAGAGAATCAAAATTC+AGG + chr2_4:61955075-61955094 None:intergenic 30.0%
!! GTGCACAAACAATTTTAACA+CGG - chr2_4:61955259-61955278 Msa0340610:CDS 30.0%
!! TGCACAAACAATTTTAACAC+GGG - chr2_4:61955260-61955279 Msa0340610:CDS 30.0%
!! AAAAAGGGTATTCCATACTT+TGG + chr2_4:61955668-61955687 None:intergenic 30.0%
! GGAATACCCTTTTTATTCTA+AGG - chr2_4:61955674-61955693 Msa0340610:CDS 30.0%
ATGAACTTTGATACTTATGC+TGG - chr2_4:61955813-61955832 Msa0340610:intron 30.0%
CGGTGGAAATTACAATAATT+TGG - chr2_4:61955974-61955993 Msa0340610:intron 30.0%
! AATTTTCTCCCCAAAAATAG+GGG + chr2_4:61956006-61956025 None:intergenic 30.0%
! CAATTTTCTCCCCAAAAATA+GGG + chr2_4:61956007-61956026 None:intergenic 30.0%
! ACAATTTTCTCCCCAAAAAT+AGG + chr2_4:61956008-61956027 None:intergenic 30.0%
! TGATTCTTTAAAGAAGGACA+AGG + chr2_4:61956225-61956244 None:intergenic 30.0%
TGGATTGTAATAACCAACAT+TGG + chr2_4:61956462-61956481 None:intergenic 30.0%
! TGTTGGTTATTACAATCCAA+AGG - chr2_4:61956463-61956482 Msa0340610:intron 30.0%
TGCAAAAAGGAAAGTTTGAA+TGG + chr2_4:61956681-61956700 None:intergenic 30.0%
TATTTGTATCTATATTGCCC+TGG - chr2_4:61956824-61956843 Msa0340610:intron 30.0%
CTTAAATGCTTATCAAACCA+GGG + chr2_4:61956844-61956863 None:intergenic 30.0%
TTATCTTTACATCACCATTC+AGG - chr2_4:61956962-61956981 Msa0340610:intron 30.0%
GTCTCAATACAAAGATATCA+CGG - chr2_4:61956993-61957012 Msa0340610:CDS 30.0%
TCTCAATACAAAGATATCAC+GGG - chr2_4:61956994-61957013 Msa0340610:CDS 30.0%
! AAAGTATCTTATGTGTTCGT+TGG - chr2_4:61957039-61957058 Msa0340610:CDS 30.0%
CTTAGGCAGAAAAATTTCTA+TGG - chr2_4:61957118-61957137 Msa0340610:intron 30.0%
TTTCTATGGATGTGTATATC+GGG - chr2_4:61957132-61957151 Msa0340610:intron 30.0%
TATGCATCCAATATTCATTG+CGG - chr2_4:61957258-61957277 Msa0340610:intron 30.0%
TACCAGTTATAACAGTTTCT+TGG + chr2_4:61957295-61957314 None:intergenic 30.0%
TCAGGATAAAACAGAATTTG+TGG - chr2_4:61957331-61957350 Msa0340610:intron 30.0%
AAAAGGACAAAATACAAGAG+AGG + chr2_4:61957654-61957673 None:intergenic 30.0%
! ATGGTCTTTGAGAAAGATAT+AGG + chr2_4:61958018-61958037 None:intergenic 30.0%
TATTATATCACAACTGAAGG+TGG - chr2_4:61958121-61958140 Msa0340610:CDS 30.0%
TAAATTTACAAGCTGCAGAA+AGG + chr2_4:61958170-61958189 None:intergenic 30.0%
TTCTGCAGCTTGTAAATTTA+AGG - chr2_4:61958170-61958189 Msa0340610:CDS 30.0%
CATGTTTAAGAAAATACCTC+AGG + chr2_4:61958220-61958239 None:intergenic 30.0%
!!! CATGAATTTTATTTTCCCAC+TGG - chr2_4:61958236-61958255 Msa0340610:CDS 30.0%
! ATAACTGATAAAGTGATGGA+AGG - chr2_4:61958509-61958528 Msa0340610:intron 30.0%
! ACTCTTACAAATTTTCTGCA+TGG + chr2_4:61958819-61958838 None:intergenic 30.0%
GAATGACTAGCAAATGTATT+TGG - chr2_4:61959156-61959175 Msa0340610:intron 30.0%
TAAAATTGCATCTCTATCTG+AGG - chr2_4:61959258-61959277 Msa0340610:intron 30.0%
! TGATAGAGGTTTCGTATTTT+TGG + chr2_4:61959330-61959349 None:intergenic 30.0%
ACACTTCATGTATGCTATAA+AGG - chr2_4:61959349-61959368 Msa0340610:intron 30.0%
! GCTATAAAGGAGTATACTAA+TGG - chr2_4:61959362-61959381 Msa0340610:intron 30.0%
! TTGACCTGGCTTATTTATTT+TGG - chr2_4:61959650-61959669 Msa0340610:intron 30.0%
TGCATTTGCTTGAGTTATAT+AGG - chr2_4:61959706-61959725 Msa0340610:intron 30.0%
ATTTGCTTGAGTTATATAGG+TGG - chr2_4:61959709-61959728 Msa0340610:intron 30.0%
GTATACCTTAATGTTGTGTT+TGG - chr2_4:61959753-61959772 Msa0340610:intron 30.0%
GTTAAGCATATATGAGAGTT+AGG + chr2_4:61960069-61960088 None:intergenic 30.0%
GTAAGATGTGTTAGTGTAAT+TGG - chr2_4:61960206-61960225 Msa0340610:CDS 30.0%
TTTCAAAACTTGATCTCAAG+AGG - chr2_4:61960234-61960253 Msa0340610:CDS 30.0%
TCTCTTATCCAAACACATTT+AGG - chr2_4:61960405-61960424 Msa0340610:CDS 30.0%
TCTCAAAACCTAAATGTGTT+TGG + chr2_4:61960416-61960435 None:intergenic 30.0%
!!! AAACACATTTAGGTTTTGAG+AGG - chr2_4:61960415-61960434 Msa0340610:CDS 30.0%
TAGAAGTAGTAAACTATGGA+AGG + chr2_4:61960457-61960476 None:intergenic 30.0%
TTCCATAGTTTACTACTTCT+AGG - chr2_4:61960456-61960475 Msa0340610:CDS 30.0%
!! TGTTTTAGATAGAACAGTCA+CGG + chr2_4:61960705-61960724 None:intergenic 30.0%
AAACATCTTTGGACAATGAA+AGG + chr2_4:61960736-61960755 None:intergenic 30.0%
TGAGAATTCGGAAAATAAGT+TGG - chr2_4:61961116-61961135 Msa0340610:intron 30.0%
! AATTCGGAAAATAAGTTGGA+GGG - chr2_4:61961120-61961139 Msa0340610:intron 30.0%
! TTCATCACATTTTGCAAGAA+CGG + chr2_4:61961241-61961260 None:intergenic 30.0%
TTCTTGCAAAATGTGATGAA+TGG - chr2_4:61961241-61961260 Msa0340610:intron 30.0%
! GATGAATGGATTCTAAACAA+TGG - chr2_4:61961255-61961274 Msa0340610:intron 30.0%
!! AAATCAACCATAGTTGATAG+CGG - chr2_4:61961501-61961520 Msa0340610:intron 30.0%
AGTTTATAATAACCTGTGGA+TGG + chr2_4:61961585-61961604 None:intergenic 30.0%
GCAAGATTTAAACTACAAGA+CGG - chr2_4:61961621-61961640 Msa0340610:intron 30.0%
ATCTAGATGATGAAGAAGAA+TGG - chr2_4:61961661-61961680 Msa0340610:intron 30.0%
TCTAGATGATGAAGAAGAAT+GGG - chr2_4:61961662-61961681 Msa0340610:intron 30.0%
TGGAAATATTGAATGACATG+GGG - chr2_4:61961721-61961740 Msa0340610:five_prime_UTR 30.0%
! TTGCTTAGACAAGATTTTGA+TGG - chr2_4:61961851-61961870 Msa0340610:intron 30.0%
ATGGTATATTCACAATCGTA+TGG - chr2_4:61961870-61961889 Msa0340610:intron 30.0%
TGGTATATTCACAATCGTAT+GGG - chr2_4:61961871-61961890 Msa0340610:intron 30.0%
CACCATATACAGAACTATAA+GGG + chr2_4:61962036-61962055 None:intergenic 30.0%
ACACCATATACAGAACTATA+AGG + chr2_4:61962037-61962056 None:intergenic 30.0%
! GAAAAGAAAAGTGTACAAAG+TGG - chr2_4:61962210-61962229 Msa0340610:five_prime_UTR 30.0%
GGTTGCTATAAATGGTATGA+CGG + chr2_4:61954331-61954350 None:intergenic 35.0%
! CGATTTGAGGTTGCTATAAA+TGG + chr2_4:61954339-61954358 None:intergenic 35.0%
!!! ATCTTCGAGGATTTTAAGGT+CGG - chr2_4:61954496-61954515 Msa0340610:three_prime_UTR 35.0%
TATAGAATGTGTTCGGGATA+CGG + chr2_4:61954744-61954763 None:intergenic 35.0%
TATCCCGAACACATTCTATA+CGG - chr2_4:61954744-61954763 Msa0340610:exon 35.0%
AAAGCCGTATAGAATGTGTT+CGG + chr2_4:61954751-61954770 None:intergenic 35.0%
AATCCGAACATACTGAAACT+GGG - chr2_4:61954802-61954821 Msa0340610:CDS 35.0%
TCCTTCAAAACCTGAATGTT+GGG + chr2_4:61954893-61954912 None:intergenic 35.0%
TTCCTTCAAAACCTGAATGT+TGG + chr2_4:61954894-61954913 None:intergenic 35.0%
!! GTATTTGGTGTATAGCTTTG+AGG - chr2_4:61955015-61955034 Msa0340610:CDS 35.0%
!! AATTAAAGAGTGGTGGATGA+TGG - chr2_4:61955110-61955129 Msa0340610:CDS 35.0%
!! GCACAAACAATTTTAACACG+GGG - chr2_4:61955261-61955280 Msa0340610:CDS 35.0%
CAAACTTATAGGCTTCAAGA+AGG - chr2_4:61955577-61955596 Msa0340610:CDS 35.0%
CGTAGAAGGACTCTAATAAT+CGG - chr2_4:61955638-61955657 Msa0340610:CDS 35.0%
ATAATCGGTTGACCAAAGTA+TGG - chr2_4:61955653-61955672 Msa0340610:CDS 35.0%
!! TACCCTTTTTATTCTAAGGG+AGG - chr2_4:61955678-61955697 Msa0340610:CDS 35.0%
CTCCTCCCTTAGAATAAAAA+GGG + chr2_4:61955683-61955702 None:intergenic 35.0%
ATTCCACCATCTAATGATGT+TGG + chr2_4:61955747-61955766 None:intergenic 35.0%
!! AGATGGTGGAATCAACAATT+TGG - chr2_4:61955755-61955774 Msa0340610:intron 35.0%
AGTATCAAAGTTCATGAGCT+CGG + chr2_4:61955808-61955827 None:intergenic 35.0%
CTCATTGGTCATAATCTGAT+CGG + chr2_4:61955862-61955881 None:intergenic 35.0%
GTATTATATCAATCGCCTGA+TGG - chr2_4:61955900-61955919 Msa0340610:intron 35.0%
AGTGGACAATTCTATATGAC+AGG - chr2_4:61955945-61955964 Msa0340610:intron 35.0%
GAAAATTGTGAGTCAGCAAA+TGG - chr2_4:61956019-61956038 Msa0340610:intron 35.0%
GTTGTCTAAGAAACCAAGTA+GGG + chr2_4:61956048-61956067 None:intergenic 35.0%
TGTTGTCTAAGAAACCAAGT+AGG + chr2_4:61956049-61956068 None:intergenic 35.0%
ACATGTCAATGCCTTTGATA+TGG - chr2_4:61956121-61956140 Msa0340610:intron 35.0%
CATGTCAATGCCTTTGATAT+GGG - chr2_4:61956122-61956141 Msa0340610:intron 35.0%
! TCCTTCTTTAAAGAATCAGC+TGG - chr2_4:61956227-61956246 Msa0340610:intron 35.0%
! ACCAGCTGATTCTTTAAAGA+AGG + chr2_4:61956231-61956250 None:intergenic 35.0%
! TTCTTTAAAGAATCAGCTGG+TGG - chr2_4:61956230-61956249 Msa0340610:intron 35.0%
! TCTTTAAAGAATCAGCTGGT+GGG - chr2_4:61956231-61956250 Msa0340610:intron 35.0%
ACTTGACCATCATGCTTTAT+GGG + chr2_4:61956281-61956300 None:intergenic 35.0%
TACTTGACCATCATGCTTTA+TGG + chr2_4:61956282-61956301 None:intergenic 35.0%
TTACTAGATCAAATGCTTGC+AGG - chr2_4:61956329-61956348 Msa0340610:intron 35.0%
TACTAGATCAAATGCTTGCA+GGG - chr2_4:61956330-61956349 Msa0340610:intron 35.0%
! TTTTCTACAGAAGGAAAACC+AGG - chr2_4:61956380-61956399 Msa0340610:intron 35.0%
! GAACTTTGGAGATAAACACA+CGG + chr2_4:61956427-61956446 None:intergenic 35.0%
GAGAGTTGGAAATCATTTGT+CGG - chr2_4:61956624-61956643 Msa0340610:intron 35.0%
AGTTTGAATGGAAACAGGAA+AGG + chr2_4:61956669-61956688 None:intergenic 35.0%
AGGAAAGTTTGAATGGAAAC+AGG + chr2_4:61956674-61956693 None:intergenic 35.0%
CTGTGTATACTGTATGTGAA+GGG + chr2_4:61956757-61956776 None:intergenic 35.0%
ACTGTGTATACTGTATGTGA+AGG + chr2_4:61956758-61956777 None:intergenic 35.0%
CCTTAAATGCTTATCAAACC+AGG + chr2_4:61956845-61956864 None:intergenic 35.0%
! CCTGGTTTGATAAGCATTTA+AGG - chr2_4:61956842-61956861 Msa0340610:intron 35.0%
AACAGATTTGATCACGTTGT+GGG + chr2_4:61956887-61956906 None:intergenic 35.0%
AAACAGATTTGATCACGTTG+TGG + chr2_4:61956888-61956907 None:intergenic 35.0%
ACAACGTGATCAAATCTGTT+TGG - chr2_4:61956887-61956906 Msa0340610:intron 35.0%
CTCAATACAAAGATATCACG+GGG - chr2_4:61956995-61957014 Msa0340610:CDS 35.0%
GAACACATAAGATACTTTGC+CGG + chr2_4:61957037-61957056 None:intergenic 35.0%
ATGTTTCCTGTCTTTGCATT+AGG - chr2_4:61957160-61957179 Msa0340610:intron 35.0%
TGTTTCCTGTCTTTGCATTA+GGG - chr2_4:61957161-61957180 Msa0340610:intron 35.0%
ATATGAGCCGCAATGAATAT+TGG + chr2_4:61957268-61957287 None:intergenic 35.0%
GACCAAGAAACTGTTATAAC+TGG - chr2_4:61957290-61957309 Msa0340610:intron 35.0%
ATGTAGACTATACAGAGACA+AGG - chr2_4:61957447-61957466 Msa0340610:intron 35.0%
ACAAGGATAGTGTAGTTACA+AGG - chr2_4:61957464-61957483 Msa0340610:intron 35.0%
! AAGCTCTCAAATTCTAGGAA+GGG + chr2_4:61957527-61957546 None:intergenic 35.0%
! GTGGTTATTGATTATTGGGA+AGG + chr2_4:61957557-61957576 None:intergenic 35.0%
TCCAAGACTACAGAAATACA+AGG - chr2_4:61957722-61957741 Msa0340610:CDS 35.0%
ACAATCCCCAATAATAGATC+CGG - chr2_4:61957876-61957895 Msa0340610:CDS 35.0%
GGAATTAGATGCTTCTAATG+TGG + chr2_4:61957941-61957960 None:intergenic 35.0%
GCGTATTATATCACAACTGA+AGG - chr2_4:61958118-61958137 Msa0340610:CDS 35.0%
CTAAGAAGTGAAAAACCAGT+GGG + chr2_4:61958254-61958273 None:intergenic 35.0%
TCTAAGAAGTGAAAAACCAG+TGG + chr2_4:61958255-61958274 None:intergenic 35.0%
! GGTTAAAGCAGCTCTTTTAT+TGG + chr2_4:61958309-61958328 None:intergenic 35.0%
TTCACGTCAGAATAGAAGAA+AGG + chr2_4:61958611-61958630 None:intergenic 35.0%
TGACTCCCTTTCATATTGAT+AGG + chr2_4:61958761-61958780 None:intergenic 35.0%
TTCTGTTCAGAAGCTATCAT+TGG - chr2_4:61958973-61958992 Msa0340610:intron 35.0%
AAACTCATTCATTAGGCCAA+AGG + chr2_4:61959061-61959080 None:intergenic 35.0%
TGCTAGTCATTCTCATTTCT+GGG + chr2_4:61959148-61959167 None:intergenic 35.0%
TTGCTAGTCATTCTCATTTC+TGG + chr2_4:61959149-61959168 None:intergenic 35.0%
!! AGGAAAATAATGGATCGAGA+AGG - chr2_4:61959479-61959498 Msa0340610:intron 35.0%
!! ATACTTTTCTGGTAGTCTGA+AGG - chr2_4:61959561-61959580 Msa0340610:intron 35.0%
GAAATCAGGACAAATAACGT+TGG + chr2_4:61959616-61959635 None:intergenic 35.0%
AAAGATGGACATAGTGTAGT+TGG + chr2_4:61959960-61959979 None:intergenic 35.0%
! AAAAGTCTCGATTTTGTCTG+GGG + chr2_4:61960096-61960115 None:intergenic 35.0%
! CAAAAGTCTCGATTTTGTCT+GGG + chr2_4:61960097-61960116 None:intergenic 35.0%
! TCAAAAGTCTCGATTTTGTC+TGG + chr2_4:61960098-61960117 None:intergenic 35.0%
CTACATTCCATATAGAGAAG+CGG + chr2_4:61960163-61960182 None:intergenic 35.0%
CATCTTACTATCAATCGTTG+TGG + chr2_4:61960194-61960213 None:intergenic 35.0%
AGATGTGTTAGTGTAATTGG+TGG - chr2_4:61960209-61960228 Msa0340610:CDS 35.0%
TGCCTAGAAGTAGTAAACTA+TGG + chr2_4:61960461-61960480 None:intergenic 35.0%
TCAAGTGATGCTTAATACAC+AGG + chr2_4:61960550-61960569 None:intergenic 35.0%
! ATATCCTTTTCAGAGTTGTC+GGG + chr2_4:61960834-61960853 None:intergenic 35.0%
! CATATCCTTTTCAGAGTTGT+CGG + chr2_4:61960835-61960854 None:intergenic 35.0%
ACTTTATTAATCTTGCGGGA+TGG + chr2_4:61960883-61960902 None:intergenic 35.0%
TATTTCACAAGATGCTGTCT+CGG - chr2_4:61961080-61961099 Msa0340610:intron 35.0%
! GAATTCGGAAAATAAGTTGG+AGG - chr2_4:61961119-61961138 Msa0340610:intron 35.0%
! TAAGTTGGAGGGAAAATTGA+AGG - chr2_4:61961131-61961150 Msa0340610:intron 35.0%
GCAATTGATCGAACAAGTAT+TGG + chr2_4:61961160-61961179 None:intergenic 35.0%
! GAATGGATTCTAAACAATGG+CGG - chr2_4:61961258-61961277 Msa0340610:intron 35.0%
!! AACTATGGTTGATTTGCCTT+TGG + chr2_4:61961496-61961515 None:intergenic 35.0%
!! AATCAACCATAGTTGATAGC+GGG - chr2_4:61961502-61961521 Msa0340610:intron 35.0%
TGGATCAAACTTGAAACGAA+TGG + chr2_4:61961565-61961584 None:intergenic 35.0%
CATCATCTAGATATTTGAGC+TGG + chr2_4:61961653-61961672 None:intergenic 35.0%
AATATCACGAACAAGAAACC+TGG + chr2_4:61961757-61961776 None:intergenic 35.0%
GGTATATTCACAATCGTATG+GGG - chr2_4:61961872-61961891 Msa0340610:intron 35.0%
GTATATTCACAATCGTATGG+GGG - chr2_4:61961873-61961892 Msa0340610:intron 35.0%
!! GGTTGTTCAAATTTTGGGTA+AGG - chr2_4:61961947-61961966 Msa0340610:intron 35.0%
CATATACAGAACTATAAGGG+AGG + chr2_4:61962033-61962052 None:intergenic 35.0%
! CTCCCTTATAGTTCTGTATA+TGG - chr2_4:61962031-61962050 Msa0340610:intron 35.0%
TGTAGTAAGTAGTAGTAGTG+AGG - chr2_4:61962088-61962107 Msa0340610:five_prime_UTR 35.0%
ACGTAAGATTCAGCGATTTG+AGG + chr2_4:61954352-61954371 None:intergenic 40.0%
!! AGCTCTGAAGTGAAGTGAAA+GGG + chr2_4:61954441-61954460 None:intergenic 40.0%
CAAAGATTTCGTCATCTTCG+AGG - chr2_4:61954483-61954502 Msa0340610:three_prime_UTR 40.0%
! CGTCATCTTCGAGGATTTTA+AGG - chr2_4:61954492-61954511 Msa0340610:three_prime_UTR 40.0%
AAGCCGTATAGAATGTGTTC+GGG + chr2_4:61954750-61954769 None:intergenic 40.0%
GAATCCGAACATACTGAAAC+TGG - chr2_4:61954801-61954820 Msa0340610:CDS 40.0%
ACACCCAGTTTCAGTATGTT+CGG + chr2_4:61954808-61954827 None:intergenic 40.0%
!! GTGCTGATCTTTTGGAGATT+TGG - chr2_4:61954865-61954884 Msa0340610:CDS 40.0%
CCTTCAAAACCTGAATGTTG+GGG + chr2_4:61954892-61954911 None:intergenic 40.0%
!! TGGTGTATAGCTTTGAGGTA+TGG - chr2_4:61955020-61955039 Msa0340610:CDS 40.0%
!! GGTGTATAGCTTTGAGGTAT+GGG - chr2_4:61955021-61955040 Msa0340610:CDS 40.0%
!! TATAGCTTTGAGGTATGGGA+AGG - chr2_4:61955025-61955044 Msa0340610:CDS 40.0%
GGGAAGGAACTATAGAGTAT+AGG - chr2_4:61955041-61955060 Msa0340610:CDS 40.0%
ATTAGAGGACTTCAGCTCAA+TGG - chr2_4:61955147-61955166 Msa0340610:CDS 40.0%
! GTGTTTTACATATGCAGCAC+AGG - chr2_4:61955285-61955304 Msa0340610:CDS 40.0%
CCTCCTCCCTTAGAATAAAA+AGG + chr2_4:61955684-61955703 None:intergenic 40.0%
!! CCTTTTTATTCTAAGGGAGG+AGG - chr2_4:61955681-61955700 Msa0340610:CDS 40.0%
! TATTCTAAGGGAGGAGGAAT+TGG - chr2_4:61955687-61955706 Msa0340610:CDS 40.0%
! ATTCTAAGGGAGGAGGAATT+GGG - chr2_4:61955688-61955707 Msa0340610:CDS 40.0%
!! ACTTATGCTGGTTTGTGTTC+TGG - chr2_4:61955825-61955844 Msa0340610:intron 40.0%
TAATCTGATCGGTCATGGAT+GGG + chr2_4:61955851-61955870 None:intergenic 40.0%
ATAATCTGATCGGTCATGGA+TGG + chr2_4:61955852-61955871 None:intergenic 40.0%
TATAATACCGAGGCAAGAGA+TGG + chr2_4:61955888-61955907 None:intergenic 40.0%
AGGCGATTGATATAATACCG+AGG + chr2_4:61955898-61955917 None:intergenic 40.0%
GGACAATTCTATATGACAGG+AGG - chr2_4:61955948-61955967 Msa0340610:intron 40.0%
TTCTATATGACAGGAGGAGT+CGG - chr2_4:61955954-61955973 Msa0340610:intron 40.0%
! TTGGAAAGCTCCCCTATTTT+TGG - chr2_4:61955993-61956012 Msa0340610:intron 40.0%
!! TGGAAAGCTCCCCTATTTTT+GGG - chr2_4:61955994-61956013 Msa0340610:intron 40.0%
TGGGTAATTATGTAATCGCC+AGG - chr2_4:61956141-61956160 Msa0340610:intron 40.0%
! CTTTAAAGAATCAGCTGGTG+GGG - chr2_4:61956232-61956251 Msa0340610:intron 40.0%
TTTAAAGAATCAGCTGGTGG+GGG - chr2_4:61956233-61956252 Msa0340610:intron 40.0%
GGGAATATTGGCACAAGTTT+GGG - chr2_4:61956253-61956272 Msa0340610:intron 40.0%
TAGTAAATAAGGTTGCTCGC+TGG + chr2_4:61956315-61956334 None:intergenic 40.0%
AGGAAAACCAGGTTGTATAC+CGG - chr2_4:61956391-61956410 Msa0340610:intron 40.0%
!! ACAATCCAAAGGAGTACTTG+AGG - chr2_4:61956474-61956493 Msa0340610:intron 40.0%
!! CAATCCAAAGGAGTACTTGA+GGG - chr2_4:61956475-61956494 Msa0340610:intron 40.0%
CCAGAGTGCAGATCAAATAT+GGG + chr2_4:61956545-61956564 None:intergenic 40.0%
TCCAGAGTGCAGATCAAATA+TGG + chr2_4:61956546-61956565 None:intergenic 40.0%
CTTGGAACTTGTCACTACAA+AGG - chr2_4:61956583-61956602 Msa0340610:intron 40.0%
!! GCTTGATTTTGACAGAGAGT+TGG - chr2_4:61956610-61956629 Msa0340610:intron 40.0%
AATCATTTGTCGGTCACTTC+AGG - chr2_4:61956634-61956653 Msa0340610:intron 40.0%
! GAGACAGAGAAAGTGCAAAA+AGG + chr2_4:61956694-61956713 None:intergenic 40.0%
! GAGTCTGATAGAAGTTGATC+TGG - chr2_4:61956729-61956748 Msa0340610:intron 40.0%
TGAGACATCTAAGTCCTGAA+TGG + chr2_4:61956979-61956998 None:intergenic 40.0%
! CACGGGGAATTTTTGTAGTT+TGG - chr2_4:61957011-61957030 Msa0340610:CDS 40.0%
! GGGAATTTTTGTAGTTTGGC+CGG - chr2_4:61957015-61957034 Msa0340610:CDS 40.0%
!! CTTATGTGTTCGTTGGTGAT+TGG - chr2_4:61957046-61957065 Msa0340610:CDS 40.0%
TACAATGTTGTTCCACACCA+CGG - chr2_4:61957085-61957104 Msa0340610:CDS 40.0%
GTTTCCTGTCTTTGCATTAG+GGG - chr2_4:61957162-61957181 Msa0340610:intron 40.0%
!!! TTTTGAGACAACTCTGCAGA+GGG + chr2_4:61957371-61957390 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG - chr2_4:61957496-61957515 Msa0340610:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG + chr2_4:61957500-61957519 None:intergenic 40.0%
! CAAGCTCTCAAATTCTAGGA+AGG + chr2_4:61957528-61957547 None:intergenic 40.0%
CTTCCTAGAATTTGAGAGCT+TGG - chr2_4:61957526-61957545 Msa0340610:intron 40.0%
AGACCAAGCTCTCAAATTCT+AGG + chr2_4:61957532-61957551 None:intergenic 40.0%
! GCCTTGTATTTCTGTAGTCT+TGG + chr2_4:61957726-61957745 None:intergenic 40.0%
TCTTCAATCCATCTGCAATC+CGG - chr2_4:61957752-61957771 Msa0340610:CDS 40.0%
TTCATAATCCGGATTGCAGA+TGG + chr2_4:61957763-61957782 None:intergenic 40.0%
!! TTGCTAAATAATGGGCAGCT+TGG - chr2_4:61957792-61957811 Msa0340610:CDS 40.0%
!!! TTTTTTGCATGTTAGGCGTG+AGG + chr2_4:61957822-61957841 None:intergenic 40.0%
TCATCAACAATCTCCAACCT+AGG + chr2_4:61957902-61957921 None:intergenic 40.0%
GAATCAACTGAGATATGCGA+TGG + chr2_4:61958037-61958056 None:intergenic 40.0%
TAAGGACTACTGTGTCTTCT+CGG - chr2_4:61958188-61958207 Msa0340610:CDS 40.0%
TTATTGGTCGAAAGACACTG+CGG + chr2_4:61958293-61958312 None:intergenic 40.0%
TCGTAACACATCCACTATCT+CGG + chr2_4:61958330-61958349 None:intergenic 40.0%
TCATGCACATAGATTGCCAT+TGG - chr2_4:61958358-61958377 Msa0340610:intron 40.0%
!!! ATTCCCTGTTTTTACACCGA+CGG - chr2_4:61958392-61958411 Msa0340610:intron 40.0%
ATGCATTGAACATCCTCTTG+AGG - chr2_4:61958544-61958563 Msa0340610:intron 40.0%
ATTGAACATCCTCTTGAGGA+AGG - chr2_4:61958548-61958567 Msa0340610:intron 40.0%
TTGAACATCCTCTTGAGGAA+GGG - chr2_4:61958549-61958568 Msa0340610:intron 40.0%
CGTCAGAATAGAAGAAAGGA+TGG + chr2_4:61958607-61958626 None:intergenic 40.0%
TCATGCACGCAAGTTCAATT+TGG - chr2_4:61958664-61958683 Msa0340610:intron 40.0%
CATGCACGCAAGTTCAATTT+GGG - chr2_4:61958665-61958684 Msa0340610:intron 40.0%
CTCTTATTAGACAACCTCTC+AGG - chr2_4:61958791-61958810 Msa0340610:intron 40.0%
AAGAGTTTGAGGACAGTTTC+AGG - chr2_4:61958833-61958852 Msa0340610:intron 40.0%
!! GTTTCAGGTGCTGAAATATC+AGG - chr2_4:61958848-61958867 Msa0340610:intron 40.0%
GCTTCTAACCTGAGAAACAA+TGG - chr2_4:61958998-61959017 Msa0340610:intron 40.0%
AAACGAGCCTTCTTGTAATC+AGG - chr2_4:61959021-61959040 Msa0340610:intron 40.0%
GGGTAAACCTGATTACAAGA+AGG + chr2_4:61959031-61959050 None:intergenic 40.0%
ATTAGGCCAAAGGATAGTAG+GGG + chr2_4:61959051-61959070 None:intergenic 40.0%
CATTAGGCCAAAGGATAGTA+GGG + chr2_4:61959052-61959071 None:intergenic 40.0%
TCATTAGGCCAAAGGATAGT+AGG + chr2_4:61959053-61959072 None:intergenic 40.0%
! CTAGTCATTCTCATTTCTGG+GGG + chr2_4:61959146-61959165 None:intergenic 40.0%
GCTAGTCATTCTCATTTCTG+GGG + chr2_4:61959147-61959166 None:intergenic 40.0%
GCATACATGAAGTGTGATAG+AGG + chr2_4:61959344-61959363 None:intergenic 40.0%
! GTTCTCCAGCAATACTTTTC+TGG - chr2_4:61959550-61959569 Msa0340610:intron 40.0%
!! GACTACCAGAAAAGTATTGC+TGG + chr2_4:61959558-61959577 None:intergenic 40.0%
! AAGGATGCTGCAAAAAGCAT+TGG - chr2_4:61959580-61959599 Msa0340610:intron 40.0%
!! TGCAAAAAGCATTGGTGGTT+AGG - chr2_4:61959588-61959607 Msa0340610:intron 40.0%
!! CTTTGCTTTTATGTTGTGGC+TGG + chr2_4:61959927-61959946 None:intergenic 40.0%
!! GAGGCTTTGCTTTTATGTTG+TGG + chr2_4:61959931-61959950 None:intergenic 40.0%
!! ATAGTGTAGTTGGTAAGAGG+AGG + chr2_4:61959950-61959969 None:intergenic 40.0%
!! GACATAGTGTAGTTGGTAAG+AGG + chr2_4:61959953-61959972 None:intergenic 40.0%
AGGGTAGCTATAGCTAAAGA+TGG + chr2_4:61959975-61959994 None:intergenic 40.0%
! CTTTTCTACACCATCATCTG+CGG - chr2_4:61960008-61960027 Msa0340610:CDS 40.0%
! TTTTCTACACCATCATCTGC+GGG - chr2_4:61960009-61960028 Msa0340610:CDS 40.0%
AGCATATATGAGAGTTAGGG+AGG + chr2_4:61960065-61960084 None:intergenic 40.0%
CCATATAGAGAAGCGGTATA+TGG + chr2_4:61960156-61960175 None:intergenic 40.0%
CCATATACCGCTTCTCTATA+TGG - chr2_4:61960153-61960172 Msa0340610:CDS 40.0%
GATAGAACAGTCACGGTAAA+TGG + chr2_4:61960698-61960717 None:intergenic 40.0%
! CAACTCTGAAAAGGATATGC+AGG - chr2_4:61960836-61960855 Msa0340610:CDS 40.0%
AAAAGGATATGCAGGCATCA+CGG - chr2_4:61960844-61960863 Msa0340610:CDS 40.0%
GAAGAAAATTCAGACTGTGC+TGG - chr2_4:61960915-61960934 Msa0340610:exon 40.0%
GTTGAAGTTTGATCCTTCCT+CGG - chr2_4:61960963-61960982 Msa0340610:five_prime_UTR 40.0%
TTGAAGTTTGATCCTTCCTC+GGG - chr2_4:61960964-61960983 Msa0340610:five_prime_UTR 40.0%
TCTTGTGTAGTACTTCTCTC+GGG + chr2_4:61961051-61961070 None:intergenic 40.0%
GTCTTGTGTAGTACTTCTCT+CGG + chr2_4:61961052-61961071 None:intergenic 40.0%
GAGACAGCATCTTGTGAAAT+AGG + chr2_4:61961081-61961100 None:intergenic 40.0%
TGTCCTGAACAAGCTTGTAA+TGG - chr2_4:61961213-61961232 Msa0340610:intron 40.0%
AACATAGTACTATTGGCCAG+AGG - chr2_4:61961301-61961320 Msa0340610:intron 40.0%
!! TTCCTTTGCTGTTGATGAGA+TGG - chr2_4:61961329-61961348 Msa0340610:intron 40.0%
TCAAGCTTGAAGAAGTAGGA+TGG + chr2_4:61961395-61961414 None:intergenic 40.0%
TCTGTCAAGCTTGAAGAAGT+AGG + chr2_4:61961399-61961418 None:intergenic 40.0%
AGCTTGACAGATTCGTCTAA+TGG - chr2_4:61961408-61961427 Msa0340610:intron 40.0%
!! ATGGTTGATTTGCCTTTGGA+TGG + chr2_4:61961492-61961511 None:intergenic 40.0%
TTTAGACCCGCTATCAACTA+TGG + chr2_4:61961511-61961530 None:intergenic 40.0%
! TTCAAGTTTGATCCATCCAC+AGG - chr2_4:61961570-61961589 Msa0340610:intron 40.0%
CGTGATATTCCTTGTACGTT+TGG - chr2_4:61961768-61961787 Msa0340610:five_prime_UTR 40.0%
ACAACCTTATCATTGTGTCG+AGG + chr2_4:61961933-61961952 None:intergenic 40.0%
!! CAGCTCTGAAGTGAAGTGAA+AGG + chr2_4:61954442-61954461 None:intergenic 45.0%
! AGATTTGGTCCCCAACATTC+AGG - chr2_4:61954880-61954899 Msa0340610:CDS 45.0%
!! CCCCAACATTCAGGTTTTGA+AGG - chr2_4:61954889-61954908 Msa0340610:CDS 45.0%
GCTGCAGAGTTGAACTTGTA+AGG + chr2_4:61955423-61955442 None:intergenic 45.0%
CTTATAGGCTTCAAGAAGGC+TGG - chr2_4:61955581-61955600 Msa0340610:CDS 45.0%
GAAGGGCCAACATCATTAGA+TGG - chr2_4:61955738-61955757 Msa0340610:CDS 45.0%
GGTCATAATCTGATCGGTCA+TGG + chr2_4:61955856-61955875 None:intergenic 45.0%
TCGACTGGATTGAATCCATC+AGG + chr2_4:61955918-61955937 None:intergenic 45.0%
AATCCAGTCGAACAGAACAG+TGG - chr2_4:61955927-61955946 Msa0340610:intron 45.0%
!!! GGAAAGCTCCCCTATTTTTG+GGG - chr2_4:61955995-61956014 Msa0340610:intron 45.0%
CAGCAAATGGATACCCTACT+TGG - chr2_4:61956032-61956051 Msa0340610:intron 45.0%
!! AGGCATTGACATGTTGCGAA+GGG + chr2_4:61956115-61956134 None:intergenic 45.0%
!! AAGGCATTGACATGTTGCGA+AGG + chr2_4:61956116-61956135 None:intergenic 45.0%
TCATCAAGTGACAAAGCAGG+TGG + chr2_4:61956188-61956207 None:intergenic 45.0%
CTCTCATCAAGTGACAAAGC+AGG + chr2_4:61956191-61956210 None:intergenic 45.0%
GGGGAATATTGGCACAAGTT+TGG - chr2_4:61956252-61956271 Msa0340610:intron 45.0%
TGGGTACCCATAAAGCATGA+TGG - chr2_4:61956272-61956291 Msa0340610:intron 45.0%
!! CAGGGTATCGTGAAGTTTCA+AGG - chr2_4:61956348-61956367 Msa0340610:intron 45.0%
GGAAAACCAGGTTGTATACC+GGG - chr2_4:61956392-61956411 Msa0340610:intron 45.0%
TTATCTCCAAAGTTCCCGAG+TGG - chr2_4:61956432-61956451 Msa0340610:intron 45.0%
ACCAACATTGGAAGTCCACT+CGG + chr2_4:61956450-61956469 None:intergenic 45.0%
TGAGCATGCAAGAAATCACG+AGG - chr2_4:61956499-61956518 Msa0340610:intron 45.0%
CCCATATTTGATCTGCACTC+TGG - chr2_4:61956542-61956561 Msa0340610:intron 45.0%
AGTTCCAAGACAGCAGAACA+TGG + chr2_4:61956572-61956591 None:intergenic 45.0%
ATTTGTCGGTCACTTCAGGT+AGG - chr2_4:61956638-61956657 Msa0340610:intron 45.0%
!! TGTGTTCGTTGGTGATTGGT+CGG - chr2_4:61957050-61957069 Msa0340610:CDS 45.0%
CTATGGATGTGTATATCGGG+TGG - chr2_4:61957135-61957154 Msa0340610:intron 45.0%
ATGACCCCTAATGCAAAGAC+AGG + chr2_4:61957169-61957188 None:intergenic 45.0%
!!! GTTTTGAGACAACTCTGCAG+AGG + chr2_4:61957372-61957391 None:intergenic 45.0%
GCAGAGTTGTCTCAAAACAG+AGG - chr2_4:61957374-61957393 Msa0340610:intron 45.0%
CTAGGCCGGATCTATTATTG+GGG + chr2_4:61957884-61957903 None:intergenic 45.0%
CCTAGGCCGGATCTATTATT+GGG + chr2_4:61957885-61957904 None:intergenic 45.0%
ACCTAGGCCGGATCTATTAT+TGG + chr2_4:61957886-61957905 None:intergenic 45.0%
ATAATAGATCCGGCCTAGGT+TGG - chr2_4:61957886-61957905 Msa0340610:CDS 45.0%
AGATGCTTCTAATGTGGACC+TGG + chr2_4:61957935-61957954 None:intergenic 45.0%
! AGCTGCTTTAACCGAGATAG+TGG - chr2_4:61958316-61958335 Msa0340610:intron 45.0%
GATTGCCATTGGCACTAACA+TGG - chr2_4:61958369-61958388 Msa0340610:CDS 45.0%
GGAATCCATGTTAGTGCCAA+TGG + chr2_4:61958377-61958396 None:intergenic 45.0%
AGTTACATCTCTTGTGCCGT+CGG + chr2_4:61958411-61958430 None:intergenic 45.0%
TTGCGTGCATGATGAACAAG+CGG + chr2_4:61958656-61958675 None:intergenic 45.0%
! TTTTCTGCATGGTACCTGAG+AGG + chr2_4:61958808-61958827 None:intergenic 45.0%
ATCAGGAACAGAAAGCTCAG+TGG - chr2_4:61958865-61958884 Msa0340610:intron 45.0%
TGAGAGTTCCTCGTAGATGT+GGG + chr2_4:61958926-61958945 None:intergenic 45.0%
! GCTCGTTTCCATTGTTTCTC+AGG + chr2_4:61959009-61959028 None:intergenic 45.0%
GGTTTACCCCTACTATCCTT+TGG - chr2_4:61959042-61959061 Msa0340610:intron 45.0%
!! GATGCTGCAAAAAGCATTGG+TGG - chr2_4:61959583-61959602 Msa0340610:intron 45.0%
!! GAAAAGGCTGTGCTGGTTTA+GGG + chr2_4:61959994-61960013 None:intergenic 45.0%
!! AGAAAAGGCTGTGCTGGTTT+AGG + chr2_4:61959995-61960014 None:intergenic 45.0%
! CGCAGATGATGGTGTAGAAA+AGG + chr2_4:61960010-61960029 None:intergenic 45.0%
! TCTCGATTTTGTCTGGGGAA+GGG + chr2_4:61960091-61960110 None:intergenic 45.0%
! CTGTTTGGGGTAGTTGAAAC+AGG + chr2_4:61960328-61960347 None:intergenic 45.0%
CTGTTTCAACTACCCCAAAC+AGG - chr2_4:61960326-61960345 Msa0340610:CDS 45.0%
! TTTGCCCGACAACTCTGAAA+AGG - chr2_4:61960827-61960846 Msa0340610:CDS 45.0%
GGCATCACGGAATTTCAAGA+TGG - chr2_4:61960857-61960876 Msa0340610:CDS 45.0%
TAGTACTTCTCTCGGGGAAA+AGG + chr2_4:61961044-61961063 None:intergenic 45.0%
CTTGTGTAGTACTTCTCTCG+GGG + chr2_4:61961050-61961069 None:intergenic 45.0%
GCCTAGTGAAGGTGAGAATT+CGG - chr2_4:61961104-61961123 Msa0340610:intron 45.0%
TCCGAATTCTCACCTTCACT+AGG + chr2_4:61961108-61961127 None:intergenic 45.0%
! GAGCCATTACAAGCTTGTTC+AGG + chr2_4:61961219-61961238 None:intergenic 45.0%
GTCCATCTCATCAACAGCAA+AGG + chr2_4:61961334-61961353 None:intergenic 45.0%
ACAGATTCGTCTAATGGCTC+TGG - chr2_4:61961414-61961433 Msa0340610:intron 45.0%
! GGCTCTGGTTCAATGATACA+TGG - chr2_4:61961429-61961448 Msa0340610:intron 45.0%
AAGAACCAGAAGCCATCCAA+AGG - chr2_4:61961477-61961496 Msa0340610:intron 45.0%
ATTTGCCTTTGGATGGCTTC+TGG + chr2_4:61961485-61961504 None:intergenic 45.0%
!! TGATAGCGGGTCTAAAATCG+TGG - chr2_4:61961515-61961534 Msa0340610:intron 45.0%
ATCGTGGTGAAAGCTACCTA+TGG - chr2_4:61961531-61961550 Msa0340610:intron 45.0%
ACGAATGGTGTCTTCTCCAT+AGG + chr2_4:61961550-61961569 None:intergenic 45.0%
GGTGATGTTAGTGAACGACT+CGG - chr2_4:61961683-61961702 Msa0340610:intron 45.0%
CTCGGATTTGCAAGTGTGTT+TGG - chr2_4:61961701-61961720 Msa0340610:five_prime_UTR 45.0%
TCCAAGTCCAAACTCCACAT+GGG - chr2_4:61961988-61962007 Msa0340610:intron 45.0%
AGTAGTAGTAGTGAGGACTG+TGG - chr2_4:61962095-61962114 Msa0340610:five_prime_UTR 45.0%
GTAGTGAGGACTGTGGTAAA+TGG - chr2_4:61962102-61962121 Msa0340610:five_prime_UTR 45.0%
!!! TTTAATTAAATTTTATCTTT+TGG + chr2_4:61955097-61955116 None:intergenic 5.0%
!!! AAATTTTAATTTTTCAATTT+AGG + chr2_4:61957193-61957212 None:intergenic 5.0%
GCGATTGAGCATAACCCCTA+AGG + chr2_4:61955511-61955530 None:intergenic 50.0%
TTCAAGAAGGCTGGCGAACA+AGG - chr2_4:61955590-61955609 Msa0340610:CDS 50.0%
AGGGAGGAGGAATTGGGTAT+TGG - chr2_4:61955694-61955713 Msa0340610:CDS 50.0%
!! ATTGGGTATTGGCAGTCTCC+TGG - chr2_4:61955705-61955724 Msa0340610:CDS 50.0%
TCTCCTGGAACTCAGTTCGA+AGG - chr2_4:61955720-61955739 Msa0340610:CDS 50.0%
CTCCTGGAACTCAGTTCGAA+GGG - chr2_4:61955721-61955740 Msa0340610:CDS 50.0%
GGGCCAACATCATTAGATGG+TGG - chr2_4:61955741-61955760 Msa0340610:CDS 50.0%
ATGAGCTCGGAGAAGCTGTT+AGG + chr2_4:61955795-61955814 None:intergenic 50.0%
GGCAAGAGATGGAAGCTCAT+TGG + chr2_4:61955877-61955896 None:intergenic 50.0%
TGAGCTTCCATCTCTTGCCT+CGG - chr2_4:61955878-61955897 Msa0340610:intron 50.0%
TGTCCACTGTTCTGTTCGAC+TGG + chr2_4:61955933-61955952 None:intergenic 50.0%
TATATGACAGGAGGAGTCGG+TGG - chr2_4:61955957-61955976 Msa0340610:intron 50.0%
GGAGATTAAAGCTTGTGGCC+TGG + chr2_4:61956162-61956181 None:intergenic 50.0%
! GGCCACAAGCTTTAATCTCC+AGG - chr2_4:61956162-61956181 Msa0340610:intron 50.0%
GGCCTGGAGATTAAAGCTTG+TGG + chr2_4:61956167-61956186 None:intergenic 50.0%
ATCAGCTGGTGGGGGAATAT+TGG - chr2_4:61956241-61956260 Msa0340610:intron 50.0%
TTGGAGATAAACACACGGCC+AGG + chr2_4:61956422-61956441 None:intergenic 50.0%
CCAACATTGGAAGTCCACTC+GGG + chr2_4:61956449-61956468 None:intergenic 50.0%
TCAGCCCTCAAGTACTCCTT+TGG + chr2_4:61956482-61956501 None:intergenic 50.0%
GCAAGAAATCACGAGGTTCG+TGG - chr2_4:61956506-61956525 Msa0340610:intron 50.0%
ACTGCCATGTTCTGCTGTCT+TGG - chr2_4:61956565-61956584 Msa0340610:intron 50.0%
CCCAATAATAGATCCGGCCT+AGG - chr2_4:61957882-61957901 Msa0340610:CDS 50.0%
CAACAATCTCCAACCTAGGC+CGG + chr2_4:61957898-61957917 None:intergenic 50.0%
! GTTGATGAGCGTTCAATGCC+AGG - chr2_4:61957914-61957933 Msa0340610:CDS 50.0%
GTGCCGTCGGTGTAAAAACA+GGG + chr2_4:61958398-61958417 None:intergenic 50.0%
TGTGCCGTCGGTGTAAAAAC+AGG + chr2_4:61958399-61958418 None:intergenic 50.0%
CATCCTCTTGAGGAAGGGAA+AGG - chr2_4:61958554-61958573 Msa0340610:intron 50.0%
ACACCTTTCCCTTCCTCAAG+AGG + chr2_4:61958560-61958579 None:intergenic 50.0%
! AGGAAGGGAAAGGTGTAGCT+GGG - chr2_4:61958564-61958583 Msa0340610:intron 50.0%
CTGCAGTTGCAATCAGGCTA+AGG - chr2_4:61958690-61958709 Msa0340610:intron 50.0%
AGGAACAGAAAGCTCAGTGG+CGG - chr2_4:61958868-61958887 Msa0340610:intron 50.0%
TAGATGTGGGGGGGAAACTT+GGG + chr2_4:61958913-61958932 None:intergenic 50.0%
AGAGTTCCTCGTAGATGTGG+GGG + chr2_4:61958924-61958943 None:intergenic 50.0%
GAGAGTTCCTCGTAGATGTG+GGG + chr2_4:61958925-61958944 None:intergenic 50.0%
CTGAGAGTTCCTCGTAGATG+TGG + chr2_4:61958927-61958946 None:intergenic 50.0%
! TGGCTGGTGACGATGTACAA+CGG + chr2_4:61959911-61959930 None:intergenic 50.0%
TGGTGTAGAAAAGGCTGTGC+TGG + chr2_4:61960001-61960020 None:intergenic 50.0%
TATGAGAGTTAGGGAGGCAG+AGG + chr2_4:61960059-61960078 None:intergenic 50.0%
! GTCTCGATTTTGTCTGGGGA+AGG + chr2_4:61960092-61960111 None:intergenic 50.0%
ACTGTGCTGGACTCTGTTCA+GGG - chr2_4:61960928-61960947 Msa0340610:five_prime_UTR 50.0%
GACTCTGTTCAGGGAGTTGA+AGG - chr2_4:61960937-61960956 Msa0340610:five_prime_UTR 50.0%
TCTGTTCAGGGAGTTGAAGG+CGG - chr2_4:61960940-61960959 Msa0340610:five_prime_UTR 50.0%
CAGCAAAGGAACTTGTCCTC+TGG + chr2_4:61961320-61961339 None:intergenic 50.0%
! GCTGTTGATGAGATGGACAC+TGG - chr2_4:61961336-61961355 Msa0340610:intron 50.0%
TGATGAGATGGACACTGGTG+CGG - chr2_4:61961341-61961360 Msa0340610:intron 50.0%
ACATGGGGACACATAATGCC+AGG - chr2_4:61961736-61961755 Msa0340610:five_prime_UTR 50.0%
TGGCAGTAGCAGTTGCTACT+TGG - chr2_4:61961797-61961816 Msa0340610:intron 50.0%
! GGCAGTAGCAGTTGCTACTT+GGG - chr2_4:61961798-61961817 Msa0340610:intron 50.0%
! AGTAGCAGTTGCTACTTGGG+AGG - chr2_4:61961801-61961820 Msa0340610:intron 50.0%
CGAGCCTCGACACAATGATA+AGG - chr2_4:61961926-61961945 Msa0340610:intron 50.0%
CTCCAAGTCCAAACTCCACA+TGG - chr2_4:61961987-61962006 Msa0340610:intron 50.0%
CCAAGTCCAAACTCCACATG+GGG - chr2_4:61961989-61962008 Msa0340610:intron 50.0%
TGAACAAAGCTCTCCCCATG+TGG + chr2_4:61962005-61962024 None:intergenic 50.0%
TGTGTTCGGGATACGGTGTC+TGG + chr2_4:61954737-61954756 None:intergenic 55.0%
AAGTGACAAAGCAGGTGGCC+TGG + chr2_4:61956183-61956202 None:intergenic 55.0%
GGAAGACCCGGTATACAACC+TGG + chr2_4:61956401-61956420 None:intergenic 55.0%
GGTTGTATACCGGGTCTTCC+TGG - chr2_4:61956401-61956420 Msa0340610:intron 55.0%
GGAAGTCCACTCGGGAACTT+TGG + chr2_4:61956441-61956460 None:intergenic 55.0%
! CCCGAGTGGACTTCCAATGT+TGG - chr2_4:61956446-61956465 Msa0340610:intron 55.0%
GTTGTTCCACACCACGGTTG+AGG - chr2_4:61957091-61957110 Msa0340610:intron 55.0%
!! ACCACGGTTGAGGAGCACTT+AGG - chr2_4:61957101-61957120 Msa0340610:intron 55.0%
! GAGGAAGGGAAAGGTGTAGC+TGG - chr2_4:61958563-61958582 Msa0340610:intron 55.0%
! TGGGTGCTGCAGTTGCAATC+AGG - chr2_4:61958684-61958703 Msa0340610:intron 55.0%
GGAACAGAAAGCTCAGTGGC+GGG - chr2_4:61958869-61958888 Msa0340610:intron 55.0%
GAACAGAAAGCTCAGTGGCG+GGG - chr2_4:61958870-61958889 Msa0340610:intron 55.0%
GTAGATGTGGGGGGGAAACT+TGG + chr2_4:61958914-61958933 None:intergenic 55.0%
AGTTCCTCGTAGATGTGGGG+GGG + chr2_4:61958922-61958941 None:intergenic 55.0%
GAGTTCCTCGTAGATGTGGG+GGG + chr2_4:61958923-61958942 None:intergenic 55.0%
! CTGGTGACGATGTACAACGG+TGG + chr2_4:61959908-61959927 None:intergenic 55.0%
CATCGATCACCCGCAGATGA+TGG + chr2_4:61960021-61960040 None:intergenic 55.0%
!! GGCAGAGGAGAAGGTGTTTG+TGG + chr2_4:61960044-61960063 None:intergenic 55.0%
AGTTAGGGAGGCAGAGGAGA+AGG + chr2_4:61960053-61960072 None:intergenic 55.0%
GACTGTGCTGGACTCTGTTC+AGG - chr2_4:61960927-61960946 Msa0340610:five_prime_UTR 55.0%
CTGTTCAGGGAGTTGAAGGC+GGG - chr2_4:61960941-61960960 Msa0340610:five_prime_UTR 55.0%
!! TCCTTCCTCGGGAGCATTTG+TGG - chr2_4:61960975-61960994 Msa0340610:five_prime_UTR 55.0%
AGATGGACACTGGTGCGGAT+GGG - chr2_4:61961346-61961365 Msa0340610:intron 55.0%
CCAGAGCTGCCAAACGTACA+AGG + chr2_4:61961780-61961799 None:intergenic 55.0%
CCTTGTACGTTTGGCAGCTC+TGG - chr2_4:61961777-61961796 Msa0340610:intron 55.0%
CCCCATGTGGAGTTTGGACT+TGG + chr2_4:61961992-61962011 None:intergenic 55.0%
AGCTCTCCCCATGTGGAGTT+TGG + chr2_4:61961998-61962017 None:intergenic 55.0%
GGCCCTTCGAACTGAGTTCC+AGG + chr2_4:61955726-61955745 None:intergenic 60.0%
AACACACGGCCAGGAAGACC+CGG + chr2_4:61956413-61956432 None:intergenic 60.0%
AGTGCTCCTCAACCGTGGTG+TGG + chr2_4:61957100-61957119 None:intergenic 60.0%
GCCTAAGTGCTCCTCAACCG+TGG + chr2_4:61957105-61957124 None:intergenic 60.0%
GTCTTCTCGGCTGCTTCCTG+AGG - chr2_4:61958201-61958220 Msa0340610:CDS 60.0%
! GAAAGCTCAGTGGCGGGGTT+TGG - chr2_4:61958875-61958894 Msa0340610:intron 60.0%
GTTTCCCCCCCACATCTACG+AGG - chr2_4:61958915-61958934 Msa0340610:intron 60.0%
GCCACAAATGCTCCCGAGGA+AGG + chr2_4:61960979-61960998 None:intergenic 60.0%
!! TCCTCGGGAGCATTTGTGGC+AGG - chr2_4:61960979-61960998 Msa0340610:five_prime_UTR 60.0%
TCCTGCCACAAATGCTCCCG+AGG + chr2_4:61960983-61961002 None:intergenic 60.0%
!! TCGGGAGCATTTGTGGCAGG+AGG - chr2_4:61960982-61961001 Msa0340610:intron 60.0%
!! CGGGAGCATTTGTGGCAGGA+GGG - chr2_4:61960983-61961002 Msa0340610:intron 60.0%
!! GCTGTCTCGGTGCCTAGTGA+AGG - chr2_4:61961093-61961112 Msa0340610:intron 60.0%
GAGATGGACACTGGTGCGGA+TGG - chr2_4:61961345-61961364 Msa0340610:intron 60.0%
GATGGACACTGGTGCGGATG+GGG - chr2_4:61961347-61961366 Msa0340610:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 61954322 61962266 61954322 ID=Msa0340610;Name=Msa0340610
chr2_4 mRNA 61954322 61962266 61954322 ID=Msa0340610-mRNA-1;Parent=Msa0340610;Name=Msa0340610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=377|1|1|1|0.66|0.71|7|433|968
chr2_4 exon 61954322 61955761 61954322 ID=Msa0340610-mRNA-1:exon:19626;Parent=Msa0340610-mRNA-1
chr2_4 exon 61956984 61957107 61956984 ID=Msa0340610-mRNA-1:exon:19625;Parent=Msa0340610-mRNA-1
chr2_4 exon 61957546 61958292 61957546 ID=Msa0340610-mRNA-1:exon:19624;Parent=Msa0340610-mRNA-1
chr2_4 exon 61958366 61958410 61958366 ID=Msa0340610-mRNA-1:exon:19623;Parent=Msa0340610-mRNA-1
chr2_4 exon 61959933 61961000 61959933 ID=Msa0340610-mRNA-1:exon:19622;Parent=Msa0340610-mRNA-1
chr2_4 exon 61961687 61961787 61961687 ID=Msa0340610-mRNA-1:exon:19621;Parent=Msa0340610-mRNA-1
chr2_4 exon 61962075 61962266 61962075 ID=Msa0340610-mRNA-1:exon:19620;Parent=Msa0340610-mRNA-1
chr2_4 five_prime_UTR 61962075 61962266 61962075 ID=Msa0340610-mRNA-1:five_prime_utr;Parent=Msa0340610-mRNA-1
chr2_4 five_prime_UTR 61961687 61961787 61961687 ID=Msa0340610-mRNA-1:five_prime_utr;Parent=Msa0340610-mRNA-1
chr2_4 five_prime_UTR 61960917 61961000 61960917 ID=Msa0340610-mRNA-1:five_prime_utr;Parent=Msa0340610-mRNA-1
chr2_4 CDS 61959933 61960916 61959933 ID=Msa0340610-mRNA-1:cds;Parent=Msa0340610-mRNA-1
chr2_4 CDS 61958366 61958410 61958366 ID=Msa0340610-mRNA-1:cds;Parent=Msa0340610-mRNA-1
chr2_4 CDS 61957546 61958292 61957546 ID=Msa0340610-mRNA-1:cds;Parent=Msa0340610-mRNA-1
chr2_4 CDS 61956984 61957107 61956984 ID=Msa0340610-mRNA-1:cds;Parent=Msa0340610-mRNA-1
chr2_4 CDS 61954755 61955761 61954755 ID=Msa0340610-mRNA-1:cds;Parent=Msa0340610-mRNA-1
chr2_4 three_prime_UTR 61954322 61954754 61954322 ID=Msa0340610-mRNA-1:three_prime_utr;Parent=Msa0340610-mRNA-1
Gene Sequence

>Msa0340610

ATGGAATACCCTTTTTATTCTAAGGGAGGAGGAATTGGGTATTGGCAGTCTCCTGGAACTCAGTTCGAAGGGCCAACATCATTAGATGGTGGAATCAACAATTTGGTGTCAGAAGATATGCCTAACAGCTTCTCCGAGCTCATGAACTTTGATACTTATGCTGGTTTGTGTTCTGGCCCATCCATGACCGATCAGATTATGACCAATGAGCTTCCATCTCTTGCCTCGGTATTATATCAATCGCCTGATGGATTCAATCCAGTCGAACAGAACAGTGGACAATTCTATATGACAGGAGGAGTCGGTGGAAATTACAATAATTTGGAAAGCTCCCCTATTTTTGGGGAGAAAATTGTGAGTCAGCAAATGGATACCCTACTTGGTTTCTTAGACAACAGCAATGATGCAAATAACTTAAGTTCTAGGCAAAAATTTGACGACCCTTCGCAACATGTCAATGCCTTTGATATGGGTAATTATGTAATCGCCAGGCCACAAGCTTTAATCTCCAGGCCACCTGCTTTGTCACTTGATGAGAGAATGCTGAAAGCCTTGTCCTTCTTTAAAGAATCAGCTGGTGGGGGAATATTGGCACAAGTTTGGGTACCCATAAAGCATGATGGTCAAGTACTCTTAAGCACCAGCGAGCAACCTTATTTACTAGATCAAATGCTTGCAGGGTATCGTGAAGTTTCAAGGACATTTAGATTTTCTACAGAAGGAAAACCAGGTTGTATACCGGGTCTTCCTGGCCGTGTGTTTATCTCCAAAGTTCCCGAGTGGACTTCCAATGTTGGTTATTACAATCCAAAGGAGTACTTGAGGGCTGAGCATGCAAGAAATCACGAGGTTCGTGGATCAATTGCTTTTCCCATATTTGATCTGCACTCTGGACTGCCATGTTCTGCTGTCTTGGAACTTGTCACTACAAAGGAAAAGCTTGATTTTGACAGAGAGTTGGAAATCATTTGTCGGTCACTTCAGCTTGTAAATTTAAGGACTACTGTGTCTTCTCGGCTGCTTCCTGAGTGTCTTTCGACCAATAAAAGAGCTGCTTTAACCGAGATAGTGGATGTGTTACGATCTGTGTGTCATGCACATAGATTGCCATTGGCACTAACATGGATTCCCTGTTTTTACACCGACGGCACAAGAGATGTAACTACTAGAATACAAATTAAAGAGGGTAATTCAAGTTCTAGAGAAAAAAACATACTGTGTATTGAAGAATCAGCTTGCTATATAACTGATAAAGTGATGGAAGGATTTGTGCGTGCATGCATTGAACATCCTCTTGAGGAAGGGAAAGGTGTAGCTGGGAAAGCACTTCAATCAAACCATCCTTTCTTCTATTCTGACGTGAAAACATATGATATTAGTGAGTATCCGCTTGTTCATCATGCACGCAAGTTCAATTTGGGTGCTGCAGTTGCAATCAGGCTAAGGAGTATTTATACTAATAATGATGATTACATATTGGAATTCTTTCTTCCTATCAATATGAAAGGGAGTCAAGAACAGCAACTCTTATTAGACAACCTCTCAGGTACCATGCAGAAAATTTGTAAGAGTTTGAGGACAGTTTCAGGTGCTGAAATATCAGGAACAGAAAGCTCAGTGGCGGGGTTTGGAAAGAAAAATGTCCCAAGTTTCCCCCCCACATCTACGAGGAACTCTCAGATATCATTAATAAATGAAAAGGATGGTTCTGTTCAGAAGCTATCATTGGATGCTTCTAACCTGAGAAACAATGGAAACGAGCCTTCTTGTAATCAGGAAAATAATGGATCGAGAAGGCGAGTTGAGAAAAAAAGAAACACATCAGAGAAGAATGTTAGCTTGAGTGTTCTCCAGCAATACTTTTCTGGTAGTCTGAAGGATGCTGCAAAAAGCATTGGTGTTTGCCCGACAACTCTGAAAAGGATATGCAGGCATCACGGAATTTCAAGATGGCCATCCCGCAAGATTAATAAAGTGAATCGATCTTTGAAGAAAATTCAGACTGTGCTGGACTCTGTTCAGGGAGTTGAAGGCGGGTTGAAGTTTGATCCTTCCTCGGGAGCATTTGTGGCAGGAGGGACAACCATACAAGAAATCAATGAAAATAGAAGTCTCCTTTTCCCCGAGAGAAGTACTACACAAGACTCTGAGCCTATTTCACAAGATGCTGTCTCGGTGCCTAGTGAAGGTGAGAATTCGGAAAATAAGTTGGAGGGAAAATTGAAGGAAACCAATACTTGTTCGATCAATTGCAGTGAAGATTCAAAATCATTTGGAATGGATGATTGTCCTGAACAAGCTTGTAATGGCTCCGTTCTTGCAAAATGTGATGAATGGATTCTAAACAATGGCGGTTTGAGAGAAGAAAAACGTAAACATAGTACTATTGGCCAGAGGACAAGTTCCTTTGCTGTTGATGAGATGGACACTGGTGCGGATGGGGATGATGATGTTGTTGAACACAACCATCCTACTTCTTCAAGCTTGACAGATTCGTCTAATGGCTCTGGTTCAATGATACATGGCAGTTCATCAGATTATCAGAACTTTAAGAACCAGAAGCCATCCAAAGGCAAATCAACCATAGTTGATAGCGGGTCTAAAATCGTGGTGAAAGCTACCTATGGAGAAGACACCATTCGTTTCAAGTTTGATCCATCCACAGGTTATTATAAACTATATGAAGAAGTTGCAGCAAGATTTAAACTACAAGACGGATCATTCCAGCTCAAATATCTAGATGATGAAGAAGAATGGGTGATGTTAGTGAACGACTCGGATTTGCAAGTGTGTTTGGAAATATTGAATGACATGGGGACACATAATGCCAGGTTTCTTGTTCGTGATATTCCTTGTACGTTTGGCAGCTCTGGCAGTAGCAGTTGCTACTTGGGAGGCAGCTCATAG
Protein sequence

>Msa0340610

MEYPFYSKGGGIGYWQSPGTQFEGPTSLDGGINNLVSEDMPNSFSELMNFDTYAGLCSGPSMTDQIMTNELPSLASVLYQSPDGFNPVEQNSGQFYMTGGVGGNYNNLESSPIFGEKIVSQQMDTLLGFLDNSNDANNLSSRQKFDDPSQHVNAFDMGNYVIARPQALISRPPALSLDERMLKALSFFKESAGGGILAQVWVPIKHDGQVLLSTSEQPYLLDQMLAGYREVSRTFRFSTEGKPGCIPGLPGRVFISKVPEWTSNVGYYNPKEYLRAEHARNHEVRGSIAFPIFDLHSGLPCSAVLELVTTKEKLDFDRELEIICRSLQLVNLRTTVSSRLLPECLSTNKRAALTEIVDVLRSVCHAHRLPLALTWIPCFYTDGTRDVTTRIQIKEGNSSSREKNILCIEESACYITDKVMEGFVRACIEHPLEEGKGVAGKALQSNHPFFYSDVKTYDISEYPLVHHARKFNLGAAVAIRLRSIYTNNDDYILEFFLPINMKGSQEQQLLLDNLSGTMQKICKSLRTVSGAEISGTESSVAGFGKKNVPSFPPTSTRNSQISLINEKDGSVQKLSLDASNLRNNGNEPSCNQENNGSRRRVEKKRNTSEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRHHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPSSGAFVAGGTTIQEINENRSLLFPERSTTQDSEPISQDAVSVPSEGENSENKLEGKLKETNTCSINCSEDSKSFGMDDCPEQACNGSVLAKCDEWILNNGGLREEKRKHSTIGQRTSSFAVDEMDTGADGDDDVVEHNHPTSSSLTDSSNGSGSMIHGSSSDYQNFKNQKPSKGKSTIVDSGSKIVVKATYGEDTIRFKFDPSTGYYKLYEEVAARFKLQDGSFQLKYLDDEEEWVMLVNDSDLQVCLEILNDMGTHNARFLVRDIPCTFGSSGSSSCYLGGSS*