Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340750 | XP_013463097.2 | 88.395 | 517 | 32 | 4 | 1 | 491 | 325 | 839 | 0.0 | 917 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340750 | sp|Q8RWB8|UPL6_ARATH | 50.591 | 423 | 170 | 8 | 1 | 393 | 288 | 701 | 1.77e-120 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0260730 | Msa0340750 | 0.940130 | 3.942124e-100 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340750 | MtrunA17_Chr2g0293881 | 88.395 | 517 | 32 | 4 | 1 | 491 | 325 | 839 | 0.0 | 917 |
| Msa0340750 | MtrunA17_Chr2g0293841 | 77.833 | 406 | 58 | 3 | 1 | 380 | 284 | 683 | 0.0 | 621 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0340750 | AT3G17205.1 | 50.591 | 423 | 170 | 8 | 1 | 393 | 288 | 701 | 1.80e-121 | 380 |
| Msa0340750 | AT3G17205.3 | 50.591 | 423 | 170 | 8 | 1 | 393 | 288 | 701 | 1.80e-121 | 380 |
| Msa0340750 | AT3G17205.2 | 48.456 | 421 | 168 | 6 | 1 | 393 | 288 | 687 | 6.99e-117 | 367 |
Find 132 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGGCTATTTGAGTTTA+TGG | 0.130876 | 2_4:-62151671 | None:intergenic |
| CCTACCTATGCCTGTCTTCT+TGG | 0.177928 | 2_4:+62147043 | Msa0340750:CDS |
| CTTGGAAATATATTAGAAAT+TGG | 0.205553 | 2_4:+62147061 | Msa0340750:CDS |
| CAAGAATGTTTGACCGGTTT+TGG | 0.218101 | 2_4:-62151564 | None:intergenic |
| GGCAAGGTATGATCATATTT+TGG | 0.237666 | 2_4:+62151339 | Msa0340750:CDS |
| AAGCCAATTCTTACCTTTGC+AGG | 0.275655 | 2_4:-62150855 | None:intergenic |
| TTACCTTTGCAGGTGGTATC+AGG | 0.298160 | 2_4:-62150845 | None:intergenic |
| AGTAGCTCTGGATAGGAAAT+TGG | 0.312730 | 2_4:+62148423 | Msa0340750:CDS |
| TTTGTACTGCTTGTCCTAAC+TGG | 0.334967 | 2_4:-62149984 | None:intergenic |
| ACCTGACTGTTCATTCGATA+TGG | 0.341026 | 2_4:+62147102 | Msa0340750:CDS |
| CATGCATCGGTGGCGGTGGC+GGG | 0.345353 | 2_4:-62151489 | None:intergenic |
| TCCTCATATGTTTCAACATT+CGG | 0.346747 | 2_4:-62151592 | None:intergenic |
| GGTAGAAAACTGATCAGATT+TGG | 0.347970 | 2_4:-62146998 | None:intergenic |
| CAGCTATTGGTGCAGTTTGT+GGG | 0.354744 | 2_4:+62148723 | Msa0340750:CDS |
| TGCCAATGGGCTGGATGATA+TGG | 0.355534 | 2_4:+62148694 | Msa0340750:CDS |
| ACATGCATCGGTGGCGGTGG+CGG | 0.371688 | 2_4:-62151490 | None:intergenic |
| CTGACCTTGTTCCTATACTT+TGG | 0.376008 | 2_4:+62148810 | Msa0340750:CDS |
| CAGTTAGATCTATTCCAGTT+AGG | 0.385711 | 2_4:+62149970 | Msa0340750:CDS |
| TATGCTAACCCTTTGTTGAA+TGG | 0.386583 | 2_4:-62150021 | None:intergenic |
| TGCTCATATCCTTCAGTGAT+AGG | 0.386984 | 2_4:-62149562 | None:intergenic |
| GGATCTCAGACTGTATTTAC+TGG | 0.387572 | 2_4:+62151304 | Msa0340750:CDS |
| AACAAGGCGTGATCATATTT+CGG | 0.396503 | 2_4:+62151114 | Msa0340750:CDS |
| TGAAGAGAACTCTCCAATCT+TGG | 0.405172 | 2_4:+62151444 | Msa0340750:CDS |
| ATTTACTGGAAATCGGTTCA+TGG | 0.407526 | 2_4:+62151318 | Msa0340750:CDS |
| AGCCTCAACAAGCTGCATTT+AGG | 0.417719 | 2_4:+62151011 | Msa0340750:intron |
| CCAGCGATTTCCATGCTGAC+GGG | 0.421358 | 2_4:+62150659 | Msa0340750:CDS |
| TACTCGCTTCCTTCTGCAAC+TGG | 0.424069 | 2_4:+62148471 | Msa0340750:CDS |
| GCAGCTATTGGTGCAGTTTG+TGG | 0.424379 | 2_4:+62148722 | Msa0340750:CDS |
| AGACTGTATTTACTGGAAAT+CGG | 0.426807 | 2_4:+62151311 | Msa0340750:CDS |
| CTCCTGGTGAACACCAAAAC+CGG | 0.429834 | 2_4:+62151551 | Msa0340750:CDS |
| AGTAACAGCTGCAAGGTCTA+TGG | 0.435642 | 2_4:-62147933 | None:intergenic |
| AGCAAATAAAATTGTAAAGA+AGG | 0.436224 | 2_4:+62150815 | Msa0340750:CDS |
| CCAGGAGAAGTTTCATGTTG+TGG | 0.438294 | 2_4:-62151535 | None:intergenic |
| TTCATAAATTTCCAAAGTAT+AGG | 0.438305 | 2_4:-62148821 | None:intergenic |
| GCTCATATCCTTCAGTGATA+GGG | 0.440723 | 2_4:-62149561 | None:intergenic |
| TACTTTGGAAATTTATGAAA+CGG | 0.445587 | 2_4:+62148825 | Msa0340750:CDS |
| CCATTTGATGAATGTGATGT+TGG | 0.447579 | 2_4:-62146964 | None:intergenic |
| CAGGAGAAGTTTCATGTTGT+GGG | 0.450371 | 2_4:-62151534 | None:intergenic |
| CTGTTGAACAGTCCATTGTA+AGG | 0.459003 | 2_4:+62151368 | Msa0340750:CDS |
| CCAACATCACATTCATCAAA+TGG | 0.463047 | 2_4:+62146964 | Msa0340750:CDS |
| ACATATGAGGATGCCTGAAA+TGG | 0.468185 | 2_4:+62151604 | Msa0340750:exon |
| TTGCAGGTGGTATCAGGAAA+GGG | 0.476065 | 2_4:-62150839 | None:intergenic |
| TATTTCAGCTGCCAATGGGC+TGG | 0.481130 | 2_4:+62148685 | Msa0340750:CDS |
| TGTAACACAGGTTCCAAGAT+TGG | 0.483486 | 2_4:-62151457 | None:intergenic |
| TATTGAAGCCATTCAACAAA+GGG | 0.484398 | 2_4:+62150013 | Msa0340750:CDS |
| TAATATATTTCCAAGAAGAC+AGG | 0.485040 | 2_4:-62147053 | None:intergenic |
| ACAAAAGAAAAGCAAAATCA+AGG | 0.486189 | 2_4:-62151762 | None:intergenic |
| TGAAGTCATGGAAGTAGCTC+TGG | 0.486284 | 2_4:+62148411 | Msa0340750:CDS |
| ATGCATCGGTGGCGGTGGCG+GGG | 0.487315 | 2_4:-62151488 | None:intergenic |
| AATTCATCTGATATATCCTT+AGG | 0.489791 | 2_4:-62147019 | None:intergenic |
| GAGATATTTCAGCTGCCAAT+GGG | 0.491118 | 2_4:+62148681 | Msa0340750:CDS |
| GATATGGAGGTTGCAGCTAT+TGG | 0.497351 | 2_4:+62148710 | Msa0340750:CDS |
| ACTATCCGATCTTGTTAAAG+AGG | 0.497400 | 2_4:-62147978 | None:intergenic |
| CCCGTCAGCATGGAAATCGC+TGG | 0.497816 | 2_4:-62150659 | None:intergenic |
| GGAAGATGCTTATAATTCAA+AGG | 0.500185 | 2_4:+62151135 | Msa0340750:CDS |
| CCGTCAGCATGGAAATCGCT+GGG | 0.504146 | 2_4:-62150658 | None:intergenic |
| ATTAACCACAGCTGTCTCCT+TGG | 0.510556 | 2_4:-62151687 | None:intergenic |
| AAGGAAAAGAAACATTCCTA+AGG | 0.513013 | 2_4:-62151743 | None:intergenic |
| TGCCTAAATGCAGCTTGTTG+AGG | 0.513148 | 2_4:-62151013 | None:intergenic |
| TCTAACTGAATTAGCAAATG+AGG | 0.514566 | 2_4:-62149955 | None:intergenic |
| TCTTCCCTTAGCTCCACGAT+TGG | 0.514808 | 2_4:+62150611 | Msa0340750:intron |
| AGAGATATTTCAGCTGCCAA+TGG | 0.516832 | 2_4:+62148680 | Msa0340750:CDS |
| TCATGATGCTGAACCATCAC+GGG | 0.519349 | 2_4:-62151424 | None:intergenic |
| CATCGGTGGCGGTGGCGGGG+AGG | 0.525743 | 2_4:-62151485 | None:intergenic |
| CTCACTCTGTAGCTGCAGTT+AGG | 0.528654 | 2_4:+62151047 | Msa0340750:CDS |
| CCCAGCGATTTCCATGCTGA+CGG | 0.530070 | 2_4:+62150658 | Msa0340750:CDS |
| CTGGAAATCGGTTCATGGCA+AGG | 0.530924 | 2_4:+62151323 | Msa0340750:CDS |
| CCTCATCATTCTATTGAAGC+AGG | 0.534186 | 2_4:+62149586 | Msa0340750:CDS |
| TCCACTCTTCTACCTGGGAC+AGG | 0.535232 | 2_4:-62150058 | None:intergenic |
| CTCATATCCTTCAGTGATAG+GGG | 0.537378 | 2_4:-62149560 | None:intergenic |
| CTCCATATCATCCAGCCCAT+TGG | 0.537577 | 2_4:-62148696 | None:intergenic |
| GGAAATATATTAGAAATTGG+TGG | 0.539622 | 2_4:+62147064 | Msa0340750:CDS |
| GGGGAGGTATGCTGTAACAC+AGG | 0.541058 | 2_4:-62151469 | None:intergenic |
| GTTCATCAAGAATGTTTGAC+CGG | 0.541717 | 2_4:-62151570 | None:intergenic |
| GGTCAGGCATATGCTTATGA+TGG | 0.544539 | 2_4:+62149505 | Msa0340750:intron |
| TCATGGAAGTAGCTCTGGAT+AGG | 0.545515 | 2_4:+62148416 | Msa0340750:CDS |
| CTATCCGATCTTGTTAAAGA+GGG | 0.546821 | 2_4:-62147977 | None:intergenic |
| ATAACATGCATCGGTGGCGG+TGG | 0.547008 | 2_4:-62151493 | None:intergenic |
| AGGAACAAGGTCAGTTCTGT+AGG | 0.547778 | 2_4:-62148801 | None:intergenic |
| TTCATGTACTTGCCTTACAA+TGG | 0.548828 | 2_4:-62151380 | None:intergenic |
| CGTCTCTGAACTCCTGTCCC+AGG | 0.555025 | 2_4:+62150046 | Msa0340750:CDS |
| CCACAACATGAAACTTCTCC+TGG | 0.556542 | 2_4:+62151535 | Msa0340750:CDS |
| ACCGAATGTTGAAACATATG+AGG | 0.557959 | 2_4:+62151591 | Msa0340750:CDS |
| AGGCATATGCTTATGATGGT+TGG | 0.563283 | 2_4:+62149509 | Msa0340750:intron |
| ACCATATCGAATGAACAGTC+AGG | 0.564118 | 2_4:-62147103 | None:intergenic |
| TTCATAACATGCATCGGTGG+CGG | 0.564718 | 2_4:-62151496 | None:intergenic |
| TTCATGATGCTGAACCATCA+CGG | 0.565941 | 2_4:-62151425 | None:intergenic |
| TTAGAAAGCAGTTCAGAACA+AGG | 0.566415 | 2_4:+62151098 | Msa0340750:CDS |
| TTAGGCAAACACATGGATCT+CGG | 0.568800 | 2_4:+62151065 | Msa0340750:CDS |
| GTCGTCTGTTGTTCCAATCG+TGG | 0.572553 | 2_4:-62150624 | None:intergenic |
| TTCAGATTCTATGATTGCTG+AGG | 0.572860 | 2_4:+62148369 | Msa0340750:intron |
| TTTGCAGGTGGTATCAGGAA+AGG | 0.573077 | 2_4:-62150840 | None:intergenic |
| ATTTCCAAGAAGACAGGCAT+AGG | 0.573882 | 2_4:-62147047 | None:intergenic |
| ACACCCCTCTTTAACAAGAT+CGG | 0.574783 | 2_4:+62147973 | Msa0340750:CDS |
| GCTGTGGTTAATCCTCCTCA+AGG | 0.580937 | 2_4:+62151698 | Msa0340750:three_prime_UTR |
| AGTCTCAGCTAGCTGCAGCT+AGG | 0.582532 | 2_4:+62151272 | Msa0340750:intron |
| ATTGATTAACCCCGTCAGCA+TGG | 0.585643 | 2_4:-62150669 | None:intergenic |
| AAATTCCTCTTGTGATGATG+TGG | 0.585738 | 2_4:-62151645 | None:intergenic |
| CCAATTCTTACCTTTGCAGG+TGG | 0.586562 | 2_4:-62150852 | None:intergenic |
| ATGTTTAATCACCCTTGAGG+AGG | 0.592113 | 2_4:-62151710 | None:intergenic |
| CCAAGAAGACAGGCATAGGT+AGG | 0.593630 | 2_4:-62147043 | None:intergenic |
| TCAACATTCATAACATGCAT+CGG | 0.596521 | 2_4:-62151502 | None:intergenic |
| GACTGGCGATGATGAAGTCA+TGG | 0.597530 | 2_4:+62148399 | Msa0340750:CDS |
| CTATTGAAGCCATTCAACAA+AGG | 0.600718 | 2_4:+62150012 | Msa0340750:CDS |
| AGGAAAAGAAACATTCCTAA+GGG | 0.602640 | 2_4:-62151742 | None:intergenic |
| AAGGATTGACACTCCCGTGA+TGG | 0.603506 | 2_4:+62151411 | Msa0340750:CDS |
| CAGCGATTTCCATGCTGACG+GGG | 0.606288 | 2_4:+62150660 | Msa0340750:CDS |
| AATGGTCATCTTTGTCTAAG+CGG | 0.607096 | 2_4:+62148864 | Msa0340750:CDS |
| TCCATAAACTCAAATAGCCA+AGG | 0.607976 | 2_4:+62151670 | Msa0340750:three_prime_UTR |
| ATTGTAAGGCAAGTACATGA+AGG | 0.611738 | 2_4:+62151382 | Msa0340750:CDS |
| GTCAGCATGGAAATCGCTGG+GGG | 0.614656 | 2_4:-62150656 | None:intergenic |
| TTGATGTTTAATCACCCTTG+AGG | 0.615184 | 2_4:-62151713 | None:intergenic |
| GGAGAAACCCCTATCACTGA+AGG | 0.615278 | 2_4:+62149553 | Msa0340750:CDS |
| TTTCCTGATACCACCTGCAA+AGG | 0.616944 | 2_4:+62150842 | Msa0340750:CDS |
| CAAGGCCACATCATCACAAG+AGG | 0.619120 | 2_4:+62151640 | Msa0340750:three_prime_UTR |
| GATGGTATACCAGTTGCAGA+AGG | 0.623506 | 2_4:-62148480 | None:intergenic |
| AAACTGTAGTAACAGCTGCA+AGG | 0.623601 | 2_4:-62147940 | None:intergenic |
| ACAGTCATAATACTTTCAAG+TGG | 0.631956 | 2_4:-62148773 | None:intergenic |
| TGCAGGTGGTATCAGGAAAG+GGG | 0.633371 | 2_4:-62150838 | None:intergenic |
| CAATGGGCTGGATGATATGG+AGG | 0.637882 | 2_4:+62148697 | Msa0340750:CDS |
| ATTGCTGAGGATGATATGAC+TGG | 0.639987 | 2_4:+62148382 | Msa0340750:CDS |
| CCTGCTTCAATAGAATGATG+AGG | 0.646238 | 2_4:-62149586 | None:intergenic |
| CTGTGGTTAATCCTCCTCAA+GGG | 0.649767 | 2_4:+62151699 | Msa0340750:three_prime_UTR |
| AAGTACATGAAGGATCAGAA+AGG | 0.651645 | 2_4:+62151392 | Msa0340750:CDS |
| ATTTCCAAAGTATAGGAACA+AGG | 0.657837 | 2_4:-62148814 | None:intergenic |
| ACATTCATAACATGCATCGG+TGG | 0.662820 | 2_4:-62151499 | None:intergenic |
| TATCCGATCTTGTTAAAGAG+GGG | 0.669572 | 2_4:-62147976 | None:intergenic |
| GCTGCAGCTAGGCAAAGACA+TGG | 0.672227 | 2_4:+62151283 | Msa0340750:CDS |
| AATAGCCAAGGAGACAGCTG+TGG | 0.683164 | 2_4:+62151682 | Msa0340750:three_prime_UTR |
| GCTGCAGTTAGGCAAACACA+TGG | 0.691410 | 2_4:+62151058 | Msa0340750:CDS |
| CGTCAGCATGGAAATCGCTG+GGG | 0.694643 | 2_4:-62150657 | None:intergenic |
| GCTGCATTTAGGCAAACACA+TGG | 0.695976 | 2_4:+62151022 | Msa0340750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAAATATAGAAATTAA+AGG | + | chr2_4:62147278-62147297 | Msa0340750:intron | 10.0% |
| !! | TATTAAAAAGATTATACATA+AGG | - | chr2_4:62147707-62147726 | None:intergenic | 10.0% |
| !!! | TAATTTTTATGAATAAAAGA+AGG | + | chr2_4:62148103-62148122 | Msa0340750:intron | 10.0% |
| !!! | TTAAAATTAATGGTATTTTA+TGG | - | chr2_4:62148162-62148181 | None:intergenic | 10.0% |
| !!! | ACCATTTTTTTTTTTAAAAT+TGG | + | chr2_4:62148548-62148567 | Msa0340750:intron | 10.0% |
| !! | TTAACATTAAATATCTTTAA+GGG | - | chr2_4:62149093-62149112 | None:intergenic | 10.0% |
| !! | TTTAACATTAAATATCTTTA+AGG | - | chr2_4:62149094-62149113 | None:intergenic | 10.0% |
| !!! | AGTTTATTTTTATTAAAACT+GGG | + | chr2_4:62149806-62149825 | Msa0340750:intron | 10.0% |
| !!! | ATAAATTGATAATCTTAATT+TGG | + | chr2_4:62150747-62150766 | Msa0340750:intron | 10.0% |
| !!! | TTGATTTAAAATAAATTGAA+AGG | + | chr2_4:62150905-62150924 | Msa0340750:intron | 10.0% |
| !!! | TATTTTTTTTTTTATTTGCG+AGG | + | chr2_4:62147786-62147805 | Msa0340750:intron | 15.0% |
| !!! | ATTTTTTTTTTTATTTGCGA+GGG | + | chr2_4:62147787-62147806 | Msa0340750:intron | 15.0% |
| !!! | TTTATCAACTATGATAATTT+TGG | - | chr2_4:62148271-62148290 | None:intergenic | 15.0% |
| !!! | GCCAATTTTAAAAAAAAAAA+TGG | - | chr2_4:62148552-62148571 | None:intergenic | 15.0% |
| !!! | AATTTTTTTGCTTATAAACT+GGG | - | chr2_4:62148987-62149006 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTGCTTATAAAC+TGG | - | chr2_4:62148988-62149007 | None:intergenic | 15.0% |
| !! | AATATTAAATAAGAATTGAC+TGG | - | chr2_4:62149031-62149050 | None:intergenic | 15.0% |
| !!! | TTTTTGGAGAAATATTAAAT+AGG | + | chr2_4:62149324-62149343 | Msa0340750:intron | 15.0% |
| !! | TTAGATTTAAAGAAAATTGA+AGG | - | chr2_4:62149435-62149454 | None:intergenic | 15.0% |
| !!! | GAGTTTATTTTTATTAAAAC+TGG | + | chr2_4:62149805-62149824 | Msa0340750:intron | 15.0% |
| !!! | GTTTATTTTTATTAAAACTG+GGG | + | chr2_4:62149807-62149826 | Msa0340750:intron | 15.0% |
| !!! | TTTATTTTTATTAAAACTGG+GGG | + | chr2_4:62149808-62149827 | Msa0340750:intron | 15.0% |
| !! | GTAAGCAATATTATATTTAT+GGG | - | chr2_4:62149839-62149858 | None:intergenic | 15.0% |
| !! | TGTAAGCAATATTATATTTA+TGG | - | chr2_4:62149840-62149859 | None:intergenic | 15.0% |
| !! | AAAAAAAATGTAGTAGATAT+GGG | - | chr2_4:62150298-62150317 | None:intergenic | 15.0% |
| !! | TAAAAAAAATGTAGTAGATA+TGG | - | chr2_4:62150299-62150318 | None:intergenic | 15.0% |
| !! | GAAAAAAAAGAAAACAATAA+GGG | - | chr2_4:62150331-62150350 | None:intergenic | 15.0% |
| !!! | ATTTAATAAGAGATATTTTG+AGG | + | chr2_4:62150431-62150450 | Msa0340750:intron | 15.0% |
| !! | ATAAACAATTTATATGCATA+TGG | - | chr2_4:62150559-62150578 | None:intergenic | 15.0% |
| !! | AGAAAATAAAAAAGTAAGTT+AGG | - | chr2_4:62150594-62150613 | None:intergenic | 15.0% |
| !! | CTTGGAAATATATTAGAAAT+TGG | + | chr2_4:62147061-62147080 | Msa0340750:CDS | 20.0% |
| !!! | CATAGAGTATTGATAAAAAA+TGG | - | chr2_4:62147152-62147171 | None:intergenic | 20.0% |
| !! | ACTTAATAAGTGTGTTAATT+CGG | - | chr2_4:62147598-62147617 | None:intergenic | 20.0% |
| !! | AAATAACTTTCAATGTCATA+CGG | - | chr2_4:62147771-62147790 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTATTTGCGAG+GGG | + | chr2_4:62147788-62147807 | Msa0340750:intron | 20.0% |
| !!! | TCAACTTTAAAATATACACA+CGG | - | chr2_4:62147891-62147910 | None:intergenic | 20.0% |
| !!! | ATTTGCATTTATTTCTATTC+AGG | + | chr2_4:62147910-62147929 | Msa0340750:intron | 20.0% |
| !!! | ATACCATTAATTTTAATCCT+TGG | + | chr2_4:62148166-62148185 | Msa0340750:intron | 20.0% |
| !! | AATCCAAGGATTAAAATTAA+TGG | - | chr2_4:62148172-62148191 | None:intergenic | 20.0% |
| !! | TTCATAAATTTCCAAAGTAT+AGG | - | chr2_4:62148824-62148843 | None:intergenic | 20.0% |
| !!! | TACTTTGGAAATTTATGAAA+CGG | + | chr2_4:62148825-62148844 | Msa0340750:CDS | 20.0% |
| !! | TAAAATTTCTTACTTGTAGA+CGG | - | chr2_4:62148948-62148967 | None:intergenic | 20.0% |
| !! | TTGATGAATAATTAATGTAG+AGG | + | chr2_4:62149190-62149209 | Msa0340750:intron | 20.0% |
| !!! | TAGTGTGAAATAATTTTGTT+TGG | - | chr2_4:62149216-62149235 | None:intergenic | 20.0% |
| !! | AAACAAAATTATTTCACACT+AGG | + | chr2_4:62149215-62149234 | Msa0340750:intron | 20.0% |
| !! | AATATTAAATAGGTCAAAAG+TGG | + | chr2_4:62149334-62149353 | Msa0340750:intron | 20.0% |
| !! | ATATTAAATAGGTCAAAAGT+GGG | + | chr2_4:62149335-62149354 | Msa0340750:intron | 20.0% |
| !! | TAATTAATTGTTCACTGAAA+TGG | + | chr2_4:62149692-62149711 | Msa0340750:intron | 20.0% |
| !! | AATTAATTGTTCACTGAAAT+GGG | + | chr2_4:62149693-62149712 | Msa0340750:intron | 20.0% |
| !! | CATTTATATGAAGCAATATA+AGG | - | chr2_4:62149865-62149884 | None:intergenic | 20.0% |
| !!! | CATATTTTGTCTATCTTTAA+AGG | + | chr2_4:62150153-62150172 | Msa0340750:intron | 20.0% |
| !! | AAAAAAATGTAGTAGATATG+GGG | - | chr2_4:62150297-62150316 | None:intergenic | 20.0% |
| !! | CGAAAAAAAAGAAAACAATA+AGG | - | chr2_4:62150332-62150351 | None:intergenic | 20.0% |
| !! | AATTTATATGCATATGGTTA+TGG | - | chr2_4:62150553-62150572 | None:intergenic | 20.0% |
| !!! | TAATCAATTTTTCATATCTC+AGG | + | chr2_4:62150684-62150703 | Msa0340750:CDS | 20.0% |
| !!! | TTATATAATCTTTTCTCTAC+AGG | + | chr2_4:62150773-62150792 | Msa0340750:intron | 20.0% |
| !! | AGCAAATAAAATTGTAAAGA+AGG | + | chr2_4:62150815-62150834 | Msa0340750:CDS | 20.0% |
| ! | AATTCATCTGATATATCCTT+AGG | - | chr2_4:62147022-62147041 | None:intergenic | 25.0% |
| ! | TAATATATTTCCAAGAAGAC+AGG | - | chr2_4:62147056-62147075 | None:intergenic | 25.0% |
| ! | GGAAATATATTAGAAATTGG+TGG | + | chr2_4:62147064-62147083 | Msa0340750:CDS | 25.0% |
| ! | AATCCAAGATAAGTCATAAA+GGG | - | chr2_4:62147196-62147215 | None:intergenic | 25.0% |
| ! | TAATCCAAGATAAGTCATAA+AGG | - | chr2_4:62147197-62147216 | None:intergenic | 25.0% |
| !!! | ATCCCTAAATTCTAGTTTTA+CGG | + | chr2_4:62147509-62147528 | Msa0340750:intron | 25.0% |
| ! | TGTTGAGAATACAAATAAGT+TGG | + | chr2_4:62147542-62147561 | Msa0340750:intron | 25.0% |
| !!! | TTTTTTTTTTATTTGCGAGG+GGG | + | chr2_4:62147789-62147808 | Msa0340750:intron | 25.0% |
| !! | TGTTTTCTAATCACATAGTT+TGG | + | chr2_4:62148011-62148030 | Msa0340750:intron | 25.0% |
| ! | TGTAAGAAGTTAGAAAGAAA+GGG | - | chr2_4:62148053-62148072 | None:intergenic | 25.0% |
| ! | ATGTAAGAAGTTAGAAAGAA+AGG | - | chr2_4:62148054-62148073 | None:intergenic | 25.0% |
| ! | TTATGAATAAAAGAAGGCTA+AGG | + | chr2_4:62148109-62148128 | Msa0340750:intron | 25.0% |
| ! | AATGAGAACAAATAAATCCA+AGG | - | chr2_4:62148186-62148205 | None:intergenic | 25.0% |
| !! | ATGGTAAAGCAAAATTTTGA+TGG | - | chr2_4:62148533-62148552 | None:intergenic | 25.0% |
| !!! | ATGACCATTTTTTATTCTCT+TGG | - | chr2_4:62148853-62148872 | None:intergenic | 25.0% |
| ! | AAAATTTCTTACTTGTAGAC+GGG | - | chr2_4:62148947-62148966 | None:intergenic | 25.0% |
| !! | AATATCTTTAAGGGTAGTTT+CGG | - | chr2_4:62149084-62149103 | None:intergenic | 25.0% |
| !! | AACTTTTCTTTAATACTGCA+AGG | + | chr2_4:62149121-62149140 | Msa0340750:intron | 25.0% |
| !! | ACTTTTCTTTAATACTGCAA+GGG | + | chr2_4:62149122-62149141 | Msa0340750:intron | 25.0% |
| !! | AGTATATTCTAATCCTTTTC+TGG | + | chr2_4:62149484-62149503 | Msa0340750:intron | 25.0% |
| !! | TAATGAGAAATTTTATGAGC+AGG | + | chr2_4:62149532-62149551 | Msa0340750:CDS | 25.0% |
| !! | TTTTATATTTCCTCTCCATT+GGG | + | chr2_4:62150107-62150126 | Msa0340750:intron | 25.0% |
| !!! | TCTTGGTCTTTTCTTATTTA+TGG | + | chr2_4:62150196-62150215 | Msa0340750:intron | 25.0% |
| ! | GTAAAATGCCATAAATAAGA+GGG | - | chr2_4:62150261-62150280 | None:intergenic | 25.0% |
| ! | TATTGGATGTAAATGCATAT+GGG | - | chr2_4:62150523-62150542 | None:intergenic | 25.0% |
| ! | TTATTGGATGTAAATGCATA+TGG | - | chr2_4:62150524-62150543 | None:intergenic | 25.0% |
| !! | TTATGATTTTTGTCCATTTC+AGG | - | chr2_4:62151620-62151639 | None:intergenic | 25.0% |
| ! | AATGGACAAAAATCATAACA+AGG | + | chr2_4:62151622-62151641 | Msa0340750:three_prime_UTR | 25.0% |
| ! | ACAAAAGAAAAGCAAAATCA+AGG | - | chr2_4:62151765-62151784 | None:intergenic | 25.0% |
| GATAAAAAATGGCACAATGT+AGG | - | chr2_4:62147141-62147160 | None:intergenic | 30.0% | |
| CTTATCTTGGATTACGTTAA+AGG | + | chr2_4:62147203-62147222 | Msa0340750:intron | 30.0% | |
| TAAAGGATGATTTCTTGCTT+AGG | + | chr2_4:62147295-62147314 | Msa0340750:intron | 30.0% | |
| ! | AACAGGTTGAAACAGATTTA+TGG | + | chr2_4:62147333-62147352 | Msa0340750:intron | 30.0% |
| ! | ACAGGTTGAAACAGATTTAT+GGG | + | chr2_4:62147334-62147353 | Msa0340750:intron | 30.0% |
| !! | GGCATTTTAAAGAGTTTATC+TGG | + | chr2_4:62147356-62147375 | Msa0340750:intron | 30.0% |
| GTAAAACTAGAATTTAGGGA+TGG | - | chr2_4:62147510-62147529 | None:intergenic | 30.0% | |
| CACCGTAAAACTAGAATTTA+GGG | - | chr2_4:62147514-62147533 | None:intergenic | 30.0% | |
| TCACCGTAAAACTAGAATTT+AGG | - | chr2_4:62147515-62147534 | None:intergenic | 30.0% | |
| ! | TCTGCATACTAAACAAGTTT+TGG | + | chr2_4:62147668-62147687 | Msa0340750:intron | 30.0% |
| CAAATATGAACCACCATTAT+AGG | + | chr2_4:62148132-62148151 | Msa0340750:intron | 30.0% | |
| ! | ATTTTATGGACCACCTATAA+TGG | - | chr2_4:62148148-62148167 | None:intergenic | 30.0% |
| !!! | TGTACCATTTGTTTTTAAGC+TGG | + | chr2_4:62148335-62148354 | Msa0340750:intron | 30.0% |
| TACAAAAGTCATTTGCATGA+TGG | - | chr2_4:62148501-62148520 | None:intergenic | 30.0% | |
| ACAGTCATAATACTTTCAAG+TGG | - | chr2_4:62148776-62148795 | None:intergenic | 30.0% | |
| ATTTCCAAAGTATAGGAACA+AGG | - | chr2_4:62148817-62148836 | None:intergenic | 30.0% | |
| ! | TTTTTGCTTATAAACTGGGA+GGG | - | chr2_4:62148983-62149002 | None:intergenic | 30.0% |
| !!! | TTTTTTGCTTATAAACTGGG+AGG | - | chr2_4:62148984-62149003 | None:intergenic | 30.0% |
| ATCATTATTAGCACTATCCT+TGG | - | chr2_4:62149155-62149174 | None:intergenic | 30.0% | |
| CTAATAATGATCACATGCAT+CGG | + | chr2_4:62149164-62149183 | Msa0340750:intron | 30.0% | |
| ! | TTTGGAACTGCATAAACATA+TGG | + | chr2_4:62149244-62149263 | Msa0340750:intron | 30.0% |
| TAAACATATGGATGATACAC+TGG | + | chr2_4:62149256-62149275 | Msa0340750:intron | 30.0% | |
| TATCTCCAATAAGTAGCATA+AGG | + | chr2_4:62149298-62149317 | Msa0340750:intron | 30.0% | |
| ATCTCCAATAAGTAGCATAA+GGG | + | chr2_4:62149299-62149318 | Msa0340750:intron | 30.0% | |
| ! | AATACCCTTATGCTACTTAT+TGG | - | chr2_4:62149306-62149325 | None:intergenic | 30.0% |
| !!! | AAGTAGCATAAGGGTATTTT+TGG | + | chr2_4:62149308-62149327 | Msa0340750:intron | 30.0% |
| ! | GTCTCTTTTGCTGATAATTT+GGG | + | chr2_4:62149357-62149376 | Msa0340750:intron | 30.0% |
| AAAGAAAATTGAAGGACCAT+GGG | - | chr2_4:62149427-62149446 | None:intergenic | 30.0% | |
| TAAAGAAAATTGAAGGACCA+TGG | - | chr2_4:62149428-62149447 | None:intergenic | 30.0% | |
| CTTAAAGTGAAAGGAAGAAA+AGG | - | chr2_4:62149720-62149739 | None:intergenic | 30.0% | |
| ! | CTTTTCTTCCTTTCACTTTA+AGG | + | chr2_4:62149718-62149737 | Msa0340750:intron | 30.0% |
| AAGATTTGACACAACTTATC+TGG | - | chr2_4:62149749-62149768 | None:intergenic | 30.0% | |
| AAATAAACTCTCCAGTTCTT+TGG | - | chr2_4:62149795-62149814 | None:intergenic | 30.0% | |
| TCTAACTGAATTAGCAAATG+AGG | - | chr2_4:62149958-62149977 | None:intergenic | 30.0% | |
| TATTGAAGCCATTCAACAAA+GGG | + | chr2_4:62150013-62150032 | Msa0340750:CDS | 30.0% | |
| ! | GTTTTATATTTCCTCTCCAT+TGG | + | chr2_4:62150106-62150125 | Msa0340750:intron | 30.0% |
| !! | TATCTTTAAAGGCATCTCTT+GGG | + | chr2_4:62150164-62150183 | Msa0340750:intron | 30.0% |
| GGTAAAATGCCATAAATAAG+AGG | - | chr2_4:62150262-62150281 | None:intergenic | 30.0% | |
| AAGAGTAAAATCGCAATTAC+AGG | - | chr2_4:62150384-62150403 | None:intergenic | 30.0% | |
| ATGGTTATGGTTATGGTTAT+TGG | - | chr2_4:62150540-62150559 | None:intergenic | 30.0% | |
| TATGCATATGGTTATGGTTA+TGG | - | chr2_4:62150547-62150566 | None:intergenic | 30.0% | |
| TTCACCTAATAACGATAGTA+GGG | - | chr2_4:62150720-62150739 | None:intergenic | 30.0% | |
| TTTCACCTAATAACGATAGT+AGG | - | chr2_4:62150721-62150740 | None:intergenic | 30.0% | |
| ! | TCTGAACTGCTTTCTAAAAA+TGG | - | chr2_4:62151095-62151114 | None:intergenic | 30.0% |
| GGAAGATGCTTATAATTCAA+AGG | + | chr2_4:62151135-62151154 | Msa0340750:CDS | 30.0% | |
| AGACTGTATTTACTGGAAAT+CGG | + | chr2_4:62151311-62151330 | Msa0340750:CDS | 30.0% | |
| TCAACATTCATAACATGCAT+CGG | - | chr2_4:62151505-62151524 | None:intergenic | 30.0% | |
| TCCTCATATGTTTCAACATT+CGG | - | chr2_4:62151595-62151614 | None:intergenic | 30.0% | |
| ! | AAACATCAACATTTTCCCTT+AGG | + | chr2_4:62151727-62151746 | Msa0340750:three_prime_UTR | 30.0% |
| AGGAAAAGAAACATTCCTAA+GGG | - | chr2_4:62151745-62151764 | None:intergenic | 30.0% | |
| AAGGAAAAGAAACATTCCTA+AGG | - | chr2_4:62151746-62151765 | None:intergenic | 30.0% | |
| ! | TTTTCTTTTGTGCTTGAGTT+TGG | + | chr2_4:62151774-62151793 | Msa0340750:three_prime_UTR | 30.0% |
| CCATTTGATGAATGTGATGT+TGG | - | chr2_4:62146967-62146986 | None:intergenic | 35.0% | |
| CCAACATCACATTCATCAAA+TGG | + | chr2_4:62146964-62146983 | Msa0340750:CDS | 35.0% | |
| GGTAGAAAACTGATCAGATT+TGG | - | chr2_4:62147001-62147020 | None:intergenic | 35.0% | |
| ! | TCTGATCAGTTTTCTACCTA+AGG | + | chr2_4:62147003-62147022 | Msa0340750:CDS | 35.0% |
| TCTCCCTTTATGACTTATCT+TGG | + | chr2_4:62147190-62147209 | Msa0340750:intron | 35.0% | |
| GATGATTTCTTGCTTAGGAA+AGG | + | chr2_4:62147300-62147319 | Msa0340750:intron | 35.0% | |
| ! | CAGGTTGAAACAGATTTATG+GGG | + | chr2_4:62147335-62147354 | Msa0340750:intron | 35.0% |
| TGTTTATCTAAGCACTCCTT+TGG | + | chr2_4:62147618-62147637 | Msa0340750:intron | 35.0% | |
| ! | AGCTGTTACTACAGTTTTAC+TGG | + | chr2_4:62147946-62147965 | Msa0340750:CDS | 35.0% |
| ! | TGTTACTACAGTTTTACTGG+AGG | + | chr2_4:62147949-62147968 | Msa0340750:CDS | 35.0% |
| TATCCGATCTTGTTAAAGAG+GGG | - | chr2_4:62147979-62147998 | None:intergenic | 35.0% | |
| CTATCCGATCTTGTTAAAGA+GGG | - | chr2_4:62147980-62147999 | None:intergenic | 35.0% | |
| ACTATCCGATCTTGTTAAAG+AGG | - | chr2_4:62147981-62148000 | None:intergenic | 35.0% | |
| ATATGAACCACCATTATAGG+TGG | + | chr2_4:62148135-62148154 | Msa0340750:intron | 35.0% | |
| !! | CTATAGTTAATTTGCGTGCA+AGG | - | chr2_4:62148219-62148238 | None:intergenic | 35.0% |
| CTGACCAGCTTAAAAACAAA+TGG | - | chr2_4:62148342-62148361 | None:intergenic | 35.0% | |
| TTCAGATTCTATGATTGCTG+AGG | + | chr2_4:62148369-62148388 | Msa0340750:intron | 35.0% | |
| GGTGCCAAGAGAATAAAAAA+TGG | + | chr2_4:62148846-62148865 | Msa0340750:CDS | 35.0% | |
| AATGGTCATCTTTGTCTAAG+CGG | + | chr2_4:62148864-62148883 | Msa0340750:CDS | 35.0% | |
| ! | TTTCACACTAGGCATGTTTT+TGG | + | chr2_4:62149226-62149245 | Msa0340750:intron | 35.0% |
| ACTGGAAATGCATAAACATG+TGG | + | chr2_4:62149274-62149293 | Msa0340750:intron | 35.0% | |
| CTGGAAATGCATAAACATGT+GGG | + | chr2_4:62149275-62149294 | Msa0340750:intron | 35.0% | |
| ! | GGTCTCTTTTGCTGATAATT+TGG | + | chr2_4:62149356-62149375 | Msa0340750:intron | 35.0% |
| ! | CTTTTGCTGATAATTTGGGA+CGG | + | chr2_4:62149361-62149380 | Msa0340750:intron | 35.0% |
| !! | ATTCTAATCCTTTTCTGGTC+AGG | + | chr2_4:62149489-62149508 | Msa0340750:intron | 35.0% |
| !! | GTTCTGAGATTGAAATCGTT+AGG | + | chr2_4:62149657-62149676 | Msa0340750:intron | 35.0% |
| TGGATCTTCCTTAAAGTGAA+AGG | - | chr2_4:62149729-62149748 | None:intergenic | 35.0% | |
| CAGTTAGATCTATTCCAGTT+AGG | + | chr2_4:62149970-62149989 | Msa0340750:CDS | 35.0% | |
| CTATTGAAGCCATTCAACAA+AGG | + | chr2_4:62150012-62150031 | Msa0340750:CDS | 35.0% | |
| TATGCTAACCCTTTGTTGAA+TGG | - | chr2_4:62150024-62150043 | None:intergenic | 35.0% | |
| !! | CTATCTTTAAAGGCATCTCT+TGG | + | chr2_4:62150163-62150182 | Msa0340750:intron | 35.0% |
| !! | ATCTTTAAAGGCATCTCTTG+GGG | + | chr2_4:62150165-62150184 | Msa0340750:intron | 35.0% |
| CAGTGCAATGCCATAATTAT+CGG | + | chr2_4:62150225-62150244 | Msa0340750:intron | 35.0% | |
| GTAAAATCGCAATTACAGGA+AGG | - | chr2_4:62150380-62150399 | None:intergenic | 35.0% | |
| TTAGAAAGCAGTTCAGAACA+AGG | + | chr2_4:62151098-62151117 | Msa0340750:CDS | 35.0% | |
| AACAAGGCGTGATCATATTT+CGG | + | chr2_4:62151114-62151133 | Msa0340750:CDS | 35.0% | |
| ! | ATTTACTGGAAATCGGTTCA+TGG | + | chr2_4:62151318-62151337 | Msa0340750:CDS | 35.0% |
| ! | GGCAAGGTATGATCATATTT+TGG | + | chr2_4:62151339-62151358 | Msa0340750:CDS | 35.0% |
| TTCATGTACTTGCCTTACAA+TGG | - | chr2_4:62151383-62151402 | None:intergenic | 35.0% | |
| ATTGTAAGGCAAGTACATGA+AGG | + | chr2_4:62151382-62151401 | Msa0340750:CDS | 35.0% | |
| AAGTACATGAAGGATCAGAA+AGG | + | chr2_4:62151392-62151411 | Msa0340750:CDS | 35.0% | |
| GTTCATCAAGAATGTTTGAC+CGG | - | chr2_4:62151573-62151592 | None:intergenic | 35.0% | |
| ACCGAATGTTGAAACATATG+AGG | + | chr2_4:62151591-62151610 | Msa0340750:CDS | 35.0% | |
| ! | AAATTCCTCTTGTGATGATG+TGG | - | chr2_4:62151648-62151667 | None:intergenic | 35.0% |
| TCCATAAACTCAAATAGCCA+AGG | + | chr2_4:62151670-62151689 | Msa0340750:three_prime_UTR | 35.0% | |
| ! | TCCTTGGCTATTTGAGTTTA+TGG | - | chr2_4:62151674-62151693 | None:intergenic | 35.0% |
| TTGATGTTTAATCACCCTTG+AGG | - | chr2_4:62151716-62151735 | None:intergenic | 35.0% | |
| !!! | TTGAGTTTGGCCTTTTTTGT+GGG | + | chr2_4:62151787-62151806 | Msa0340750:three_prime_UTR | 35.0% |
| ATTTCCAAGAAGACAGGCAT+AGG | - | chr2_4:62147050-62147069 | None:intergenic | 40.0% | |
| ACCTGACTGTTCATTCGATA+TGG | + | chr2_4:62147102-62147121 | Msa0340750:CDS | 40.0% | |
| ACCATATCGAATGAACAGTC+AGG | - | chr2_4:62147106-62147125 | None:intergenic | 40.0% | |
| TACGTTAAAGGCTGTTGTTG+TGG | + | chr2_4:62147215-62147234 | Msa0340750:intron | 40.0% | |
| GATTTCTTGCTTAGGAAAGG+AGG | + | chr2_4:62147303-62147322 | Msa0340750:intron | 40.0% | |
| GTGCTTAAGTCATGAGATGA+GGG | - | chr2_4:62147387-62147406 | None:intergenic | 40.0% | |
| AGTGCTTAAGTCATGAGATG+AGG | - | chr2_4:62147388-62147407 | None:intergenic | 40.0% | |
| !! | TAAGCGCTTTGAGAAGCTTA+TGG | + | chr2_4:62147438-62147457 | Msa0340750:intron | 40.0% |
| ! | TAAGTTGGCAACATAAGCTC+TGG | + | chr2_4:62147557-62147576 | Msa0340750:intron | 40.0% |
| TTATCTAAGCACTCCTTTGG+AGG | + | chr2_4:62147621-62147640 | Msa0340750:intron | 40.0% | |
| TTTAGTATGCAGAGCCTTAG+AGG | - | chr2_4:62147661-62147680 | None:intergenic | 40.0% | |
| !!! | TTTTTTTATTTGCGAGGGGG+TGG | + | chr2_4:62147792-62147811 | Msa0340750:intron | 40.0% |
| !!! | TTTTTTATTTGCGAGGGGGT+GGG | + | chr2_4:62147793-62147812 | Msa0340750:intron | 40.0% |
| AAACTGTAGTAACAGCTGCA+AGG | - | chr2_4:62147943-62147962 | None:intergenic | 40.0% | |
| ACACCCCTCTTTAACAAGAT+CGG | + | chr2_4:62147973-62147992 | Msa0340750:CDS | 40.0% | |
| TTATGGACCACCTATAATGG+TGG | - | chr2_4:62148145-62148164 | None:intergenic | 40.0% | |
| ATTGCTGAGGATGATATGAC+TGG | + | chr2_4:62148382-62148401 | Msa0340750:CDS | 40.0% | |
| !! | AGTAGCTCTGGATAGGAAAT+TGG | + | chr2_4:62148423-62148442 | Msa0340750:CDS | 40.0% |
| TCACTTTGTGGGAAAAAGCT+CGG | + | chr2_4:62148576-62148595 | Msa0340750:intron | 40.0% | |
| AGAGATATTTCAGCTGCCAA+TGG | + | chr2_4:62148680-62148699 | Msa0340750:CDS | 40.0% | |
| GAGATATTTCAGCTGCCAAT+GGG | + | chr2_4:62148681-62148700 | Msa0340750:CDS | 40.0% | |
| CTGACCTTGTTCCTATACTT+TGG | + | chr2_4:62148810-62148829 | Msa0340750:CDS | 40.0% | |
| TAAGGGTAGTTTCGGAAACA+TGG | - | chr2_4:62149076-62149095 | None:intergenic | 40.0% | |
| !!! | ACTGCAAGGGTTTTATTCCA+AGG | + | chr2_4:62149135-62149154 | Msa0340750:intron | 40.0% |
| AGGCATATGCTTATGATGGT+TGG | + | chr2_4:62149509-62149528 | Msa0340750:intron | 40.0% | |
| CTCATATCCTTCAGTGATAG+GGG | - | chr2_4:62149563-62149582 | None:intergenic | 40.0% | |
| GCTCATATCCTTCAGTGATA+GGG | - | chr2_4:62149564-62149583 | None:intergenic | 40.0% | |
| TGCTCATATCCTTCAGTGAT+AGG | - | chr2_4:62149565-62149584 | None:intergenic | 40.0% | |
| CCTGCTTCAATAGAATGATG+AGG | - | chr2_4:62149589-62149608 | None:intergenic | 40.0% | |
| CCTCATCATTCTATTGAAGC+AGG | + | chr2_4:62149586-62149605 | Msa0340750:CDS | 40.0% | |
| ! | CAGTCAGTTTACTCTTTTGC+AGG | + | chr2_4:62149911-62149930 | Msa0340750:intron | 40.0% |
| TTTGTACTGCTTGTCCTAAC+TGG | - | chr2_4:62149987-62150006 | None:intergenic | 40.0% | |
| TTGATTCCACTCTTCTACCT+GGG | - | chr2_4:62150066-62150085 | None:intergenic | 40.0% | |
| ! | ATTGATTCCACTCTTCTACC+TGG | - | chr2_4:62150067-62150086 | None:intergenic | 40.0% |
| ATGCCATAATTATCGGAGAC+TGG | + | chr2_4:62150232-62150251 | Msa0340750:intron | 40.0% | |
| TGTCCAGTCTCCGATAATTA+TGG | - | chr2_4:62150238-62150257 | None:intergenic | 40.0% | |
| ! | ACTGGACACCCTCTTATTTA+TGG | + | chr2_4:62150250-62150269 | Msa0340750:intron | 40.0% |
| ! | TATGGCATTTTACCAGAGAC+TGG | + | chr2_4:62150268-62150287 | Msa0340750:intron | 40.0% |
| TCTTCACGGAATAGATCAAG+AGG | - | chr2_4:62150496-62150515 | None:intergenic | 40.0% | |
| CTTGATCTATTCCGTGAAGA+TGG | + | chr2_4:62150496-62150515 | Msa0340750:intron | 40.0% | |
| CTCTCCCTACTATCGTTATT+AGG | + | chr2_4:62150713-62150732 | Msa0340750:intron | 40.0% | |
| AAGCCAATTCTTACCTTTGC+AGG | - | chr2_4:62150858-62150877 | None:intergenic | 40.0% | |
| TTAGGCAAACACATGGATCT+CGG | + | chr2_4:62151029-62151048 | Msa0340750:CDS | 40.0% | |
| GATTATGTTTGTGAGCAGCA+TGG | + | chr2_4:62151182-62151201 | Msa0340750:intron | 40.0% | |
| GGATCTCAGACTGTATTTAC+TGG | + | chr2_4:62151304-62151323 | Msa0340750:CDS | 40.0% | |
| CTGTTGAACAGTCCATTGTA+AGG | + | chr2_4:62151368-62151387 | Msa0340750:CDS | 40.0% | |
| TTCATGATGCTGAACCATCA+CGG | - | chr2_4:62151428-62151447 | None:intergenic | 40.0% | |
| TGAAGAGAACTCTCCAATCT+TGG | + | chr2_4:62151444-62151463 | Msa0340750:CDS | 40.0% | |
| TGTAACACAGGTTCCAAGAT+TGG | - | chr2_4:62151460-62151479 | None:intergenic | 40.0% | |
| ACATTCATAACATGCATCGG+TGG | - | chr2_4:62151502-62151521 | None:intergenic | 40.0% | |
| CAGGAGAAGTTTCATGTTGT+GGG | - | chr2_4:62151537-62151556 | None:intergenic | 40.0% | |
| !! | CAAGAATGTTTGACCGGTTT+TGG | - | chr2_4:62151567-62151586 | None:intergenic | 40.0% |
| ACATATGAGGATGCCTGAAA+TGG | + | chr2_4:62151604-62151623 | Msa0340750:exon | 40.0% | |
| ATGTTTAATCACCCTTGAGG+AGG | - | chr2_4:62151713-62151732 | None:intergenic | 40.0% | |
| !!! | CTTGAGTTTGGCCTTTTTTG+TGG | + | chr2_4:62151786-62151805 | Msa0340750:three_prime_UTR | 40.0% |
| GTTAAAGGCTGTTGTTGTGG+TGG | + | chr2_4:62147218-62147237 | Msa0340750:intron | 45.0% | |
| TAAGTCATGAGATGAGGGCA+AGG | - | chr2_4:62147382-62147401 | None:intergenic | 45.0% | |
| ! | TAAGCACTCCTTTGGAGGTT+TGG | + | chr2_4:62147626-62147645 | Msa0340750:intron | 45.0% |
| !! | TTTTTATTTGCGAGGGGGTG+GGG | + | chr2_4:62147794-62147813 | Msa0340750:intron | 45.0% |
| AGTAACAGCTGCAAGGTCTA+TGG | - | chr2_4:62147936-62147955 | None:intergenic | 45.0% | |
| TGAAGTCATGGAAGTAGCTC+TGG | + | chr2_4:62148411-62148430 | Msa0340750:CDS | 45.0% | |
| !! | TCATGGAAGTAGCTCTGGAT+AGG | + | chr2_4:62148416-62148435 | Msa0340750:CDS | 45.0% |
| GATGGTATACCAGTTGCAGA+AGG | - | chr2_4:62148483-62148502 | None:intergenic | 45.0% | |
| AAATTGGCGACCTCACTTTG+TGG | + | chr2_4:62148564-62148583 | Msa0340750:intron | 45.0% | |
| AATTGGCGACCTCACTTTGT+GGG | + | chr2_4:62148565-62148584 | Msa0340750:intron | 45.0% | |
| !! | GAGCTTTTTCCCACAAAGTG+AGG | - | chr2_4:62148577-62148596 | None:intergenic | 45.0% |
| GATATGGAGGTTGCAGCTAT+TGG | + | chr2_4:62148710-62148729 | Msa0340750:CDS | 45.0% | |
| CAGCTATTGGTGCAGTTTGT+GGG | + | chr2_4:62148723-62148742 | Msa0340750:CDS | 45.0% | |
| AGGAACAAGGTCAGTTCTGT+AGG | - | chr2_4:62148804-62148823 | None:intergenic | 45.0% | |
| AAGCGGTTATCATACCTCTC+AGG | + | chr2_4:62148881-62148900 | Msa0340750:intron | 45.0% | |
| AGCGGTTATCATACCTCTCA+GGG | + | chr2_4:62148882-62148901 | Msa0340750:intron | 45.0% | |
| AAGAGGTAATAGCCAACCAG+GGG | - | chr2_4:62148912-62148931 | None:intergenic | 45.0% | |
| CAAGAGGTAATAGCCAACCA+GGG | - | chr2_4:62148913-62148932 | None:intergenic | 45.0% | |
| !! | GACGGAGAGAGTACTTGTAT+TGG | + | chr2_4:62149379-62149398 | Msa0340750:intron | 45.0% |
| AGCATATGCCTGACCAGAAA+AGG | - | chr2_4:62149500-62149519 | None:intergenic | 45.0% | |
| GGTCAGGCATATGCTTATGA+TGG | + | chr2_4:62149505-62149524 | Msa0340750:intron | 45.0% | |
| CTCCAGTTCTTTGGACAAGT+GGG | - | chr2_4:62149786-62149805 | None:intergenic | 45.0% | |
| TCTCCAGTTCTTTGGACAAG+TGG | - | chr2_4:62149787-62149806 | None:intergenic | 45.0% | |
| ! | TTACTCTTTTGCAGGCTCTG+TGG | + | chr2_4:62149919-62149938 | Msa0340750:intron | 45.0% |
| TTCCTCTCCATTGGGCTAAA+AGG | + | chr2_4:62150115-62150134 | Msa0340750:intron | 45.0% | |
| ! | ATGACAGCCTTTTAGCCCAA+TGG | - | chr2_4:62150125-62150144 | None:intergenic | 45.0% |
| TGCATATGGGTCCATCTTCA+CGG | - | chr2_4:62150510-62150529 | None:intergenic | 45.0% | |
| TGTTCCAATCGTGGAGCTAA+GGG | - | chr2_4:62150618-62150637 | None:intergenic | 45.0% | |
| TTGTTCCAATCGTGGAGCTA+AGG | - | chr2_4:62150619-62150638 | None:intergenic | 45.0% | |
| ATTGATTAACCCCGTCAGCA+TGG | - | chr2_4:62150672-62150691 | None:intergenic | 45.0% | |
| TTGCAGGTGGTATCAGGAAA+GGG | - | chr2_4:62150842-62150861 | None:intergenic | 45.0% | |
| TTTGCAGGTGGTATCAGGAA+AGG | - | chr2_4:62150843-62150862 | None:intergenic | 45.0% | |
| TTTCCTGATACCACCTGCAA+AGG | + | chr2_4:62150842-62150861 | Msa0340750:CDS | 45.0% | |
| TTACCTTTGCAGGTGGTATC+AGG | - | chr2_4:62150848-62150867 | None:intergenic | 45.0% | |
| CCAATTCTTACCTTTGCAGG+TGG | - | chr2_4:62150855-62150874 | None:intergenic | 45.0% | |
| CCACCTGCAAAGGTAAGAAT+TGG | + | chr2_4:62150852-62150871 | Msa0340750:intron | 45.0% | |
| TGAAAGGCAGTGATCTGCTT+TGG | + | chr2_4:62150921-62150940 | Msa0340750:intron | 45.0% | |
| AGCCTCAACAAGCTGCATTT+AGG | + | chr2_4:62151011-62151030 | Msa0340750:intron | 45.0% | |
| !! | TGCCTAAATGCAGCTTGTTG+AGG | - | chr2_4:62151016-62151035 | None:intergenic | 45.0% |
| GCTGCATTTAGGCAAACACA+TGG | + | chr2_4:62151022-62151041 | Msa0340750:CDS | 45.0% | |
| TCATGATGCTGAACCATCAC+GGG | - | chr2_4:62151427-62151446 | None:intergenic | 45.0% | |
| ! | TTCATAACATGCATCGGTGG+CGG | - | chr2_4:62151499-62151518 | None:intergenic | 45.0% |
| CCAGGAGAAGTTTCATGTTG+TGG | - | chr2_4:62151538-62151557 | None:intergenic | 45.0% | |
| CCACAACATGAAACTTCTCC+TGG | + | chr2_4:62151535-62151554 | Msa0340750:CDS | 45.0% | |
| ATTAACCACAGCTGTCTCCT+TGG | - | chr2_4:62151690-62151709 | None:intergenic | 45.0% | |
| CTGTGGTTAATCCTCCTCAA+GGG | + | chr2_4:62151699-62151718 | Msa0340750:three_prime_UTR | 45.0% | |
| !!! | TTTTTAAAAAAAAAAAATGA+TGG | + | chr2_4:62148614-62148633 | Msa0340750:intron | 5.0% |
| CCAAGAAGACAGGCATAGGT+AGG | - | chr2_4:62147046-62147065 | None:intergenic | 50.0% | |
| CCTACCTATGCCTGTCTTCT+TGG | + | chr2_4:62147043-62147062 | Msa0340750:CDS | 50.0% | |
| ! | GGAAAGGAGGAAGCACAAAC+AGG | + | chr2_4:62147316-62147335 | Msa0340750:intron | 50.0% |
| ! | CACTCCTTTGGAGGTTTGGA+GGG | + | chr2_4:62147630-62147649 | Msa0340750:intron | 50.0% |
| TTTGGAGGGATGGACCTCTA+AGG | + | chr2_4:62147644-62147663 | Msa0340750:intron | 50.0% | |
| GACTGGCGATGATGAAGTCA+TGG | + | chr2_4:62148399-62148418 | Msa0340750:CDS | 50.0% | |
| TACTCGCTTCCTTCTGCAAC+TGG | + | chr2_4:62148471-62148490 | Msa0340750:CDS | 50.0% | |
| TATTTCAGCTGCCAATGGGC+TGG | + | chr2_4:62148685-62148704 | Msa0340750:CDS | 50.0% | |
| !! | TGCCAATGGGCTGGATGATA+TGG | + | chr2_4:62148694-62148713 | Msa0340750:CDS | 50.0% |
| CTCCATATCATCCAGCCCAT+TGG | - | chr2_4:62148699-62148718 | None:intergenic | 50.0% | |
| !! | CAATGGGCTGGATGATATGG+AGG | + | chr2_4:62148697-62148716 | Msa0340750:CDS | 50.0% |
| GCAGCTATTGGTGCAGTTTG+TGG | + | chr2_4:62148722-62148741 | Msa0340750:CDS | 50.0% | |
| GCGGTTATCATACCTCTCAG+GGG | + | chr2_4:62148883-62148902 | Msa0340750:intron | 50.0% | |
| GCAAGAGGTAATAGCCAACC+AGG | - | chr2_4:62148914-62148933 | None:intergenic | 50.0% | |
| ACGGGACAGAATACAGCAAG+AGG | - | chr2_4:62148929-62148948 | None:intergenic | 50.0% | |
| AACTATAGCCTATGCGCCCA+TGG | + | chr2_4:62149408-62149427 | Msa0340750:intron | 50.0% | |
| GGAGAAACCCCTATCACTGA+AGG | + | chr2_4:62149553-62149572 | Msa0340750:CDS | 50.0% | |
| TGCCCACTTGTCCAAAGAAC+TGG | + | chr2_4:62149781-62149800 | Msa0340750:intron | 50.0% | |
| ! | AGCCTTTTAGCCCAATGGAG+AGG | - | chr2_4:62150120-62150139 | None:intergenic | 50.0% |
| TCTTCCCTTAGCTCCACGAT+TGG | + | chr2_4:62150611-62150630 | Msa0340750:intron | 50.0% | |
| GTCGTCTGTTGTTCCAATCG+TGG | - | chr2_4:62150627-62150646 | None:intergenic | 50.0% | |
| TGCAGGTGGTATCAGGAAAG+GGG | - | chr2_4:62150841-62150860 | None:intergenic | 50.0% | |
| CTCACTCTGTAGCTGCAGTT+AGG | + | chr2_4:62151047-62151066 | Msa0340750:CDS | 50.0% | |
| GCTGCAGTTAGGCAAACACA+TGG | + | chr2_4:62151058-62151077 | Msa0340750:CDS | 50.0% | |
| ! | CTGGAAATCGGTTCATGGCA+AGG | + | chr2_4:62151323-62151342 | Msa0340750:CDS | 50.0% |
| AAGGATTGACACTCCCGTGA+TGG | + | chr2_4:62151411-62151430 | Msa0340750:CDS | 50.0% | |
| CTCCTGGTGAACACCAAAAC+CGG | + | chr2_4:62151551-62151570 | Msa0340750:CDS | 50.0% | |
| CAAGGCCACATCATCACAAG+AGG | + | chr2_4:62151640-62151659 | Msa0340750:three_prime_UTR | 50.0% | |
| AATAGCCAAGGAGACAGCTG+TGG | + | chr2_4:62151682-62151701 | Msa0340750:three_prime_UTR | 50.0% | |
| GCTGTGGTTAATCCTCCTCA+AGG | + | chr2_4:62151698-62151717 | Msa0340750:three_prime_UTR | 50.0% | |
| ! | GCACTCCTTTGGAGGTTTGG+AGG | + | chr2_4:62147629-62147648 | Msa0340750:intron | 55.0% |
| CCATCCCTCCAAACCTCCAA+AGG | - | chr2_4:62147637-62147656 | None:intergenic | 55.0% | |
| ! | CCTTTGGAGGTTTGGAGGGA+TGG | + | chr2_4:62147634-62147653 | Msa0340750:intron | 55.0% |
| !! | GTGGGGTATTGGTAGACTGG+TGG | + | chr2_4:62147811-62147830 | Msa0340750:intron | 55.0% |
| !! | GGGTATTGGTAGACTGGTGG+TGG | + | chr2_4:62147814-62147833 | Msa0340750:intron | 55.0% |
| TTGAAGGACCATGGGCGCAT+AGG | - | chr2_4:62149419-62149438 | None:intergenic | 55.0% | |
| TCCTGTCCCAGGTAGAAGAG+TGG | + | chr2_4:62150057-62150076 | Msa0340750:intron | 55.0% | |
| TCCACTCTTCTACCTGGGAC+AGG | - | chr2_4:62150061-62150080 | None:intergenic | 55.0% | |
| CTCTTGGGGCTTCGCTTTCT+TGG | + | chr2_4:62150179-62150198 | Msa0340750:intron | 55.0% | |
| ! | GATATGGGGTGTCCAGTCTC+TGG | - | chr2_4:62150283-62150302 | None:intergenic | 55.0% |
| GTCAGCATGGAAATCGCTGG+GGG | - | chr2_4:62150659-62150678 | None:intergenic | 55.0% | |
| CGTCAGCATGGAAATCGCTG+GGG | - | chr2_4:62150660-62150679 | None:intergenic | 55.0% | |
| CCGTCAGCATGGAAATCGCT+GGG | - | chr2_4:62150661-62150680 | None:intergenic | 55.0% | |
| CCCAGCGATTTCCATGCTGA+CGG | + | chr2_4:62150658-62150677 | Msa0340750:CDS | 55.0% | |
| CCAGCGATTTCCATGCTGAC+GGG | + | chr2_4:62150659-62150678 | Msa0340750:CDS | 55.0% | |
| CAGCGATTTCCATGCTGACG+GGG | + | chr2_4:62150660-62150679 | Msa0340750:CDS | 55.0% | |
| AGTCTCAGCTAGCTGCAGCT+AGG | + | chr2_4:62151272-62151291 | Msa0340750:intron | 55.0% | |
| GCTGCAGCTAGGCAAAGACA+TGG | + | chr2_4:62151283-62151302 | Msa0340750:CDS | 55.0% | |
| ! | GGGGAGGTATGCTGTAACAC+AGG | - | chr2_4:62151472-62151491 | None:intergenic | 55.0% |
| ! | ATAACATGCATCGGTGGCGG+TGG | - | chr2_4:62151496-62151515 | None:intergenic | 55.0% |
| !!! | GACCGGTTTTGGTGTTCACC+AGG | - | chr2_4:62151556-62151575 | None:intergenic | 55.0% |
| TTTGCGAGGGGGTGGGGTAT+TGG | + | chr2_4:62147800-62147819 | Msa0340750:intron | 60.0% | |
| !! | GGGGTGGGGTATTGGTAGAC+TGG | + | chr2_4:62147808-62147827 | Msa0340750:intron | 60.0% |
| CGTCTCTGAACTCCTGTCCC+AGG | + | chr2_4:62150046-62150065 | Msa0340750:CDS | 60.0% | |
| CCCGTCAGCATGGAAATCGC+TGG | - | chr2_4:62150662-62150681 | None:intergenic | 60.0% | |
| TACCTCTCAGGGGATGCCCC+TGG | + | chr2_4:62148893-62148912 | Msa0340750:intron | 65.0% | |
| !! | AACCAGGGGCATCCCCTGAG+AGG | - | chr2_4:62148898-62148917 | None:intergenic | 65.0% |
| TCTCAGGGGATGCCCCTGGT+TGG | + | chr2_4:62148897-62148916 | Msa0340750:intron | 65.0% | |
| ! | ACATGCATCGGTGGCGGTGG+CGG | - | chr2_4:62151493-62151512 | None:intergenic | 65.0% |
| ! | ATGCATCGGTGGCGGTGGCG+GGG | - | chr2_4:62151491-62151510 | None:intergenic | 70.0% |
| ! | CATGCATCGGTGGCGGTGGC+GGG | - | chr2_4:62151492-62151511 | None:intergenic | 70.0% |
| !!! | CATCGGTGGCGGTGGCGGGG+AGG | - | chr2_4:62151488-62151507 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 62146941 | 62151815 | 62146941 | ID=Msa0340750;Name=Msa0340750 |
| chr2_4 | mRNA | 62146941 | 62151815 | 62146941 | ID=Msa0340750-mRNA-1;Parent=Msa0340750;Name=Msa0340750-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.88|0.8|1|0.88|0.9|10|194|491 |
| chr2_4 | exon | 62146941 | 62147123 | 62146941 | ID=Msa0340750-mRNA-1:exon:19692;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62147932 | 62148007 | 62147932 | ID=Msa0340750-mRNA-1:exon:19693;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62148374 | 62148492 | 62148374 | ID=Msa0340750-mRNA-1:exon:19694;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62148665 | 62148885 | 62148665 | ID=Msa0340750-mRNA-1:exon:19695;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62149511 | 62149607 | 62149511 | ID=Msa0340750-mRNA-1:exon:19696;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62149933 | 62150067 | 62149933 | ID=Msa0340750-mRNA-1:exon:19697;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62150622 | 62150705 | 62150622 | ID=Msa0340750-mRNA-1:exon:19698;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62150795 | 62150863 | 62150795 | ID=Msa0340750-mRNA-1:exon:19699;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62151013 | 62151156 | 62151013 | ID=Msa0340750-mRNA-1:exon:19700;Parent=Msa0340750-mRNA-1 |
| chr2_4 | exon | 62151274 | 62151815 | 62151274 | ID=Msa0340750-mRNA-1:exon:19701;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62146941 | 62147123 | 62146941 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62147932 | 62148007 | 62147932 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62148374 | 62148492 | 62148374 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62148665 | 62148885 | 62148665 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62149511 | 62149607 | 62149511 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62149933 | 62150067 | 62149933 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62150622 | 62150705 | 62150622 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62150795 | 62150863 | 62150795 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62151013 | 62151156 | 62151013 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | CDS | 62151274 | 62151621 | 62151274 | ID=Msa0340750-mRNA-1:cds;Parent=Msa0340750-mRNA-1 |
| chr2_4 | three_prime_UTR | 62151622 | 62151815 | 62151622 | ID=Msa0340750-mRNA-1:three_prime_utr;Parent=Msa0340750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
