AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0341730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341730 MtrunA17_Chr4g0000461 80.727 550 90 4 11 558 9 544 0.0 892
Msa0341730 MtrunA17_Chr5g0395431 65.399 552 176 3 3 552 45 583 0.0 741
Msa0341730 MtrunA17_Chr4g0072561 64.919 553 178 5 6 556 10 548 0.0 729
Msa0341730 MtrunA17_Chr2g0334131 98.601 286 4 0 273 558 1 286 0.0 579
Msa0341730 MtrunA17_Chr4g0028411 41.530 549 299 8 13 556 11 542 1.04e-143 426
Msa0341730 MtrunA17_Chr3g0102411 39.020 551 308 8 8 552 9 537 2.85e-140 417
Msa0341730 MtrunA17_Chr2g0327341 42.037 540 290 9 13 548 11 531 9.03e-134 400
Msa0341730 MtrunA17_Chr2g0334121 88.837 215 12 4 3 214 2 207 3.22e-130 378
Msa0341730 MtrunA17_Chr1g0157401 39.741 541 307 7 13 548 26 552 1.24e-120 367
Msa0341730 MtrunA17_Chr1g0180551 39.560 546 309 10 12 548 80 613 3.36e-116 357
Msa0341730 MtrunA17_Chr1g0197391 39.453 512 282 8 42 548 70 558 1.29e-110 341
Msa0341730 MtrunA17_Chr3g0116271 39.726 511 274 9 45 548 67 550 1.79e-110 341
Msa0341730 MtrunA17_Chr4g0039791 40.974 493 273 9 65 554 82 559 2.06e-110 340
Msa0341730 MtrunA17_Chr1g0180541 38.447 528 300 10 29 548 30 540 2.16e-110 340
Msa0341730 MtrunA17_Chr5g0409771 39.648 512 281 11 45 549 58 548 4.48e-109 337
Msa0341730 MtrunA17_Chr5g0409791 41.036 502 270 10 65 554 79 566 1.97e-105 328
Msa0341730 MtrunA17_Chr3g0116251 39.181 513 271 11 45 548 68 548 1.99e-103 322
Msa0341730 MtrunA17_Chr8g0353341 37.958 519 295 10 13 519 23 526 2.50e-103 321
Msa0341730 MtrunA17_Chr1g0186071 36.842 513 292 9 42 552 70 552 1.25e-92 294
Msa0341730 MtrunA17_Chr5g0433241 29.061 554 342 19 25 549 10 541 5.53e-52 186
Msa0341730 MtrunA17_Chr3g0109731 28.755 546 336 15 38 551 25 549 2.11e-51 185
Msa0341730 MtrunA17_Chr6g0471921 28.773 497 324 14 56 546 33 505 3.34e-48 175
Msa0341730 MtrunA17_Chr5g0433231 29.297 512 296 18 75 549 60 542 1.79e-42 160
Msa0341730 MtrunA17_Chr5g0396331 27.704 527 324 18 55 554 40 536 4.45e-42 159
Msa0341730 MtrunA17_Chr1g0157431 31.343 335 219 4 13 344 26 352 1.83e-41 157
Msa0341730 MtrunA17_Chr8g0370701 28.599 521 331 17 55 554 82 582 1.84e-40 155
Msa0341730 MtrunA17_Chr5g0396311 27.379 515 345 15 54 554 39 538 7.04e-40 152
Msa0341730 MtrunA17_Chr5g0433221 28.571 511 301 18 75 549 60 542 1.96e-38 149
Msa0341730 MtrunA17_Chr6g0471311 32.011 378 220 14 193 549 183 544 5.51e-38 147
Msa0341730 MtrunA17_Chr8g0370731 28.195 493 315 17 82 554 20 493 4.57e-36 141
Msa0341730 MtrunA17_Chr2g0301671 26.038 530 338 19 55 551 46 554 4.44e-34 136
Msa0341730 MtrunA17_Chr2g0292471 27.675 542 316 19 67 556 40 557 1.06e-33 135
Msa0341730 MtrunA17_Chr7g0252691 24.381 525 335 17 66 549 217 720 3.53e-33 134
Msa0341730 MtrunA17_Chr4g0028451 53.704 108 40 2 413 520 10 107 9.20e-31 115
Msa0341730 MtrunA17_Chr4g0068151 26.394 538 326 20 55 551 46 554 1.69e-30 125
Msa0341730 MtrunA17_Chr5g0406681 24.909 550 374 20 25 554 37 567 9.45e-30 123
Msa0341730 MtrunA17_Chr1g0205711 26.008 496 281 19 34 468 94 564 1.53e-27 117
Msa0341730 MtrunA17_Chr4g0004101 23.765 324 212 10 252 549 10 324 1.76e-20 92.8
Msa0341730 MtrunA17_Chr3g0120731 28.446 341 167 13 198 473 283 611 3.39e-19 91.7
Msa0341730 MtrunA17_Chr3g0121951 30.483 269 134 11 322 551 451 705 7.50e-19 90.5
Msa0341730 MtrunA17_Chr1g0162621 26.934 349 188 14 187 482 214 548 1.96e-18 89.0
Msa0341730 MtrunA17_Chr8g0377991 30.712 267 138 10 322 551 458 714 2.88e-18 88.6
Msa0341730 MtrunA17_Chr3g0121931 28.839 267 142 9 322 551 455 710 5.79e-18 87.8
Msa0341730 MtrunA17_Chr4g0004841 26.038 265 174 9 304 554 82 338 1.85e-17 84.0
Msa0341730 MtrunA17_Chr4g0034181 23.139 497 297 19 49 482 72 546 2.02e-17 85.9
Msa0341730 MtrunA17_Chr8g0351251 22.265 521 328 16 66 543 130 616 4.21e-17 85.5
Msa0341730 MtrunA17_Chr5g0396711 27.273 363 191 16 176 482 204 549 1.11e-16 83.6
Msa0341730 MtrunA17_Chr8g0388081 26.316 342 188 14 184 473 150 479 1.27e-16 83.2
Msa0341730 MtrunA17_Chr7g0270221 36.095 169 99 7 317 482 346 508 1.93e-16 82.8
Msa0341730 MtrunA17_Chr1g0194371 35.882 170 98 8 317 482 386 548 1.08e-15 80.5
Msa0341730 MtrunA17_Chr4g0033141 22.925 506 318 19 17 468 481 968 4.61e-15 79.0
Msa0341730 MtrunA17_Chr5g0396691 27.688 372 192 18 176 489 204 556 1.61e-14 76.6
Msa0341730 MtrunA17_Chr2g0329161 25.498 502 308 22 16 468 481 965 2.15e-14 77.0
Msa0341730 MtrunA17_Chr1g0160041 32.164 171 102 6 317 479 421 585 4.31e-13 72.0
Msa0341730 MtrunA17_Chr3g0124631 32.184 174 98 8 317 479 423 587 3.66e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341730 AT3G21240.1 69.134 554 154 6 6 556 15 554 0.0 786
Msa0341730 AT1G51680.1 68.262 564 157 6 1 556 12 561 0.0 759
Msa0341730 AT1G65060.1 63.187 546 184 4 10 553 31 561 0.0 702
Msa0341730 AT1G51680.3 67.424 528 150 6 1 520 12 525 0.0 698
Msa0341730 AT3G21240.2 68.607 481 135 5 6 483 15 482 0.0 678
Msa0341730 AT3G21240.3 68.607 481 135 5 6 483 15 482 0.0 678
Msa0341730 AT3G21230.1 60.806 546 203 4 11 552 26 564 0.0 666
Msa0341730 AT1G51680.2 67.821 491 137 5 1 483 12 489 0.0 652
Msa0341730 AT3G21230.3 59.238 525 199 5 11 531 26 539 0.0 619
Msa0341730 AT3G21230.2 59.129 482 187 3 6 483 21 496 0.0 573
Msa0341730 AT1G65060.2 61.926 457 158 3 10 464 31 473 0.0 573
Msa0341730 AT3G21230.4 56.020 407 169 3 11 413 26 426 7.57e-155 451
Msa0341730 AT4G05160.1 41.252 543 295 8 13 548 11 536 3.78e-136 406
Msa0341730 AT1G62940.1 40.325 553 307 6 4 552 3 536 2.48e-132 397
Msa0341730 AT1G20510.1 39.479 537 306 7 14 548 17 536 7.54e-121 367
Msa0341730 AT1G20480.1 40.370 540 303 8 13 548 33 557 1.05e-119 365
Msa0341730 AT1G20500.1 37.407 540 313 8 14 548 23 542 1.84e-112 346
Msa0341730 AT4G19010.1 37.843 547 322 7 13 556 31 562 3.17e-111 343
Msa0341730 AT5G63380.1 39.096 509 277 11 46 548 69 550 4.65e-110 340
Msa0341730 AT5G38120.1 37.017 543 320 10 9 548 19 542 4.68e-107 332
Msa0341730 AT1G20510.2 37.844 473 276 6 14 484 17 473 4.11e-96 301
Msa0341730 AT5G38120.3 34.528 530 297 11 9 521 19 515 8.14e-93 294
Msa0341730 AT5G38120.4 34.280 493 275 10 9 484 19 479 5.17e-84 270
Msa0341730 AT5G38120.2 34.280 493 275 10 9 484 19 479 5.17e-84 270
Msa0341730 AT1G20510.3 35.698 451 272 6 14 462 17 451 2.74e-81 262
Msa0341730 AT1G20490.2 30.118 425 271 7 14 431 23 428 2.84e-57 198
Msa0341730 AT1G20490.1 30.118 425 271 7 14 431 23 428 2.84e-57 198
Msa0341730 AT5G16340.1 31.721 517 314 15 54 549 40 538 4.13e-57 200
Msa0341730 AT5G16370.1 31.335 517 316 15 54 549 40 538 9.80e-56 197
Msa0341730 AT1G21540.1 28.807 545 344 18 38 557 25 550 9.78e-52 186
Msa0341730 AT1G77240.1 28.889 540 345 15 38 557 25 545 4.09e-51 184
Msa0341730 AT3G48990.1 30.924 498 305 14 58 546 37 504 1.78e-50 182
Msa0341730 AT1G21530.2 27.726 541 339 15 38 549 25 542 1.74e-49 179
Msa0341730 AT1G21530.1 28.125 544 331 17 38 549 25 540 1.62e-48 177
Msa0341730 AT1G75960.1 29.207 517 327 15 54 549 40 538 5.31e-46 170
Msa0341730 AT1G65880.1 27.119 531 331 18 55 549 40 550 2.89e-42 160
Msa0341730 AT1G65890.1 26.996 526 337 18 55 549 40 549 4.02e-42 159
Msa0341730 AT1G20560.1 25.912 521 347 15 55 554 42 544 3.35e-41 157
Msa0341730 AT1G30520.2 28.242 563 334 20 42 552 5 549 3.77e-39 151
Msa0341730 AT1G30520.1 28.242 563 334 20 42 552 5 549 3.77e-39 151
Msa0341730 AT1G76290.1 26.374 546 364 15 25 553 10 534 5.54e-39 150
Msa0341730 AT1G66120.1 26.796 515 323 17 66 549 51 542 3.30e-38 148
Msa0341730 AT1G68270.1 26.706 513 305 18 66 550 51 520 2.75e-37 145
Msa0341730 AT3G16910.1 26.071 537 334 21 53 551 46 557 2.93e-37 145
Msa0341730 AT3G16170.1 24.852 507 326 10 74 552 125 604 4.43e-37 145
Msa0341730 AT1G20560.2 25.261 479 319 15 97 554 6 466 6.58e-32 129
Msa0341730 AT2G17650.1 25.000 524 352 15 55 551 87 596 1.30e-30 126
Msa0341730 AT1G30520.3 28.000 475 286 17 42 479 5 460 1.21e-29 122
Msa0341730 AT1G30520.4 28.000 475 286 17 42 479 5 460 1.21e-29 122
Msa0341730 AT5G36880.2 23.178 535 349 18 56 549 199 712 1.22e-28 121
Msa0341730 AT5G36880.6 23.178 535 349 18 56 549 149 662 1.41e-28 120
Msa0341730 AT5G36880.3 23.178 535 349 18 56 549 149 662 1.41e-28 120
Msa0341730 AT5G36880.5 23.178 535 349 18 56 549 149 662 1.41e-28 120
Msa0341730 AT5G36880.1 23.178 535 349 18 56 549 149 662 1.41e-28 120
Msa0341730 AT5G27600.1 26.226 469 269 17 56 468 120 567 5.13e-26 113
Msa0341730 AT1G49430.1 25.301 498 274 21 56 482 81 551 1.62e-21 99.0
Msa0341730 AT5G36880.4 22.881 472 304 17 56 488 149 599 4.71e-21 97.4
Msa0341730 AT1G64400.1 24.797 492 287 18 43 470 66 538 1.77e-20 95.9
Msa0341730 AT4G23850.1 24.790 476 283 15 40 456 64 523 2.78e-20 95.1
Msa0341730 AT4G11030.1 24.431 483 286 17 48 468 71 536 1.65e-19 92.8
Msa0341730 AT2G47240.4 37.126 167 100 4 317 482 326 488 2.43e-17 85.9
Msa0341730 AT2G47240.1 37.126 167 100 4 317 482 385 547 2.79e-17 85.9
Msa0341730 AT2G47240.2 37.126 167 100 4 317 482 385 547 2.79e-17 85.9
Msa0341730 AT2G47240.3 37.126 167 100 4 317 482 385 547 2.79e-17 85.9
Msa0341730 AT3G05970.1 33.974 156 93 4 317 468 418 567 4.78e-16 82.0
Msa0341730 AT3G23790.1 38.931 131 64 5 315 439 446 566 4.41e-14 75.9
Msa0341730 AT1G77590.2 35.028 177 95 7 317 482 271 438 5.31e-14 75.1
Msa0341730 AT1G77590.1 35.028 177 95 7 317 482 417 584 6.16e-14 75.5
Msa0341730 AT4G14070.1 40.206 97 53 2 343 439 491 582 1.38e-13 74.3
Msa0341730 AT2G04350.2 31.280 211 120 9 317 514 446 644 9.47e-13 71.6
Msa0341730 AT2G04350.1 31.280 211 120 9 317 514 446 644 9.47e-13 71.6

Find 149 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTGTCTTCTCCTTTCT+TGG 0.132876 2_4:+63595798 Msa0341730:CDS
AACAGCAGCATCAGAAATTT+TGG 0.154865 2_4:-63600858 None:intergenic
AATGCATTTATGTCGAATTT+TGG 0.164797 2_4:-63596347 None:intergenic
TACACAACAAACGTGTAAAA+TGG 0.182507 2_4:+63601557 Msa0341730:three_prime_UTR
TTTGAAAATCTCTCCGAATT+TGG 0.187709 2_4:+63595627 Msa0341730:CDS
ACAAAATTCTGAATATTTAT+AGG 0.197521 2_4:-63601891 None:intergenic
TAATCTTCAATTCAATTAAA+TGG 0.199475 2_4:+63595509 Msa0341730:exon
AATCAAACTTGTTGAAATAT+TGG 0.216091 2_4:-63595445 None:intergenic
TGCCTCTGGTCTCAACAAAT+TGG 0.223893 2_4:+63595728 Msa0341730:CDS
CAACCAACCTTCTTTGTCTA+TGG 0.233625 2_4:-63600705 None:intergenic
AAATTTCCAAATGCAATTCT+TGG 0.233854 2_4:+63596539 Msa0341730:CDS
ATCATTGTTATTATCATCTA+TGG 0.247209 2_4:-63596024 None:intergenic
ACGTCCATAAGCGGAAAATT+TGG 0.253221 2_4:+63601740 Msa0341730:three_prime_UTR
CGTCCATAAGCGGAAAATTT+GGG 0.273990 2_4:+63601741 Msa0341730:three_prime_UTR
GTCCCAACACATAATGTTAT+TGG 0.276986 2_4:+63601776 Msa0341730:three_prime_UTR
ATACATCACCTTTCATGATT+TGG 0.282523 2_4:-63599284 None:intergenic
GAAGACAAATTCAGGGGAAT+TGG 0.295121 2_4:-63595787 None:intergenic
AGAAAGGAGAAGACAAATTC+AGG 0.295431 2_4:-63595795 None:intergenic
CAAAATTCTGAATATTTATA+GGG 0.311284 2_4:-63601890 None:intergenic
TCACTGCTGTAATATAGATT+TGG 0.311415 2_4:-63596227 None:intergenic
TGGTTGTATACAGGTGATAT+TGG 0.318824 2_4:+63600722 Msa0341730:CDS
TTCTTCACGGCTGCTGAGAT+TGG 0.321647 2_4:+63595861 Msa0341730:CDS
ATATGGGTTAATTAAGTAAA+TGG 0.325650 2_4:+63601866 Msa0341730:three_prime_UTR
AAGACAAATTCAGGGGAATT+GGG 0.331242 2_4:-63595786 None:intergenic
CTTGTAACTTATACATGATA+TGG 0.333790 2_4:-63601626 None:intergenic
GAATGAAGAGGTTGATGGTT+GGG 0.340363 2_4:-63595597 None:intergenic
AGTATGATCTGTCTTCAATT+AGG 0.346929 2_4:+63596459 Msa0341730:CDS
GTGGTAGGTGTAGACCTTTC+CGG 0.378024 2_4:-63595679 None:intergenic
TTTATAATAGCAAAGGATTA+CGG 0.378381 2_4:-63595347 None:intergenic
ACCTGTCCAAGAATTGCATT+TGG 0.379853 2_4:-63596545 None:intergenic
CTAGTTCTGTTCTGTTGTGT+CGG 0.385911 2_4:+63595418 Msa0341730:five_prime_UTR
ATTTAATTGAATTGAAGATT+AGG 0.387251 2_4:-63595507 None:intergenic
GGTTGTATACAGGTGATATT+GGG 0.389319 2_4:+63600723 Msa0341730:CDS
GAGACCAGAGGCAACTTTAC+GGG 0.392685 2_4:-63595718 None:intergenic
TGAGACCAGAGGCAACTTTA+CGG 0.399377 2_4:-63595719 None:intergenic
TGTGTTAACATCACCCCTTT+TGG 0.403886 2_4:-63596158 None:intergenic
TACCAATAACATTATGTGTT+GGG 0.410928 2_4:-63601778 None:intergenic
AGAGGTACCTGTTGCATTTG+TGG 0.414419 2_4:+63601032 Msa0341730:CDS
TCCAAATGCAATTCTTGGAC+AGG 0.420325 2_4:+63596544 Msa0341730:CDS
CGCAGCCAATCCTTTCTTCA+CGG 0.421321 2_4:+63595848 Msa0341730:CDS
TCATGATGACTTCACCTTGT+TGG 0.422072 2_4:-63595755 None:intergenic
AGCATAGCACAACAAGTAGA+TGG 0.423109 2_4:+63596197 Msa0341730:CDS
AGGATTGGCTGCGGTGGCTA+TGG 0.426235 2_4:-63595838 None:intergenic
TAGTTCTGTTCTGTTGTGTC+GGG 0.430364 2_4:+63595419 Msa0341730:five_prime_UTR
TATGATCAACTTGCTGTTGG+AGG 0.430827 2_4:-63595898 None:intergenic
GCCTCTGGTCTCAACAAATT+GGG 0.432715 2_4:+63595729 Msa0341730:CDS
TAAGCACTTTATCTCCAAAC+AGG 0.437851 2_4:+63601095 Msa0341730:CDS
TTATGCAGATTTCACCAGAT+TGG 0.438572 2_4:-63599254 None:intergenic
TTTCTTGGCGCTTCTTATCT+CGG 0.440411 2_4:+63595813 Msa0341730:CDS
ATTCATTGTTGATAGATTGA+AGG 0.440963 2_4:+63600769 Msa0341730:CDS
TCAATTAGGATATTGAAATC+AGG 0.443397 2_4:+63596473 Msa0341730:CDS
ACATGGACGTGAACCAAATT+CGG 0.447850 2_4:-63595640 None:intergenic
TGTTATGATCAACTTGCTGT+TGG 0.452440 2_4:-63595901 None:intergenic
GAGATAAGAAGCGCCAAGAA+AGG 0.452719 2_4:-63595811 None:intergenic
AATAAGAATGAAGAGGTTGA+TGG 0.454168 2_4:-63595602 None:intergenic
TTTGCTATTGCCAATACAAT+CGG 0.455057 2_4:-63596419 None:intergenic
GGTTGTTCCTCCGATTGTAT+TGG 0.455732 2_4:+63596409 Msa0341730:CDS
ACACAACAAACGTGTAAAAT+GGG 0.457086 2_4:+63601558 Msa0341730:three_prime_UTR
CCATATTCATCAGGAACAAC+AGG 0.457195 2_4:+63596131 Msa0341730:CDS
AAGAACTTGAAGAAACTGTT+AGG 0.460522 2_4:+63596513 Msa0341730:CDS
GAACAACAGGTCTACCAAAA+GGG 0.465151 2_4:+63596144 Msa0341730:CDS
TGGTTGGGGATGTATATGTC+TGG 0.465168 2_4:-63595582 None:intergenic
AGAAGAGCTTCAAGTTCAGC+TGG 0.466302 2_4:-63600824 None:intergenic
GCGCAACCACATCGTCTGGC+TGG 0.468437 2_4:-63596106 None:intergenic
TCTTTACCTCGAAACCAATC+TGG 0.470219 2_4:+63599240 Msa0341730:CDS
GGAACAACAGGTCTACCAAA+AGG 0.472109 2_4:+63596143 Msa0341730:CDS
GGTAAAGATTTACCAGTGTC+AGG 0.475114 2_4:-63599225 None:intergenic
TCTGGTGAAATCTGCATAAG+AGG 0.475587 2_4:+63599258 Msa0341730:CDS
TCTGGCTGGATCTTTGCATC+AGG 0.481369 2_4:-63596092 None:intergenic
GCAATTCCCAAGTCACCATC+AGG 0.482425 2_4:+63601470 Msa0341730:CDS
ATTTCACCAGATTGGTTTCG+AGG 0.484356 2_4:-63599246 None:intergenic
GATGTTAACACACAAAGGTT+TGG 0.484767 2_4:+63596169 Msa0341730:CDS
ATCTCAGCAGCCGTGAAGAA+AGG 0.485692 2_4:-63595858 None:intergenic
GCATTTGTGGTGAGATCAAA+TGG 0.485996 2_4:+63601045 Msa0341730:CDS
GATCTCACCACAAATGCAAC+AGG 0.486516 2_4:-63601039 None:intergenic
GGTGTAGACCTTTCCGGTGG+GGG 0.486788 2_4:-63595673 None:intergenic
GGCAGCGCAACCACATCGTC+TGG 0.487814 2_4:-63596110 None:intergenic
CCTGTTGTTCCTGATGAATA+TGG 0.488588 2_4:-63596131 None:intergenic
AATGAAGAGGTTGATGGTTG+GGG 0.493535 2_4:-63595596 None:intergenic
AATACAATCGGAGGAACAAC+CGG 0.493749 2_4:-63596407 None:intergenic
AAAGAAGGTTGGTTGTATAC+AGG 0.501330 2_4:+63600713 Msa0341730:CDS
GAACAACAATGATCATCATA+AGG 0.502896 2_4:+63595959 Msa0341730:CDS
GGATACGGAATGACTGAGGC+GGG 0.504464 2_4:+63599099 Msa0341730:CDS
GTTGCGCTGCCATATTCATC+AGG 0.505658 2_4:+63596122 Msa0341730:CDS
CAACTTTACGGGAGGTGAGT+TGG 0.510165 2_4:-63595707 None:intergenic
AGATCATACTTATTAAGATC+TGG 0.514615 2_4:-63596446 None:intergenic
GAAAGGAGAAGACAAATTCA+GGG 0.515403 2_4:-63595794 None:intergenic
TTGAATCTTGTTAACAAACA+TGG 0.516083 2_4:+63596371 Msa0341730:CDS
GGAGATGAAGAAGAAGGAGG+AGG 0.518367 2_4:-63595486 None:intergenic
ACCTCCCGTAAAGTTGCCTC+TGG 0.525134 2_4:+63595714 Msa0341730:CDS
AGATTAGGAGATGAAGAAGA+AGG 0.532050 2_4:-63595492 None:intergenic
TTGAGAGCAAAGCTAGCAGC+AGG 0.532670 2_4:+63601512 Msa0341730:CDS
TTACCAATAACATTATGTGT+TGG 0.535138 2_4:-63601779 None:intergenic
TAAACTCTAAAGCAAAACAT+TGG 0.536727 2_4:+63595388 Msa0341730:five_prime_UTR
TAGGTGTAGACCTTTCCGGT+GGG 0.538455 2_4:-63595675 None:intergenic
AGAATGAAGAGGTTGATGGT+TGG 0.539203 2_4:-63595598 None:intergenic
AATGGAACATTACAGGGATA+CGG 0.543669 2_4:+63599084 Msa0341730:intron
TCAAAACAATAAGAATGAAG+AGG 0.545720 2_4:-63595609 None:intergenic
AAATCAGGTGGTGCTCCACT+TGG 0.554196 2_4:+63596488 Msa0341730:CDS
TTGTTTATTTATAATAGCAA+AGG 0.557037 2_4:-63595354 None:intergenic
GAAGGATGAAGCGGCTGGAG+AGG 0.557352 2_4:+63601014 Msa0341730:CDS
TAAGGTGGTGGACGTGGTGT+TGG 0.560266 2_4:+63595977 Msa0341730:CDS
AGACAAATTCAGGGGAATTG+GGG 0.562809 2_4:-63595785 None:intergenic
GGTGAGTTGGACGTCGTGGT+AGG 0.564599 2_4:-63595694 None:intergenic
AAATGCAGAGATGAAGATTG+TGG 0.577117 2_4:+63599200 Msa0341730:CDS
TCTTCAAGTTCTTTACCAAG+TGG 0.577507 2_4:-63596503 None:intergenic
AACAAATTGGGACTCCAACA+AGG 0.578787 2_4:+63595741 Msa0341730:CDS
GAACCAGTGAATGTAAAAGC+AGG 0.579482 2_4:+63599156 Msa0341730:CDS
GAGAGAACCATAGACAAAGA+AGG 0.579648 2_4:+63600698 Msa0341730:CDS
AACATTATGTGTTGGGACGG+AGG 0.582608 2_4:-63601771 None:intergenic
AGAATGAAGGATGAAGCGGC+TGG 0.583246 2_4:+63601009 Msa0341730:intron
AGCAGCCGTGAAGAAAGGAT+TGG 0.591737 2_4:-63595853 None:intergenic
ATCAGGCAAAATCTTGCGCA+AGG 0.592909 2_4:+63601487 Msa0341730:CDS
TCATCATAAGGTGGTGGACG+TGG 0.596754 2_4:+63595971 Msa0341730:CDS
GTCCATAAGCGGAAAATTTG+GGG 0.597127 2_4:+63601742 Msa0341730:three_prime_UTR
AATAAATATGAAACAGAGGA+AGG 0.597536 2_4:-63596268 None:intergenic
AAGGAATTAATCAAATACAA+AGG 0.598333 2_4:+63600788 Msa0341730:CDS
ACATGGAGTAACAGTTGCAC+CGG 0.598451 2_4:+63596388 Msa0341730:CDS
AGTGAATAAATATGAAACAG+AGG 0.600973 2_4:-63596272 None:intergenic
AGGTGTAGACCTTTCCGGTG+GGG 0.602847 2_4:-63595674 None:intergenic
TCATATTATACGTCCATAAG+CGG 0.604571 2_4:+63601731 Msa0341730:three_prime_UTR
TTAGGAGATGAAGAAGAAGG+AGG 0.604883 2_4:-63595489 None:intergenic
CAAATTCAGGGGAATTGGGG+AGG 0.607545 2_4:-63595782 None:intergenic
GCTATTGCCAATACAATCGG+AGG 0.609677 2_4:-63596416 None:intergenic
AACAACAGGTCTACCAAAAG+GGG 0.613682 2_4:+63596145 Msa0341730:CDS
CAATGATCATCATAAGGTGG+TGG 0.614282 2_4:+63595965 Msa0341730:CDS
AAGATTGTGGATCCTGACAC+TGG 0.615148 2_4:+63599213 Msa0341730:CDS
AATAACATTATGTGTTGGGA+CGG 0.617150 2_4:-63601774 None:intergenic
GAAGAAAGGATTGGCTGCGG+TGG 0.618545 2_4:-63595844 None:intergenic
ATCATCTAAACAAGAAACAA+CGG 0.618932 2_4:+63595536 Msa0341730:CDS
GAACCATAGACAAAGAAGGT+TGG 0.619000 2_4:+63600702 Msa0341730:CDS
ATTAGGATATTGAAATCAGG+TGG 0.625319 2_4:+63596476 Msa0341730:CDS
AATGTAAAAGCAGGTGCATG+TGG 0.625412 2_4:+63599165 Msa0341730:CDS
GGGAGGTGAGTTGGACGTCG+TGG 0.627337 2_4:-63595698 None:intergenic
CGTGAAGAAAGGATTGGCTG+CGG 0.628277 2_4:-63595847 None:intergenic
TCCCAATTTGTTGAGACCAG+AGG 0.628756 2_4:-63595730 None:intergenic
AGAGGCGACCAAATCATGAA+AGG 0.629028 2_4:+63599276 Msa0341730:CDS
GGGGTGATGTTAACACACAA+AGG 0.631874 2_4:+63596164 Msa0341730:CDS
CAACAATGATCATCATAAGG+TGG 0.634698 2_4:+63595962 Msa0341730:CDS
GCTAAACTCATCGTTAACAC+TGG 0.639259 2_4:-63599123 None:intergenic
GGGATACGGAATGACTGAGG+CGG 0.641098 2_4:+63599098 Msa0341730:intron
GATACGGAATGACTGAGGCG+GGG 0.645430 2_4:+63599100 Msa0341730:CDS
GTAGGTGTAGACCTTTCCGG+TGG 0.649374 2_4:-63595676 None:intergenic
AAAGATCCAGCCAGACGATG+TGG 0.660185 2_4:+63596100 Msa0341730:CDS
TGTAAAATGGGAGATTCATG+TGG 0.666874 2_4:+63601570 Msa0341730:three_prime_UTR
AGGTTATCTAAATGATCGAG+AGG 0.669178 2_4:+63600670 Msa0341730:intron
ACCAGAGGCAACTTTACGGG+AGG 0.672242 2_4:-63595715 None:intergenic
AAAGGAGAAGACAAATTCAG+GGG 0.673821 2_4:-63595793 None:intergenic
ACAGGGATACGGAATGACTG+AGG 0.707818 2_4:+63599095 Msa0341730:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATATATATATATATA+TGG + chr2_4:63601849-63601868 Msa0341730:three_prime_UTR 0.0%
!! ATATATATATATATATATAT+GGG + chr2_4:63601850-63601869 Msa0341730:three_prime_UTR 0.0%
!!! TATTTTTTTCATTTTTTATC+GGG + chr2_4:63597590-63597609 Msa0341730:intron 10.0%
!!! CTTTTTATAATTTTTTTGAA+AGG + chr2_4:63597635-63597654 Msa0341730:intron 10.0%
!!! ATCAAGATAATTTTATTTAA+TGG + chr2_4:63597788-63597807 Msa0341730:intron 10.0%
!!! TCAAGATAATTTTATTTAAT+GGG + chr2_4:63597789-63597808 Msa0341730:intron 10.0%
!!! AAAATTTTCAAAAAAAATCT+TGG - chr2_4:63598193-63598212 None:intergenic 10.0%
!!! TTGAAAATTTTCTTATAAAT+AGG + chr2_4:63598202-63598221 Msa0341730:intron 10.0%
!! AGTTAATAGTAATTTATAAT+TGG + chr2_4:63598504-63598523 Msa0341730:intron 10.0%
!! GTTAATAGTAATTTATAATT+GGG + chr2_4:63598505-63598524 Msa0341730:intron 10.0%
!! GTGTATTAAATAAATAATAT+TGG + chr2_4:63598729-63598748 Msa0341730:intron 10.0%
!! TATTAAATAAATAATATTGG+TGG + chr2_4:63598732-63598751 Msa0341730:intron 10.0%
!! ATTAAATAAATAATATTGGT+GGG + chr2_4:63598733-63598752 Msa0341730:intron 10.0%
!!! TTTTAATAATAATACCTAAT+AGG - chr2_4:63598807-63598826 None:intergenic 10.0%
!! TTAATTAAGTAAAGTATATT+AGG - chr2_4:63599468-63599487 None:intergenic 10.0%
!!! AAAAAATAGATTTTTTTTAC+AGG - chr2_4:63599911-63599930 None:intergenic 10.0%
!! TTGTAAAATATAATTAATAC+AGG - chr2_4:63600132-63600151 None:intergenic 10.0%
!! AATTGAATTAATAATATGAA+TGG - chr2_4:63600922-63600941 None:intergenic 10.0%
!!! AAATTTAAATTTTAGAATGA+AGG + chr2_4:63600996-63601015 Msa0341730:intron 10.0%
!! TTGTTTATTTATAATAGCAA+AGG - chr2_4:63595357-63595376 None:intergenic 15.0%
!! ATTTAATTGAATTGAAGATT+AGG - chr2_4:63595510-63595529 None:intergenic 15.0%
!! TAATCTTCAATTCAATTAAA+TGG + chr2_4:63595509-63595528 Msa0341730:exon 15.0%
!!! TTTTAATTTGTAGTATAGTA+TGG - chr2_4:63596693-63596712 None:intergenic 15.0%
!!! TTGTTATTTTTTTTTTTGTC+CGG + chr2_4:63597307-63597326 Msa0341730:intron 15.0%
!! ACAAATTTCCTAAATATAAT+GGG - chr2_4:63598293-63598312 None:intergenic 15.0%
!! CTTTAATAATCTTAAAACTT+TGG + chr2_4:63598436-63598455 Msa0341730:intron 15.0%
!!! TTTTAATAAAAAAGTGATGT+GGG - chr2_4:63598679-63598698 None:intergenic 15.0%
!!! ATTTTAATAAAAAAGTGATG+TGG - chr2_4:63598680-63598699 None:intergenic 15.0%
!!! TTTTTTTTTATAATAGTGAC+CGG - chr2_4:63598945-63598964 None:intergenic 15.0%
!! AATTATTAAATTGTGTCTTA+AGG + chr2_4:63599026-63599045 Msa0341730:intron 15.0%
!!! TTAATCTCGTTTTTAATAAT+AGG + chr2_4:63599407-63599426 Msa0341730:intron 15.0%
!! GAAAAACAAACTATATAAAA+TGG + chr2_4:63599847-63599866 Msa0341730:intron 15.0%
!!! ATTTTCATGTAAAAGTTAAA+AGG - chr2_4:63601132-63601151 None:intergenic 15.0%
!!! ACATGAAAATACATAATTTT+TGG + chr2_4:63601142-63601161 Msa0341730:intron 15.0%
!!! CATGAAAATACATAATTTTT+GGG + chr2_4:63601143-63601162 Msa0341730:intron 15.0%
!! GGAAAAATTGATTAAATATA+AGG + chr2_4:63601232-63601251 Msa0341730:intron 15.0%
!! CAAATTAATGTTAATAATTG+AGG + chr2_4:63601384-63601403 Msa0341730:intron 15.0%
!!! ACTTATACATTTTTTTTTGA+AGG - chr2_4:63601654-63601673 None:intergenic 15.0%
!! CAAAATTCTGAATATTTATA+GGG - chr2_4:63601893-63601912 None:intergenic 15.0%
!! ACAAAATTCTGAATATTTAT+AGG - chr2_4:63601894-63601913 None:intergenic 15.0%
!! TTTATAATAGCAAAGGATTA+CGG - chr2_4:63595350-63595369 None:intergenic 20.0%
!!! AATCAAACTTGTTGAAATAT+TGG - chr2_4:63595448-63595467 None:intergenic 20.0%
!!! ATCATTGTTATTATCATCTA+TGG - chr2_4:63596027-63596046 None:intergenic 20.0%
!! AAGAAAGAAATGAATGAATT+AGG - chr2_4:63596582-63596601 None:intergenic 20.0%
!!! ATTTTAACATGAATGAAGAA+AGG - chr2_4:63596797-63596816 None:intergenic 20.0%
!! TATCACAGTGAATAATTTAA+AGG - chr2_4:63596829-63596848 None:intergenic 20.0%
!! TTCTTACATCAATATCATAT+AGG + chr2_4:63596925-63596944 Msa0341730:intron 20.0%
!! AGTTTCATATATTATTTCGT+TGG - chr2_4:63597131-63597150 None:intergenic 20.0%
!! AAATAATCATACAGAAATCT+AGG - chr2_4:63597180-63597199 None:intergenic 20.0%
!! GACAATACATAATATATACA+AGG - chr2_4:63597348-63597367 None:intergenic 20.0%
!! TTTCTTCTTATAAAAAGGAT+CGG - chr2_4:63597971-63597990 None:intergenic 20.0%
!!! TGGTTTTTCTTCTTATAAAA+AGG - chr2_4:63597976-63597995 None:intergenic 20.0%
!! ATAACAAATAATGATTGTCT+TGG - chr2_4:63598012-63598031 None:intergenic 20.0%
!!! TACTTCACAAATTTTTATGA+GGG - chr2_4:63598062-63598081 None:intergenic 20.0%
!!! ATACTTCACAAATTTTTATG+AGG - chr2_4:63598063-63598082 None:intergenic 20.0%
!! TTGGTACTATTTATAAGAAA+AGG - chr2_4:63598174-63598193 None:intergenic 20.0%
!!! AATTTTCTTATAAATAGGAC+TGG + chr2_4:63598207-63598226 Msa0341730:intron 20.0%
!! CACAAATTTCCTAAATATAA+TGG - chr2_4:63598294-63598313 None:intergenic 20.0%
!!! CTCATTTTTTGTTACTTAAA+TGG - chr2_4:63598400-63598419 None:intergenic 20.0%
!! CATTTAAGTAACAAAAAATG+AGG + chr2_4:63598398-63598417 Msa0341730:intron 20.0%
!! CCATTTATTATATTTAAACG+AGG - chr2_4:63599069-63599088 None:intergenic 20.0%
!! CCTCGTTTAAATATAATAAA+TGG + chr2_4:63599066-63599085 Msa0341730:intron 20.0%
!! TATAATAAATGGAACATTAC+AGG + chr2_4:63599077-63599096 Msa0341730:intron 20.0%
!! ATAATAAATGGAACATTACA+GGG + chr2_4:63599078-63599097 Msa0341730:intron 20.0%
!!! TCGTTTTTAATAATAGGAAA+AGG + chr2_4:63599413-63599432 Msa0341730:intron 20.0%
!!! CGTTTTTAATAATAGGAAAA+GGG + chr2_4:63599414-63599433 Msa0341730:intron 20.0%
!!! GTTTTTAATAATAGGAAAAG+GGG + chr2_4:63599415-63599434 Msa0341730:intron 20.0%
!! TTTGGATGAGATAATTTAAA+AGG - chr2_4:63599631-63599650 None:intergenic 20.0%
!! TTAAATTATCTCATCCAAAT+TGG + chr2_4:63599632-63599651 Msa0341730:intron 20.0%
!! GAGTAAAAATTGACTAAATT+AGG + chr2_4:63599768-63599787 Msa0341730:intron 20.0%
!!! ATAGTTTGTTTTTCTTCAAA+AGG - chr2_4:63599841-63599860 None:intergenic 20.0%
!! CTTAAAAAAGCTATAACAAA+CGG + chr2_4:63600062-63600081 Msa0341730:intron 20.0%
!! ATTAAATAATGAAATGATGC+AGG + chr2_4:63600650-63600669 Msa0341730:intron 20.0%
!! AAGGAATTAATCAAATACAA+AGG + chr2_4:63600788-63600807 Msa0341730:CDS 20.0%
!! TAACAAAACAAAAAGTTAGT+AGG + chr2_4:63601211-63601230 Msa0341730:intron 20.0%
!!! ATATGGGTTAATTAAGTAAA+TGG + chr2_4:63601866-63601885 Msa0341730:three_prime_UTR 20.0%
!!! TAAACTCTAAAGCAAAACAT+TGG + chr2_4:63595388-63595407 Msa0341730:five_prime_UTR 25.0%
! ATCATCTAAACAAGAAACAA+CGG + chr2_4:63595536-63595555 Msa0341730:CDS 25.0%
! TCAAAACAATAAGAATGAAG+AGG - chr2_4:63595612-63595631 None:intergenic 25.0%
! AATAAATATGAAACAGAGGA+AGG - chr2_4:63596271-63596290 None:intergenic 25.0%
! AGTGAATAAATATGAAACAG+AGG - chr2_4:63596275-63596294 None:intergenic 25.0%
!! AATGCATTTATGTCGAATTT+TGG - chr2_4:63596350-63596369 None:intergenic 25.0%
! TTGAATCTTGTTAACAAACA+TGG + chr2_4:63596371-63596390 Msa0341730:CDS 25.0%
! AGATCATACTTATTAAGATC+TGG - chr2_4:63596449-63596468 None:intergenic 25.0%
! TCAATTAGGATATTGAAATC+AGG + chr2_4:63596473-63596492 Msa0341730:CDS 25.0%
! AAATTTCCAAATGCAATTCT+TGG + chr2_4:63596539-63596558 Msa0341730:CDS 25.0%
! AAAGAAATGAATGAATTAGG+TGG - chr2_4:63596579-63596598 None:intergenic 25.0%
! ATCATGAAAATCTGATATCT+CGG - chr2_4:63596729-63596748 None:intergenic 25.0%
! CATAAAAAACAACAAACAAC+TGG - chr2_4:63596990-63597009 None:intergenic 25.0%
!!! CAGTTGTTTGTTGTTTTTTA+TGG + chr2_4:63596988-63597007 Msa0341730:intron 25.0%
! AGACACACACAATATAATTT+AGG - chr2_4:63597086-63597105 None:intergenic 25.0%
! ACATAATATATACAAGGTCT+GGG - chr2_4:63597342-63597361 None:intergenic 25.0%
! TACATAATATATACAAGGTC+TGG - chr2_4:63597343-63597362 None:intergenic 25.0%
! TTTCGTATAACACACATTAT+CGG - chr2_4:63597487-63597506 None:intergenic 25.0%
!! TTTTTAAATCAGAACCATAG+AGG - chr2_4:63597526-63597545 None:intergenic 25.0%
! AAATGCTAATGAATGTCTTT+AGG + chr2_4:63597812-63597831 Msa0341730:intron 25.0%
! AATGCTAATGAATGTCTTTA+GGG + chr2_4:63597813-63597832 Msa0341730:intron 25.0%
! TAAGTTAAGACTATCTTCAA+TGG + chr2_4:63597859-63597878 Msa0341730:intron 25.0%
! ATTAGATATCGGGTATTAAA+TGG - chr2_4:63597896-63597915 None:intergenic 25.0%
! TTTAATACCCGATATCTAAT+AGG + chr2_4:63597896-63597915 Msa0341730:intron 25.0%
!!! TTGGTCTTTTCAATATTAGT+GGG - chr2_4:63598094-63598113 None:intergenic 25.0%
! AAAAGACCAACATTAAATGA+GGG + chr2_4:63598104-63598123 Msa0341730:intron 25.0%
! ATTAAGACCTCATTCTTAAA+TGG + chr2_4:63598652-63598671 Msa0341730:intron 25.0%
! TTAAGACCTCATTCTTAAAT+GGG + chr2_4:63598653-63598672 Msa0341730:intron 25.0%
!!! TCATCTTTAAGGTCTTAAAT+GGG - chr2_4:63598861-63598880 None:intergenic 25.0%
! CATTTATTCAATACTTCATC+CGG + chr2_4:63598923-63598942 Msa0341730:intron 25.0%
! AATGTACTTTAAATCCACTT+GGG - chr2_4:63599717-63599736 None:intergenic 25.0%
! AAATGTACTTTAAATCCACT+TGG - chr2_4:63599718-63599737 None:intergenic 25.0%
!! TCAATTTTTACTCGTTCTAA+AGG - chr2_4:63599761-63599780 None:intergenic 25.0%
!!! TCAAAAGGTGTTTATAAAAG+AGG - chr2_4:63599826-63599845 None:intergenic 25.0%
!!! AAAGCCTTATTTATACCTTT+GGG - chr2_4:63600097-63600116 None:intergenic 25.0%
!! ATTATATTTTACAACTGCTC+TGG + chr2_4:63600138-63600157 Msa0341730:intron 25.0%
!!! CTTTGAAATATTGGAAACAA+AGG + chr2_4:63600216-63600235 Msa0341730:intron 25.0%
! TTAGCCAATTTGGATAAATT+AGG + chr2_4:63600267-63600286 Msa0341730:intron 25.0%
!!! ATGACACAAGAAGTATTTAA+GGG + chr2_4:63600382-63600401 Msa0341730:intron 25.0%
! GTTATTACATTACATGAAAG+TGG - chr2_4:63600530-63600549 None:intergenic 25.0%
!!! TGTGTCTACATACATTTTTT+TGG - chr2_4:63600552-63600571 None:intergenic 25.0%
!! ATTCATTGTTGATAGATTGA+AGG + chr2_4:63600769-63600788 Msa0341730:CDS 25.0%
! ATAAGAAAAGACTAGACTTA+CGG - chr2_4:63600887-63600906 None:intergenic 25.0%
!!! GAAAATACATAATTTTTGGG+AGG + chr2_4:63601146-63601165 Msa0341730:intron 25.0%
!! GAGAAGTACATACATAAATT+AGG - chr2_4:63601313-63601332 None:intergenic 25.0%
!! ATGTTAATAATTGAGGTGTT+TGG + chr2_4:63601391-63601410 Msa0341730:intron 25.0%
!! TGTTAATAATTGAGGTGTTT+GGG + chr2_4:63601392-63601411 Msa0341730:intron 25.0%
! CTTGTAACTTATACATGATA+TGG - chr2_4:63601629-63601648 None:intergenic 25.0%
! TACCAATAACATTATGTGTT+GGG - chr2_4:63601781-63601800 None:intergenic 25.0%
! TTACCAATAACATTATGTGT+TGG - chr2_4:63601782-63601801 None:intergenic 25.0%
AATAAGAATGAAGAGGTTGA+TGG - chr2_4:63595605-63595624 None:intergenic 30.0%
TTTGAAAATCTCTCCGAATT+TGG + chr2_4:63595627-63595646 Msa0341730:CDS 30.0%
GAACAACAATGATCATCATA+AGG + chr2_4:63595959-63595978 Msa0341730:CDS 30.0%
TCACTGCTGTAATATAGATT+TGG - chr2_4:63596230-63596249 None:intergenic 30.0%
!! TTTGCTATTGCCAATACAAT+CGG - chr2_4:63596422-63596441 None:intergenic 30.0%
AGTATGATCTGTCTTCAATT+AGG + chr2_4:63596459-63596478 Msa0341730:CDS 30.0%
ATTAGGATATTGAAATCAGG+TGG + chr2_4:63596476-63596495 Msa0341730:CDS 30.0%
AAGAACTTGAAGAAACTGTT+AGG + chr2_4:63596513-63596532 Msa0341730:CDS 30.0%
GGAAAAAGAATTAAAATGCG+TGG - chr2_4:63596635-63596654 None:intergenic 30.0%
TGAAACATAAAGATGTAACC+AGG - chr2_4:63597033-63597052 None:intergenic 30.0%
! TTAGGTAGACATGATTTTTG+AGG - chr2_4:63597068-63597087 None:intergenic 30.0%
CATAATATATACAAGGTCTG+GGG - chr2_4:63597341-63597360 None:intergenic 30.0%
!! CTTGTTATTTGTTATGACGT+AGG + chr2_4:63597403-63597422 Msa0341730:intron 30.0%
!! CTTGTTATTTGTTATGACGT+AGG + chr2_4:63597403-63597422 Msa0341730:intron 30.0%
GTGTTATACGAAAACTTCTA+TGG + chr2_4:63597494-63597513 Msa0341730:intron 30.0%
TATCGGGTATTAAATGGTTA+AGG - chr2_4:63597890-63597909 None:intergenic 30.0%
TTCTTATAAAAAGGATCGGA+GGG - chr2_4:63597967-63597986 None:intergenic 30.0%
!!! GTCTTGGTTTTGATGATTTT+TGG - chr2_4:63597996-63598015 None:intergenic 30.0%
!!! GTTGGTCTTTTCAATATTAG+TGG - chr2_4:63598095-63598114 None:intergenic 30.0%
GAAAAGACCAACATTAAATG+AGG + chr2_4:63598103-63598122 Msa0341730:intron 30.0%
! AGAAAAGGTCACAACTTTTA+AGG - chr2_4:63598159-63598178 None:intergenic 30.0%
TTTCTTATAAATAGGACTGG+AGG + chr2_4:63598210-63598229 Msa0341730:intron 30.0%
TTCTTATAAATAGGACTGGA+GGG + chr2_4:63598211-63598230 Msa0341730:intron 30.0%
!! ATTTGTGTGAGATGTTGTTT+TGG + chr2_4:63598307-63598326 Msa0341730:intron 30.0%
! GATTATTAAAGCATCCACAA+TGG - chr2_4:63598427-63598446 None:intergenic 30.0%
!!! TCACTTTTTTTTCCCACAAT+GGG - chr2_4:63598607-63598626 None:intergenic 30.0%
CTCTAACAAAAGGTCTAATT+GGG - chr2_4:63598760-63598779 None:intergenic 30.0%
!! CTCATCTTTAAGGTCTTAAA+TGG - chr2_4:63598862-63598881 None:intergenic 30.0%
ATACATCACCTTTCATGATT+TGG - chr2_4:63599287-63599306 None:intergenic 30.0%
ATGTGCATAATGTTTGACAA+CGG + chr2_4:63599577-63599596 Msa0341730:intron 30.0%
GTTTATAAAAGAGGCGAAAT+GGG - chr2_4:63599817-63599836 None:intergenic 30.0%
TGTTTATAAAAGAGGCGAAA+TGG - chr2_4:63599818-63599837 None:intergenic 30.0%
! AAGTCCCAAAGGTATAAATA+AGG + chr2_4:63600090-63600109 Msa0341730:intron 30.0%
!! GAAAGCCTTATTTATACCTT+TGG - chr2_4:63600098-63600117 None:intergenic 30.0%
! AATATTTCAAAGTGCTAGCT+TGG - chr2_4:63600208-63600227 None:intergenic 30.0%
!! AAGCTAGCACTTTGAAATAT+TGG + chr2_4:63600207-63600226 Msa0341730:intron 30.0%
! GAAACAAAGGTTCTTTTTAG+AGG + chr2_4:63600229-63600248 Msa0341730:intron 30.0%
TGTGCCTAATTTATCCAAAT+TGG - chr2_4:63600274-63600293 None:intergenic 30.0%
!! CATGACACAAGAAGTATTTA+AGG + chr2_4:63600381-63600400 Msa0341730:intron 30.0%
AACTACACGCTTTCAATATT+CGG - chr2_4:63600411-63600430 None:intergenic 30.0%
CATGAAATGATTGATTGCAA+AGG + chr2_4:63600445-63600464 Msa0341730:intron 30.0%
AAATGATTGATTGCAAAGGT+AGG + chr2_4:63600449-63600468 Msa0341730:intron 30.0%
TAAGAAAAGACTAGACTTAC+GGG - chr2_4:63600886-63600905 None:intergenic 30.0%
!!! TTTTAGAATGAAGGATGAAG+CGG + chr2_4:63601005-63601024 Msa0341730:intron 30.0%
!! TACATAATTTTTGGGAGGTA+AGG + chr2_4:63601151-63601170 Msa0341730:intron 30.0%
ACATAAATTAGGTGACAAGT+AGG - chr2_4:63601302-63601321 None:intergenic 30.0%
!!! ATTTTACACGTTTGTTGTGT+AGG - chr2_4:63601558-63601577 None:intergenic 30.0%
TACACAACAAACGTGTAAAA+TGG + chr2_4:63601557-63601576 Msa0341730:three_prime_UTR 30.0%
ACACAACAAACGTGTAAAAT+GGG + chr2_4:63601558-63601577 Msa0341730:three_prime_UTR 30.0%
TCATATTATACGTCCATAAG+CGG + chr2_4:63601731-63601750 Msa0341730:three_prime_UTR 30.0%
AATAACATTATGTGTTGGGA+CGG - chr2_4:63601777-63601796 None:intergenic 30.0%
AGATTAGGAGATGAAGAAGA+AGG - chr2_4:63595495-63595514 None:intergenic 35.0%
AAGACAAATTCAGGGGAATT+GGG - chr2_4:63595789-63595808 None:intergenic 35.0%
AAAGGAGAAGACAAATTCAG+GGG - chr2_4:63595796-63595815 None:intergenic 35.0%
GAAAGGAGAAGACAAATTCA+GGG - chr2_4:63595797-63595816 None:intergenic 35.0%
AGAAAGGAGAAGACAAATTC+AGG - chr2_4:63595798-63595817 None:intergenic 35.0%
GAATTTGTCTTCTCCTTTCT+TGG + chr2_4:63595798-63595817 Msa0341730:CDS 35.0%
!! TGTTATGATCAACTTGCTGT+TGG - chr2_4:63595904-63595923 None:intergenic 35.0%
CAACAATGATCATCATAAGG+TGG + chr2_4:63595962-63595981 Msa0341730:CDS 35.0%
GATGTTAACACACAAAGGTT+TGG + chr2_4:63596169-63596188 Msa0341730:CDS 35.0%
!! GAATTTTGGCATCAAGAGAA+TGG - chr2_4:63596336-63596355 None:intergenic 35.0%
! TCTTCAAGTTCTTTACCAAG+TGG - chr2_4:63596506-63596525 None:intergenic 35.0%
! TTTTCCTGCACTTATACGTT+AGG + chr2_4:63596649-63596668 Msa0341730:intron 35.0%
TTTCCTGCACTTATACGTTA+GGG + chr2_4:63596650-63596669 Msa0341730:intron 35.0%
GAATGAAGAAAGGCAATCTA+TGG - chr2_4:63596787-63596806 None:intergenic 35.0%
! TGAGTTTAGCTTAGTTGGTA+AGG - chr2_4:63597370-63597389 None:intergenic 35.0%
TACCAACTAAGCTAAACTCA+CGG + chr2_4:63597370-63597389 Msa0341730:intron 35.0%
!! GTCTTTAGGGCATTCTTTAA+AGG + chr2_4:63597826-63597845 Msa0341730:intron 35.0%
TAAGACTATCTTCAATGGTG+AGG + chr2_4:63597864-63597883 Msa0341730:intron 35.0%
CTTCTTATAAAAAGGATCGG+AGG - chr2_4:63597968-63597987 None:intergenic 35.0%
TTCTAGCCCTCATTTAATGT+TGG - chr2_4:63598113-63598132 None:intergenic 35.0%
TTGTGCGTCCCATTATATTT+AGG + chr2_4:63598282-63598301 Msa0341730:intron 35.0%
AAAAAATGAGGTCTCCATTG+TGG + chr2_4:63598410-63598429 Msa0341730:intron 35.0%
ATTAGGTACCAGGTCTTAAA+TGG - chr2_4:63598577-63598596 None:intergenic 35.0%
! TTTAAGACCTGGTACCTAAT+AGG + chr2_4:63598577-63598596 Msa0341730:intron 35.0%
!!! ACTTTTTTTTCCCACAATGG+GGG - chr2_4:63598605-63598624 None:intergenic 35.0%
!!! CACTTTTTTTTCCCACAATG+GGG - chr2_4:63598606-63598625 None:intergenic 35.0%
!!! CTCACTTTTTTTTCCCACAA+TGG - chr2_4:63598608-63598627 None:intergenic 35.0%
TGAGTGTCTTAAAAGATGCA+AGG + chr2_4:63598624-63598643 Msa0341730:intron 35.0%
CCTCTAACAAAAGGTCTAAT+TGG - chr2_4:63598761-63598780 None:intergenic 35.0%
! CCAATTAGACCTTTTGTTAG+AGG + chr2_4:63598758-63598777 Msa0341730:intron 35.0%
AATGGAGATCCTCTAACAAA+AGG - chr2_4:63598770-63598789 None:intergenic 35.0%
! TTTTGTTAGAGGATCTCCAT+TGG + chr2_4:63598769-63598788 Msa0341730:intron 35.0%
TAAAGAGTGATGTGTCAATG+TGG + chr2_4:63598833-63598852 Msa0341730:intron 35.0%
AAAGAGTGATGTGTCAATGT+GGG + chr2_4:63598834-63598853 Msa0341730:intron 35.0%
AATGGAGACTCTCATCTTTA+AGG - chr2_4:63598872-63598891 None:intergenic 35.0%
AATGGAACATTACAGGGATA+CGG + chr2_4:63599084-63599103 Msa0341730:intron 35.0%
AAATGCAGAGATGAAGATTG+TGG + chr2_4:63599200-63599219 Msa0341730:CDS 35.0%
TTATGCAGATTTCACCAGAT+TGG - chr2_4:63599257-63599276 None:intergenic 35.0%
CAACGGTATATATGAGAATG+AGG + chr2_4:63599594-63599613 Msa0341730:intron 35.0%
ATAAATAAGGCTTTCGCTGA+CGG + chr2_4:63600103-63600122 Msa0341730:intron 35.0%
! GAAATCAAGGTTAGCCAATT+TGG + chr2_4:63600257-63600276 Msa0341730:intron 35.0%
AGGTTATCTAAATGATCGAG+AGG + chr2_4:63600670-63600689 Msa0341730:intron 35.0%
! AAAGAAGGTTGGTTGTATAC+AGG + chr2_4:63600713-63600732 Msa0341730:CDS 35.0%
TGGTTGTATACAGGTGATAT+TGG + chr2_4:63600722-63600741 Msa0341730:CDS 35.0%
GGTTGTATACAGGTGATATT+GGG + chr2_4:63600723-63600742 Msa0341730:CDS 35.0%
! ACAGCAGCATCAGAAATTTT+GGG - chr2_4:63600860-63600879 None:intergenic 35.0%
! AACAGCAGCATCAGAAATTT+TGG - chr2_4:63600861-63600880 None:intergenic 35.0%
TATGCATATGCATGCATGAA+TGG - chr2_4:63600977-63600996 None:intergenic 35.0%
TAAGCACTTTATCTCCAAAC+AGG + chr2_4:63601095-63601114 Msa0341730:CDS 35.0%
AGGAAGAAAAAGAACCTGTT+TGG - chr2_4:63601112-63601131 None:intergenic 35.0%
TGTGAGTTAAGATCTTAGAG+CGG + chr2_4:63601264-63601283 Msa0341730:intron 35.0%
ATACCTCACACACAACATTT+AGG - chr2_4:63601337-63601356 None:intergenic 35.0%
! GTGTTTGGGTTTGATATTAC+AGG + chr2_4:63601406-63601425 Msa0341730:intron 35.0%
! TTTGGGTTTGATATTACAGG+TGG + chr2_4:63601409-63601428 Msa0341730:intron 35.0%
! GTGTAGGAACATTTTCAATG+TGG - chr2_4:63601542-63601561 None:intergenic 35.0%
TGTAAAATGGGAGATTCATG+TGG + chr2_4:63601570-63601589 Msa0341730:three_prime_UTR 35.0%
GTCCCAACACATAATGTTAT+TGG + chr2_4:63601776-63601795 Msa0341730:three_prime_UTR 35.0%
!! CTAGTTCTGTTCTGTTGTGT+CGG + chr2_4:63595418-63595437 Msa0341730:five_prime_UTR 40.0%
! TAGTTCTGTTCTGTTGTGTC+GGG + chr2_4:63595419-63595438 Msa0341730:five_prime_UTR 40.0%
TTAGGAGATGAAGAAGAAGG+AGG - chr2_4:63595492-63595511 None:intergenic 40.0%
!! AATGAAGAGGTTGATGGTTG+GGG - chr2_4:63595599-63595618 None:intergenic 40.0%
!! GAATGAAGAGGTTGATGGTT+GGG - chr2_4:63595600-63595619 None:intergenic 40.0%
!! AGAATGAAGAGGTTGATGGT+TGG - chr2_4:63595601-63595620 None:intergenic 40.0%
ACATGGACGTGAACCAAATT+CGG - chr2_4:63595643-63595662 None:intergenic 40.0%
AACAAATTGGGACTCCAACA+AGG + chr2_4:63595741-63595760 Msa0341730:CDS 40.0%
TCATGATGACTTCACCTTGT+TGG - chr2_4:63595758-63595777 None:intergenic 40.0%
AGACAAATTCAGGGGAATTG+GGG - chr2_4:63595788-63595807 None:intergenic 40.0%
GAAGACAAATTCAGGGGAAT+TGG - chr2_4:63595790-63595809 None:intergenic 40.0%
TTTCTTGGCGCTTCTTATCT+CGG + chr2_4:63595813-63595832 Msa0341730:CDS 40.0%
!! TATGATCAACTTGCTGTTGG+AGG - chr2_4:63595901-63595920 None:intergenic 40.0%
CAATGATCATCATAAGGTGG+TGG + chr2_4:63595965-63595984 Msa0341730:CDS 40.0%
CCTGTTGTTCCTGATGAATA+TGG - chr2_4:63596134-63596153 None:intergenic 40.0%
CCATATTCATCAGGAACAAC+AGG + chr2_4:63596131-63596150 Msa0341730:CDS 40.0%
GAACAACAGGTCTACCAAAA+GGG + chr2_4:63596144-63596163 Msa0341730:CDS 40.0%
AACAACAGGTCTACCAAAAG+GGG + chr2_4:63596145-63596164 Msa0341730:CDS 40.0%
! TGTGTTAACATCACCCCTTT+TGG - chr2_4:63596161-63596180 None:intergenic 40.0%
AGCATAGCACAACAAGTAGA+TGG + chr2_4:63596197-63596216 Msa0341730:CDS 40.0%
! CTAAACTCTGTTTTGCTCTG+CGG + chr2_4:63596293-63596312 Msa0341730:CDS 40.0%
AATACAATCGGAGGAACAAC+CGG - chr2_4:63596410-63596429 None:intergenic 40.0%
TCCAAATGCAATTCTTGGAC+AGG + chr2_4:63596544-63596563 Msa0341730:CDS 40.0%
ACCTGTCCAAGAATTGCATT+TGG - chr2_4:63596548-63596567 None:intergenic 40.0%
AATTAAAATGCGTGGCGTGA+GGG - chr2_4:63596627-63596646 None:intergenic 40.0%
TTCCTGCACTTATACGTTAG+GGG + chr2_4:63596651-63596670 Msa0341730:intron 40.0%
ATAAAGATGTAACCAGGCGT+TGG - chr2_4:63597027-63597046 None:intergenic 40.0%
ACCAACTAAGCTAAACTCAC+GGG + chr2_4:63597371-63597390 Msa0341730:intron 40.0%
AAATCAGAACCATAGAGGTC+AGG - chr2_4:63597521-63597540 None:intergenic 40.0%
GTAGGCACCTATTAGATATC+GGG - chr2_4:63597906-63597925 None:intergenic 40.0%
GGTAGGCACCTATTAGATAT+CGG - chr2_4:63597907-63597926 None:intergenic 40.0%
CCTACCCAACAATCTTAAGT+GGG + chr2_4:63597921-63597940 Msa0341730:intron 40.0%
GAGTCCCACTTAAGATTGTT+GGG - chr2_4:63597928-63597947 None:intergenic 40.0%
TGAGTCCCACTTAAGATTGT+TGG - chr2_4:63597929-63597948 None:intergenic 40.0%
!! GATCGGAGGGAGTATTAAAA+TGG - chr2_4:63597954-63597973 None:intergenic 40.0%
!!! GTGTGAGATGTTGTTTTGGA+CGG + chr2_4:63598311-63598330 Msa0341730:intron 40.0%
!!! TGTGAGATGTTGTTTTGGAC+GGG + chr2_4:63598312-63598331 Msa0341730:intron 40.0%
!! ATGCTCTAAAGGCACTATTC+AGG - chr2_4:63598534-63598553 None:intergenic 40.0%
!! TGCCTTTAGAGCATCTACAA+TGG + chr2_4:63598540-63598559 Msa0341730:intron 40.0%
CACCATTGTAGATGCTCTAA+AGG - chr2_4:63598545-63598564 None:intergenic 40.0%
! TTAGAGCATCTACAATGGTG+AGG + chr2_4:63598545-63598564 Msa0341730:intron 40.0%
AAAGATGAGAGTCTCCATTG+TGG + chr2_4:63598873-63598892 Msa0341730:intron 40.0%
GCTAAACTCATCGTTAACAC+TGG - chr2_4:63599126-63599145 None:intergenic 40.0%
GAACCAGTGAATGTAAAAGC+AGG + chr2_4:63599156-63599175 Msa0341730:CDS 40.0%
AATGTAAAAGCAGGTGCATG+TGG + chr2_4:63599165-63599184 Msa0341730:CDS 40.0%
GGTAAAGATTTACCAGTGTC+AGG - chr2_4:63599228-63599247 None:intergenic 40.0%
TCTTTACCTCGAAACCAATC+TGG + chr2_4:63599240-63599259 Msa0341730:CDS 40.0%
!! ATTTCACCAGATTGGTTTCG+AGG - chr2_4:63599249-63599268 None:intergenic 40.0%
TCTGGTGAAATCTGCATAAG+AGG + chr2_4:63599258-63599277 Msa0341730:CDS 40.0%
! GATTTCTTGTGGTGCCAATT+TGG - chr2_4:63599649-63599668 None:intergenic 40.0%
GGTCTCAAACCAATATCATC+AGG + chr2_4:63599687-63599706 Msa0341730:intron 40.0%
!! TTGGGTTGACCTGATGATAT+TGG - chr2_4:63599699-63599718 None:intergenic 40.0%
! TTTAGAGGCGTGAGAAATCA+AGG + chr2_4:63600244-63600263 Msa0341730:intron 40.0%
! TTGAAGTGTCCTCTCTTCAT+GGG + chr2_4:63600472-63600491 Msa0341730:intron 40.0%
!! TGGAGCTGGATTGTTTTGTT+TGG - chr2_4:63600510-63600529 None:intergenic 40.0%
ACATTACATGAAAGTGGAGC+TGG - chr2_4:63600524-63600543 None:intergenic 40.0%
GAGAGAACCATAGACAAAGA+AGG + chr2_4:63600698-63600717 Msa0341730:CDS 40.0%
GAACCATAGACAAAGAAGGT+TGG + chr2_4:63600702-63600721 Msa0341730:CDS 40.0%
CAACCAACCTTCTTTGTCTA+TGG - chr2_4:63600708-63600727 None:intergenic 40.0%
GCATTTGTGGTGAGATCAAA+TGG + chr2_4:63601045-63601064 Msa0341730:CDS 40.0%
GTGAGTTAAGATCTTAGAGC+GGG + chr2_4:63601265-63601284 Msa0341730:intron 40.0%
TCACCTAAATGTTGTGTGTG+AGG + chr2_4:63601331-63601350 Msa0341730:intron 40.0%
!! ATTTTGCCTGATGGTGACTT+GGG - chr2_4:63601479-63601498 None:intergenic 40.0%
ACGTCCATAAGCGGAAAATT+TGG + chr2_4:63601740-63601759 Msa0341730:three_prime_UTR 40.0%
CGTCCATAAGCGGAAAATTT+GGG + chr2_4:63601741-63601760 Msa0341730:three_prime_UTR 40.0%
GTCCATAAGCGGAAAATTTG+GGG + chr2_4:63601742-63601761 Msa0341730:three_prime_UTR 40.0%
! AACCCCAAATTTTCCGCTTA+TGG - chr2_4:63601747-63601766 None:intergenic 40.0%
TGGTTGGGGATGTATATGTC+TGG - chr2_4:63595585-63595604 None:intergenic 45.0%
TGAGACCAGAGGCAACTTTA+CGG - chr2_4:63595722-63595741 None:intergenic 45.0%
TGCCTCTGGTCTCAACAAAT+TGG + chr2_4:63595728-63595747 Msa0341730:CDS 45.0%
GCCTCTGGTCTCAACAAATT+GGG + chr2_4:63595729-63595748 Msa0341730:CDS 45.0%
!! TCCCAATTTGTTGAGACCAG+AGG - chr2_4:63595733-63595752 None:intergenic 45.0%
!! GAGATAAGAAGCGCCAAGAA+AGG - chr2_4:63595814-63595833 None:intergenic 45.0%
GGAACAACAGGTCTACCAAA+AGG + chr2_4:63596143-63596162 Msa0341730:CDS 45.0%
GGGGTGATGTTAACACACAA+AGG + chr2_4:63596164-63596183 Msa0341730:CDS 45.0%
ACATGGAGTAACAGTTGCAC+CGG + chr2_4:63596388-63596407 Msa0341730:CDS 45.0%
GGTTGTTCCTCCGATTGTAT+TGG + chr2_4:63596409-63596428 Msa0341730:CDS 45.0%
GCTATTGCCAATACAATCGG+AGG - chr2_4:63596419-63596438 None:intergenic 45.0%
GAATTAAAATGCGTGGCGTG+AGG - chr2_4:63596628-63596647 None:intergenic 45.0%
ATCCCCTAACGTATAAGTGC+AGG - chr2_4:63596656-63596675 None:intergenic 45.0%
CCAACTAAGCTAAACTCACG+GGG + chr2_4:63597372-63597391 Msa0341730:intron 45.0%
TTCTATGGTCCTGACCTCTA+TGG + chr2_4:63597509-63597528 Msa0341730:intron 45.0%
GCCTACCCAACAATCTTAAG+TGG + chr2_4:63597920-63597939 Msa0341730:intron 45.0%
CCCACTTAAGATTGTTGGGT+AGG - chr2_4:63597924-63597943 None:intergenic 45.0%
! GGTCTTCACCATTTAAGACC+TGG + chr2_4:63598566-63598585 Msa0341730:intron 45.0%
CTAATAGGTACCCCCATTGT+GGG + chr2_4:63598592-63598611 Msa0341730:intron 45.0%
TGTGGGCCCATTTAAGAATG+AGG - chr2_4:63598662-63598681 None:intergenic 45.0%
TTAGAGGATCTCCATTGGAG+TGG + chr2_4:63598774-63598793 Msa0341730:intron 45.0%
TAGGTACTCAACCACTCCAA+TGG - chr2_4:63598788-63598807 None:intergenic 45.0%
GGAGTGGTTGAGTACCTATT+AGG + chr2_4:63598790-63598809 Msa0341730:intron 45.0%
TCTCCATTGTGGATGCTCTT+AGG + chr2_4:63598884-63598903 Msa0341730:intron 45.0%
CTCCATTGTGGATGCTCTTA+GGG + chr2_4:63598885-63598904 Msa0341730:intron 45.0%
!! GCACCTGCTTTTACATTCAC+TGG - chr2_4:63599162-63599181 None:intergenic 45.0%
AAGATTGTGGATCCTGACAC+TGG + chr2_4:63599213-63599232 Msa0341730:CDS 45.0%
AGAGGCGACCAAATCATGAA+AGG + chr2_4:63599276-63599295 Msa0341730:CDS 45.0%
ATCGCAGGTTCGATTTCTTG+TGG - chr2_4:63599660-63599679 None:intergenic 45.0%
TATCATCAGGTCAACCCAAG+TGG + chr2_4:63599700-63599719 Msa0341730:intron 45.0%
! AAACGGACTCTAAGTCCCAA+AGG + chr2_4:63600079-63600098 Msa0341730:intron 45.0%
! GTTGAAGTGTCCTCTCTTCA+TGG + chr2_4:63600471-63600490 Msa0341730:intron 45.0%
CAACAACATCCCATGAAGAG+AGG - chr2_4:63600484-63600503 None:intergenic 45.0%
! AGAAGAGCTTCAAGTTCAGC+TGG - chr2_4:63600827-63600846 None:intergenic 45.0%
!! AGAGGTACCTGTTGCATTTG+TGG + chr2_4:63601032-63601051 Msa0341730:CDS 45.0%
GATCTCACCACAAATGCAAC+AGG - chr2_4:63601042-63601061 None:intergenic 45.0%
!! GATTTTGCCTGATGGTGACT+TGG - chr2_4:63601480-63601499 None:intergenic 45.0%
! TTGCGCAAGATTTTGCCTGA+TGG - chr2_4:63601488-63601507 None:intergenic 45.0%
ATCAGGCAAAATCTTGCGCA+AGG + chr2_4:63601487-63601506 Msa0341730:CDS 45.0%
AACATTATGTGTTGGGACGG+AGG - chr2_4:63601774-63601793 None:intergenic 45.0%
!!! TTATTTTTTTCATTTTTTAT+CGG + chr2_4:63597589-63597608 Msa0341730:intron 5.0%
!! TATTAAATTAATTTAAAAGA+AGG - chr2_4:63599360-63599379 None:intergenic 5.0%
!! TAAATTAATTTAATATACTT+TGG + chr2_4:63599365-63599384 Msa0341730:intron 5.0%
!! AAATTAATTTAATATACTTT+GGG + chr2_4:63599366-63599385 Msa0341730:intron 5.0%
!! ATTTATAATAACAATTTAAT+TGG - chr2_4:63600346-63600365 None:intergenic 5.0%
!! TAATTTATTAAAAAAAAGAT+TGG - chr2_4:63600581-63600600 None:intergenic 5.0%
GGAGATGAAGAAGAAGGAGG+AGG - chr2_4:63595489-63595508 None:intergenic 50.0%
TAGGTGTAGACCTTTCCGGT+GGG - chr2_4:63595678-63595697 None:intergenic 50.0%
GTGGTAGGTGTAGACCTTTC+CGG - chr2_4:63595682-63595701 None:intergenic 50.0%
CAACTTTACGGGAGGTGAGT+TGG - chr2_4:63595710-63595729 None:intergenic 50.0%
GAGACCAGAGGCAACTTTAC+GGG - chr2_4:63595721-63595740 None:intergenic 50.0%
CAAATTCAGGGGAATTGGGG+AGG - chr2_4:63595785-63595804 None:intergenic 50.0%
!! CGTGAAGAAAGGATTGGCTG+CGG - chr2_4:63595850-63595869 None:intergenic 50.0%
CGCAGCCAATCCTTTCTTCA+CGG + chr2_4:63595848-63595867 Msa0341730:CDS 50.0%
AGCAGCCGTGAAGAAAGGAT+TGG - chr2_4:63595856-63595875 None:intergenic 50.0%
ATCTCAGCAGCCGTGAAGAA+AGG - chr2_4:63595861-63595880 None:intergenic 50.0%
TTCTTCACGGCTGCTGAGAT+TGG + chr2_4:63595861-63595880 Msa0341730:CDS 50.0%
!! TCATCATAAGGTGGTGGACG+TGG + chr2_4:63595971-63595990 Msa0341730:CDS 50.0%
TCTGGCTGGATCTTTGCATC+AGG - chr2_4:63596095-63596114 None:intergenic 50.0%
AAAGATCCAGCCAGACGATG+TGG + chr2_4:63596100-63596119 Msa0341730:CDS 50.0%
GTTGCGCTGCCATATTCATC+AGG + chr2_4:63596122-63596141 Msa0341730:CDS 50.0%
AAATCAGGTGGTGCTCCACT+TGG + chr2_4:63596488-63596507 Msa0341730:CDS 50.0%
TACATGTCAATGCCAACGCC+TGG + chr2_4:63597012-63597031 Msa0341730:intron 50.0%
! AAGGTCTGGGGTTCGAATTC+CGG - chr2_4:63597329-63597348 None:intergenic 50.0%
! CCCCGTGAGTTTAGCTTAGT+TGG - chr2_4:63597375-63597394 None:intergenic 50.0%
!! CCACAATGGGGGTACCTATT+AGG - chr2_4:63598594-63598613 None:intergenic 50.0%
CCTAATAGGTACCCCCATTG+TGG + chr2_4:63598591-63598610 Msa0341730:intron 50.0%
!! TGCCCTAAGAGCATCCACAA+TGG - chr2_4:63598890-63598909 None:intergenic 50.0%
ACAGGGATACGGAATGACTG+AGG + chr2_4:63599095-63599114 Msa0341730:intron 50.0%
ATCGAACCTGCGATTTCGAG+AGG + chr2_4:63599666-63599685 Msa0341730:intron 50.0%
TTGAGACCTCTCGAAATCGC+AGG - chr2_4:63599675-63599694 None:intergenic 50.0%
AGAATGAAGGATGAAGCGGC+TGG + chr2_4:63601009-63601028 Msa0341730:intron 50.0%
GCAATTCCCAAGTCACCATC+AGG + chr2_4:63601470-63601489 Msa0341730:CDS 50.0%
TTGAGAGCAAAGCTAGCAGC+AGG + chr2_4:63601512-63601531 Msa0341730:CDS 50.0%
!! GTGGGGGCATTGATGAGACA+TGG - chr2_4:63595660-63595679 None:intergenic 55.0%
TGTCTCATCAATGCCCCCAC+CGG + chr2_4:63595660-63595679 Msa0341730:CDS 55.0%
AGGTGTAGACCTTTCCGGTG+GGG - chr2_4:63595677-63595696 None:intergenic 55.0%
GTAGGTGTAGACCTTTCCGG+TGG - chr2_4:63595679-63595698 None:intergenic 55.0%
ACCTCCCGTAAAGTTGCCTC+TGG + chr2_4:63595714-63595733 Msa0341730:CDS 55.0%
ACCAGAGGCAACTTTACGGG+AGG - chr2_4:63595718-63595737 None:intergenic 55.0%
!! GAAGAAAGGATTGGCTGCGG+TGG - chr2_4:63595847-63595866 None:intergenic 55.0%
!! TAAGGTGGTGGACGTGGTGT+TGG + chr2_4:63595977-63595996 Msa0341730:CDS 55.0%
!! GGGGGTACCTATTAGGTACC+AGG - chr2_4:63598587-63598606 None:intergenic 55.0%
GGGATACGGAATGACTGAGG+CGG + chr2_4:63599098-63599117 Msa0341730:intron 55.0%
GGATACGGAATGACTGAGGC+GGG + chr2_4:63599099-63599118 Msa0341730:CDS 55.0%
GATACGGAATGACTGAGGCG+GGG + chr2_4:63599100-63599119 Msa0341730:CDS 55.0%
CATCAATGCCCCCACCGGAA+AGG + chr2_4:63595665-63595684 Msa0341730:CDS 60.0%
GGTGTAGACCTTTCCGGTGG+GGG - chr2_4:63595676-63595695 None:intergenic 60.0%
! GGTGAGTTGGACGTCGTGGT+AGG - chr2_4:63595697-63595716 None:intergenic 60.0%
!! AGGATTGGCTGCGGTGGCTA+TGG - chr2_4:63595841-63595860 None:intergenic 60.0%
GAAGGATGAAGCGGCTGGAG+AGG + chr2_4:63601014-63601033 Msa0341730:CDS 60.0%
! GGGAGGTGAGTTGGACGTCG+TGG - chr2_4:63595701-63595720 None:intergenic 65.0%
GCGCAACCACATCGTCTGGC+TGG - chr2_4:63596109-63596128 None:intergenic 65.0%
GGCAGCGCAACCACATCGTC+TGG - chr2_4:63596113-63596132 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 63595342 63601939 63595342 ID=Msa0341730;Name=Msa0341730
chr2_4 mRNA 63595342 63601939 63595342 ID=Msa0341730-mRNA-1;Parent=Msa0341730;Name=Msa0341730-mRNA-1;_AED=0.11;_eAED=0.11;_QI=186|1|1|1|1|1|5|392|558
chr2_4 exon 63595342 63596565 63595342 ID=Msa0341730-mRNA-1:exon:20314;Parent=Msa0341730-mRNA-1
chr2_4 exon 63599099 63599297 63599099 ID=Msa0341730-mRNA-1:exon:20315;Parent=Msa0341730-mRNA-1
chr2_4 exon 63600672 63600885 63600672 ID=Msa0341730-mRNA-1:exon:20316;Parent=Msa0341730-mRNA-1
chr2_4 exon 63601011 63601116 63601011 ID=Msa0341730-mRNA-1:exon:20317;Parent=Msa0341730-mRNA-1
chr2_4 exon 63601428 63601939 63601428 ID=Msa0341730-mRNA-1:exon:20318;Parent=Msa0341730-mRNA-1
chr2_4 five_prime_UTR 63595342 63595527 63595342 ID=Msa0341730-mRNA-1:five_prime_utr;Parent=Msa0341730-mRNA-1
chr2_4 CDS 63595528 63596565 63595528 ID=Msa0341730-mRNA-1:cds;Parent=Msa0341730-mRNA-1
chr2_4 CDS 63599099 63599297 63599099 ID=Msa0341730-mRNA-1:cds;Parent=Msa0341730-mRNA-1
chr2_4 CDS 63600672 63600885 63600672 ID=Msa0341730-mRNA-1:cds;Parent=Msa0341730-mRNA-1
chr2_4 CDS 63601011 63601116 63601011 ID=Msa0341730-mRNA-1:cds;Parent=Msa0341730-mRNA-1
chr2_4 CDS 63601428 63601547 63601428 ID=Msa0341730-mRNA-1:cds;Parent=Msa0341730-mRNA-1
chr2_4 three_prime_UTR 63601548 63601939 63601548 ID=Msa0341730-mRNA-1:three_prime_utr;Parent=Msa0341730-mRNA-1
Gene Sequence

>Msa0341730

ATGGCATCATCATCTAAACAAGAAACAACGGAAATAATATTCAAGTCGAAACTTCCAGACATATACATCCCCAACCATCAACCTCTTCATTCTTATTGTTTTGAAAATCTCTCCGAATTTGGTTCACGTCCATGTCTCATCAATGCCCCCACCGGAAAGGTCTACACCTACCACGACGTCCAACTCACCTCCCGTAAAGTTGCCTCTGGTCTCAACAAATTGGGACTCCAACAAGGTGAAGTCATCATGATACTCCTCCCCAATTCCCCTGAATTTGTCTTCTCCTTTCTTGGCGCTTCTTATCTCGGCGCCATAGCCACCGCAGCCAATCCTTTCTTCACGGCTGCTGAGATTGGAAAGCAAGCAAAAGCCTCCAACAGCAAGTTGATCATAACACAACAATGTTACTACGACAAAGTCAAAGATTTGTTGAACAACAATGATCATCATAAGGTGGTGGACGTGGTGTTGGTAGACTCTTCTTCTTCTTCTTCTGCCATAGATGATAATAACAATGATCATGTGCATTTCTCAACGCTGATCGAAGCAGATGAGAATGATCTTCCTGATGCAAAGATCCAGCCAGACGATGTGGTTGCGCTGCCATATTCATCAGGAACAACAGGTCTACCAAAAGGGGTGATGTTAACACACAAAGGTTTGGTGAGTAGCATAGCACAACAAGTAGATGGAGAGAATCCAAATCTATATTACAGCAGTGAAGATGTGATACTTTGTGTCCTTCCTCTGTTTCATATTTATTCACTAAACTCTGTTTTGCTCTGCGGACTCAGAGCAAAAGCTACCATTCTCTTGATGCCAAAATTCGACATAAATGCATTCTTGAATCTTGTTAACAAACATGGAGTAACAGTTGCACCGGTTGTTCCTCCGATTGTATTGGCAATAGCAAAATCACCAGATCTTAATAAGTATGATCTGTCTTCAATTAGGATATTGAAATCAGGTGGTGCTCCACTTGGTAAAGAACTTGAAGAAACTGTTAGGACTAAATTTCCAAATGCAATTCTTGGACAGGGATACGGAATGACTGAGGCGGGGCCAGTGTTAACGATGAGTTTAGCATTTGCTAAAGAACCAGTGAATGTAAAAGCAGGTGCATGTGGAACTGTTGTAAGAAATGCAGAGATGAAGATTGTGGATCCTGACACTGGTAAATCTTTACCTCGAAACCAATCTGGTGAAATCTGCATAAGAGGCGACCAAATCATGAAAGGTTATCTAAATGATCGAGAGGCAACAGAGAGAACCATAGACAAAGAAGGTTGGTTGTATACAGGTGATATTGGGTATATTGATGAAGATGATGAGTTATTCATTGTTGATAGATTGAAGGAATTAATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCTCTTCTTCTCTCTCATCCCAAAATTTCTGATGCTGCTGTTGTCCCAATGAAGGATGAAGCGGCTGGAGAGGTACCTGTTGCATTTGTGGTGAGATCAAATGGTTACACTGACTTAACTCAAGATGAAATTAAGCACTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAATCAAGTATTCTTCATTGATGCAATTCCCAAGTCACCATCAGGCAAAATCTTGCGCAAGGATTTGAGAGCAAAGCTAGCAGCAGGTGTTCCACATTGA
Protein sequence

>Msa0341730

MASSSKQETTEIIFKSKLPDIYIPNHQPLHSYCFENLSEFGSRPCLINAPTGKVYTYHDVQLTSRKVASGLNKLGLQQGEVIMILLPNSPEFVFSFLGASYLGAIATAANPFFTAAEIGKQAKASNSKLIITQQCYYDKVKDLLNNNDHHKVVDVVLVDSSSSSSAIDDNNNDHVHFSTLIEADENDLPDAKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVSSIAQQVDGENPNLYYSSEDVILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFDINAFLNLVNKHGVTVAPVVPPIVLAIAKSPDLNKYDLSSIRILKSGGAPLGKELEETVRTKFPNAILGQGYGMTEAGPVLTMSLAFAKEPVNVKAGACGTVVRNAEMKIVDPDTGKSLPRNQSGEICIRGDQIMKGYLNDREATERTIDKEGWLYTGDIGYIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGYTDLTQDEIKHFISKQVVFYKRINQVFFIDAIPKSPSGKILRKDLRAKLAAGVPH*