AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0341720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341720 MtrunA17_Chr2g0334111 97.214 323 8 1 1 322 1 323 0.0 650
Msa0341720 MtrunA17_Chr7g0268241 76.101 318 70 4 9 322 35 350 1.40e-178 497
Msa0341720 MtrunA17_Chr7g0269541 40.867 323 178 3 13 322 234 556 4.17e-82 258
Msa0341720 MtrunA17_Chr1g0192331 41.083 314 166 6 25 320 214 526 4.13e-79 250
Msa0341720 MtrunA17_Chr3g0079341 40.000 325 178 5 15 322 203 527 3.04e-76 243
Msa0341720 MtrunA17_Chr8g0391291 37.920 327 186 5 13 322 213 539 3.67e-76 243
Msa0341720 MtrunA17_Chr7g0272141 39.938 323 172 4 13 322 229 542 3.67e-76 243
Msa0341720 MtrunA17_Chr8g0391311 38.339 313 179 4 24 322 229 541 4.76e-76 242
Msa0341720 MtrunA17_Chr3g0090091 40.127 314 173 4 24 322 215 528 2.44e-75 240
Msa0341720 MtrunA17_Chr4g0069881 40.193 311 166 5 25 318 224 531 2.82e-75 240
Msa0341720 MtrunA17_Chr3g0079361 39.809 314 174 4 24 322 214 527 8.05e-75 239
Msa0341720 MtrunA17_Chr4g0018371 39.744 312 173 4 24 320 226 537 2.67e-74 238
Msa0341720 MtrunA17_Chr3g0080381 42.173 313 158 7 25 318 316 624 4.51e-74 239
Msa0341720 MtrunA17_Chr4g0069841 37.888 322 186 4 15 322 195 516 4.68e-74 236
Msa0341720 MtrunA17_Chr1g0175661 40.506 316 167 7 25 322 246 558 1.34e-73 236
Msa0341720 MtrunA17_Chr7g0269521 40.764 314 169 5 25 322 250 562 2.23e-73 236
Msa0341720 MtrunA17_Chr3g0079351 39.077 325 181 5 15 322 203 527 2.31e-73 235
Msa0341720 MtrunA17_Chr7g0269531 39.365 315 173 5 25 322 252 565 2.34e-73 236
Msa0341720 MtrunA17_Chr4g0011771 39.871 311 173 4 24 322 205 513 3.54e-73 234
Msa0341720 MtrunA17_Chr8g0354911 41.667 312 161 6 25 318 300 608 9.99e-73 236
Msa0341720 MtrunA17_Chr1g0195301 39.677 310 170 5 29 322 247 555 1.72e-72 233
Msa0341720 MtrunA17_Chr1g0195321 39.677 310 170 5 29 322 247 555 1.72e-72 233
Msa0341720 MtrunA17_Chr7g0269511 40.446 314 170 6 25 322 252 564 4.85e-72 233
Msa0341720 MtrunA17_Chr1g0195331 39.677 310 170 5 29 322 247 555 9.10e-72 232
Msa0341720 MtrunA17_Chr7g0233831 38.854 314 177 3 24 322 242 555 2.10e-71 231
Msa0341720 MtrunA17_Chr2g0302021 34.783 322 196 4 15 322 204 525 2.87e-70 227
Msa0341720 MtrunA17_Chr4g0011791 39.871 311 170 6 24 322 204 509 3.71e-70 226
Msa0341720 MtrunA17_Chr1g0195351 39.032 310 170 6 29 322 247 553 9.56e-69 224
Msa0341720 MtrunA17_Chr8g0345281 37.662 308 179 3 24 318 278 585 4.11e-68 223
Msa0341720 MtrunA17_Chr4g0069861 36.943 314 185 3 22 322 204 517 1.67e-67 219
Msa0341720 MtrunA17_Chr3g0126771 35.783 313 187 4 24 322 285 597 4.34e-67 220
Msa0341720 MtrunA17_Chr7g0233771 37.742 310 178 3 24 318 241 550 8.33e-67 219
Msa0341720 MtrunA17_Chr3g0080391 36.218 312 181 6 24 322 268 574 1.49e-66 218
Msa0341720 MtrunA17_Chr1g0192321 34.713 314 185 6 24 320 271 581 2.62e-66 218
Msa0341720 MtrunA17_Chr4g0011751 35.962 317 183 6 19 317 170 484 2.12e-65 213
Msa0341720 MtrunA17_Chr1g0194091 37.261 314 178 4 24 318 252 565 3.84e-65 214
Msa0341720 MtrunA17_Chr1g0147051 36.624 314 184 5 24 322 294 607 1.21e-64 214
Msa0341720 MtrunA17_Chr8g0354901 36.859 312 179 6 24 322 275 581 1.31e-64 213
Msa0341720 MtrunA17_Chr7g0233801 36.137 321 189 4 13 318 230 549 3.29e-64 212
Msa0341720 MtrunA17_Chr2g0295531 36.422 313 180 5 24 318 231 542 2.72e-63 211
Msa0341720 MtrunA17_Chr8g0345211 37.037 324 186 6 14 322 262 582 3.56e-63 210
Msa0341720 MtrunA17_Chr7g0234711 41.176 255 143 3 73 322 17 269 7.04e-63 200
Msa0341720 MtrunA17_Chr1g0195311 40.755 265 143 4 71 322 51 314 8.01e-63 202
Msa0341720 MtrunA17_Chr4g0067611 35.463 313 183 6 24 318 257 568 6.87e-62 206
Msa0341720 MtrunA17_Chr4g0067601 34.824 313 185 5 24 318 257 568 3.54e-61 204
Msa0341720 MtrunA17_Chr4g0000121 33.861 316 191 6 24 322 243 557 1.40e-60 202
Msa0341720 MtrunA17_Chr1g0192301 34.615 312 186 6 24 318 261 571 1.83e-60 202
Msa0341720 MtrunA17_Chr1g0194081 36.859 312 178 6 22 318 252 559 3.01e-60 202
Msa0341720 MtrunA17_Chr1g0192311 33.648 318 193 6 22 322 254 570 3.52e-60 202
Msa0341720 MtrunA17_Chr1g0192281 33.648 318 193 6 22 322 254 570 3.52e-60 202
Msa0341720 MtrunA17_Chr2g0302001 42.424 231 124 4 94 318 206 433 4.36e-60 198
Msa0341720 MtrunA17_Chr2g0295551 35.331 317 186 6 20 318 245 560 7.31e-59 198
Msa0341720 MtrunA17_Chr7g0272151 32.797 311 192 5 24 318 270 579 9.86e-58 196
Msa0341720 MtrunA17_Chr5g0437831 35.370 311 184 4 24 319 72 380 5.11e-57 189
Msa0341720 MtrunA17_Chr7g0270691 34.516 310 187 5 25 320 240 547 5.20e-56 190
Msa0341720 MtrunA17_Chr8g0380581 34.259 324 195 5 15 322 55 376 5.22e-55 183
Msa0341720 MtrunA17_Chr8g0384121 38.276 290 150 8 22 284 242 529 5.90e-55 188
Msa0341720 MtrunA17_Chr4g0069891 32.492 317 199 5 14 317 274 588 1.27e-54 187
Msa0341720 MtrunA17_Chr2g0301931 36.491 285 159 8 53 322 15 292 1.05e-53 177
Msa0341720 MtrunA17_Chr2g0295541 32.277 347 187 7 20 318 245 591 1.55e-52 182
Msa0341720 MtrunA17_Chr3g0129921 36.860 293 155 7 22 284 237 529 2.10e-52 181
Msa0341720 MtrunA17_Chr7g0270661 33.333 312 190 4 24 317 258 569 8.05e-50 174
Msa0341720 MtrunA17_Chr7g0270671 33.333 312 190 4 24 317 258 569 8.05e-50 174
Msa0341720 MtrunA17_Chr7g0271381 30.284 317 198 6 25 320 240 554 1.31e-49 173
Msa0341720 MtrunA17_Chr7g0270651 31.529 314 197 4 24 319 258 571 6.50e-48 169
Msa0341720 MtrunA17_Chr6g0453551 32.509 283 163 4 25 287 6 280 1.47e-47 162
Msa0341720 MtrunA17_Chr7g0217941 32.014 278 161 4 27 284 8 277 1.26e-46 160
Msa0341720 MtrunA17_Chr7g0270631 32.323 297 188 3 24 307 246 542 1.14e-44 163
Msa0341720 MtrunA17_Chr7g0270631 29.565 345 207 5 8 319 778 1119 6.58e-43 158
Msa0341720 MtrunA17_Chr6g0487101 33.887 301 164 6 33 311 93 380 7.44e-43 152
Msa0341720 MtrunA17_Chr8g0389771 31.962 316 177 7 22 313 78 379 2.62e-41 147
Msa0341720 MtrunA17_Chr1g0194311 30.938 320 188 7 14 313 64 370 6.14e-41 146
Msa0341720 MtrunA17_Chr6g0466961 32.482 274 157 6 25 284 40 299 2.34e-39 141
Msa0341720 MtrunA17_Chr6g0466951 32.841 271 160 5 25 284 69 328 1.62e-38 139
Msa0341720 MtrunA17_Chr8g0351871 29.851 335 198 10 1 311 1 322 1.13e-35 131
Msa0341720 MtrunA17_Chr7g0258341 28.797 316 190 8 19 311 84 387 2.77e-35 132
Msa0341720 MtrunA17_Chr5g0399221 28.846 312 188 6 25 314 63 362 1.52e-34 129
Msa0341720 MtrunA17_Chr4g0070051 29.197 274 166 6 22 276 50 314 1.48e-33 126
Msa0341720 MtrunA17_Chr5g0446301 27.303 304 185 6 31 311 67 357 2.47e-33 125
Msa0341720 MtrunA17_Chr7g0265201 30.526 285 161 7 20 284 94 361 1.14e-29 116
Msa0341720 MtrunA17_Chr1g0161731 28.713 303 182 7 29 315 53 337 1.26e-29 115
Msa0341720 MtrunA17_Chr2g0295851 27.640 322 186 11 12 313 44 338 1.56e-29 115
Msa0341720 MtrunA17_Chr8g0391261 37.500 136 84 1 188 322 31 166 2.58e-29 110
Msa0341720 MtrunA17_Chr2g0294321 26.074 326 195 9 12 313 45 348 2.95e-29 114
Msa0341720 MtrunA17_Chr5g0440871 30.034 293 186 6 25 311 39 318 5.79e-29 113
Msa0341720 MtrunA17_Chr4g0037751 29.779 272 168 6 25 281 71 334 2.00e-28 112
Msa0341720 MtrunA17_Chr5g0420831 27.815 302 192 7 25 311 71 361 2.29e-26 107
Msa0341720 MtrunA17_Chr4g0025841 31.343 268 159 8 1 253 3 260 9.44e-26 103
Msa0341720 MtrunA17_Chr2g0299431 30.244 205 130 4 24 215 51 255 4.31e-23 96.7
Msa0341720 MtrunA17_Chr6g0459781 32.948 173 95 4 25 178 13 183 6.64e-23 94.4
Msa0341720 MtrunA17_Chr5g0440901 35.714 140 74 3 120 254 12 140 3.79e-22 90.9
Msa0341720 MtrunA17_Chr2g0314691 28.497 193 125 4 121 311 20 201 1.38e-19 85.5
Msa0341720 MtrunA17_Chr4g0073911 29.258 229 135 6 14 224 4 223 3.24e-18 82.4
Msa0341720 MtrunA17_Chr5g0437821 31.783 129 84 1 129 253 4 132 7.20e-18 79.0
Msa0341720 MtrunA17_Chr5g0440891 32.298 161 105 3 22 179 45 204 1.38e-13 68.6
Msa0341720 MtrunA17_Chr6g0460141 28.571 140 83 2 53 175 5 144 5.28e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341720 AT4G03930.1 40.491 326 175 5 12 322 203 524 2.18e-77 246
Msa0341720 AT1G11590.1 39.877 326 177 5 12 322 203 524 2.92e-76 243
Msa0341720 AT3G27980.1 40.446 314 168 5 24 322 188 497 4.68e-76 241
Msa0341720 AT3G05620.1 40.506 316 157 6 24 322 240 541 5.94e-76 243
Msa0341720 AT5G04960.1 37.942 311 176 5 25 322 258 564 5.76e-73 235
Msa0341720 AT4G02300.1 36.677 319 189 3 13 318 210 528 1.02e-72 234
Msa0341720 AT2G26450.1 38.580 324 179 6 8 317 289 606 1.14e-72 236
Msa0341720 AT3G05610.1 39.144 327 181 5 11 322 242 565 1.53e-72 237
Msa0341720 AT4G02320.1 36.741 313 185 3 23 322 206 518 1.58e-72 233
Msa0341720 AT2G26440.1 38.961 308 174 4 24 318 237 543 2.00e-72 233
Msa0341720 AT1G02810.1 41.772 316 163 7 25 322 265 577 4.55e-72 233
Msa0341720 AT2G45220.1 40.575 313 165 7 24 322 206 511 7.47e-72 231
Msa0341720 AT4G00190.1 37.461 323 182 7 12 318 152 470 8.76e-72 230
Msa0341720 AT3G60730.1 39.228 311 173 4 24 318 205 515 1.84e-71 230
Msa0341720 AT1G11580.1 39.241 316 175 4 22 322 244 557 4.00e-71 230
Msa0341720 AT1G11580.2 39.241 316 175 4 22 322 265 578 7.95e-71 230
Msa0341720 AT5G27870.1 38.941 321 178 6 13 318 241 558 1.33e-70 233
Msa0341720 AT3G10720.2 38.924 316 172 6 25 322 303 615 1.84e-70 230
Msa0341720 AT3G43270.1 37.380 313 177 5 26 322 216 525 1.20e-69 226
Msa0341720 AT1G23200.1 39.172 314 167 5 24 322 250 554 2.47e-69 226
Msa0341720 AT5G04970.1 39.414 307 165 7 34 322 317 620 7.13e-69 226
Msa0341720 AT5G49180.1 37.217 309 179 4 24 318 259 566 7.46e-69 225
Msa0341720 AT4G33220.2 36.335 322 191 4 15 322 81 402 7.88e-69 220
Msa0341720 AT4G02330.1 38.924 316 172 7 25 322 259 571 1.42e-68 224
Msa0341720 AT5G53370.1 37.700 313 181 4 24 322 273 585 1.44e-68 224
Msa0341720 AT5G53370.2 37.700 313 181 4 24 322 309 621 3.02e-68 224
Msa0341720 AT3G06830.1 37.380 313 181 4 24 322 257 568 5.69e-68 222
Msa0341720 AT4G33220.1 36.335 322 191 4 15 322 202 523 5.77e-68 221
Msa0341720 AT4G33230.1 36.810 326 182 8 8 317 284 601 1.28e-67 223
Msa0341720 AT1G53840.1 37.459 307 173 5 24 316 280 581 2.05e-66 219
Msa0341720 AT5G51490.1 38.486 317 176 5 24 322 221 536 5.33e-66 216
Msa0341720 AT1G53830.1 38.835 309 176 3 27 322 279 587 3.59e-65 216
Msa0341720 AT3G59010.1 37.621 311 168 6 26 322 230 528 3.77e-65 214
Msa0341720 AT1G11370.1 42.562 242 127 2 24 253 45 286 3.12e-64 205
Msa0341720 AT2G47550.1 38.141 312 172 7 25 318 246 554 3.43e-64 212
Msa0341720 AT5G51500.1 37.342 316 181 4 24 322 225 540 4.39e-64 211
Msa0341720 AT3G10710.1 35.577 312 183 6 24 322 255 561 8.62e-63 209
Msa0341720 AT2G43050.1 36.335 322 178 6 13 318 202 512 1.98e-62 207
Msa0341720 AT5G20860.2 35.714 322 186 7 15 320 220 536 3.82e-62 206
Msa0341720 AT3G47400.1 36.086 327 193 4 12 322 268 594 5.99e-62 207
Msa0341720 AT3G49220.1 37.061 313 183 4 24 322 284 596 7.53e-62 207
Msa0341720 AT3G10720.1 40.154 259 141 4 77 322 2 259 8.63e-62 197
Msa0341720 AT3G14310.1 36.393 305 181 3 27 318 284 588 1.58e-61 206
Msa0341720 AT3G49220.3 37.061 313 183 4 24 322 329 641 2.14e-61 207
Msa0341720 AT3G14300.1 35.759 316 180 7 20 317 656 966 2.24e-58 202
Msa0341720 AT2G47040.1 35.065 308 182 5 26 317 285 590 1.55e-55 190
Msa0341720 AT3G62170.1 33.441 311 187 5 26 319 278 585 8.15e-54 185
Msa0341720 AT2G47030.1 34.516 310 185 6 24 317 276 583 1.05e-53 185
Msa0341720 AT5G09760.1 36.972 284 156 6 24 284 240 523 4.06e-53 183
Msa0341720 AT5G09760.2 36.972 284 156 6 24 284 266 549 7.27e-53 182
Msa0341720 AT4G15980.1 32.476 311 195 4 24 320 391 700 1.67e-51 181
Msa0341720 AT4G15980.2 32.476 311 195 4 24 320 401 710 2.05e-51 181
Msa0341720 AT5G64640.1 33.333 321 183 10 22 315 286 602 2.60e-50 176
Msa0341720 AT5G20860.1 32.082 293 151 5 15 291 220 480 4.54e-47 166
Msa0341720 AT3G29090.1 32.509 283 163 4 22 284 4 278 1.43e-46 160
Msa0341720 AT5G19730.1 33.333 306 169 6 28 311 89 381 1.59e-45 159
Msa0341720 AT2G21610.1 34.074 270 160 5 23 284 49 308 5.95e-40 144
Msa0341720 AT2G21610.2 34.074 270 160 5 23 284 54 313 6.34e-40 144
Msa0341720 AT1G05310.1 30.503 318 186 8 17 311 83 388 8.68e-40 144
Msa0341720 AT2G36710.1 31.310 313 181 8 25 316 91 390 1.16e-39 144
Msa0341720 AT2G36700.1 31.169 308 181 8 22 311 39 333 3.89e-38 138
Msa0341720 AT5G07430.1 30.667 300 184 6 25 311 67 355 9.62e-38 138
Msa0341720 AT3G17060.1 29.968 317 192 7 12 312 35 337 8.33e-37 135
Msa0341720 AT5G55590.2 30.800 250 143 4 25 253 82 322 1.07e-33 126
Msa0341720 AT5G55590.1 29.126 309 185 6 25 311 82 378 1.37e-33 127
Msa0341720 AT5G47500.1 27.184 309 191 5 25 311 61 357 6.15e-33 125
Msa0341720 AT5G07420.1 30.258 271 168 5 25 282 67 329 9.80e-33 124
Msa0341720 AT3G24130.1 29.286 280 169 5 25 284 34 304 1.82e-32 123
Msa0341720 AT5G26810.1 30.060 336 196 8 4 311 9 333 5.61e-32 122
Msa0341720 AT5G18990.1 30.619 307 168 8 10 284 6 299 5.71e-32 122
Msa0341720 AT2G19150.1 29.508 305 186 7 24 311 40 332 4.23e-31 120
Msa0341720 AT5G61680.1 29.197 274 172 5 25 284 69 334 6.50e-30 117
Msa0341720 AT2G47280.1 28.000 325 202 7 6 311 16 327 3.33e-28 112
Msa0341720 AT1G69940.1 27.737 274 176 5 25 284 66 331 1.47e-26 108
Msa0341720 AT5G07410.1 27.737 274 176 5 25 284 66 331 2.56e-26 107
Msa0341720 AT2G19150.2 30.488 246 146 5 25 254 41 277 3.34e-25 102
Msa0341720 AT1G44980.1 32.203 177 111 1 12 179 65 241 3.70e-23 96.7

Find 88 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGGAACACAATGCTTTA+AGG 0.155904 2_4:+63592913 None:intergenic
TACCTATGGTGGAACCATTT+TGG 0.208948 2_4:+63592682 None:intergenic
GACTTTCTGTTCTCATCTTC+AGG 0.211503 2_4:+63588502 None:intergenic
ATCTCTTGGATGCTGATTCT+TGG 0.228656 2_4:-63588234 Msa0341720:CDS
TATGTTGAGTTTGAGAATTT+TGG 0.250434 2_4:-63588346 Msa0341720:CDS
GACACCTTATGGGCTGTTTC+CGG 0.252396 2_4:-63588715 Msa0341720:CDS
AAGGATTCCAAGACACCTTA+TGG 0.262225 2_4:-63588726 Msa0341720:CDS
TGGCCTGGTGTTACAGTTCT+TGG 0.279925 2_4:-63588292 Msa0341720:CDS
TTTCACTGCTTCCTATCTCT+TGG 0.309292 2_4:-63588248 Msa0341720:CDS
ATACTTGTTGCTCACCAAAA+TGG 0.309514 2_4:-63592696 Msa0341720:CDS
ATATTATAGTTCACTATGAT+AGG 0.365814 2_4:+63588192 None:intergenic
TAAGGTTGGTGACTCCAATC+AGG 0.402137 2_4:+63592816 None:intergenic
GTGAAAGGGAGTGCTTTGTT+TGG 0.404455 2_4:+63588265 None:intergenic
AGAGGTTGGGAAGGGATGTC+TGG 0.405156 2_4:-63588391 Msa0341720:CDS
TGAAAGGGAGTGCTTTGTTT+GGG 0.406102 2_4:+63588266 None:intergenic
TCAGAGGTGCATGCAACATT+AGG 0.423310 2_4:-63588481 Msa0341720:CDS
CATTCGTGGAGAAGGGTTCA+TGG 0.426255 2_4:-63588851 Msa0341720:CDS
AGAATCAGCATCCAAGAGAT+AGG 0.427401 2_4:+63588237 None:intergenic
GATAATATTAATTGTACCAT+TGG 0.442334 2_4:+63592896 None:intergenic
ATAAGGTGTCTTGGAATCCT+TGG 0.453150 2_4:+63588728 None:intergenic
CATGGTTGATCCTAGAGGTT+GGG 0.464871 2_4:-63588404 Msa0341720:CDS
CTATCAGAAATGCCCCTGAT+TGG 0.468913 2_4:-63592830 Msa0341720:CDS
CGCTGTATTTCAAGACTGCA+TGG 0.468966 2_4:-63588629 Msa0341720:CDS
GCTAAAACGTGAACGATGTA+AGG 0.471367 2_4:+63592798 None:intergenic
CGTGCAGACATTCGTGGAGA+AGG 0.473938 2_4:-63588859 Msa0341720:intron
ATAATCTCCACTCCCATCCT+TGG 0.478462 2_4:+63592869 None:intergenic
CAACATTAGGTCGTCCTTGG+AGG 0.483512 2_4:-63588468 Msa0341720:CDS
AAGATTAATATTAAGCTCCT+AGG 0.484751 2_4:-63592738 Msa0341720:CDS
GCATTGTTTCATAGATTCCA+TGG 0.486225 2_4:-63588422 Msa0341720:CDS
AGGATTCCAAGACACCTTAT+GGG 0.488271 2_4:-63588725 Msa0341720:CDS
CTTAAAGCATTGTGTTCCAA+TGG 0.491519 2_4:-63592912 Msa0341720:CDS
GATTCTTGGATTCCCTCTAC+AGG 0.495727 2_4:-63588220 Msa0341720:CDS
TCTACCGGAAACAGCCCATA+AGG 0.495858 2_4:+63588711 None:intergenic
AAACAGCCCATAAGGTGTCT+TGG 0.506742 2_4:+63588719 None:intergenic
GGAATCCTTGGATGGAGCAT+TGG 0.509770 2_4:+63588740 None:intergenic
AATATTATCGTATCCAAGGA+TGG 0.511690 2_4:-63592882 Msa0341720:CDS
GCTAGATGCAAGCGCTGCAG+TGG 0.517531 2_4:-63588797 Msa0341720:CDS
GTTCTCATCTTCAGGTGACA+TGG 0.522759 2_4:+63588510 None:intergenic
AAGAGATAGGAAGCAGTGAA+AGG 0.525350 2_4:+63588250 None:intergenic
GGCACTGTCGACTTCATCTA+CGG 0.525562 2_4:-63588661 Msa0341720:CDS
CCATGGTTGATCCTAGAGGT+TGG 0.528990 2_4:-63588405 Msa0341720:CDS
AATATTAAGCTCCTAGGTCA+TGG 0.533827 2_4:-63592732 Msa0341720:CDS
CTACCATCAGTGTTAGATCC+AGG 0.538585 2_4:+63588322 None:intergenic
AGAGATAGGAAGCAGTGAAA+GGG 0.549867 2_4:+63588251 None:intergenic
AATTAATATTATCGTATCCA+AGG 0.551137 2_4:-63592886 Msa0341720:CDS
CGTAAGGAAATTACCTATGG+TGG 0.551493 2_4:+63592671 None:intergenic
ATGCAACATTAGGTCGTCCT+TGG 0.555787 2_4:-63588471 Msa0341720:CDS
GGGTTCATGGCTCAAAACAT+TGG 0.557351 2_4:-63588838 Msa0341720:CDS
AGCTTAATATTAATCTTACT+CGG 0.563150 2_4:+63592744 None:intergenic
CACCAAAATGGTTCCACCAT+AGG 0.563382 2_4:-63592684 Msa0341720:intron
AAGGTTGGTGACTCCAATCA+GGG 0.566101 2_4:+63592817 None:intergenic
ACACTGATGGTAGAGTGGAT+TGG 0.574749 2_4:-63588312 Msa0341720:CDS
TGCAGTGGCTGTTCGAAACG+AGG 0.574998 2_4:-63588782 Msa0341720:CDS
GTGCAGACATTCGTGGAGAA+GGG 0.577291 2_4:-63588858 Msa0341720:intron
GACATCCCTTCCCAACCTCT+AGG 0.577356 2_4:+63588394 None:intergenic
GATGGTAGAGTGGATTGGCC+TGG 0.577428 2_4:-63588307 Msa0341720:CDS
TATTATAGTTCACTATGATA+GGG 0.582676 2_4:+63588193 None:intergenic
ATGATAGGGAACACCTGTAG+AGG 0.584085 2_4:+63588207 None:intergenic
AACATAAGTAACTTTATCAG+TGG 0.584093 2_4:+63588363 None:intergenic
GGACCTGGATCTAACACTGA+TGG 0.584488 2_4:-63588325 Msa0341720:CDS
ATCGTATCCAAGGATGGGAG+TGG 0.585498 2_4:-63592876 Msa0341720:CDS
AAACGTGAACGATGTAAGGT+TGG 0.585695 2_4:+63592802 None:intergenic
ATATTATCGTATCCAAGGAT+GGG 0.589849 2_4:-63592881 Msa0341720:CDS
ACATGGTGAATTTACAACGT+TGG 0.595200 2_4:+63588527 None:intergenic
AACATTAGGTCGTCCTTGGA+GGG 0.598043 2_4:-63588467 Msa0341720:CDS
ATCTAACACTGATGGTAGAG+TGG 0.599125 2_4:-63588317 Msa0341720:CDS
GTTGATCCTAGAGGTTGGGA+AGG 0.603972 2_4:-63588400 Msa0341720:CDS
GTGAATCGTGCAGACATTCG+TGG 0.608693 2_4:-63588865 Msa0341720:intron
GGTGTCTTGGAATCCTTGGA+TGG 0.617543 2_4:+63588732 None:intergenic
AGATGAGAACAGAAAGTCAG+AGG 0.617832 2_4:-63588497 Msa0341720:CDS
GAGTGGAGATTATACAAGTG+TGG 0.619088 2_4:-63592859 Msa0341720:CDS
ACATAAGTAACTTTATCAGT+GGG 0.622375 2_4:+63588364 None:intergenic
TGATAGGGAACACCTGTAGA+GGG 0.635193 2_4:+63588208 None:intergenic
GATTCCATGGTTGATCCTAG+AGG 0.635424 2_4:-63588409 Msa0341720:CDS
ACTGTAGAATATGCCCTCCA+AGG 0.643512 2_4:+63588454 None:intergenic
TTGCCAAGAACTGTAACACC+AGG 0.646375 2_4:+63588289 None:intergenic
TGCAGCAGCAGTGTTAGTGT+TGG 0.648132 2_4:-63592946 Msa0341720:CDS
AGTGGAGATTATACAAGTGT+GGG 0.660897 2_4:-63592858 Msa0341720:CDS
CCAACCTCTAGGATCAACCA+TGG 0.665177 2_4:+63588405 None:intergenic
GGTGAGCAACAAGTATTGTG+TGG 0.669918 2_4:+63592703 None:intergenic
TTGATCCTAGAGGTTGGGAA+GGG 0.674411 2_4:-63588399 Msa0341720:CDS
TGTGGTTTGAACCATGACCT+AGG 0.690844 2_4:+63592721 None:intergenic
TTAATATTAATCTTACTCGG+TGG 0.698483 2_4:+63592747 None:intergenic
TTGGAGGGCATATTCTACAG+TGG 0.702836 2_4:-63588452 Msa0341720:CDS
TGGACTTTCACGTGACTGTG+CGG 0.713693 2_4:+63588573 None:intergenic
CATGCAGTCTTGAAATACAG+CGG 0.720620 2_4:+63588630 None:intergenic
AGGTTGGTGACTCCAATCAG+GGG 0.723941 2_4:+63592818 None:intergenic
CATTGGATTTGTGAACACAG+CGG 0.782931 2_4:-63588821 Msa0341720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTTAAAAAATAAAA+CGG - chr2_4:63589934-63589953 Msa0341720:intron 0.0%
!!! TTTAAAACTTATTAAAAAAG+GGG - chr2_4:63589561-63589580 Msa0341720:intron 10.0%
!!! TTTTTTAACAAAAAATCAAA+TGG + chr2_4:63589637-63589656 None:intergenic 10.0%
!! AAGATATTAAAAAATATTGA+TGG + chr2_4:63590651-63590670 None:intergenic 10.0%
!! TATTAAAAGGAAAAATATTA+AGG - chr2_4:63591185-63591204 Msa0341720:intron 10.0%
!! ATTAAAAGGAAAAATATTAA+GGG - chr2_4:63591186-63591205 Msa0341720:intron 10.0%
!!! AATAATTTTAATTGGATATT+TGG - chr2_4:63591387-63591406 Msa0341720:intron 10.0%
!! AATAAAAATTAAAAATAAGC+AGG - chr2_4:63591913-63591932 Msa0341720:intron 10.0%
!! ATAAATATAAAAGTAACGTA+AGG + chr2_4:63588494-63588513 None:intergenic 15.0%
!! TCAAATGAAAATATTGATAA+TGG + chr2_4:63589493-63589512 None:intergenic 15.0%
!!! ATCTTTTGTTAAAATATGAT+TGG + chr2_4:63589872-63589891 None:intergenic 15.0%
!!! ATAATTAGCAAATTTTTGTT+AGG - chr2_4:63590424-63590443 Msa0341720:intron 15.0%
!! TTATAGGTGTATATATTAAT+AGG - chr2_4:63590830-63590849 Msa0341720:intron 15.0%
!! ATATATATATATTGGTATCA+CGG - chr2_4:63590862-63590881 Msa0341720:intron 15.0%
!! AATTTAATCAAATTTCAATG+AGG - chr2_4:63591133-63591152 Msa0341720:intron 15.0%
!!! TTTTAATATAATCTTAGTCT+TGG + chr2_4:63591173-63591192 None:intergenic 15.0%
!! AAGACTAAGATTATATTAAA+AGG - chr2_4:63591172-63591191 Msa0341720:intron 15.0%
!!! CCAATTAAAATTATTGTTTT+AGG + chr2_4:63591382-63591401 None:intergenic 15.0%
!!! CCTAAAACAATAATTTTAAT+TGG - chr2_4:63591379-63591398 Msa0341720:intron 15.0%
!!! AATTGTATCCATATTTTTTT+TGG - chr2_4:63591958-63591977 Msa0341720:intron 15.0%
!! AATATTCACCAAAAAAAATA+TGG + chr2_4:63591969-63591988 None:intergenic 15.0%
!!! TTGGTAAATTACTTTTTTTA+AGG + chr2_4:63592113-63592132 None:intergenic 15.0%
!! TTAGGAAAATATATATTTCA+TGG + chr2_4:63592161-63592180 None:intergenic 15.0%
!!! TGAAATATATATTTTCCTAA+TGG - chr2_4:63592161-63592180 Msa0341720:intron 15.0%
!! GATAATATTAATTGTACCAT+TGG + chr2_4:63588253-63588272 None:intergenic 20.0%
!! AATTAATATTATCGTATCCA+AGG - chr2_4:63588260-63588279 Msa0341720:CDS 20.0%
!! AGCTTAATATTAATCTTACT+CGG + chr2_4:63588405-63588424 None:intergenic 20.0%
!! TAATACAAAGAAGAACTAAA+AGG + chr2_4:63588614-63588633 None:intergenic 20.0%
!! TATCAATTTCTCAAAAGAAA+TGG + chr2_4:63589025-63589044 None:intergenic 20.0%
!!! ATTTCTTTTGAGAAATTGAT+AGG - chr2_4:63589024-63589043 Msa0341720:intron 20.0%
!! ATTTCTCTCTCATTAATTAA+TGG - chr2_4:63589183-63589202 Msa0341720:intron 20.0%
!! TATCAATTTCTCAAAAGAAA+TGG + chr2_4:63589025-63589044 None:intergenic 20.0%
!!! ATTTCTTTTGAGAAATTGAT+AGG - chr2_4:63589024-63589043 Msa0341720:intron 20.0%
!!! TTTCTTTTGAGAAATTGATA+GGG - chr2_4:63589025-63589044 Msa0341720:intron 20.0%
!! TCAAATGGAAATATTGATAA+TGG + chr2_4:63589622-63589641 None:intergenic 20.0%
!! TTTGTTAAAATATGATTGGA+TGG + chr2_4:63589868-63589887 None:intergenic 20.0%
!! AGGAATATCTATTTATTTGA+GGG + chr2_4:63590163-63590182 None:intergenic 20.0%
!! AAGGAATATCTATTTATTTG+AGG + chr2_4:63590164-63590183 None:intergenic 20.0%
!! TCAAATAAATAGATATTCCT+TGG - chr2_4:63590163-63590182 Msa0341720:intron 20.0%
!!! TATCTCTGAACATTTTTTTT+TGG - chr2_4:63590670-63590689 Msa0341720:intron 20.0%
!!! TAAGCAAAAATCTACATTTT+AGG - chr2_4:63590724-63590743 Msa0341720:intron 20.0%
!!! AAATGTAGATTTTTGCTTAT+AGG - chr2_4:63590814-63590833 Msa0341720:intron 20.0%
!!! TTTTTCATTCTCCAATATAT+TGG + chr2_4:63591009-63591028 None:intergenic 20.0%
!!! ATTTTTCGTTATATGAAACT+GGG - chr2_4:63591063-63591082 Msa0341720:intron 20.0%
!!! TTGTTTTTCTTTTAACTGTT+TGG + chr2_4:63591692-63591711 None:intergenic 20.0%
!! ACAATTTAAAAACTACTAAG+AGG + chr2_4:63591944-63591963 None:intergenic 20.0%
!! GTAGTTATGTAACAAAAATA+TGG + chr2_4:63591997-63592016 None:intergenic 20.0%
!!! GAAAGTTTAAATTTTCCATT+AGG + chr2_4:63592179-63592198 None:intergenic 20.0%
! TTAATATTAATCTTACTCGG+TGG + chr2_4:63588402-63588421 None:intergenic 25.0%
! AAGATTAATATTAAGCTCCT+AGG - chr2_4:63588408-63588427 Msa0341720:CDS 25.0%
! AAAGAAGAACTAAAAGGTAA+CGG + chr2_4:63588608-63588627 None:intergenic 25.0%
!! GTATACAAGTTCTTTTTGAA+TGG - chr2_4:63588661-63588680 Msa0341720:CDS 25.0%
! TTGTAATAAACTCATTGGAT+TGG + chr2_4:63588767-63588786 None:intergenic 25.0%
! TGATGAACTAACATCAAATA+CGG - chr2_4:63589125-63589144 Msa0341720:intron 25.0%
! GAAATACACATTAAGAAGAT+TGG + chr2_4:63589168-63589187 None:intergenic 25.0%
! TATATTCGTCAACTTTCTAT+TGG - chr2_4:63589287-63589306 Msa0341720:intron 25.0%
!!! TAAGTAGAGCTCTAAAAAAT+TGG - chr2_4:63589332-63589351 Msa0341720:intron 25.0%
!!! TGAAAATATTGATAATGGAC+TGG + chr2_4:63589488-63589507 None:intergenic 25.0%
! AAACTTATTAAAAAAGGGGT+TGG - chr2_4:63589565-63589584 Msa0341720:intron 25.0%
! AACTTATTAAAAAAGGGGTT+GGG - chr2_4:63589566-63589585 Msa0341720:intron 25.0%
!! ATGCTATGATAATTTTTACG+AGG - chr2_4:63590197-63590216 Msa0341720:intron 25.0%
!! TGCTATGATAATTTTTACGA+GGG - chr2_4:63590198-63590217 Msa0341720:intron 25.0%
! AGTTATGTATAAGAGTTATG+CGG - chr2_4:63590381-63590400 Msa0341720:intron 25.0%
! TAGATTAGAGTTAATCTAGT+TGG - chr2_4:63590448-63590467 Msa0341720:intron 25.0%
!!! TTGAGCTCAACTTTTTTTTT+AGG + chr2_4:63590578-63590597 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG - chr2_4:63590749-63590768 Msa0341720:intron 25.0%
!! TTTTTGCTAAATGTGTGATA+TGG + chr2_4:63590893-63590912 None:intergenic 25.0%
!! GATTTTTCGTTATATGAAAC+TGG - chr2_4:63591062-63591081 Msa0341720:intron 25.0%
! AAAGGAAAAATATTAAGGGT+TGG - chr2_4:63591190-63591209 Msa0341720:intron 25.0%
!! ATGTCTTTTCTTCTATATGA+TGG + chr2_4:63591265-63591284 None:intergenic 25.0%
! CATATAGAAGAAAAGACATT+TGG - chr2_4:63591266-63591285 Msa0341720:intron 25.0%
! ATAATAATCAAGTAACCACA+TGG + chr2_4:63591845-63591864 None:intergenic 25.0%
! TTTGGTTATGCTTATAAGTA+TGG + chr2_4:63592242-63592261 None:intergenic 25.0%
! TACAAAAACTGTGAAATCTA+TGG - chr2_4:63592464-63592483 Msa0341720:intron 25.0%
! ACATAAGTAACTTTATCAGT+GGG + chr2_4:63592785-63592804 None:intergenic 25.0%
! AACATAAGTAACTTTATCAG+TGG + chr2_4:63592786-63592805 None:intergenic 25.0%
!! TATGTTGAGTTTGAGAATTT+TGG - chr2_4:63592800-63592819 Msa0341720:CDS 25.0%
AATATTATCGTATCCAAGGA+TGG - chr2_4:63588264-63588283 Msa0341720:CDS 30.0%
ATATTATCGTATCCAAGGAT+GGG - chr2_4:63588265-63588284 Msa0341720:CDS 30.0%
TAACGTAAGGAAATTACCTA+TGG + chr2_4:63588481-63588500 None:intergenic 30.0%
! TTGTGTCTCTTTTCTATTGT+GGG + chr2_4:63588735-63588754 None:intergenic 30.0%
! TTTGTGTCTCTTTTCTATTG+TGG + chr2_4:63588736-63588755 None:intergenic 30.0%
! GTGGTTTGTAATAAACTCAT+TGG + chr2_4:63588772-63588791 None:intergenic 30.0%
!! TTCGAGAGAGTTAATTTGTT+GGG + chr2_4:63588861-63588880 None:intergenic 30.0%
! CATTTTAGGCAAGATATAAG+TGG - chr2_4:63588944-63588963 Msa0341720:intron 30.0%
ATGTGTATTTCTCTCATGAA+TGG - chr2_4:63588993-63589012 Msa0341720:intron 30.0%
CAATTTCTCAAAAGAAATGG+AGG + chr2_4:63589022-63589041 None:intergenic 30.0%
CAATTTCTCAAAAGAAATGG+AGG + chr2_4:63589022-63589041 None:intergenic 30.0%
!!! CTTTTTTATATGGGCCAAAT+GGG + chr2_4:63589433-63589452 None:intergenic 30.0%
CATTTGGCCCATATAAAAAA+GGG - chr2_4:63589432-63589451 Msa0341720:intron 30.0%
!! TGGAAATATTGATAATGGAC+TGG + chr2_4:63589617-63589636 None:intergenic 30.0%
TATTGCTATAGGTGTCAAAT+GGG + chr2_4:63590088-63590107 None:intergenic 30.0%
TTATTGCTATAGGTGTCAAA+TGG + chr2_4:63590089-63590108 None:intergenic 30.0%
AGTTAGTGACTTATTGCTAT+AGG + chr2_4:63590099-63590118 None:intergenic 30.0%
GTTATGTATAAGAGTTATGC+GGG - chr2_4:63590382-63590401 Msa0341720:intron 30.0%
CATTCATTTAATGATGCACA+TGG + chr2_4:63590788-63590807 None:intergenic 30.0%
!! TTCACTTTTCTAAATCAAGC+TGG + chr2_4:63590925-63590944 None:intergenic 30.0%
TGTTACAAAATCCAAAGCTT+TGG - chr2_4:63590954-63590973 Msa0341720:intron 30.0%
TACATGTGAGTCCAATATAT+TGG - chr2_4:63590995-63591014 Msa0341720:intron 30.0%
!! TTAGTCTTGGTTTATCAACA+AGG + chr2_4:63591160-63591179 None:intergenic 30.0%
GAAAAATATTAAGGGTTGGA+GGG - chr2_4:63591194-63591213 Msa0341720:intron 30.0%
AAAAATATTAAGGGTTGGAG+GGG - chr2_4:63591195-63591214 Msa0341720:intron 30.0%
!! CACTTGTTTTCTACATTTTG+GGG + chr2_4:63591323-63591342 None:intergenic 30.0%
!! GCACTTGTTTTCTACATTTT+GGG + chr2_4:63591324-63591343 None:intergenic 30.0%
!! TGCACTTGTTTTCTACATTT+TGG + chr2_4:63591325-63591344 None:intergenic 30.0%
TAGGTTAAGTATCACATCTA+AGG + chr2_4:63591363-63591382 None:intergenic 30.0%
! AATTCGGTTATAGTTTTCCT+TGG + chr2_4:63591422-63591441 None:intergenic 30.0%
AAGGAAAACTATAACCGAAT+TGG - chr2_4:63591421-63591440 Msa0341720:intron 30.0%
AGGAAAACTATAACCGAATT+GGG - chr2_4:63591422-63591441 Msa0341720:intron 30.0%
TTTGTTGGATCAATCAAGAT+TGG + chr2_4:63591768-63591787 None:intergenic 30.0%
TTACATAACTACGTTACTGT+TGG - chr2_4:63592005-63592024 Msa0341720:intron 30.0%
!! ATTTACCAAAAGAAGCATTG+TGG - chr2_4:63592124-63592143 Msa0341720:intron 30.0%
! GTTTTTGTAGAATTGTCTAC+CGG + chr2_4:63592453-63592472 None:intergenic 30.0%
GAAAGTCCATATGAAAAAAC+AGG - chr2_4:63592587-63592606 Msa0341720:intron 30.0%
!!! GTGAAACCTGTTTTTTCATA+TGG + chr2_4:63592596-63592615 None:intergenic 30.0%
CATTGGAACACAATGCTTTA+AGG + chr2_4:63588236-63588255 None:intergenic 35.0%
!! CTTAAAGCATTGTGTTCCAA+TGG - chr2_4:63588234-63588253 Msa0341720:CDS 35.0%
AGTGGAGATTATACAAGTGT+GGG - chr2_4:63588288-63588307 Msa0341720:CDS 35.0%
AATATTAAGCTCCTAGGTCA+TGG - chr2_4:63588414-63588433 Msa0341720:CDS 35.0%
! ATACTTGTTGCTCACCAAAA+TGG - chr2_4:63588450-63588469 Msa0341720:CDS 35.0%
!! AAGAACTAAAAGGTAACGGA+AGG + chr2_4:63588604-63588623 None:intergenic 35.0%
GTTATGTTATGCTCCTTCAA+AGG + chr2_4:63588824-63588843 None:intergenic 35.0%
!! TAATTTGTTGGGAACGCTAT+GGG + chr2_4:63588850-63588869 None:intergenic 35.0%
!! TTAATTTGTTGGGAACGCTA+TGG + chr2_4:63588851-63588870 None:intergenic 35.0%
!! GTTCGAGAGAGTTAATTTGT+TGG + chr2_4:63588862-63588881 None:intergenic 35.0%
TTGGACATGATCTTATACCT+AGG - chr2_4:63589306-63589325 Msa0341720:intron 35.0%
!!! GCATTTGGGCTAGTTTTTTT+CGG + chr2_4:63589388-63589407 None:intergenic 35.0%
!!! CCTTTTTTATATGGGCCAAA+TGG + chr2_4:63589434-63589453 None:intergenic 35.0%
CCATTTGGCCCATATAAAAA+AGG - chr2_4:63589431-63589450 Msa0341720:intron 35.0%
TATTAAAAAAGGGGTTGGGT+CGG - chr2_4:63589570-63589589 Msa0341720:intron 35.0%
! CTTGTGTTGCAAACCTTTTA+AGG - chr2_4:63590117-63590136 Msa0341720:intron 35.0%
TATTTATTTGAGGGATGTCG+TGG + chr2_4:63590154-63590173 None:intergenic 35.0%
! TATCACGAAGTATTTCCGTT+TGG - chr2_4:63590478-63590497 Msa0341720:intron 35.0%
!!! ATTTCCGTTTGGCTTTTTTC+TGG - chr2_4:63590489-63590508 Msa0341720:intron 35.0%
!!! TTTCCGTTTGGCTTTTTTCT+GGG - chr2_4:63590490-63590509 Msa0341720:intron 35.0%
GAAAGAGATACAAAGACTGA+GGG + chr2_4:63590529-63590548 None:intergenic 35.0%
AGAAAGAGATACAAAGACTG+AGG + chr2_4:63590530-63590549 None:intergenic 35.0%
TGCTTATATTAGTGACCAGA+GGG + chr2_4:63590710-63590729 None:intergenic 35.0%
TTGCTTATATTAGTGACCAG+AGG + chr2_4:63590711-63590730 None:intergenic 35.0%
! CTATTTCTCATCCAAAGCTT+TGG + chr2_4:63590968-63590987 None:intergenic 35.0%
GGAAAAATATTAAGGGTTGG+AGG - chr2_4:63591193-63591212 Msa0341720:intron 35.0%
! GTTATAGTTTTCCTTGGAGT+AGG + chr2_4:63591416-63591435 None:intergenic 35.0%
!! CATTCGGGATATTGTTTTGT+TGG + chr2_4:63591783-63591802 None:intergenic 35.0%
TAGTGAAAACATGATCCATG+TGG - chr2_4:63591827-63591846 Msa0341720:intron 35.0%
CTAATTAATTCACTGCAGCT+AGG + chr2_4:63591886-63591905 None:intergenic 35.0%
! TATAGCCACAATGCTTCTTT+TGG + chr2_4:63592132-63592151 None:intergenic 35.0%
!! AAAGAAGCATTGTGGCTATA+AGG - chr2_4:63592132-63592151 Msa0341720:intron 35.0%
AAGCATAACCAAACTCTGAT+TGG - chr2_4:63592249-63592268 Msa0341720:intron 35.0%
ACATGGTGAATTTACAACGT+TGG + chr2_4:63592622-63592641 None:intergenic 35.0%
GCATTGTTTCATAGATTCCA+TGG - chr2_4:63592724-63592743 Msa0341720:CDS 35.0%
GAGTGGAGATTATACAAGTG+TGG - chr2_4:63588287-63588306 Msa0341720:CDS 40.0%
AAACGTGAACGATGTAAGGT+TGG + chr2_4:63588347-63588366 None:intergenic 40.0%
GCTAAAACGTGAACGATGTA+AGG + chr2_4:63588351-63588370 None:intergenic 40.0%
!! TACATCGTTCACGTTTTAGC+AGG - chr2_4:63588351-63588370 Msa0341720:CDS 40.0%
!! TACCTATGGTGGAACCATTT+TGG + chr2_4:63588467-63588486 None:intergenic 40.0%
CGTAAGGAAATTACCTATGG+TGG + chr2_4:63588478-63588497 None:intergenic 40.0%
AACCACTCATAGAACATGCA+TGG - chr2_4:63588786-63588805 Msa0341720:CDS 40.0%
GAGAACACTATCACCTTTGA+AGG - chr2_4:63588808-63588827 Msa0341720:CDS 40.0%
AAATGAGTATACACGCCCAT+CGG - chr2_4:63588917-63588936 Msa0341720:intron 40.0%
TGCCTAAAATGATGACCGAT+GGG + chr2_4:63588935-63588954 None:intergenic 40.0%
TTGCCTAAAATGATGACCGA+TGG + chr2_4:63588936-63588955 None:intergenic 40.0%
!! GAAGATTGGTTTGTTTCACG+TGG + chr2_4:63589154-63589173 None:intergenic 40.0%
TCTCTCTACATGGTTTAGGT+AGG + chr2_4:63589247-63589266 None:intergenic 40.0%
TACCTAAACCATGTAGAGAG+AGG - chr2_4:63589246-63589265 Msa0341720:intron 40.0%
ACCTAAACCATGTAGAGAGA+GGG - chr2_4:63589247-63589266 Msa0341720:intron 40.0%
! CAAAATATGGGCTAATGGGT+CGG + chr2_4:63589358-63589377 None:intergenic 40.0%
! GACCCATTAGCCCATATTTT+GGG - chr2_4:63589357-63589376 Msa0341720:intron 40.0%
! GACCCAAAATATGGGCTAAT+GGG + chr2_4:63589362-63589381 None:intergenic 40.0%
!! CATTAGCCCATATTTTGGGT+CGG - chr2_4:63589361-63589380 Msa0341720:intron 40.0%
!! ATTAGCCCATATTTTGGGTC+GGG - chr2_4:63589362-63589381 Msa0341720:intron 40.0%
TGGCCCATATAAAAAAGGGT+TGG - chr2_4:63589436-63589455 Msa0341720:intron 40.0%
GGCCCATATAAAAAAGGGTT+GGG - chr2_4:63589437-63589456 Msa0341720:intron 40.0%
!!! GGCCCAACCCTTTTTTATAT+GGG + chr2_4:63589442-63589461 None:intergenic 40.0%
CATATAAAAAAGGGTTGGGC+CGG - chr2_4:63589441-63589460 Msa0341720:intron 40.0%
AAAAATAAAACGGGTCGTGC+CGG - chr2_4:63589944-63589963 Msa0341720:intron 40.0%
!! CAAACCTTTTAAGGAGCCAA+AGG - chr2_4:63590126-63590145 Msa0341720:intron 40.0%
AATTATCATAGCATCGTCGC+TGG + chr2_4:63590191-63590210 None:intergenic 40.0%
TGACCCAGAAAAAAGCCAAA+CGG + chr2_4:63590496-63590515 None:intergenic 40.0%
!!! CCTTTTAAGTTGCTGCATAC+AGG + chr2_4:63591228-63591247 None:intergenic 40.0%
CCTGTATGCAGCAACTTAAA+AGG - chr2_4:63591225-63591244 Msa0341720:intron 40.0%
ATGCAGCAACTTAAAAGGAG+TGG - chr2_4:63591230-63591249 Msa0341720:intron 40.0%
!!! TTTTCTACATTTTGGGGTGC+GGG + chr2_4:63591317-63591336 None:intergenic 40.0%
!!! GTTTTCTACATTTTGGGGTG+CGG + chr2_4:63591318-63591337 None:intergenic 40.0%
ATATTTGGCAACCTACTCCA+AGG - chr2_4:63591402-63591421 Msa0341720:intron 40.0%
TCCAGATGTAAGACCCAATT+CGG + chr2_4:63591438-63591457 None:intergenic 40.0%
CTGGAAAAATCTTGCCTAGT+AGG - chr2_4:63591453-63591472 Msa0341720:intron 40.0%
CAGCTATAAGGTGATCACTT+TGG + chr2_4:63591577-63591596 None:intergenic 40.0%
TCCAATTAGATGCATGTGGT+TGG - chr2_4:63591607-63591626 Msa0341720:intron 40.0%
TCCAACCACATGCATCTAAT+TGG + chr2_4:63591611-63591630 None:intergenic 40.0%
TTCCACACAATCACACATTC+GGG + chr2_4:63591798-63591817 None:intergenic 40.0%
CTTCCACACAATCACACATT+CGG + chr2_4:63591799-63591818 None:intergenic 40.0%
CTTTCCCCATGACAAAAAGA+AGG - chr2_4:63592194-63592213 Msa0341720:intron 40.0%
! ACCTCCTTCTTTTTGTCATG+GGG + chr2_4:63592201-63592220 None:intergenic 40.0%
! CACCTCCTTCTTTTTGTCAT+GGG + chr2_4:63592202-63592221 None:intergenic 40.0%
CATTGGATTTGTGAACACAG+CGG - chr2_4:63592325-63592344 Msa0341720:intron 40.0%
! TTTTTCCAATGCTCCATCCA+AGG - chr2_4:63592401-63592420 Msa0341720:intron 40.0%
! ATAAGGTGTCTTGGAATCCT+TGG + chr2_4:63592421-63592440 None:intergenic 40.0%
AAGGATTCCAAGACACCTTA+TGG - chr2_4:63592420-63592439 Msa0341720:intron 40.0%
AGGATTCCAAGACACCTTAT+GGG - chr2_4:63592421-63592440 Msa0341720:intron 40.0%
CATGCAGTCTTGAAATACAG+CGG + chr2_4:63592519-63592538 None:intergenic 40.0%
GACTTTCTGTTCTCATCTTC+AGG + chr2_4:63592647-63592666 None:intergenic 40.0%
AGATGAGAACAGAAAGTCAG+AGG - chr2_4:63592649-63592668 Msa0341720:intron 40.0%
! GAGTTTGAGAATTTTGGACC+TGG - chr2_4:63592806-63592825 Msa0341720:CDS 40.0%
ATCTAACACTGATGGTAGAG+TGG - chr2_4:63592829-63592848 Msa0341720:CDS 40.0%
!! TGAAAGGGAGTGCTTTGTTT+GGG + chr2_4:63592883-63592902 None:intergenic 40.0%
AGAGATAGGAAGCAGTGAAA+GGG + chr2_4:63592898-63592917 None:intergenic 40.0%
AAGAGATAGGAAGCAGTGAA+AGG + chr2_4:63592899-63592918 None:intergenic 40.0%
TTTCACTGCTTCCTATCTCT+TGG - chr2_4:63592898-63592917 Msa0341720:CDS 40.0%
AGAATCAGCATCCAAGAGAT+AGG + chr2_4:63592912-63592931 None:intergenic 40.0%
!! ATCTCTTGGATGCTGATTCT+TGG - chr2_4:63592912-63592931 Msa0341720:CDS 40.0%
ATAATCTCCACTCCCATCCT+TGG + chr2_4:63588280-63588299 None:intergenic 45.0%
CTATCAGAAATGCCCCTGAT+TGG - chr2_4:63588316-63588335 Msa0341720:CDS 45.0%
!! AAGGTTGGTGACTCCAATCA+GGG + chr2_4:63588332-63588351 None:intergenic 45.0%
!! TAAGGTTGGTGACTCCAATC+AGG + chr2_4:63588333-63588352 None:intergenic 45.0%
TGTGGTTTGAACCATGACCT+AGG + chr2_4:63588428-63588447 None:intergenic 45.0%
! GGTGAGCAACAAGTATTGTG+TGG + chr2_4:63588446-63588465 None:intergenic 45.0%
CACCAAAATGGTTCCACCAT+AGG - chr2_4:63588462-63588481 Msa0341720:CDS 45.0%
CTCCATGCATGTTCTATGAG+TGG + chr2_4:63588791-63588810 None:intergenic 45.0%
CTCAACCTACCTAAACCATG+TGG - chr2_4:63589049-63589068 Msa0341720:intron 45.0%
TCTCTCCACATGGTTTAGGT+AGG + chr2_4:63589057-63589076 None:intergenic 45.0%
TACCTAAACCATGTGGAGAG+AGG - chr2_4:63589056-63589075 Msa0341720:intron 45.0%
ACCTAAACCATGTGGAGAGA+GGG - chr2_4:63589057-63589076 Msa0341720:intron 45.0%
TCCCTCTCTCTACATGGTTT+AGG + chr2_4:63589251-63589270 None:intergenic 45.0%
TAGAGCTCTACTTACTGCCT+AGG + chr2_4:63589326-63589345 None:intergenic 45.0%
! CGACCCATTAGCCCATATTT+TGG - chr2_4:63589356-63589375 Msa0341720:intron 45.0%
! CGACCCAAAATATGGGCTAA+TGG + chr2_4:63589363-63589382 None:intergenic 45.0%
AAAACTAGCCCAAATGCGCT+CGG - chr2_4:63589391-63589410 Msa0341720:intron 45.0%
AAAAAAGCCCGAGCGCATTT+GGG + chr2_4:63589402-63589421 None:intergenic 45.0%
!!! TTTTTTGGCCCAAGCCCATT+TGG - chr2_4:63589416-63589435 Msa0341720:intron 45.0%
! TATATGGGCCAAATGGGCTT+GGG + chr2_4:63589427-63589446 None:intergenic 45.0%
! TTATATGGGCCAAATGGGCT+TGG + chr2_4:63589428-63589447 None:intergenic 45.0%
!!! CGGCCCAACCCTTTTTTATA+TGG + chr2_4:63589443-63589462 None:intergenic 45.0%
AAAATAAAACGGGTCGTGCC+GGG - chr2_4:63589945-63589964 Msa0341720:intron 45.0%
ATCTGCGGCCCAATTATAAC+AGG - chr2_4:63590006-63590025 Msa0341720:intron 45.0%
TCTGCGGCCCAATTATAACA+GGG - chr2_4:63590007-63590026 Msa0341720:intron 45.0%
GAGTAGCTAAATACACCCTC+TGG - chr2_4:63590692-63590711 Msa0341720:intron 45.0%
AGCAACTTAAAAGGAGTGGC+AGG - chr2_4:63591234-63591253 Msa0341720:intron 45.0%
!!! TTTCTACATTTTGGGGTGCG+GGG + chr2_4:63591316-63591335 None:intergenic 45.0%
ACCGAATTGGGTCTTACATC+TGG - chr2_4:63591434-63591453 Msa0341720:intron 45.0%
! GTTTTGCAAGTGTGCCTACT+AGG + chr2_4:63591470-63591489 None:intergenic 45.0%
ATGCATCTAATTGGACCAGG+TGG + chr2_4:63591602-63591621 None:intergenic 45.0%
CACATGCATCTAATTGGACC+AGG + chr2_4:63591605-63591624 None:intergenic 45.0%
CTGGTCCAATTAGATGCATG+TGG - chr2_4:63591603-63591622 Msa0341720:intron 45.0%
ATCCCGAATGTGTGATTGTG+TGG - chr2_4:63591793-63591812 Msa0341720:intron 45.0%
CGAATGTGTGATTGTGTGGA+AGG - chr2_4:63591797-63591816 Msa0341720:intron 45.0%
TGTGTGATTGTGTGGAAGGT+TGG - chr2_4:63591801-63591820 Msa0341720:intron 45.0%
TGGTATAACTCTAGCGTGGA+GGG + chr2_4:63592036-63592055 None:intergenic 45.0%
! GTTATACCACACGCTAGTCT+TGG - chr2_4:63592047-63592066 Msa0341720:intron 45.0%
TCCCCATGACAAAAAGAAGG+AGG - chr2_4:63592197-63592216 Msa0341720:intron 45.0%
! CCACCTCCTTCTTTTTGTCA+TGG + chr2_4:63592203-63592222 None:intergenic 45.0%
CCATGACAAAAAGAAGGAGG+TGG - chr2_4:63592200-63592219 Msa0341720:intron 45.0%
CACAGTCTCCAATCAGAGTT+TGG + chr2_4:63592260-63592279 None:intergenic 45.0%
GGGTTCATGGCTCAAAACAT+TGG - chr2_4:63592308-63592327 Msa0341720:intron 45.0%
! AAACAGCCCATAAGGTGTCT+TGG + chr2_4:63592430-63592449 None:intergenic 45.0%
CGCTGTATTTCAAGACTGCA+TGG - chr2_4:63592517-63592536 Msa0341720:intron 45.0%
GTTCTCATCTTCAGGTGACA+TGG + chr2_4:63592639-63592658 None:intergenic 45.0%
! TCAGAGGTGCATGCAACATT+AGG - chr2_4:63592665-63592684 Msa0341720:intron 45.0%
ATGCAACATTAGGTCGTCCT+TGG - chr2_4:63592675-63592694 Msa0341720:intron 45.0%
AACATTAGGTCGTCCTTGGA+GGG - chr2_4:63592679-63592698 Msa0341720:intron 45.0%
ACTGTAGAATATGCCCTCCA+AGG + chr2_4:63592695-63592714 None:intergenic 45.0%
! TTGGAGGGCATATTCTACAG+TGG - chr2_4:63592694-63592713 Msa0341720:CDS 45.0%
GATTCCATGGTTGATCCTAG+AGG - chr2_4:63592737-63592756 Msa0341720:CDS 45.0%
CATGGTTGATCCTAGAGGTT+GGG - chr2_4:63592742-63592761 Msa0341720:CDS 45.0%
TTGATCCTAGAGGTTGGGAA+GGG - chr2_4:63592747-63592766 Msa0341720:CDS 45.0%
CTACCATCAGTGTTAGATCC+AGG + chr2_4:63592827-63592846 None:intergenic 45.0%
ACACTGATGGTAGAGTGGAT+TGG - chr2_4:63592834-63592853 Msa0341720:CDS 45.0%
TTGCCAAGAACTGTAACACC+AGG + chr2_4:63592860-63592879 None:intergenic 45.0%
!! GTGAAAGGGAGTGCTTTGTT+TGG + chr2_4:63592884-63592903 None:intergenic 45.0%
GATTCTTGGATTCCCTCTAC+AGG - chr2_4:63592926-63592945 Msa0341720:CDS 45.0%
TGATAGGGAACACCTGTAGA+GGG + chr2_4:63592941-63592960 None:intergenic 45.0%
ATGATAGGGAACACCTGTAG+AGG + chr2_4:63592942-63592961 None:intergenic 45.0%
!! AAATTAATATAAATTGATAA+TGG - chr2_4:63588686-63588705 Msa0341720:CDS 5.0%
!!! AATTTAAAACTTATTAAAAA+AGG - chr2_4:63589559-63589578 Msa0341720:intron 5.0%
!!! ATTTAAAACTTATTAAAAAA+GGG - chr2_4:63589560-63589579 Msa0341720:intron 5.0%
!! AATATATAAAAATACATAAA+AGG - chr2_4:63589906-63589925 Msa0341720:intron 5.0%
!!! TAAATTTTAAAAAATAAAAC+GGG - chr2_4:63589935-63589954 Msa0341720:intron 5.0%
!! TAAAAACTATATATATATAT+TGG - chr2_4:63590854-63590873 Msa0341720:intron 5.0%
!! ATCTTAAATAAAAAATATTT+CGG + chr2_4:63591546-63591565 None:intergenic 5.0%
!! TAAAAATGTATTATAAAATA+TGG + chr2_4:63592076-63592095 None:intergenic 5.0%
TGCAGCAGCAGTGTTAGTGT+TGG - chr2_4:63588200-63588219 Msa0341720:CDS 50.0%
ATCGTATCCAAGGATGGGAG+TGG - chr2_4:63588270-63588289 Msa0341720:CDS 50.0%
!! AGGTTGGTGACTCCAATCAG+GGG + chr2_4:63588331-63588350 None:intergenic 50.0%
TCTCGTCCAATCCTACTGTG+GGG + chr2_4:63588884-63588903 None:intergenic 50.0%
CTCTCGTCCAATCCTACTGT+GGG + chr2_4:63588885-63588904 None:intergenic 50.0%
! CGCCCATCGGTCATCATTTT+AGG - chr2_4:63588930-63588949 Msa0341720:intron 50.0%
TCCCTCTCTCCACATGGTTT+AGG + chr2_4:63589061-63589080 None:intergenic 50.0%
TTCGGCCCGACCCAAAATAT+GGG + chr2_4:63589370-63589389 None:intergenic 50.0%
TTTCGGCCCGACCCAAAATA+TGG + chr2_4:63589371-63589390 None:intergenic 50.0%
AAACTAGCCCAAATGCGCTC+GGG - chr2_4:63589392-63589411 Msa0341720:intron 50.0%
CAAAAAAGCCCGAGCGCATT+TGG + chr2_4:63589403-63589422 None:intergenic 50.0%
!!! CAAATGCGCTCGGGCTTTTT+TGG - chr2_4:63589401-63589420 Msa0341720:intron 50.0%
GGGCCAGCCCTGTTATAATT+GGG + chr2_4:63590017-63590036 None:intergenic 50.0%
TGGGCCAGCCCTGTTATAAT+TGG + chr2_4:63590018-63590037 None:intergenic 50.0%
AGAGGCCCGACTGCATAAAT+GGG + chr2_4:63590037-63590056 None:intergenic 50.0%
ATTTATGCAGTCGGGCCTCT+CGG - chr2_4:63590037-63590056 Msa0341720:intron 50.0%
!! AGGTGTCAAATGGGTTGACC+CGG + chr2_4:63590079-63590098 None:intergenic 50.0%
! GGCACCTTTGGCTCCTTAAA+AGG + chr2_4:63590133-63590152 None:intergenic 50.0%
TAAGAGTTATGCGGGTTCGC+TGG - chr2_4:63590390-63590409 Msa0341720:intron 50.0%
AAGAGTTATGCGGGTTCGCT+GGG - chr2_4:63590391-63590410 Msa0341720:intron 50.0%
GTGGTATAACTCTAGCGTGG+AGG + chr2_4:63592037-63592056 None:intergenic 50.0%
CGTGTGGTATAACTCTAGCG+TGG + chr2_4:63592040-63592059 None:intergenic 50.0%
TGGATTCCAAGACTAGCGTG+TGG + chr2_4:63592056-63592075 None:intergenic 50.0%
GTGAATCGTGCAGACATTCG+TGG - chr2_4:63592281-63592300 Msa0341720:intron 50.0%
GTGCAGACATTCGTGGAGAA+GGG - chr2_4:63592288-63592307 Msa0341720:intron 50.0%
CATTCGTGGAGAAGGGTTCA+TGG - chr2_4:63592295-63592314 Msa0341720:intron 50.0%
GGAATCCTTGGATGGAGCAT+TGG + chr2_4:63592409-63592428 None:intergenic 50.0%
GGTGTCTTGGAATCCTTGGA+TGG + chr2_4:63592417-63592436 None:intergenic 50.0%
! GACACCTTATGGGCTGTTTC+CGG - chr2_4:63592431-63592450 Msa0341720:intron 50.0%
TCTACCGGAAACAGCCCATA+AGG + chr2_4:63592438-63592457 None:intergenic 50.0%
!! GGCACTGTCGACTTCATCTA+CGG - chr2_4:63592485-63592504 Msa0341720:intron 50.0%
TGGACTTTCACGTGACTGTG+CGG + chr2_4:63592576-63592595 None:intergenic 50.0%
CAACATTAGGTCGTCCTTGG+AGG - chr2_4:63592678-63592697 Msa0341720:intron 50.0%
!! CCAACCTCTAGGATCAACCA+TGG + chr2_4:63592744-63592763 None:intergenic 50.0%
CCATGGTTGATCCTAGAGGT+TGG - chr2_4:63592741-63592760 Msa0341720:CDS 50.0%
GTTGATCCTAGAGGTTGGGA+AGG - chr2_4:63592746-63592765 Msa0341720:CDS 50.0%
GGACCTGGATCTAACACTGA+TGG - chr2_4:63592821-63592840 Msa0341720:CDS 50.0%
!! TGGCCTGGTGTTACAGTTCT+TGG - chr2_4:63592854-63592873 Msa0341720:CDS 50.0%
ACTCTCTCGAACCCCACAGT+AGG - chr2_4:63588870-63588889 Msa0341720:intron 55.0%
CTCGAACCCCACAGTAGGAT+TGG - chr2_4:63588875-63588894 Msa0341720:intron 55.0%
GCTCTCGTCCAATCCTACTG+TGG + chr2_4:63588886-63588905 None:intergenic 55.0%
CCTGCATCCCTCTCTCTACA+TGG + chr2_4:63589257-63589276 None:intergenic 55.0%
CCATGTAGAGAGAGGGATGC+AGG - chr2_4:63589254-63589273 Msa0341720:intron 55.0%
AAAAAAGGGTTGGGCCGGAC+TGG - chr2_4:63589446-63589465 Msa0341720:intron 55.0%
CAATGCTCGATCAGCCAGTC+CGG + chr2_4:63589463-63589482 None:intergenic 55.0%
!! GGACTGGCTGATCGAGCATT+GGG - chr2_4:63589462-63589481 Msa0341720:intron 55.0%
AAAAAGGGGTTGGGTCGGAC+CGG - chr2_4:63589575-63589594 Msa0341720:intron 55.0%
! GGACCGGATCATCGGGTTTT+GGG - chr2_4:63589591-63589610 Msa0341720:intron 55.0%
TGGCCCAAAACCCGATGATC+CGG + chr2_4:63589597-63589616 None:intergenic 55.0%
AGGTCGGGCTCAAGAATCTG+CGG - chr2_4:63589991-63590010 Msa0341720:intron 55.0%
CGGCCCAATTATAACAGGGC+TGG - chr2_4:63590011-63590030 Msa0341720:intron 55.0%
! GGCTGGCCCATTTATGCAGT+CGG - chr2_4:63590028-63590047 Msa0341720:intron 55.0%
GCTGGCCCATTTATGCAGTC+GGG - chr2_4:63590029-63590048 Msa0341720:intron 55.0%
GAGAGGCCCGACTGCATAAA+TGG + chr2_4:63590038-63590057 None:intergenic 55.0%
TTTATGCAGTCGGGCCTCTC+GGG - chr2_4:63590038-63590057 Msa0341720:intron 55.0%
TAGCATCGTCGCTGGTACCA+AGG + chr2_4:63590183-63590202 None:intergenic 55.0%
CACCTTATAGCTGTGCCACC+TGG - chr2_4:63591584-63591603 Msa0341720:intron 55.0%
GACCAGGTGGCACAGCTATA+AGG + chr2_4:63591589-63591608 None:intergenic 55.0%
CGTGCAGACATTCGTGGAGA+AGG - chr2_4:63592287-63592306 Msa0341720:intron 55.0%
TGCAGTGGCTGTTCGAAACG+AGG - chr2_4:63592364-63592383 Msa0341720:intron 55.0%
GACATCCCTTCCCAACCTCT+AGG + chr2_4:63592755-63592774 None:intergenic 55.0%
AGAGGTTGGGAAGGGATGTC+TGG - chr2_4:63592755-63592774 Msa0341720:CDS 55.0%
!! GATGGTAGAGTGGATTGGCC+TGG - chr2_4:63592839-63592858 Msa0341720:CDS 55.0%
CCTGCATCCCTCTCTCCACA+TGG + chr2_4:63589067-63589086 None:intergenic 60.0%
CCATGTGGAGAGAGGGATGC+AGG - chr2_4:63589064-63589083 Msa0341720:intron 60.0%
!! CGGACTGGCTGATCGAGCAT+TGG - chr2_4:63589461-63589480 Msa0341720:intron 60.0%
GTTGGGTCGGACCGGATCAT+CGG - chr2_4:63589583-63589602 Msa0341720:intron 60.0%
TTGGGTCGGACCGGATCATC+GGG - chr2_4:63589584-63589603 Msa0341720:intron 60.0%
! CGGACCGGATCATCGGGTTT+TGG - chr2_4:63589590-63589609 Msa0341720:intron 60.0%
GCAGATTCTTGAGCCCGACC+TGG + chr2_4:63589992-63590011 None:intergenic 60.0%
GAGGGATGTCGTGGCACCTT+TGG + chr2_4:63590145-63590164 None:intergenic 60.0%
! GCTAGATGCAAGCGCTGCAG+TGG - chr2_4:63592349-63592368 Msa0341720:intron 60.0%
TAAAACGGGTCGTGCCGGGC+TGG - chr2_4:63589949-63589968 Msa0341720:intron 65.0%
ACCTGGCCTGTGTGGGCCAT+GGG + chr2_4:63589975-63589994 None:intergenic 65.0%
ATGGCCCACACAGGCCAGGT+CGG - chr2_4:63589975-63589994 Msa0341720:intron 65.0%
GACCTGGCCTGTGTGGGCCA+TGG + chr2_4:63589976-63589995 None:intergenic 70.0%
TGGCCCACACAGGCCAGGTC+GGG - chr2_4:63589976-63589995 Msa0341720:intron 70.0%
GAGCCCGACCTGGCCTGTGT+GGG + chr2_4:63589982-63590001 None:intergenic 70.0%
TGAGCCCGACCTGGCCTGTG+TGG + chr2_4:63589983-63590002 None:intergenic 70.0%
TGACCCGGTCTAGCCCGACC+TGG + chr2_4:63590064-63590083 None:intergenic 70.0%
GTGTGGGCCATGGGCCAGCC+CGG + chr2_4:63589966-63589985 None:intergenic 75.0%
! GGCTGGCCCATGGCCCACAC+AGG - chr2_4:63589966-63589985 Msa0341720:intron 75.0%
GCCCATGGCCCACACAGGCC+AGG - chr2_4:63589971-63589990 Msa0341720:intron 75.0%
TCGGGCCTCTCGGGCCAGGT+CGG - chr2_4:63590047-63590066 Msa0341720:intron 75.0%
CTAGCCCGACCTGGCCCGAG+AGG + chr2_4:63590055-63590074 None:intergenic 75.0%
! CGGGCCAGGTCGGGCTAGAC+CGG - chr2_4:63590057-63590076 Msa0341720:intron 75.0%
! GGGCCAGGTCGGGCTAGACC+GGG - chr2_4:63590058-63590077 Msa0341720:intron 75.0%
!!! GGTCGTGCCGGGCTGGCCCA+TGG - chr2_4:63589956-63589975 Msa0341720:intron 80.0%
! GCAGTCGGGCCTCTCGGGCC+AGG - chr2_4:63590043-63590062 Msa0341720:intron 80.0%
! CGGGCCTCTCGGGCCAGGTC+GGG - chr2_4:63590048-63590067 Msa0341720:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 63588195 63592973 63588195 ID=Msa0341720;Name=Msa0341720
chr2_4 mRNA 63588195 63592973 63588195 ID=Msa0341720-mRNA-1;Parent=Msa0341720;Name=Msa0341720-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|322
chr2_4 exon 63592685 63592973 63592685 ID=Msa0341720-mRNA-1:exon:20338;Parent=Msa0341720-mRNA-1
chr2_4 exon 63588195 63588874 63588195 ID=Msa0341720-mRNA-1:exon:20337;Parent=Msa0341720-mRNA-1
chr2_4 CDS 63592685 63592973 63592685 ID=Msa0341720-mRNA-1:cds;Parent=Msa0341720-mRNA-1
chr2_4 CDS 63588195 63588874 63588195 ID=Msa0341720-mRNA-1:cds;Parent=Msa0341720-mRNA-1
Gene Sequence

>Msa0341720

ATGGATGCAGCAGCAGTGTTAGTGTTGGTGATCTTGTTCCTTAAAGCATTGTGTTCCAATGGTACAATTAATATTATCGTATCCAAGGATGGGAGTGGAGATTATACAAGTGTGGGTGAAGCTATCAGAAATGCCCCTGATTGGAGTCACCAACCTTACATCGTTCACGTTTTAGCAGGCATTTATGAAGAGTACATCTTCATTCCACCGAGTAAGATTAATATTAAGCTCCTAGGTCATGGTTCAAACCACACAATACTTGTTGCTCACCAAAATGGTTCCACCATAGACATTCGTGGAGAAGGGTTCATGGCTCAAAACATTGGATTTGTGAACACAGCGGAGCTAGATGCAAGCGCTGCAGTGGCTGTTCGAAACGAGGCAAACAACAGCATATTTTTCCAATGCTCCATCCAAGGATTCCAAGACACCTTATGGGCTGTTTCCGGTAGACAATTCTACAAAAACTGTGAAATCTATGGCACTGTCGACTTCATCTACGGCAACGCTGCCGCTGTATTTCAAGACTGCATGGTTTATGCACGCTATCGACAGTTTGTGACATTCACCGCACAGTCACGTGAAAGTCCATATGAAAAAACAGGTTTCACATTCCAACGTTGTAAATTCACCATGTCACCTGAAGATGAGAACAGAAAGTCAGAGGTGCATGCAACATTAGGTCGTCCTTGGAGGGCATATTCTACAGTGGCTATATTGCATTGTTTCATAGATTCCATGGTTGATCCTAGAGGTTGGGAAGGGATGTCTGGTCTGCCCACTGATAAAGTTACTTATGTTGAGTTTGAGAATTTTGGACCTGGATCTAACACTGATGGTAGAGTGGATTGGCCTGGTGTTACAGTTCTTGGCAACCCAAACAAAGCACTCCCTTTCACTGCTTCCTATCTCTTGGATGCTGATTCTTGGATTCCCTCTACAGGTGTTCCCTATCATAGTGAACTATAA
Protein sequence

>Msa0341720

MDAAAVLVLVILFLKALCSNGTINIIVSKDGSGDYTSVGEAIRNAPDWSHQPYIVHVLAGIYEEYIFIPPSKINIKLLGHGSNHTILVAHQNGSTIDIRGEGFMAQNIGFVNTAELDASAAVAVRNEANNSIFFQCSIQGFQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMVYARYRQFVTFTAQSRESPYEKTGFTFQRCKFTMSPEDENRKSEVHATLGRPWRAYSTVAILHCFIDSMVDPRGWEGMSGLPTDKVTYVEFENFGPGSNTDGRVDWPGVTVLGNPNKALPFTASYLLDADSWIPSTGVPYHSEL*