AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0093820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0093820 MtrunA17_Chr2g0334111 97.214 323 8 1 1 322 1 323 0.0 650
Msa0093820 MtrunA17_Chr7g0268241 76.101 318 70 4 9 322 35 350 1.40e-178 497
Msa0093820 MtrunA17_Chr7g0269541 40.867 323 178 3 13 322 234 556 4.17e-82 258
Msa0093820 MtrunA17_Chr1g0192331 41.083 314 166 6 25 320 214 526 4.13e-79 250
Msa0093820 MtrunA17_Chr3g0079341 40.000 325 178 5 15 322 203 527 3.04e-76 243
Msa0093820 MtrunA17_Chr8g0391291 37.920 327 186 5 13 322 213 539 3.67e-76 243
Msa0093820 MtrunA17_Chr7g0272141 39.938 323 172 4 13 322 229 542 3.67e-76 243
Msa0093820 MtrunA17_Chr8g0391311 38.339 313 179 4 24 322 229 541 4.76e-76 242
Msa0093820 MtrunA17_Chr3g0090091 40.127 314 173 4 24 322 215 528 2.44e-75 240
Msa0093820 MtrunA17_Chr4g0069881 40.193 311 166 5 25 318 224 531 2.82e-75 240
Msa0093820 MtrunA17_Chr3g0079361 39.809 314 174 4 24 322 214 527 8.05e-75 239
Msa0093820 MtrunA17_Chr4g0018371 39.744 312 173 4 24 320 226 537 2.67e-74 238
Msa0093820 MtrunA17_Chr3g0080381 42.173 313 158 7 25 318 316 624 4.51e-74 239
Msa0093820 MtrunA17_Chr4g0069841 37.888 322 186 4 15 322 195 516 4.68e-74 236
Msa0093820 MtrunA17_Chr1g0175661 40.506 316 167 7 25 322 246 558 1.34e-73 236
Msa0093820 MtrunA17_Chr7g0269521 40.764 314 169 5 25 322 250 562 2.23e-73 236
Msa0093820 MtrunA17_Chr3g0079351 39.077 325 181 5 15 322 203 527 2.31e-73 235
Msa0093820 MtrunA17_Chr7g0269531 39.365 315 173 5 25 322 252 565 2.34e-73 236
Msa0093820 MtrunA17_Chr4g0011771 39.871 311 173 4 24 322 205 513 3.54e-73 234
Msa0093820 MtrunA17_Chr8g0354911 41.667 312 161 6 25 318 300 608 9.99e-73 236
Msa0093820 MtrunA17_Chr1g0195301 39.677 310 170 5 29 322 247 555 1.72e-72 233
Msa0093820 MtrunA17_Chr1g0195321 39.677 310 170 5 29 322 247 555 1.72e-72 233
Msa0093820 MtrunA17_Chr7g0269511 40.446 314 170 6 25 322 252 564 4.85e-72 233
Msa0093820 MtrunA17_Chr1g0195331 39.677 310 170 5 29 322 247 555 9.10e-72 232
Msa0093820 MtrunA17_Chr7g0233831 38.854 314 177 3 24 322 242 555 2.10e-71 231
Msa0093820 MtrunA17_Chr2g0302021 34.783 322 196 4 15 322 204 525 2.87e-70 227
Msa0093820 MtrunA17_Chr4g0011791 39.871 311 170 6 24 322 204 509 3.71e-70 226
Msa0093820 MtrunA17_Chr1g0195351 39.032 310 170 6 29 322 247 553 9.56e-69 224
Msa0093820 MtrunA17_Chr8g0345281 37.662 308 179 3 24 318 278 585 4.11e-68 223
Msa0093820 MtrunA17_Chr4g0069861 36.943 314 185 3 22 322 204 517 1.67e-67 219
Msa0093820 MtrunA17_Chr3g0126771 35.783 313 187 4 24 322 285 597 4.34e-67 220
Msa0093820 MtrunA17_Chr7g0233771 37.742 310 178 3 24 318 241 550 8.33e-67 219
Msa0093820 MtrunA17_Chr3g0080391 36.218 312 181 6 24 322 268 574 1.49e-66 218
Msa0093820 MtrunA17_Chr1g0192321 34.713 314 185 6 24 320 271 581 2.62e-66 218
Msa0093820 MtrunA17_Chr4g0011751 35.962 317 183 6 19 317 170 484 2.12e-65 213
Msa0093820 MtrunA17_Chr1g0194091 37.261 314 178 4 24 318 252 565 3.84e-65 214
Msa0093820 MtrunA17_Chr1g0147051 36.624 314 184 5 24 322 294 607 1.21e-64 214
Msa0093820 MtrunA17_Chr8g0354901 36.859 312 179 6 24 322 275 581 1.31e-64 213
Msa0093820 MtrunA17_Chr7g0233801 36.137 321 189 4 13 318 230 549 3.29e-64 212
Msa0093820 MtrunA17_Chr2g0295531 36.422 313 180 5 24 318 231 542 2.72e-63 211
Msa0093820 MtrunA17_Chr8g0345211 37.037 324 186 6 14 322 262 582 3.56e-63 210
Msa0093820 MtrunA17_Chr7g0234711 41.176 255 143 3 73 322 17 269 7.04e-63 200
Msa0093820 MtrunA17_Chr1g0195311 40.755 265 143 4 71 322 51 314 8.01e-63 202
Msa0093820 MtrunA17_Chr4g0067611 35.463 313 183 6 24 318 257 568 6.87e-62 206
Msa0093820 MtrunA17_Chr4g0067601 34.824 313 185 5 24 318 257 568 3.54e-61 204
Msa0093820 MtrunA17_Chr4g0000121 33.861 316 191 6 24 322 243 557 1.40e-60 202
Msa0093820 MtrunA17_Chr1g0192301 34.615 312 186 6 24 318 261 571 1.83e-60 202
Msa0093820 MtrunA17_Chr1g0194081 36.859 312 178 6 22 318 252 559 3.01e-60 202
Msa0093820 MtrunA17_Chr1g0192311 33.648 318 193 6 22 322 254 570 3.52e-60 202
Msa0093820 MtrunA17_Chr1g0192281 33.648 318 193 6 22 322 254 570 3.52e-60 202
Msa0093820 MtrunA17_Chr2g0302001 42.424 231 124 4 94 318 206 433 4.36e-60 198
Msa0093820 MtrunA17_Chr2g0295551 35.331 317 186 6 20 318 245 560 7.31e-59 198
Msa0093820 MtrunA17_Chr7g0272151 32.797 311 192 5 24 318 270 579 9.86e-58 196
Msa0093820 MtrunA17_Chr5g0437831 35.370 311 184 4 24 319 72 380 5.11e-57 189
Msa0093820 MtrunA17_Chr7g0270691 34.516 310 187 5 25 320 240 547 5.20e-56 190
Msa0093820 MtrunA17_Chr8g0380581 34.259 324 195 5 15 322 55 376 5.22e-55 183
Msa0093820 MtrunA17_Chr8g0384121 38.276 290 150 8 22 284 242 529 5.90e-55 188
Msa0093820 MtrunA17_Chr4g0069891 32.492 317 199 5 14 317 274 588 1.27e-54 187
Msa0093820 MtrunA17_Chr2g0301931 36.491 285 159 8 53 322 15 292 1.05e-53 177
Msa0093820 MtrunA17_Chr2g0295541 32.277 347 187 7 20 318 245 591 1.55e-52 182
Msa0093820 MtrunA17_Chr3g0129921 36.860 293 155 7 22 284 237 529 2.10e-52 181
Msa0093820 MtrunA17_Chr7g0270661 33.333 312 190 4 24 317 258 569 8.05e-50 174
Msa0093820 MtrunA17_Chr7g0270671 33.333 312 190 4 24 317 258 569 8.05e-50 174
Msa0093820 MtrunA17_Chr7g0271381 30.284 317 198 6 25 320 240 554 1.31e-49 173
Msa0093820 MtrunA17_Chr7g0270651 31.529 314 197 4 24 319 258 571 6.50e-48 169
Msa0093820 MtrunA17_Chr6g0453551 32.509 283 163 4 25 287 6 280 1.47e-47 162
Msa0093820 MtrunA17_Chr7g0217941 32.014 278 161 4 27 284 8 277 1.26e-46 160
Msa0093820 MtrunA17_Chr7g0270631 32.323 297 188 3 24 307 246 542 1.14e-44 163
Msa0093820 MtrunA17_Chr7g0270631 29.565 345 207 5 8 319 778 1119 6.58e-43 158
Msa0093820 MtrunA17_Chr6g0487101 33.887 301 164 6 33 311 93 380 7.44e-43 152
Msa0093820 MtrunA17_Chr8g0389771 31.962 316 177 7 22 313 78 379 2.62e-41 147
Msa0093820 MtrunA17_Chr1g0194311 30.938 320 188 7 14 313 64 370 6.14e-41 146
Msa0093820 MtrunA17_Chr6g0466961 32.482 274 157 6 25 284 40 299 2.34e-39 141
Msa0093820 MtrunA17_Chr6g0466951 32.841 271 160 5 25 284 69 328 1.62e-38 139
Msa0093820 MtrunA17_Chr8g0351871 29.851 335 198 10 1 311 1 322 1.13e-35 131
Msa0093820 MtrunA17_Chr7g0258341 28.797 316 190 8 19 311 84 387 2.77e-35 132
Msa0093820 MtrunA17_Chr5g0399221 28.846 312 188 6 25 314 63 362 1.52e-34 129
Msa0093820 MtrunA17_Chr4g0070051 29.197 274 166 6 22 276 50 314 1.48e-33 126
Msa0093820 MtrunA17_Chr5g0446301 27.303 304 185 6 31 311 67 357 2.47e-33 125
Msa0093820 MtrunA17_Chr7g0265201 30.526 285 161 7 20 284 94 361 1.14e-29 116
Msa0093820 MtrunA17_Chr1g0161731 28.713 303 182 7 29 315 53 337 1.26e-29 115
Msa0093820 MtrunA17_Chr2g0295851 27.640 322 186 11 12 313 44 338 1.56e-29 115
Msa0093820 MtrunA17_Chr8g0391261 37.500 136 84 1 188 322 31 166 2.58e-29 110
Msa0093820 MtrunA17_Chr2g0294321 26.074 326 195 9 12 313 45 348 2.95e-29 114
Msa0093820 MtrunA17_Chr5g0440871 30.034 293 186 6 25 311 39 318 5.79e-29 113
Msa0093820 MtrunA17_Chr4g0037751 29.779 272 168 6 25 281 71 334 2.00e-28 112
Msa0093820 MtrunA17_Chr5g0420831 27.815 302 192 7 25 311 71 361 2.29e-26 107
Msa0093820 MtrunA17_Chr4g0025841 31.343 268 159 8 1 253 3 260 9.44e-26 103
Msa0093820 MtrunA17_Chr2g0299431 30.244 205 130 4 24 215 51 255 4.31e-23 96.7
Msa0093820 MtrunA17_Chr6g0459781 32.948 173 95 4 25 178 13 183 6.64e-23 94.4
Msa0093820 MtrunA17_Chr5g0440901 35.714 140 74 3 120 254 12 140 3.79e-22 90.9
Msa0093820 MtrunA17_Chr2g0314691 28.497 193 125 4 121 311 20 201 1.38e-19 85.5
Msa0093820 MtrunA17_Chr4g0073911 29.258 229 135 6 14 224 4 223 3.24e-18 82.4
Msa0093820 MtrunA17_Chr5g0437821 31.783 129 84 1 129 253 4 132 7.20e-18 79.0
Msa0093820 MtrunA17_Chr5g0440891 32.298 161 105 3 22 179 45 204 1.38e-13 68.6
Msa0093820 MtrunA17_Chr6g0460141 28.571 140 83 2 53 175 5 144 5.28e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0093820 AT4G03930.1 40.491 326 175 5 12 322 203 524 2.18e-77 246
Msa0093820 AT1G11590.1 39.877 326 177 5 12 322 203 524 2.92e-76 243
Msa0093820 AT3G27980.1 40.446 314 168 5 24 322 188 497 4.68e-76 241
Msa0093820 AT3G05620.1 40.506 316 157 6 24 322 240 541 5.94e-76 243
Msa0093820 AT5G04960.1 37.942 311 176 5 25 322 258 564 5.76e-73 235
Msa0093820 AT4G02300.1 36.677 319 189 3 13 318 210 528 1.02e-72 234
Msa0093820 AT2G26450.1 38.580 324 179 6 8 317 289 606 1.14e-72 236
Msa0093820 AT3G05610.1 39.144 327 181 5 11 322 242 565 1.53e-72 237
Msa0093820 AT4G02320.1 36.741 313 185 3 23 322 206 518 1.58e-72 233
Msa0093820 AT2G26440.1 38.961 308 174 4 24 318 237 543 2.00e-72 233
Msa0093820 AT1G02810.1 41.772 316 163 7 25 322 265 577 4.55e-72 233
Msa0093820 AT2G45220.1 40.575 313 165 7 24 322 206 511 7.47e-72 231
Msa0093820 AT4G00190.1 37.461 323 182 7 12 318 152 470 8.76e-72 230
Msa0093820 AT3G60730.1 39.228 311 173 4 24 318 205 515 1.84e-71 230
Msa0093820 AT1G11580.1 39.241 316 175 4 22 322 244 557 4.00e-71 230
Msa0093820 AT1G11580.2 39.241 316 175 4 22 322 265 578 7.95e-71 230
Msa0093820 AT5G27870.1 38.941 321 178 6 13 318 241 558 1.33e-70 233
Msa0093820 AT3G10720.2 38.924 316 172 6 25 322 303 615 1.84e-70 230
Msa0093820 AT3G43270.1 37.380 313 177 5 26 322 216 525 1.20e-69 226
Msa0093820 AT1G23200.1 39.172 314 167 5 24 322 250 554 2.47e-69 226
Msa0093820 AT5G04970.1 39.414 307 165 7 34 322 317 620 7.13e-69 226
Msa0093820 AT5G49180.1 37.217 309 179 4 24 318 259 566 7.46e-69 225
Msa0093820 AT4G33220.2 36.335 322 191 4 15 322 81 402 7.88e-69 220
Msa0093820 AT4G02330.1 38.924 316 172 7 25 322 259 571 1.42e-68 224
Msa0093820 AT5G53370.1 37.700 313 181 4 24 322 273 585 1.44e-68 224
Msa0093820 AT5G53370.2 37.700 313 181 4 24 322 309 621 3.02e-68 224
Msa0093820 AT3G06830.1 37.380 313 181 4 24 322 257 568 5.69e-68 222
Msa0093820 AT4G33220.1 36.335 322 191 4 15 322 202 523 5.77e-68 221
Msa0093820 AT4G33230.1 36.810 326 182 8 8 317 284 601 1.28e-67 223
Msa0093820 AT1G53840.1 37.459 307 173 5 24 316 280 581 2.05e-66 219
Msa0093820 AT5G51490.1 38.486 317 176 5 24 322 221 536 5.33e-66 216
Msa0093820 AT1G53830.1 38.835 309 176 3 27 322 279 587 3.59e-65 216
Msa0093820 AT3G59010.1 37.621 311 168 6 26 322 230 528 3.77e-65 214
Msa0093820 AT1G11370.1 42.562 242 127 2 24 253 45 286 3.12e-64 205
Msa0093820 AT2G47550.1 38.141 312 172 7 25 318 246 554 3.43e-64 212
Msa0093820 AT5G51500.1 37.342 316 181 4 24 322 225 540 4.39e-64 211
Msa0093820 AT3G10710.1 35.577 312 183 6 24 322 255 561 8.62e-63 209
Msa0093820 AT2G43050.1 36.335 322 178 6 13 318 202 512 1.98e-62 207
Msa0093820 AT5G20860.2 35.714 322 186 7 15 320 220 536 3.82e-62 206
Msa0093820 AT3G47400.1 36.086 327 193 4 12 322 268 594 5.99e-62 207
Msa0093820 AT3G49220.1 37.061 313 183 4 24 322 284 596 7.53e-62 207
Msa0093820 AT3G10720.1 40.154 259 141 4 77 322 2 259 8.63e-62 197
Msa0093820 AT3G14310.1 36.393 305 181 3 27 318 284 588 1.58e-61 206
Msa0093820 AT3G49220.3 37.061 313 183 4 24 322 329 641 2.14e-61 207
Msa0093820 AT3G14300.1 35.759 316 180 7 20 317 656 966 2.24e-58 202
Msa0093820 AT2G47040.1 35.065 308 182 5 26 317 285 590 1.55e-55 190
Msa0093820 AT3G62170.1 33.441 311 187 5 26 319 278 585 8.15e-54 185
Msa0093820 AT2G47030.1 34.516 310 185 6 24 317 276 583 1.05e-53 185
Msa0093820 AT5G09760.1 36.972 284 156 6 24 284 240 523 4.06e-53 183
Msa0093820 AT5G09760.2 36.972 284 156 6 24 284 266 549 7.27e-53 182
Msa0093820 AT4G15980.1 32.476 311 195 4 24 320 391 700 1.67e-51 181
Msa0093820 AT4G15980.2 32.476 311 195 4 24 320 401 710 2.05e-51 181
Msa0093820 AT5G64640.1 33.333 321 183 10 22 315 286 602 2.60e-50 176
Msa0093820 AT5G20860.1 32.082 293 151 5 15 291 220 480 4.54e-47 166
Msa0093820 AT3G29090.1 32.509 283 163 4 22 284 4 278 1.43e-46 160
Msa0093820 AT5G19730.1 33.333 306 169 6 28 311 89 381 1.59e-45 159
Msa0093820 AT2G21610.1 34.074 270 160 5 23 284 49 308 5.95e-40 144
Msa0093820 AT2G21610.2 34.074 270 160 5 23 284 54 313 6.34e-40 144
Msa0093820 AT1G05310.1 30.503 318 186 8 17 311 83 388 8.68e-40 144
Msa0093820 AT2G36710.1 31.310 313 181 8 25 316 91 390 1.16e-39 144
Msa0093820 AT2G36700.1 31.169 308 181 8 22 311 39 333 3.89e-38 138
Msa0093820 AT5G07430.1 30.667 300 184 6 25 311 67 355 9.62e-38 138
Msa0093820 AT3G17060.1 29.968 317 192 7 12 312 35 337 8.33e-37 135
Msa0093820 AT5G55590.2 30.800 250 143 4 25 253 82 322 1.07e-33 126
Msa0093820 AT5G55590.1 29.126 309 185 6 25 311 82 378 1.37e-33 127
Msa0093820 AT5G47500.1 27.184 309 191 5 25 311 61 357 6.15e-33 125
Msa0093820 AT5G07420.1 30.258 271 168 5 25 282 67 329 9.80e-33 124
Msa0093820 AT3G24130.1 29.286 280 169 5 25 284 34 304 1.82e-32 123
Msa0093820 AT5G26810.1 30.060 336 196 8 4 311 9 333 5.61e-32 122
Msa0093820 AT5G18990.1 30.619 307 168 8 10 284 6 299 5.71e-32 122
Msa0093820 AT2G19150.1 29.508 305 186 7 24 311 40 332 4.23e-31 120
Msa0093820 AT5G61680.1 29.197 274 172 5 25 284 69 334 6.50e-30 117
Msa0093820 AT2G47280.1 28.000 325 202 7 6 311 16 327 3.33e-28 112
Msa0093820 AT1G69940.1 27.737 274 176 5 25 284 66 331 1.47e-26 108
Msa0093820 AT5G07410.1 27.737 274 176 5 25 284 66 331 2.56e-26 107
Msa0093820 AT2G19150.2 30.488 246 146 5 25 254 41 277 3.34e-25 102
Msa0093820 AT1G44980.1 32.203 177 111 1 12 179 65 241 3.70e-23 96.7

Find 88 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGGAACACAATGCTTTA+AGG 0.155904 1_2:-76836404 None:intergenic
TACCTATGGTGGAACCATTT+TGG 0.208948 1_2:-76836635 None:intergenic
GACTTTCTGTTCTCATCTTC+AGG 0.211503 1_2:-76840814 None:intergenic
ATCTCTTGGATGCTGATTCT+TGG 0.228656 1_2:+76841082 Msa0093820:CDS
TATGTTGAGTTTGAGAATTT+TGG 0.250434 1_2:+76840970 Msa0093820:CDS
GACACCTTATGGGCTGTTTC+CGG 0.252396 1_2:+76840601 Msa0093820:CDS
AAGGATTCCAAGACACCTTA+TGG 0.262225 1_2:+76840590 Msa0093820:CDS
TGGCCTGGTGTTACAGTTCT+TGG 0.279925 1_2:+76841024 Msa0093820:CDS
TTTCACTGCTTCCTATCTCT+TGG 0.309292 1_2:+76841068 Msa0093820:CDS
ATACTTGTTGCTCACCAAAA+TGG 0.309514 1_2:+76836621 Msa0093820:CDS
ATATTATAGTTCACTATGAT+AGG 0.365814 1_2:-76841124 None:intergenic
TAAGGTTGGTGACTCCAATC+AGG 0.402137 1_2:-76836501 None:intergenic
GTGAAAGGGAGTGCTTTGTT+TGG 0.404455 1_2:-76841051 None:intergenic
AGAGGTTGGGAAGGGATGTC+TGG 0.405156 1_2:+76840925 Msa0093820:CDS
TGAAAGGGAGTGCTTTGTTT+GGG 0.406102 1_2:-76841050 None:intergenic
TCAGAGGTGCATGCAACATT+AGG 0.423310 1_2:+76840835 Msa0093820:CDS
CATTCGTGGAGAAGGGTTCA+TGG 0.426255 1_2:+76840465 Msa0093820:CDS
AGAATCAGCATCCAAGAGAT+AGG 0.427401 1_2:-76841079 None:intergenic
GATAATATTAATTGTACCAT+TGG 0.442334 1_2:-76836421 None:intergenic
ATAAGGTGTCTTGGAATCCT+TGG 0.453150 1_2:-76840588 None:intergenic
CATGGTTGATCCTAGAGGTT+GGG 0.464871 1_2:+76840912 Msa0093820:CDS
CTATCAGAAATGCCCCTGAT+TGG 0.468913 1_2:+76836487 Msa0093820:CDS
CGCTGTATTTCAAGACTGCA+TGG 0.468966 1_2:+76840687 Msa0093820:CDS
GCTAAAACGTGAACGATGTA+AGG 0.471367 1_2:-76836519 None:intergenic
CGTGCAGACATTCGTGGAGA+AGG 0.473938 1_2:+76840457 Msa0093820:intron
ATAATCTCCACTCCCATCCT+TGG 0.478462 1_2:-76836448 None:intergenic
CAACATTAGGTCGTCCTTGG+AGG 0.483512 1_2:+76840848 Msa0093820:CDS
AAGATTAATATTAAGCTCCT+AGG 0.484751 1_2:+76836579 Msa0093820:CDS
GCATTGTTTCATAGATTCCA+TGG 0.486225 1_2:+76840894 Msa0093820:CDS
AGGATTCCAAGACACCTTAT+GGG 0.488271 1_2:+76840591 Msa0093820:CDS
CTTAAAGCATTGTGTTCCAA+TGG 0.491519 1_2:+76836405 Msa0093820:CDS
GATTCTTGGATTCCCTCTAC+AGG 0.495727 1_2:+76841096 Msa0093820:CDS
TCTACCGGAAACAGCCCATA+AGG 0.495858 1_2:-76840605 None:intergenic
AAACAGCCCATAAGGTGTCT+TGG 0.506742 1_2:-76840597 None:intergenic
GGAATCCTTGGATGGAGCAT+TGG 0.509770 1_2:-76840576 None:intergenic
AATATTATCGTATCCAAGGA+TGG 0.511690 1_2:+76836435 Msa0093820:CDS
GCTAGATGCAAGCGCTGCAG+TGG 0.517531 1_2:+76840519 Msa0093820:CDS
GTTCTCATCTTCAGGTGACA+TGG 0.522759 1_2:-76840806 None:intergenic
AAGAGATAGGAAGCAGTGAA+AGG 0.525350 1_2:-76841066 None:intergenic
GGCACTGTCGACTTCATCTA+CGG 0.525562 1_2:+76840655 Msa0093820:CDS
CCATGGTTGATCCTAGAGGT+TGG 0.528990 1_2:+76840911 Msa0093820:CDS
AATATTAAGCTCCTAGGTCA+TGG 0.533827 1_2:+76836585 Msa0093820:CDS
CTACCATCAGTGTTAGATCC+AGG 0.538585 1_2:-76840994 None:intergenic
AGAGATAGGAAGCAGTGAAA+GGG 0.549867 1_2:-76841065 None:intergenic
AATTAATATTATCGTATCCA+AGG 0.551137 1_2:+76836431 Msa0093820:CDS
CGTAAGGAAATTACCTATGG+TGG 0.551493 1_2:-76836646 None:intergenic
ATGCAACATTAGGTCGTCCT+TGG 0.555787 1_2:+76840845 Msa0093820:CDS
GGGTTCATGGCTCAAAACAT+TGG 0.557351 1_2:+76840478 Msa0093820:CDS
AGCTTAATATTAATCTTACT+CGG 0.563150 1_2:-76836573 None:intergenic
CACCAAAATGGTTCCACCAT+AGG 0.563382 1_2:+76836633 Msa0093820:CDS
AAGGTTGGTGACTCCAATCA+GGG 0.566101 1_2:-76836500 None:intergenic
ACACTGATGGTAGAGTGGAT+TGG 0.574749 1_2:+76841004 Msa0093820:CDS
TGCAGTGGCTGTTCGAAACG+AGG 0.574998 1_2:+76840534 Msa0093820:CDS
GTGCAGACATTCGTGGAGAA+GGG 0.577291 1_2:+76840458 Msa0093820:intron
GACATCCCTTCCCAACCTCT+AGG 0.577356 1_2:-76840922 None:intergenic
GATGGTAGAGTGGATTGGCC+TGG 0.577428 1_2:+76841009 Msa0093820:CDS
TATTATAGTTCACTATGATA+GGG 0.582676 1_2:-76841123 None:intergenic
ATGATAGGGAACACCTGTAG+AGG 0.584085 1_2:-76841109 None:intergenic
AACATAAGTAACTTTATCAG+TGG 0.584093 1_2:-76840953 None:intergenic
GGACCTGGATCTAACACTGA+TGG 0.584488 1_2:+76840991 Msa0093820:CDS
ATCGTATCCAAGGATGGGAG+TGG 0.585498 1_2:+76836441 Msa0093820:CDS
AAACGTGAACGATGTAAGGT+TGG 0.585695 1_2:-76836515 None:intergenic
ATATTATCGTATCCAAGGAT+GGG 0.589849 1_2:+76836436 Msa0093820:CDS
ACATGGTGAATTTACAACGT+TGG 0.595200 1_2:-76840789 None:intergenic
AACATTAGGTCGTCCTTGGA+GGG 0.598043 1_2:+76840849 Msa0093820:CDS
ATCTAACACTGATGGTAGAG+TGG 0.599125 1_2:+76840999 Msa0093820:CDS
GTTGATCCTAGAGGTTGGGA+AGG 0.603972 1_2:+76840916 Msa0093820:CDS
GTGAATCGTGCAGACATTCG+TGG 0.608693 1_2:+76840451 Msa0093820:intron
GGTGTCTTGGAATCCTTGGA+TGG 0.617543 1_2:-76840584 None:intergenic
AGATGAGAACAGAAAGTCAG+AGG 0.617832 1_2:+76840819 Msa0093820:CDS
GAGTGGAGATTATACAAGTG+TGG 0.619088 1_2:+76836458 Msa0093820:CDS
ACATAAGTAACTTTATCAGT+GGG 0.622375 1_2:-76840952 None:intergenic
TGATAGGGAACACCTGTAGA+GGG 0.635193 1_2:-76841108 None:intergenic
GATTCCATGGTTGATCCTAG+AGG 0.635424 1_2:+76840907 Msa0093820:CDS
ACTGTAGAATATGCCCTCCA+AGG 0.643512 1_2:-76840862 None:intergenic
TTGCCAAGAACTGTAACACC+AGG 0.646375 1_2:-76841027 None:intergenic
TGCAGCAGCAGTGTTAGTGT+TGG 0.648132 1_2:+76836371 Msa0093820:CDS
AGTGGAGATTATACAAGTGT+GGG 0.660897 1_2:+76836459 Msa0093820:CDS
CCAACCTCTAGGATCAACCA+TGG 0.665177 1_2:-76840911 None:intergenic
GGTGAGCAACAAGTATTGTG+TGG 0.669918 1_2:-76836614 None:intergenic
TTGATCCTAGAGGTTGGGAA+GGG 0.674411 1_2:+76840917 Msa0093820:CDS
TGTGGTTTGAACCATGACCT+AGG 0.690844 1_2:-76836596 None:intergenic
TTAATATTAATCTTACTCGG+TGG 0.698483 1_2:-76836570 None:intergenic
TTGGAGGGCATATTCTACAG+TGG 0.702836 1_2:+76840864 Msa0093820:CDS
TGGACTTTCACGTGACTGTG+CGG 0.713693 1_2:-76840743 None:intergenic
CATGCAGTCTTGAAATACAG+CGG 0.720620 1_2:-76840686 None:intergenic
AGGTTGGTGACTCCAATCAG+GGG 0.723941 1_2:-76836499 None:intergenic
CATTGGATTTGTGAACACAG+CGG 0.782931 1_2:+76840495 Msa0093820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTTTAAAAAATAAAA+CGG + chr1_2:76838105-76838124 Msa0093820:intron 0.0%
!!! TTTAAAACTTATTAAAAAAG+GGG + chr1_2:76837732-76837751 Msa0093820:intron 10.0%
!!! TTTTTTAACAAAAAATCAAA+TGG - chr1_2:76837808-76837827 None:intergenic 10.0%
!! AAGATATTAAAAAATATTGA+TGG - chr1_2:76838821-76838840 None:intergenic 10.0%
!! TATTAAAAGGAAAAATATTA+AGG + chr1_2:76839355-76839374 Msa0093820:intron 10.0%
!! ATTAAAAGGAAAAATATTAA+GGG + chr1_2:76839356-76839375 Msa0093820:intron 10.0%
!!! AATAATTTTAATTGGATATT+TGG + chr1_2:76839557-76839576 Msa0093820:intron 10.0%
!! AATAAAAATTAAAAATAAGC+AGG + chr1_2:76840083-76840102 Msa0093820:intron 10.0%
!! ATAAATATAAAAGTAACGTA+AGG - chr1_2:76836665-76836684 None:intergenic 15.0%
!! TCAAATGAAAATATTGATAA+TGG - chr1_2:76837664-76837683 None:intergenic 15.0%
!!! ATCTTTTGTTAAAATATGAT+TGG - chr1_2:76838043-76838062 None:intergenic 15.0%
!!! ATAATTAGCAAATTTTTGTT+AGG + chr1_2:76838595-76838614 Msa0093820:intron 15.0%
!! TTATAGGTGTATATATTAAT+AGG + chr1_2:76839000-76839019 Msa0093820:intron 15.0%
!! ATATATATATATTGGTATCA+CGG + chr1_2:76839032-76839051 Msa0093820:intron 15.0%
!! AATTTAATCAAATTTCAATG+AGG + chr1_2:76839303-76839322 Msa0093820:intron 15.0%
!!! TTTTAATATAATCTTAGTCT+TGG - chr1_2:76839343-76839362 None:intergenic 15.0%
!! AAGACTAAGATTATATTAAA+AGG + chr1_2:76839342-76839361 Msa0093820:intron 15.0%
!!! CCAATTAAAATTATTGTTTT+AGG - chr1_2:76839552-76839571 None:intergenic 15.0%
!!! CCTAAAACAATAATTTTAAT+TGG + chr1_2:76839549-76839568 Msa0093820:intron 15.0%
!!! AATTGTATCCATATTTTTTT+TGG + chr1_2:76840128-76840147 Msa0093820:intron 15.0%
!! AATATTCACCAAAAAAAATA+TGG - chr1_2:76840139-76840158 None:intergenic 15.0%
!!! TTGGTAAATTACTTTTTTTA+AGG - chr1_2:76840283-76840302 None:intergenic 15.0%
!! TTAGGAAAATATATATTTCA+TGG - chr1_2:76840331-76840350 None:intergenic 15.0%
!!! TGAAATATATATTTTCCTAA+TGG + chr1_2:76840331-76840350 Msa0093820:intron 15.0%
!! GATAATATTAATTGTACCAT+TGG - chr1_2:76836424-76836443 None:intergenic 20.0%
!! AATTAATATTATCGTATCCA+AGG + chr1_2:76836431-76836450 Msa0093820:CDS 20.0%
!! AGCTTAATATTAATCTTACT+CGG - chr1_2:76836576-76836595 None:intergenic 20.0%
!! TAATACAAAGAAGAACTAAA+AGG - chr1_2:76836785-76836804 None:intergenic 20.0%
!! TATCAATTTCTCAAAAGAAA+TGG - chr1_2:76837196-76837215 None:intergenic 20.0%
!!! ATTTCTTTTGAGAAATTGAT+AGG + chr1_2:76837195-76837214 Msa0093820:intron 20.0%
!! ATTTCTCTCTCATTAATTAA+TGG + chr1_2:76837354-76837373 Msa0093820:intron 20.0%
!! TATCAATTTCTCAAAAGAAA+TGG - chr1_2:76837196-76837215 None:intergenic 20.0%
!!! ATTTCTTTTGAGAAATTGAT+AGG + chr1_2:76837195-76837214 Msa0093820:intron 20.0%
!!! TTTCTTTTGAGAAATTGATA+GGG + chr1_2:76837196-76837215 Msa0093820:intron 20.0%
!! TCAAATGGAAATATTGATAA+TGG - chr1_2:76837793-76837812 None:intergenic 20.0%
!! TTTGTTAAAATATGATTGGA+TGG - chr1_2:76838039-76838058 None:intergenic 20.0%
!! AGGAATATCTATTTATTTGA+GGG - chr1_2:76838334-76838353 None:intergenic 20.0%
!! AAGGAATATCTATTTATTTG+AGG - chr1_2:76838335-76838354 None:intergenic 20.0%
!! TCAAATAAATAGATATTCCT+TGG + chr1_2:76838334-76838353 Msa0093820:intron 20.0%
!!! TATCTCTGAACATTTTTTTT+TGG + chr1_2:76838840-76838859 Msa0093820:intron 20.0%
!!! TAAGCAAAAATCTACATTTT+AGG + chr1_2:76838894-76838913 Msa0093820:intron 20.0%
!!! AAATGTAGATTTTTGCTTAT+AGG + chr1_2:76838984-76839003 Msa0093820:intron 20.0%
!!! TTTTTCATTCTCCAATATAT+TGG - chr1_2:76839179-76839198 None:intergenic 20.0%
!!! ATTTTTCGTTATATGAAACT+GGG + chr1_2:76839233-76839252 Msa0093820:intron 20.0%
!!! TTGTTTTTCTTTTAACTGTT+TGG - chr1_2:76839862-76839881 None:intergenic 20.0%
!! ACAATTTAAAAACTACTAAG+AGG - chr1_2:76840114-76840133 None:intergenic 20.0%
!! GTAGTTATGTAACAAAAATA+TGG - chr1_2:76840167-76840186 None:intergenic 20.0%
!!! GAAAGTTTAAATTTTCCATT+AGG - chr1_2:76840349-76840368 None:intergenic 20.0%
! TTAATATTAATCTTACTCGG+TGG - chr1_2:76836573-76836592 None:intergenic 25.0%
! AAGATTAATATTAAGCTCCT+AGG + chr1_2:76836579-76836598 Msa0093820:CDS 25.0%
! AAAGAAGAACTAAAAGGTAA+CGG - chr1_2:76836779-76836798 None:intergenic 25.0%
!! GTATACAAGTTCTTTTTGAA+TGG + chr1_2:76836832-76836851 Msa0093820:intron 25.0%
! TTGTAATAAACTCATTGGAT+TGG - chr1_2:76836938-76836957 None:intergenic 25.0%
! TGATGAACTAACATCAAATA+CGG + chr1_2:76837296-76837315 Msa0093820:intron 25.0%
! GAAATACACATTAAGAAGAT+TGG - chr1_2:76837339-76837358 None:intergenic 25.0%
! TATATTCGTCAACTTTCTAT+TGG + chr1_2:76837458-76837477 Msa0093820:intron 25.0%
!!! TAAGTAGAGCTCTAAAAAAT+TGG + chr1_2:76837503-76837522 Msa0093820:intron 25.0%
!!! TGAAAATATTGATAATGGAC+TGG - chr1_2:76837659-76837678 None:intergenic 25.0%
! AAACTTATTAAAAAAGGGGT+TGG + chr1_2:76837736-76837755 Msa0093820:intron 25.0%
! AACTTATTAAAAAAGGGGTT+GGG + chr1_2:76837737-76837756 Msa0093820:intron 25.0%
!! ATGCTATGATAATTTTTACG+AGG + chr1_2:76838368-76838387 Msa0093820:intron 25.0%
!! TGCTATGATAATTTTTACGA+GGG + chr1_2:76838369-76838388 Msa0093820:intron 25.0%
! AGTTATGTATAAGAGTTATG+CGG + chr1_2:76838552-76838571 Msa0093820:intron 25.0%
! TAGATTAGAGTTAATCTAGT+TGG + chr1_2:76838619-76838638 Msa0093820:intron 25.0%
!!! ATTGAGCTCAACTTTTTTTT+AGG - chr1_2:76838749-76838768 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG + chr1_2:76838919-76838938 Msa0093820:intron 25.0%
!! TTTTTGCTAAATGTGTGATA+TGG - chr1_2:76839063-76839082 None:intergenic 25.0%
!! GATTTTTCGTTATATGAAAC+TGG + chr1_2:76839232-76839251 Msa0093820:intron 25.0%
! AAAGGAAAAATATTAAGGGT+TGG + chr1_2:76839360-76839379 Msa0093820:intron 25.0%
!! ATGTCTTTTCTTCTATATGA+TGG - chr1_2:76839435-76839454 None:intergenic 25.0%
! CATATAGAAGAAAAGACATT+TGG + chr1_2:76839436-76839455 Msa0093820:intron 25.0%
! ATAATAATCAAGTAACCACA+TGG - chr1_2:76840015-76840034 None:intergenic 25.0%
! TTTGGTTATGCTTATAAGTA+TGG - chr1_2:76840412-76840431 None:intergenic 25.0%
! TACAAAAACTGTGAAATCTA+TGG + chr1_2:76840634-76840653 Msa0093820:CDS 25.0%
! ACATAAGTAACTTTATCAGT+GGG - chr1_2:76840955-76840974 None:intergenic 25.0%
! AACATAAGTAACTTTATCAG+TGG - chr1_2:76840956-76840975 None:intergenic 25.0%
!! TATGTTGAGTTTGAGAATTT+TGG + chr1_2:76840970-76840989 Msa0093820:CDS 25.0%
AATATTATCGTATCCAAGGA+TGG + chr1_2:76836435-76836454 Msa0093820:CDS 30.0%
ATATTATCGTATCCAAGGAT+GGG + chr1_2:76836436-76836455 Msa0093820:CDS 30.0%
TAACGTAAGGAAATTACCTA+TGG - chr1_2:76836652-76836671 None:intergenic 30.0%
! TTGTGTCTCTTTTCTATTGT+GGG - chr1_2:76836906-76836925 None:intergenic 30.0%
! TTTGTGTCTCTTTTCTATTG+TGG - chr1_2:76836907-76836926 None:intergenic 30.0%
! GTGGTTTGTAATAAACTCAT+TGG - chr1_2:76836943-76836962 None:intergenic 30.0%
!! TTCGAGAGAGTTAATTTGTT+GGG - chr1_2:76837032-76837051 None:intergenic 30.0%
! CATTTTAGGCAAGATATAAG+TGG + chr1_2:76837115-76837134 Msa0093820:intron 30.0%
ATGTGTATTTCTCTCATGAA+TGG + chr1_2:76837164-76837183 Msa0093820:intron 30.0%
CAATTTCTCAAAAGAAATGG+AGG - chr1_2:76837193-76837212 None:intergenic 30.0%
CAATTTCTCAAAAGAAATGG+AGG - chr1_2:76837193-76837212 None:intergenic 30.0%
!!! CTTTTTTATATGGGCCAAAT+GGG - chr1_2:76837604-76837623 None:intergenic 30.0%
CATTTGGCCCATATAAAAAA+GGG + chr1_2:76837603-76837622 Msa0093820:intron 30.0%
!! TGGAAATATTGATAATGGAC+TGG - chr1_2:76837788-76837807 None:intergenic 30.0%
TATTGCTATAGGTGTCAAAT+GGG - chr1_2:76838259-76838278 None:intergenic 30.0%
TTATTGCTATAGGTGTCAAA+TGG - chr1_2:76838260-76838279 None:intergenic 30.0%
AGTTAGTGACTTATTGCTAT+AGG - chr1_2:76838270-76838289 None:intergenic 30.0%
GTTATGTATAAGAGTTATGC+GGG + chr1_2:76838553-76838572 Msa0093820:intron 30.0%
CATTCATTTAATGATGCACA+TGG - chr1_2:76838958-76838977 None:intergenic 30.0%
!! TTCACTTTTCTAAATCAAGC+TGG - chr1_2:76839095-76839114 None:intergenic 30.0%
TGTTACAAAATCCAAAGCTT+TGG + chr1_2:76839124-76839143 Msa0093820:intron 30.0%
TACATGTGAGTCCAATATAT+TGG + chr1_2:76839165-76839184 Msa0093820:intron 30.0%
!! TTAGTCTTGGTTTATCAACA+AGG - chr1_2:76839330-76839349 None:intergenic 30.0%
GAAAAATATTAAGGGTTGGA+GGG + chr1_2:76839364-76839383 Msa0093820:intron 30.0%
AAAAATATTAAGGGTTGGAG+GGG + chr1_2:76839365-76839384 Msa0093820:intron 30.0%
!! CACTTGTTTTCTACATTTTG+GGG - chr1_2:76839493-76839512 None:intergenic 30.0%
!! GCACTTGTTTTCTACATTTT+GGG - chr1_2:76839494-76839513 None:intergenic 30.0%
!! TGCACTTGTTTTCTACATTT+TGG - chr1_2:76839495-76839514 None:intergenic 30.0%
TAGGTTAAGTATCACATCTA+AGG - chr1_2:76839533-76839552 None:intergenic 30.0%
! AATTCGGTTATAGTTTTCCT+TGG - chr1_2:76839592-76839611 None:intergenic 30.0%
AAGGAAAACTATAACCGAAT+TGG + chr1_2:76839591-76839610 Msa0093820:intron 30.0%
AGGAAAACTATAACCGAATT+GGG + chr1_2:76839592-76839611 Msa0093820:intron 30.0%
TTTGTTGGATCAATCAAGAT+TGG - chr1_2:76839938-76839957 None:intergenic 30.0%
TTACATAACTACGTTACTGT+TGG + chr1_2:76840175-76840194 Msa0093820:intron 30.0%
!! ATTTACCAAAAGAAGCATTG+TGG + chr1_2:76840294-76840313 Msa0093820:intron 30.0%
! GTTTTTGTAGAATTGTCTAC+CGG - chr1_2:76840623-76840642 None:intergenic 30.0%
GAAAGTCCATATGAAAAAAC+AGG + chr1_2:76840757-76840776 Msa0093820:CDS 30.0%
!!! GTGAAACCTGTTTTTTCATA+TGG - chr1_2:76840766-76840785 None:intergenic 30.0%
CATTGGAACACAATGCTTTA+AGG - chr1_2:76836407-76836426 None:intergenic 35.0%
!! CTTAAAGCATTGTGTTCCAA+TGG + chr1_2:76836405-76836424 Msa0093820:CDS 35.0%
AGTGGAGATTATACAAGTGT+GGG + chr1_2:76836459-76836478 Msa0093820:CDS 35.0%
AATATTAAGCTCCTAGGTCA+TGG + chr1_2:76836585-76836604 Msa0093820:CDS 35.0%
! ATACTTGTTGCTCACCAAAA+TGG + chr1_2:76836621-76836640 Msa0093820:CDS 35.0%
!! AAGAACTAAAAGGTAACGGA+AGG - chr1_2:76836775-76836794 None:intergenic 35.0%
GTTATGTTATGCTCCTTCAA+AGG - chr1_2:76836995-76837014 None:intergenic 35.0%
!! TAATTTGTTGGGAACGCTAT+GGG - chr1_2:76837021-76837040 None:intergenic 35.0%
!! TTAATTTGTTGGGAACGCTA+TGG - chr1_2:76837022-76837041 None:intergenic 35.0%
!! GTTCGAGAGAGTTAATTTGT+TGG - chr1_2:76837033-76837052 None:intergenic 35.0%
TTGGACATGATCTTATACCT+AGG + chr1_2:76837477-76837496 Msa0093820:intron 35.0%
!!! GCATTTGGGCTAGTTTTTTT+CGG - chr1_2:76837559-76837578 None:intergenic 35.0%
!!! CCTTTTTTATATGGGCCAAA+TGG - chr1_2:76837605-76837624 None:intergenic 35.0%
CCATTTGGCCCATATAAAAA+AGG + chr1_2:76837602-76837621 Msa0093820:intron 35.0%
TATTAAAAAAGGGGTTGGGT+CGG + chr1_2:76837741-76837760 Msa0093820:intron 35.0%
! CTTGTGTTGCAAACCTTTTA+AGG + chr1_2:76838288-76838307 Msa0093820:intron 35.0%
TATTTATTTGAGGGATGTCG+TGG - chr1_2:76838325-76838344 None:intergenic 35.0%
! TATCACGAAGTATTTCCGTT+TGG + chr1_2:76838649-76838668 Msa0093820:intron 35.0%
!!! ATTTCCGTTTGGCTTTTTTC+TGG + chr1_2:76838660-76838679 Msa0093820:intron 35.0%
!!! TTTCCGTTTGGCTTTTTTCT+GGG + chr1_2:76838661-76838680 Msa0093820:intron 35.0%
GAAAGAGATACAAAGACTGA+GGG - chr1_2:76838700-76838719 None:intergenic 35.0%
AGAAAGAGATACAAAGACTG+AGG - chr1_2:76838701-76838720 None:intergenic 35.0%
TGCTTATATTAGTGACCAGA+GGG - chr1_2:76838880-76838899 None:intergenic 35.0%
TTGCTTATATTAGTGACCAG+AGG - chr1_2:76838881-76838900 None:intergenic 35.0%
! CTATTTCTCATCCAAAGCTT+TGG - chr1_2:76839138-76839157 None:intergenic 35.0%
GGAAAAATATTAAGGGTTGG+AGG + chr1_2:76839363-76839382 Msa0093820:intron 35.0%
! GTTATAGTTTTCCTTGGAGT+AGG - chr1_2:76839586-76839605 None:intergenic 35.0%
!! CATTCGGGATATTGTTTTGT+TGG - chr1_2:76839953-76839972 None:intergenic 35.0%
TAGTGAAAACATGATCCATG+TGG + chr1_2:76839997-76840016 Msa0093820:intron 35.0%
CTAATTAATTCACTGCAGCT+AGG - chr1_2:76840056-76840075 None:intergenic 35.0%
! TATAGCCACAATGCTTCTTT+TGG - chr1_2:76840302-76840321 None:intergenic 35.0%
!! AAAGAAGCATTGTGGCTATA+AGG + chr1_2:76840302-76840321 Msa0093820:intron 35.0%
AAGCATAACCAAACTCTGAT+TGG + chr1_2:76840419-76840438 Msa0093820:intron 35.0%
ACATGGTGAATTTACAACGT+TGG - chr1_2:76840792-76840811 None:intergenic 35.0%
GCATTGTTTCATAGATTCCA+TGG + chr1_2:76840894-76840913 Msa0093820:CDS 35.0%
GAGTGGAGATTATACAAGTG+TGG + chr1_2:76836458-76836477 Msa0093820:CDS 40.0%
AAACGTGAACGATGTAAGGT+TGG - chr1_2:76836518-76836537 None:intergenic 40.0%
GCTAAAACGTGAACGATGTA+AGG - chr1_2:76836522-76836541 None:intergenic 40.0%
!! TACATCGTTCACGTTTTAGC+AGG + chr1_2:76836522-76836541 Msa0093820:CDS 40.0%
!! TACCTATGGTGGAACCATTT+TGG - chr1_2:76836638-76836657 None:intergenic 40.0%
CGTAAGGAAATTACCTATGG+TGG - chr1_2:76836649-76836668 None:intergenic 40.0%
AACCACTCATAGAACATGCA+TGG + chr1_2:76836957-76836976 Msa0093820:intron 40.0%
GAGAACACTATCACCTTTGA+AGG + chr1_2:76836979-76836998 Msa0093820:intron 40.0%
AAATGAGTATACACGCCCAT+CGG + chr1_2:76837088-76837107 Msa0093820:intron 40.0%
TGCCTAAAATGATGACCGAT+GGG - chr1_2:76837106-76837125 None:intergenic 40.0%
TTGCCTAAAATGATGACCGA+TGG - chr1_2:76837107-76837126 None:intergenic 40.0%
!! GAAGATTGGTTTGTTTCACG+TGG - chr1_2:76837325-76837344 None:intergenic 40.0%
TCTCTCTACATGGTTTAGGT+AGG - chr1_2:76837418-76837437 None:intergenic 40.0%
TACCTAAACCATGTAGAGAG+AGG + chr1_2:76837417-76837436 Msa0093820:intron 40.0%
ACCTAAACCATGTAGAGAGA+GGG + chr1_2:76837418-76837437 Msa0093820:intron 40.0%
! CAAAATATGGGCTAATGGGT+CGG - chr1_2:76837529-76837548 None:intergenic 40.0%
! GACCCATTAGCCCATATTTT+GGG + chr1_2:76837528-76837547 Msa0093820:intron 40.0%
! GACCCAAAATATGGGCTAAT+GGG - chr1_2:76837533-76837552 None:intergenic 40.0%
!! CATTAGCCCATATTTTGGGT+CGG + chr1_2:76837532-76837551 Msa0093820:intron 40.0%
!! ATTAGCCCATATTTTGGGTC+GGG + chr1_2:76837533-76837552 Msa0093820:intron 40.0%
TGGCCCATATAAAAAAGGGT+TGG + chr1_2:76837607-76837626 Msa0093820:intron 40.0%
GGCCCATATAAAAAAGGGTT+GGG + chr1_2:76837608-76837627 Msa0093820:intron 40.0%
!!! GGCCCAACCCTTTTTTATAT+GGG - chr1_2:76837613-76837632 None:intergenic 40.0%
CATATAAAAAAGGGTTGGGC+CGG + chr1_2:76837612-76837631 Msa0093820:intron 40.0%
AAAAATAAAACGGGTCGTGC+CGG + chr1_2:76838115-76838134 Msa0093820:intron 40.0%
!! CAAACCTTTTAAGGAGCCAA+AGG + chr1_2:76838297-76838316 Msa0093820:intron 40.0%
AATTATCATAGCATCGTCGC+TGG - chr1_2:76838362-76838381 None:intergenic 40.0%
TGACCCAGAAAAAAGCCAAA+CGG - chr1_2:76838667-76838686 None:intergenic 40.0%
!!! CCTTTTAAGTTGCTGCATAC+AGG - chr1_2:76839398-76839417 None:intergenic 40.0%
CCTGTATGCAGCAACTTAAA+AGG + chr1_2:76839395-76839414 Msa0093820:intron 40.0%
ATGCAGCAACTTAAAAGGAG+TGG + chr1_2:76839400-76839419 Msa0093820:intron 40.0%
!!! TTTTCTACATTTTGGGGTGC+GGG - chr1_2:76839487-76839506 None:intergenic 40.0%
!!! GTTTTCTACATTTTGGGGTG+CGG - chr1_2:76839488-76839507 None:intergenic 40.0%
ATATTTGGCAACCTACTCCA+AGG + chr1_2:76839572-76839591 Msa0093820:intron 40.0%
TCCAGATGTAAGACCCAATT+CGG - chr1_2:76839608-76839627 None:intergenic 40.0%
CTGGAAAAATCTTGCCTAGT+AGG + chr1_2:76839623-76839642 Msa0093820:intron 40.0%
CAGCTATAAGGTGATCACTT+TGG - chr1_2:76839747-76839766 None:intergenic 40.0%
TCCAATTAGATGCATGTGGT+TGG + chr1_2:76839777-76839796 Msa0093820:intron 40.0%
TCCAACCACATGCATCTAAT+TGG - chr1_2:76839781-76839800 None:intergenic 40.0%
TTCCACACAATCACACATTC+GGG - chr1_2:76839968-76839987 None:intergenic 40.0%
CTTCCACACAATCACACATT+CGG - chr1_2:76839969-76839988 None:intergenic 40.0%
CTTTCCCCATGACAAAAAGA+AGG + chr1_2:76840364-76840383 Msa0093820:intron 40.0%
! ACCTCCTTCTTTTTGTCATG+GGG - chr1_2:76840371-76840390 None:intergenic 40.0%
! CACCTCCTTCTTTTTGTCAT+GGG - chr1_2:76840372-76840391 None:intergenic 40.0%
CATTGGATTTGTGAACACAG+CGG + chr1_2:76840495-76840514 Msa0093820:CDS 40.0%
! TTTTTCCAATGCTCCATCCA+AGG + chr1_2:76840571-76840590 Msa0093820:CDS 40.0%
! ATAAGGTGTCTTGGAATCCT+TGG - chr1_2:76840591-76840610 None:intergenic 40.0%
AAGGATTCCAAGACACCTTA+TGG + chr1_2:76840590-76840609 Msa0093820:CDS 40.0%
AGGATTCCAAGACACCTTAT+GGG + chr1_2:76840591-76840610 Msa0093820:CDS 40.0%
CATGCAGTCTTGAAATACAG+CGG - chr1_2:76840689-76840708 None:intergenic 40.0%
GACTTTCTGTTCTCATCTTC+AGG - chr1_2:76840817-76840836 None:intergenic 40.0%
AGATGAGAACAGAAAGTCAG+AGG + chr1_2:76840819-76840838 Msa0093820:CDS 40.0%
! GAGTTTGAGAATTTTGGACC+TGG + chr1_2:76840976-76840995 Msa0093820:CDS 40.0%
ATCTAACACTGATGGTAGAG+TGG + chr1_2:76840999-76841018 Msa0093820:CDS 40.0%
!! TGAAAGGGAGTGCTTTGTTT+GGG - chr1_2:76841053-76841072 None:intergenic 40.0%
AGAGATAGGAAGCAGTGAAA+GGG - chr1_2:76841068-76841087 None:intergenic 40.0%
AAGAGATAGGAAGCAGTGAA+AGG - chr1_2:76841069-76841088 None:intergenic 40.0%
TTTCACTGCTTCCTATCTCT+TGG + chr1_2:76841068-76841087 Msa0093820:CDS 40.0%
AGAATCAGCATCCAAGAGAT+AGG - chr1_2:76841082-76841101 None:intergenic 40.0%
!! ATCTCTTGGATGCTGATTCT+TGG + chr1_2:76841082-76841101 Msa0093820:CDS 40.0%
ATAATCTCCACTCCCATCCT+TGG - chr1_2:76836451-76836470 None:intergenic 45.0%
CTATCAGAAATGCCCCTGAT+TGG + chr1_2:76836487-76836506 Msa0093820:CDS 45.0%
!! AAGGTTGGTGACTCCAATCA+GGG - chr1_2:76836503-76836522 None:intergenic 45.0%
!! TAAGGTTGGTGACTCCAATC+AGG - chr1_2:76836504-76836523 None:intergenic 45.0%
TGTGGTTTGAACCATGACCT+AGG - chr1_2:76836599-76836618 None:intergenic 45.0%
! GGTGAGCAACAAGTATTGTG+TGG - chr1_2:76836617-76836636 None:intergenic 45.0%
CACCAAAATGGTTCCACCAT+AGG + chr1_2:76836633-76836652 Msa0093820:CDS 45.0%
CTCCATGCATGTTCTATGAG+TGG - chr1_2:76836962-76836981 None:intergenic 45.0%
CTCAACCTACCTAAACCATG+TGG + chr1_2:76837220-76837239 Msa0093820:intron 45.0%
TCTCTCCACATGGTTTAGGT+AGG - chr1_2:76837228-76837247 None:intergenic 45.0%
TACCTAAACCATGTGGAGAG+AGG + chr1_2:76837227-76837246 Msa0093820:intron 45.0%
ACCTAAACCATGTGGAGAGA+GGG + chr1_2:76837228-76837247 Msa0093820:intron 45.0%
TCCCTCTCTCTACATGGTTT+AGG - chr1_2:76837422-76837441 None:intergenic 45.0%
TAGAGCTCTACTTACTGCCT+AGG - chr1_2:76837497-76837516 None:intergenic 45.0%
! CGACCCATTAGCCCATATTT+TGG + chr1_2:76837527-76837546 Msa0093820:intron 45.0%
! CGACCCAAAATATGGGCTAA+TGG - chr1_2:76837534-76837553 None:intergenic 45.0%
AAAACTAGCCCAAATGCGCT+CGG + chr1_2:76837562-76837581 Msa0093820:intron 45.0%
AAAAAAGCCCGAGCGCATTT+GGG - chr1_2:76837573-76837592 None:intergenic 45.0%
!!! TTTTTTGGCCCAAGCCCATT+TGG + chr1_2:76837587-76837606 Msa0093820:intron 45.0%
! TATATGGGCCAAATGGGCTT+GGG - chr1_2:76837598-76837617 None:intergenic 45.0%
! TTATATGGGCCAAATGGGCT+TGG - chr1_2:76837599-76837618 None:intergenic 45.0%
!!! CGGCCCAACCCTTTTTTATA+TGG - chr1_2:76837614-76837633 None:intergenic 45.0%
AAAATAAAACGGGTCGTGCC+GGG + chr1_2:76838116-76838135 Msa0093820:intron 45.0%
ATCTGCGGCCCAATTATAAC+AGG + chr1_2:76838177-76838196 Msa0093820:intron 45.0%
TCTGCGGCCCAATTATAACA+GGG + chr1_2:76838178-76838197 Msa0093820:intron 45.0%
GAGTAGCTAAATACACCCTC+TGG + chr1_2:76838862-76838881 Msa0093820:intron 45.0%
AGCAACTTAAAAGGAGTGGC+AGG + chr1_2:76839404-76839423 Msa0093820:intron 45.0%
!!! TTTCTACATTTTGGGGTGCG+GGG - chr1_2:76839486-76839505 None:intergenic 45.0%
ACCGAATTGGGTCTTACATC+TGG + chr1_2:76839604-76839623 Msa0093820:intron 45.0%
! GTTTTGCAAGTGTGCCTACT+AGG - chr1_2:76839640-76839659 None:intergenic 45.0%
ATGCATCTAATTGGACCAGG+TGG - chr1_2:76839772-76839791 None:intergenic 45.0%
CACATGCATCTAATTGGACC+AGG - chr1_2:76839775-76839794 None:intergenic 45.0%
CTGGTCCAATTAGATGCATG+TGG + chr1_2:76839773-76839792 Msa0093820:intron 45.0%
ATCCCGAATGTGTGATTGTG+TGG + chr1_2:76839963-76839982 Msa0093820:intron 45.0%
CGAATGTGTGATTGTGTGGA+AGG + chr1_2:76839967-76839986 Msa0093820:intron 45.0%
TGTGTGATTGTGTGGAAGGT+TGG + chr1_2:76839971-76839990 Msa0093820:intron 45.0%
TGGTATAACTCTAGCGTGGA+GGG - chr1_2:76840206-76840225 None:intergenic 45.0%
! GTTATACCACACGCTAGTCT+TGG + chr1_2:76840217-76840236 Msa0093820:intron 45.0%
TCCCCATGACAAAAAGAAGG+AGG + chr1_2:76840367-76840386 Msa0093820:intron 45.0%
! CCACCTCCTTCTTTTTGTCA+TGG - chr1_2:76840373-76840392 None:intergenic 45.0%
CCATGACAAAAAGAAGGAGG+TGG + chr1_2:76840370-76840389 Msa0093820:intron 45.0%
CACAGTCTCCAATCAGAGTT+TGG - chr1_2:76840430-76840449 None:intergenic 45.0%
GGGTTCATGGCTCAAAACAT+TGG + chr1_2:76840478-76840497 Msa0093820:CDS 45.0%
! AAACAGCCCATAAGGTGTCT+TGG - chr1_2:76840600-76840619 None:intergenic 45.0%
CGCTGTATTTCAAGACTGCA+TGG + chr1_2:76840687-76840706 Msa0093820:CDS 45.0%
GTTCTCATCTTCAGGTGACA+TGG - chr1_2:76840809-76840828 None:intergenic 45.0%
! TCAGAGGTGCATGCAACATT+AGG + chr1_2:76840835-76840854 Msa0093820:CDS 45.0%
ATGCAACATTAGGTCGTCCT+TGG + chr1_2:76840845-76840864 Msa0093820:CDS 45.0%
AACATTAGGTCGTCCTTGGA+GGG + chr1_2:76840849-76840868 Msa0093820:CDS 45.0%
ACTGTAGAATATGCCCTCCA+AGG - chr1_2:76840865-76840884 None:intergenic 45.0%
! TTGGAGGGCATATTCTACAG+TGG + chr1_2:76840864-76840883 Msa0093820:CDS 45.0%
GATTCCATGGTTGATCCTAG+AGG + chr1_2:76840907-76840926 Msa0093820:CDS 45.0%
CATGGTTGATCCTAGAGGTT+GGG + chr1_2:76840912-76840931 Msa0093820:CDS 45.0%
TTGATCCTAGAGGTTGGGAA+GGG + chr1_2:76840917-76840936 Msa0093820:CDS 45.0%
CTACCATCAGTGTTAGATCC+AGG - chr1_2:76840997-76841016 None:intergenic 45.0%
ACACTGATGGTAGAGTGGAT+TGG + chr1_2:76841004-76841023 Msa0093820:CDS 45.0%
TTGCCAAGAACTGTAACACC+AGG - chr1_2:76841030-76841049 None:intergenic 45.0%
!! GTGAAAGGGAGTGCTTTGTT+TGG - chr1_2:76841054-76841073 None:intergenic 45.0%
GATTCTTGGATTCCCTCTAC+AGG + chr1_2:76841096-76841115 Msa0093820:CDS 45.0%
TGATAGGGAACACCTGTAGA+GGG - chr1_2:76841111-76841130 None:intergenic 45.0%
ATGATAGGGAACACCTGTAG+AGG - chr1_2:76841112-76841131 None:intergenic 45.0%
!! AAATTAATATAAATTGATAA+TGG + chr1_2:76836857-76836876 Msa0093820:intron 5.0%
!!! AATTTAAAACTTATTAAAAA+AGG + chr1_2:76837730-76837749 Msa0093820:intron 5.0%
!!! ATTTAAAACTTATTAAAAAA+GGG + chr1_2:76837731-76837750 Msa0093820:intron 5.0%
!! AATATATAAAAATACATAAA+AGG + chr1_2:76838077-76838096 Msa0093820:intron 5.0%
!!! TAAATTTTAAAAAATAAAAC+GGG + chr1_2:76838106-76838125 Msa0093820:intron 5.0%
!! TAAAAACTATATATATATAT+TGG + chr1_2:76839024-76839043 Msa0093820:intron 5.0%
!! ATCTTAAATAAAAAATATTT+CGG - chr1_2:76839716-76839735 None:intergenic 5.0%
!! TAAAAATGTATTATAAAATA+TGG - chr1_2:76840246-76840265 None:intergenic 5.0%
TGCAGCAGCAGTGTTAGTGT+TGG + chr1_2:76836371-76836390 Msa0093820:CDS 50.0%
ATCGTATCCAAGGATGGGAG+TGG + chr1_2:76836441-76836460 Msa0093820:CDS 50.0%
!! AGGTTGGTGACTCCAATCAG+GGG - chr1_2:76836502-76836521 None:intergenic 50.0%
TCTCGTCCAATCCTACTGTG+GGG - chr1_2:76837055-76837074 None:intergenic 50.0%
CTCTCGTCCAATCCTACTGT+GGG - chr1_2:76837056-76837075 None:intergenic 50.0%
! CGCCCATCGGTCATCATTTT+AGG + chr1_2:76837101-76837120 Msa0093820:intron 50.0%
TCCCTCTCTCCACATGGTTT+AGG - chr1_2:76837232-76837251 None:intergenic 50.0%
TTCGGCCCGACCCAAAATAT+GGG - chr1_2:76837541-76837560 None:intergenic 50.0%
TTTCGGCCCGACCCAAAATA+TGG - chr1_2:76837542-76837561 None:intergenic 50.0%
AAACTAGCCCAAATGCGCTC+GGG + chr1_2:76837563-76837582 Msa0093820:intron 50.0%
CAAAAAAGCCCGAGCGCATT+TGG - chr1_2:76837574-76837593 None:intergenic 50.0%
!!! CAAATGCGCTCGGGCTTTTT+TGG + chr1_2:76837572-76837591 Msa0093820:intron 50.0%
GGGCCAGCCCTGTTATAATT+GGG - chr1_2:76838188-76838207 None:intergenic 50.0%
TGGGCCAGCCCTGTTATAAT+TGG - chr1_2:76838189-76838208 None:intergenic 50.0%
AGAGGCCCGACTGCATAAAT+GGG - chr1_2:76838208-76838227 None:intergenic 50.0%
ATTTATGCAGTCGGGCCTCT+CGG + chr1_2:76838208-76838227 Msa0093820:intron 50.0%
!! AGGTGTCAAATGGGTTGACC+CGG - chr1_2:76838250-76838269 None:intergenic 50.0%
! GGCACCTTTGGCTCCTTAAA+AGG - chr1_2:76838304-76838323 None:intergenic 50.0%
TAAGAGTTATGCGGGTTCGC+TGG + chr1_2:76838561-76838580 Msa0093820:intron 50.0%
AAGAGTTATGCGGGTTCGCT+GGG + chr1_2:76838562-76838581 Msa0093820:intron 50.0%
GTGGTATAACTCTAGCGTGG+AGG - chr1_2:76840207-76840226 None:intergenic 50.0%
CGTGTGGTATAACTCTAGCG+TGG - chr1_2:76840210-76840229 None:intergenic 50.0%
TGGATTCCAAGACTAGCGTG+TGG - chr1_2:76840226-76840245 None:intergenic 50.0%
GTGAATCGTGCAGACATTCG+TGG + chr1_2:76840451-76840470 Msa0093820:intron 50.0%
GTGCAGACATTCGTGGAGAA+GGG + chr1_2:76840458-76840477 Msa0093820:intron 50.0%
CATTCGTGGAGAAGGGTTCA+TGG + chr1_2:76840465-76840484 Msa0093820:CDS 50.0%
GGAATCCTTGGATGGAGCAT+TGG - chr1_2:76840579-76840598 None:intergenic 50.0%
GGTGTCTTGGAATCCTTGGA+TGG - chr1_2:76840587-76840606 None:intergenic 50.0%
! GACACCTTATGGGCTGTTTC+CGG + chr1_2:76840601-76840620 Msa0093820:CDS 50.0%
TCTACCGGAAACAGCCCATA+AGG - chr1_2:76840608-76840627 None:intergenic 50.0%
!! GGCACTGTCGACTTCATCTA+CGG + chr1_2:76840655-76840674 Msa0093820:CDS 50.0%
TGGACTTTCACGTGACTGTG+CGG - chr1_2:76840746-76840765 None:intergenic 50.0%
CAACATTAGGTCGTCCTTGG+AGG + chr1_2:76840848-76840867 Msa0093820:CDS 50.0%
!! CCAACCTCTAGGATCAACCA+TGG - chr1_2:76840914-76840933 None:intergenic 50.0%
CCATGGTTGATCCTAGAGGT+TGG + chr1_2:76840911-76840930 Msa0093820:CDS 50.0%
GTTGATCCTAGAGGTTGGGA+AGG + chr1_2:76840916-76840935 Msa0093820:CDS 50.0%
GGACCTGGATCTAACACTGA+TGG + chr1_2:76840991-76841010 Msa0093820:CDS 50.0%
!! TGGCCTGGTGTTACAGTTCT+TGG + chr1_2:76841024-76841043 Msa0093820:CDS 50.0%
ACTCTCTCGAACCCCACAGT+AGG + chr1_2:76837041-76837060 Msa0093820:intron 55.0%
CTCGAACCCCACAGTAGGAT+TGG + chr1_2:76837046-76837065 Msa0093820:intron 55.0%
GCTCTCGTCCAATCCTACTG+TGG - chr1_2:76837057-76837076 None:intergenic 55.0%
CCTGCATCCCTCTCTCTACA+TGG - chr1_2:76837428-76837447 None:intergenic 55.0%
CCATGTAGAGAGAGGGATGC+AGG + chr1_2:76837425-76837444 Msa0093820:intron 55.0%
AAAAAAGGGTTGGGCCGGAC+TGG + chr1_2:76837617-76837636 Msa0093820:intron 55.0%
CAATGCTCGATCAGCCAGTC+CGG - chr1_2:76837634-76837653 None:intergenic 55.0%
!! GGACTGGCTGATCGAGCATT+GGG + chr1_2:76837633-76837652 Msa0093820:intron 55.0%
AAAAAGGGGTTGGGTCGGAC+CGG + chr1_2:76837746-76837765 Msa0093820:intron 55.0%
! GGACCGGATCATCGGGTTTT+GGG + chr1_2:76837762-76837781 Msa0093820:intron 55.0%
TGGCCCAAAACCCGATGATC+CGG - chr1_2:76837768-76837787 None:intergenic 55.0%
AGGTCGGGCTCAAGAATCTG+CGG + chr1_2:76838162-76838181 Msa0093820:intron 55.0%
CGGCCCAATTATAACAGGGC+TGG + chr1_2:76838182-76838201 Msa0093820:intron 55.0%
! GGCTGGCCCATTTATGCAGT+CGG + chr1_2:76838199-76838218 Msa0093820:intron 55.0%
GCTGGCCCATTTATGCAGTC+GGG + chr1_2:76838200-76838219 Msa0093820:intron 55.0%
GAGAGGCCCGACTGCATAAA+TGG - chr1_2:76838209-76838228 None:intergenic 55.0%
TTTATGCAGTCGGGCCTCTC+GGG + chr1_2:76838209-76838228 Msa0093820:intron 55.0%
TAGCATCGTCGCTGGTACCA+AGG - chr1_2:76838354-76838373 None:intergenic 55.0%
CACCTTATAGCTGTGCCACC+TGG + chr1_2:76839754-76839773 Msa0093820:intron 55.0%
GACCAGGTGGCACAGCTATA+AGG - chr1_2:76839759-76839778 None:intergenic 55.0%
CGTGCAGACATTCGTGGAGA+AGG + chr1_2:76840457-76840476 Msa0093820:intron 55.0%
TGCAGTGGCTGTTCGAAACG+AGG + chr1_2:76840534-76840553 Msa0093820:CDS 55.0%
GACATCCCTTCCCAACCTCT+AGG - chr1_2:76840925-76840944 None:intergenic 55.0%
AGAGGTTGGGAAGGGATGTC+TGG + chr1_2:76840925-76840944 Msa0093820:CDS 55.0%
!! GATGGTAGAGTGGATTGGCC+TGG + chr1_2:76841009-76841028 Msa0093820:CDS 55.0%
CCTGCATCCCTCTCTCCACA+TGG - chr1_2:76837238-76837257 None:intergenic 60.0%
CCATGTGGAGAGAGGGATGC+AGG + chr1_2:76837235-76837254 Msa0093820:intron 60.0%
!! CGGACTGGCTGATCGAGCAT+TGG + chr1_2:76837632-76837651 Msa0093820:intron 60.0%
GTTGGGTCGGACCGGATCAT+CGG + chr1_2:76837754-76837773 Msa0093820:intron 60.0%
TTGGGTCGGACCGGATCATC+GGG + chr1_2:76837755-76837774 Msa0093820:intron 60.0%
! CGGACCGGATCATCGGGTTT+TGG + chr1_2:76837761-76837780 Msa0093820:intron 60.0%
GCAGATTCTTGAGCCCGACC+TGG - chr1_2:76838163-76838182 None:intergenic 60.0%
GAGGGATGTCGTGGCACCTT+TGG - chr1_2:76838316-76838335 None:intergenic 60.0%
! GCTAGATGCAAGCGCTGCAG+TGG + chr1_2:76840519-76840538 Msa0093820:CDS 60.0%
TAAAACGGGTCGTGCCGGGC+TGG + chr1_2:76838120-76838139 Msa0093820:intron 65.0%
ACCTGGCCTGTGTGGGCCAT+GGG - chr1_2:76838146-76838165 None:intergenic 65.0%
ATGGCCCACACAGGCCAGGT+CGG + chr1_2:76838146-76838165 Msa0093820:intron 65.0%
GACCTGGCCTGTGTGGGCCA+TGG - chr1_2:76838147-76838166 None:intergenic 70.0%
TGGCCCACACAGGCCAGGTC+GGG + chr1_2:76838147-76838166 Msa0093820:intron 70.0%
GAGCCCGACCTGGCCTGTGT+GGG - chr1_2:76838153-76838172 None:intergenic 70.0%
TGAGCCCGACCTGGCCTGTG+TGG - chr1_2:76838154-76838173 None:intergenic 70.0%
TGACCCGGTCTAGCCCGACC+TGG - chr1_2:76838235-76838254 None:intergenic 70.0%
GTGTGGGCCATGGGCCAGCC+CGG - chr1_2:76838137-76838156 None:intergenic 75.0%
! GGCTGGCCCATGGCCCACAC+AGG + chr1_2:76838137-76838156 Msa0093820:intron 75.0%
GCCCATGGCCCACACAGGCC+AGG + chr1_2:76838142-76838161 Msa0093820:intron 75.0%
TCGGGCCTCTCGGGCCAGGT+CGG + chr1_2:76838218-76838237 Msa0093820:intron 75.0%
CTAGCCCGACCTGGCCCGAG+AGG - chr1_2:76838226-76838245 None:intergenic 75.0%
! CGGGCCAGGTCGGGCTAGAC+CGG + chr1_2:76838228-76838247 Msa0093820:intron 75.0%
! GGGCCAGGTCGGGCTAGACC+GGG + chr1_2:76838229-76838248 Msa0093820:intron 75.0%
!!! GGTCGTGCCGGGCTGGCCCA+TGG + chr1_2:76838127-76838146 Msa0093820:intron 80.0%
! GCAGTCGGGCCTCTCGGGCC+AGG + chr1_2:76838214-76838233 Msa0093820:intron 80.0%
! CGGGCCTCTCGGGCCAGGTC+GGG + chr1_2:76838219-76838238 Msa0093820:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 76836366 76841143 76836366 ID=Msa0093820;Name=Msa0093820
chr1_2 mRNA 76836366 76841143 76836366 ID=Msa0093820-mRNA-1;Parent=Msa0093820;Name=Msa0093820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|322
chr1_2 exon 76836366 76836654 76836366 ID=Msa0093820-mRNA-1:exon:27125;Parent=Msa0093820-mRNA-1
chr1_2 exon 76840464 76841143 76840464 ID=Msa0093820-mRNA-1:exon:27126;Parent=Msa0093820-mRNA-1
chr1_2 CDS 76836366 76836654 76836366 ID=Msa0093820-mRNA-1:cds;Parent=Msa0093820-mRNA-1
chr1_2 CDS 76840464 76841143 76840464 ID=Msa0093820-mRNA-1:cds;Parent=Msa0093820-mRNA-1
Gene Sequence

>Msa0093820

ATGGATGCAGCAGCAGTGTTAGTGTTGGTGATCTTGTTCCTTAAAGCATTGTGTTCCAATGGTACAATTAATATTATCGTATCCAAGGATGGGAGTGGAGATTATACAAGTGTGGGTGAAGCTATCAGAAATGCCCCTGATTGGAGTCACCAACCTTACATCGTTCACGTTTTAGCAGGCATTTATGAAGAGTACATCTTCATTCCACCGAGTAAGATTAATATTAAGCTCCTAGGTCATGGTTCAAACCACACAATACTTGTTGCTCACCAAAATGGTTCCACCATAGACATTCGTGGAGAAGGGTTCATGGCTCAAAACATTGGATTTGTGAACACAGCGGAGCTAGATGCAAGCGCTGCAGTGGCTGTTCGAAACGAGGCAAACAACAGCATATTTTTCCAATGCTCCATCCAAGGATTCCAAGACACCTTATGGGCTGTTTCCGGTAGACAATTCTACAAAAACTGTGAAATCTATGGCACTGTCGACTTCATCTACGGCAACGCTGCCGCTGTATTTCAAGACTGCATGGTTTATGCACGCTATCGACAGTTTGTGACATTCACCGCACAGTCACGTGAAAGTCCATATGAAAAAACAGGTTTCACATTCCAACGTTGTAAATTCACCATGTCACCTGAAGATGAGAACAGAAAGTCAGAGGTGCATGCAACATTAGGTCGTCCTTGGAGGGCATATTCTACAGTGGCTATATTGCATTGTTTCATAGATTCCATGGTTGATCCTAGAGGTTGGGAAGGGATGTCTGGTCTGCCCACTGATAAAGTTACTTATGTTGAGTTTGAGAATTTTGGACCTGGATCTAACACTGATGGTAGAGTGGATTGGCCTGGTGTTACAGTTCTTGGCAACCCAAACAAAGCACTCCCTTTCACTGCTTCCTATCTCTTGGATGCTGATTCTTGGATTCCCTCTACAGGTGTTCCCTATCATAGTGAACTATAA
Protein sequence

>Msa0093820

MDAAAVLVLVILFLKALCSNGTINIIVSKDGSGDYTSVGEAIRNAPDWSHQPYIVHVLAGIYEEYIFIPPSKINIKLLGHGSNHTILVAHQNGSTIDIRGEGFMAQNIGFVNTAELDASAAVAVRNEANNSIFFQCSIQGFQDTLWAVSGRQFYKNCEIYGTVDFIYGNAAAVFQDCMVYARYRQFVTFTAQSRESPYEKTGFTFQRCKFTMSPEDENRKSEVHATLGRPWRAYSTVAILHCFIDSMVDPRGWEGMSGLPTDKVTYVEFENFGPGSNTDGRVDWPGVTVLGNPNKALPFTASYLLDADSWIPSTGVPYHSEL*