AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0347090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347090 MtrunA17_Chr3g0079321 96.163 443 17 0 86 528 149 591 0.0 857
Msa0347090 MtrunA17_Chr3g0079321 87.778 90 11 0 1 90 1 90 2.39e-45 168
Msa0347090 MtrunA17_Chr4g0056511 66.895 438 145 0 87 524 148 585 0.0 624
Msa0347090 MtrunA17_Chr4g0056511 58.537 82 34 0 8 89 6 87 5.71e-13 71.6
Msa0347090 MtrunA17_Chr7g0234061 61.905 441 161 4 87 523 150 587 0.0 556
Msa0347090 MtrunA17_Chr7g0234061 63.235 68 25 0 22 89 22 89 7.34e-11 64.7
Msa0347090 MtrunA17_Chr3g0143671 42.614 528 219 11 26 489 27 534 2.12e-125 377
Msa0347090 MtrunA17_Chr1g0157341 40.293 546 242 10 8 489 8 533 5.62e-119 361
Msa0347090 MtrunA17_Chr4g0024861 39.962 533 235 11 22 489 19 531 6.55e-119 360
Msa0347090 MtrunA17_Chr4g0038671 47.643 403 189 7 88 489 152 533 2.12e-118 359
Msa0347090 MtrunA17_Chr5g0402831 47.525 404 189 6 86 489 151 531 1.13e-117 357
Msa0347090 MtrunA17_Chr2g0322441 46.667 390 187 6 101 489 165 534 1.11e-112 345
Msa0347090 MtrunA17_Chr8g0374271 43.349 436 214 8 56 489 130 534 1.28e-112 344
Msa0347090 MtrunA17_Chr4g0024641 44.578 415 209 6 82 495 66 460 9.49e-111 351
Msa0347090 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 514 584 8.75e-12 68.2
Msa0347090 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 576 646 8.75e-12 68.2
Msa0347090 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 638 708 8.75e-12 68.2
Msa0347090 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 700 770 8.75e-12 68.2
Msa0347090 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 824 894 8.75e-12 68.2
Msa0347090 MtrunA17_Chr4g0024641 46.154 65 35 0 425 489 886 950 1.51e-11 67.4
Msa0347090 MtrunA17_Chr4g0024641 45.455 66 36 0 430 495 457 522 2.25e-11 66.6
Msa0347090 MtrunA17_Chr4g0024641 42.254 71 41 0 425 495 762 832 9.77e-11 64.7
Msa0347090 MtrunA17_Chr4g0075071 45.178 394 195 6 97 489 162 535 1.81e-110 339
Msa0347090 MtrunA17_Chr4g0075071 40.964 83 49 0 7 89 9 91 5.44e-11 65.1
Msa0347090 MtrunA17_Chr8g0374261 44.068 413 203 7 88 496 151 539 2.90e-108 333
Msa0347090 MtrunA17_Chr8g0374261 55.357 56 25 0 34 89 34 89 1.62e-11 66.6
Msa0347090 MtrunA17_Chr4g0043251 41.523 407 218 8 87 489 148 538 7.77e-100 311
Msa0347090 MtrunA17_Chr4g0043251 51.163 86 38 1 4 89 6 87 1.17e-11 67.4
Msa0347090 MtrunA17_Chr3g0121151 40.441 408 221 9 87 489 187 577 4.36e-96 303
Msa0347090 MtrunA17_Chr1g0197301 46.246 333 171 6 159 489 4 330 2.45e-95 293
Msa0347090 MtrunA17_Chr3g0121161 39.951 408 223 9 87 489 187 577 1.97e-94 299
Msa0347090 MtrunA17_Chr4g0043261 39.853 409 218 9 87 489 146 532 2.09e-94 297
Msa0347090 MtrunA17_Chr4g0043261 55.844 77 34 0 13 89 9 85 5.54e-11 65.1
Msa0347090 MtrunA17_Chr3g0121171 40.931 408 219 9 87 489 147 537 6.36e-91 305
Msa0347090 MtrunA17_Chr3g0121171 40.196 408 222 9 87 489 722 1112 8.16e-90 301
Msa0347090 MtrunA17_Chr3g0121171 40.196 408 222 9 87 489 1297 1687 1.13e-88 298
Msa0347090 MtrunA17_Chr3g0121171 39.659 411 220 8 87 489 1863 2253 6.55e-88 296
Msa0347090 MtrunA17_Chr5g0404361 29.176 425 256 15 91 488 205 611 2.82e-34 136
Msa0347090 MtrunA17_Chr5g0404341 28.499 393 231 16 91 453 159 531 2.80e-30 124
Msa0347090 MtrunA17_Chr4g0075781 38.636 176 78 3 88 263 21 166 5.97e-30 115
Msa0347090 MtrunA17_Chr3g0118321 25.850 441 270 17 87 489 142 563 3.32e-29 121
Msa0347090 MtrunA17_Chr5g0429511 28.756 386 238 15 91 453 152 523 6.22e-29 120
Msa0347090 MtrunA17_Chr7g0237491 28.784 403 236 15 89 453 156 545 6.47e-29 120
Msa0347090 MtrunA17_Chr7g0238941 27.692 390 250 12 91 453 159 543 2.51e-28 119
Msa0347090 MtrunA17_Chr4g0005921 24.419 516 276 17 32 453 27 522 3.66e-27 115
Msa0347090 MtrunA17_Chr7g0238351 28.141 398 248 12 88 453 155 546 4.51e-27 115
Msa0347090 MtrunA17_Chr8g0382691 25.866 433 265 12 91 489 158 568 7.74e-27 114
Msa0347090 MtrunA17_Chr8g0346581 25.326 537 304 18 10 453 4 536 1.59e-26 113
Msa0347090 MtrunA17_Chr7g0237441 26.733 404 245 15 88 453 155 545 4.26e-26 112
Msa0347090 MtrunA17_Chr5g0436461 28.244 393 230 15 91 453 149 519 1.32e-25 110
Msa0347090 MtrunA17_Chr3g0104061 23.913 506 288 16 32 453 29 521 2.52e-25 109
Msa0347090 MtrunA17_Chr3g0118331 25.986 431 259 15 96 489 155 562 1.19e-24 107
Msa0347090 MtrunA17_Chr4g0031901 25.871 402 239 13 91 453 169 550 1.52e-24 107
Msa0347090 MtrunA17_Chr7g0238981 26.076 395 258 13 88 453 169 558 2.39e-23 103
Msa0347090 MtrunA17_Chr5g0431581 27.436 390 242 13 91 453 150 525 1.54e-20 95.1
Msa0347090 MtrunA17_Chr3g0114211 25.964 389 251 15 91 453 158 535 9.60e-20 92.8
Msa0347090 MtrunA17_Chr5g0437681 25.629 437 268 19 91 488 149 567 1.45e-19 92.0
Msa0347090 MtrunA17_Chr2g0278811 26.253 419 244 17 91 453 163 572 1.50e-19 92.0
Msa0347090 MtrunA17_Chr3g0118351 23.988 346 210 8 181 489 5 334 2.07e-18 86.7
Msa0347090 MtrunA17_Chr4g0024651 49.231 65 32 1 22 85 19 83 1.17e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347090 AT4G25240.2 67.381 420 136 1 86 505 149 567 0.0 617
Msa0347090 AT4G25240.2 57.831 83 35 0 8 90 8 90 8.36e-17 84.0
Msa0347090 AT4G25240.1 67.381 420 136 1 86 505 149 567 0.0 617
Msa0347090 AT4G25240.1 57.831 83 35 0 8 90 8 90 8.36e-17 84.0
Msa0347090 AT5G51480.1 63.063 444 161 3 86 527 148 590 0.0 610
Msa0347090 AT5G51480.1 61.429 70 27 0 21 90 20 89 1.57e-18 89.4
Msa0347090 AT4G12420.1 66.033 421 143 0 87 507 146 566 0.0 598
Msa0347090 AT4G12420.1 57.303 89 34 1 1 89 1 85 1.19e-22 102
Msa0347090 AT4G12420.2 66.033 421 143 0 87 507 146 566 0.0 598
Msa0347090 AT4G12420.2 57.303 89 34 1 1 89 1 85 1.19e-22 102
Msa0347090 AT5G48450.2 56.473 448 175 7 87 528 150 583 3.93e-174 504
Msa0347090 AT5G48450.2 53.247 77 36 0 13 89 13 89 1.35e-15 80.1
Msa0347090 AT5G48450.1 56.854 445 171 7 87 523 150 581 2.58e-173 503
Msa0347090 AT5G48450.1 53.247 77 36 0 13 89 13 89 1.50e-15 80.1
Msa0347090 AT4G22010.1 48.020 404 188 7 88 489 148 531 4.11e-120 364
Msa0347090 AT1G21850.1 46.650 403 192 6 88 489 151 531 1.25e-116 355
Msa0347090 AT1G21850.1 44.304 79 44 0 11 89 11 89 6.60e-13 71.6
Msa0347090 AT1G76160.1 45.161 403 199 6 88 489 150 531 7.30e-115 350
Msa0347090 AT1G76160.1 42.045 88 49 1 2 89 3 88 1.47e-11 67.4
Msa0347090 AT1G41830.1 45.012 411 204 7 88 497 151 540 5.21e-112 343
Msa0347090 AT1G21860.1 43.812 404 204 6 87 489 150 531 7.90e-110 337
Msa0347090 AT1G21860.1 45.570 79 43 0 11 89 11 89 6.85e-14 74.7
Msa0347090 AT4G38420.1 45.966 409 194 8 88 489 152 540 8.95e-110 338
Msa0347090 AT4G38420.1 38.272 81 49 1 10 90 12 91 1.58e-11 67.4
Msa0347090 AT1G75790.1 42.482 419 209 8 86 492 147 545 1.59e-109 337
Msa0347090 AT3G13390.1 43.382 408 210 7 87 489 149 540 2.90e-109 337
Msa0347090 AT4G28090.1 45.320 406 198 10 88 489 150 535 5.91e-109 335
Msa0347090 AT1G55570.1 41.446 415 222 7 87 496 150 548 9.49e-107 330
Msa0347090 AT1G55560.1 37.982 545 251 13 15 489 10 537 9.92e-107 330
Msa0347090 AT5G66920.1 41.584 404 211 7 88 489 159 539 6.47e-103 320
Msa0347090 AT5G66920.1 52.727 55 26 0 35 89 43 97 4.78e-11 65.9
Msa0347090 AT3G13400.2 41.809 409 214 9 87 489 148 538 3.13e-102 318
Msa0347090 AT3G13400.1 41.809 409 214 9 87 489 148 538 3.13e-102 318
Msa0347090 AT4G37160.1 43.382 408 204 9 86 489 151 535 1.71e-99 311
Msa0347090 AT2G23630.2 41.606 411 218 7 86 495 155 544 2.21e-96 303
Msa0347090 AT2G23630.1 41.707 410 217 7 87 495 151 539 2.71e-96 303
Msa0347090 AT4G38420.3 45.143 350 165 8 88 430 152 481 1.54e-85 273
Msa0347090 AT4G38420.3 37.805 82 50 1 9 90 11 91 1.75e-11 67.0
Msa0347090 AT4G38420.2 43.344 323 156 8 88 403 152 454 2.22e-73 240
Msa0347090 AT4G38420.2 38.272 81 49 1 10 90 12 91 1.95e-11 66.6
Msa0347090 AT4G37160.2 40.625 320 167 8 86 403 151 449 4.67e-67 223
Msa0347090 AT4G39830.1 23.711 582 322 16 8 489 19 578 8.00e-38 147
Msa0347090 AT4G39830.4 25.000 424 267 10 101 489 63 470 4.01e-34 135
Msa0347090 AT4G39830.2 24.561 456 288 11 74 489 44 483 4.15e-34 135
Msa0347090 AT4G39830.3 24.561 456 288 11 74 489 42 481 5.30e-34 134
Msa0347090 AT5G21105.1 27.483 433 251 15 96 489 168 576 4.05e-31 127
Msa0347090 AT5G21105.3 28.718 390 220 14 96 446 168 538 6.74e-30 123
Msa0347090 AT5G21105.2 28.030 396 226 13 130 489 13 385 8.16e-30 121
Msa0347090 AT5G58910.2 25.000 540 301 20 5 453 6 532 3.18e-29 122
Msa0347090 AT5G58910.1 26.200 500 272 20 38 453 2 488 2.05e-28 119
Msa0347090 AT5G58910.3 25.838 507 272 20 38 453 38 531 5.35e-28 118
Msa0347090 AT5G48100.1 27.595 395 250 12 90 457 146 531 7.62e-28 117
Msa0347090 AT5G21100.1 23.963 434 267 12 96 489 151 561 1.97e-26 113
Msa0347090 AT5G01190.2 26.463 393 240 12 91 453 136 509 6.53e-26 111
Msa0347090 AT5G03260.1 29.695 394 224 16 91 453 151 522 9.90e-25 108
Msa0347090 AT5G60020.1 27.654 405 245 15 88 453 147 542 3.42e-24 106
Msa0347090 AT5G60020.3 27.654 405 245 15 88 453 115 510 4.20e-24 106
Msa0347090 AT5G60020.2 27.930 401 241 15 88 449 147 538 2.88e-23 103
Msa0347090 AT5G01190.1 24.953 537 298 18 8 453 1 523 3.82e-23 103
Msa0347090 AT1G18140.1 26.492 419 230 18 98 461 161 556 6.02e-23 103
Msa0347090 AT2G30210.1 27.226 393 246 14 91 453 153 535 1.56e-22 101
Msa0347090 AT2G38080.1 25.945 397 241 15 88 453 149 523 3.58e-22 100
Msa0347090 AT2G29130.1 24.688 401 247 13 91 453 155 538 1.36e-21 99.0
Msa0347090 AT2G46570.1 25.336 446 252 12 91 488 157 569 1.20e-20 95.9
Msa0347090 AT3G09220.1 25.323 387 250 12 91 448 151 527 1.73e-20 95.5
Msa0347090 AT3G09220.2 25.323 387 250 12 91 448 54 430 1.79e-20 94.7
Msa0347090 AT2G46570.2 25.336 446 252 12 91 488 72 484 1.80e-20 94.7

Find 118 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCAACGGTACATATAA+AGG 0.235380 3_1:-7989025 Msa0347090:CDS
TTGCAGGTTATAGCTATAAA+TGG 0.248006 3_1:-7992051 Msa0347090:intron
TGTTCTGTTCATCGGCTTGC+TGG 0.257454 3_1:+7989066 None:intergenic
TCTGTGTCGCCGGCTTCTTC+AGG 0.260513 3_1:+7988049 None:intergenic
GAATCTGAGAGCAGAAAATT+TGG 0.265348 3_1:-7988116 Msa0347090:CDS
TCACATCTAGTTAAAGCTTT+TGG 0.272272 3_1:-7987559 Msa0347090:exon
CTATTCAAAATGTGATTAAA+AGG 0.277027 3_1:-7987392 Msa0347090:three_prime_UTR
TAGTAATTCATATTCTTAAT+AGG 0.282613 3_1:-7987358 Msa0347090:three_prime_UTR
TAGTTGAAATTCCCACATTA+TGG 0.287649 3_1:+7990592 None:intergenic
TTCTTACCCAACAACGAAAA+AGG 0.291492 3_1:+7988937 None:intergenic
TCCACCACTGCTTCTCCTCT+TGG 0.304802 3_1:-7992958 Msa0347090:CDS
AAGTGTGATTAGTAATTTCT+TGG 0.309191 3_1:-7987491 Msa0347090:three_prime_UTR
AATAATACTCTTGTACCTAA+TGG 0.326501 3_1:-7991187 Msa0347090:CDS
TCCTCTTGGTGTTCCTCAAA+AGG 0.329327 3_1:-7992944 Msa0347090:intron
CTTGGATTTAGGATGGACTA+TGG 0.332483 3_1:-7988843 Msa0347090:intron
GTTTCATGATCTATCCCATT+AGG 0.337800 3_1:+7991172 None:intergenic
GCTATAAATGGGAAATTTCC+TGG 0.342290 3_1:-7992039 Msa0347090:CDS
TCATTATGGCAGAAGGTTAC+AGG 0.370428 3_1:-7990384 Msa0347090:CDS
ATAATACTCTTGTACCTAAT+GGG 0.372995 3_1:-7991186 Msa0347090:CDS
CTCTGTTCAAAACTTTCATC+TGG 0.374331 3_1:-7988969 Msa0347090:CDS
CGAAAGGACCCTTGAGGGTT+AGG 0.374840 3_1:+7989259 None:intergenic
TAAAACCTGACGTTCCGTTT+CGG 0.375200 3_1:-7989135 Msa0347090:CDS
GGTTTGTGAATGAATCATTA+TGG 0.383149 3_1:-7990398 Msa0347090:CDS
AATTCCAAGGGTGGAGCATC+TGG 0.393938 3_1:-7990339 Msa0347090:CDS
CCAGATGGTGTTCTTATCAA+TGG 0.394586 3_1:-7991229 Msa0347090:CDS
AGTAGTCTGTACTTGCGTTC+TGG 0.398114 3_1:+7990439 None:intergenic
TCAAAATCATAATCTATTGC+TGG 0.416012 3_1:-7990553 Msa0347090:CDS
TCACCGTCGGGCTGCGCAAA+AGG 0.416320 3_1:+7991442 None:intergenic
CAAGAAACACTTACAATAAG+TGG 0.417064 3_1:-7988803 Msa0347090:CDS
CTAACCCTCAAGGGTCCTTT+CGG 0.421813 3_1:-7989258 Msa0347090:CDS
CCACATTATGGACACGAATT+CGG 0.426819 3_1:+7990604 None:intergenic
GTTCAAAACTTTCATCTGGA+TGG 0.433014 3_1:-7988965 Msa0347090:CDS
ACAACTCGAGCTGCAATTAA+CGG 0.437704 3_1:-7989169 Msa0347090:CDS
TGGAGCATGGACAGCAATCC+TGG 0.442003 3_1:-7988164 Msa0347090:CDS
ATCACTGGTGTTCTGTTCAT+CGG 0.467144 3_1:+7989058 None:intergenic
TCATCAACGGTACATATAAA+GGG 0.471123 3_1:-7989024 Msa0347090:CDS
AGGATTGCTGTCCATGCTCC+AGG 0.473930 3_1:+7988166 None:intergenic
GTTCTGTTCATCGGCTTGCT+GGG 0.478544 3_1:+7989067 None:intergenic
TCATCTGGTGGTGGTGGCAG+AGG 0.480319 3_1:+7990315 None:intergenic
AGAGTATTATTGTACTGATA+AGG 0.480921 3_1:+7991199 None:intergenic
TGCAGGTTATAGCTATAAAT+GGG 0.486118 3_1:-7992050 Msa0347090:intron
TACTAATCACACTTCTTGAC+AGG 0.487280 3_1:+7987500 None:intergenic
CAGATGGTGTTCTTATCAAT+GGG 0.490691 3_1:-7991228 Msa0347090:CDS
TTCCCATGAGCAATGTGAAA+AGG 0.492544 3_1:+7987594 None:intergenic
GCAAGCCGAAACGGAACGTC+AGG 0.492678 3_1:+7989130 None:intergenic
AGGACCAGATGCTCCACCCT+TGG 0.494547 3_1:+7990335 None:intergenic
CTCTAGACAATGTTGGATCA+TGG 0.498904 3_1:-7988138 Msa0347090:CDS
TTTACACTACTCAAATTCCA+AGG 0.507295 3_1:-7990352 Msa0347090:CDS
TTCAAAACTTTCATCTGGAT+GGG 0.517941 3_1:-7988964 Msa0347090:CDS
ACCAACTTTGATATTCATGC+TGG 0.519723 3_1:-7990492 Msa0347090:CDS
GAAACAATTACTGTTGATCC+AGG 0.523157 3_1:-7991154 Msa0347090:intron
GCTCTAAGATCAACACTTGA+CGG 0.523581 3_1:-7991271 Msa0347090:CDS
TGAAGTTCTGTGTAAACAGT+TGG 0.529500 3_1:+7992988 None:intergenic
ACCAAGAGGAGAAGCAGTGG+TGG 0.530783 3_1:+7992957 None:intergenic
CCGAATTCGTGTCCATAATG+TGG 0.531461 3_1:-7990604 Msa0347090:CDS
GCTGACAACAATCAGCTAAG+AGG 0.532345 3_1:-7989109 Msa0347090:CDS
ATTAGTAATTTCTTGGTCTG+AGG 0.532746 3_1:-7987484 Msa0347090:three_prime_UTR
GCAGATTCTACTTTGAGAAG+TGG 0.534225 3_1:-7987620 Msa0347090:CDS
CCATTGATAAGAACACCATC+TGG 0.534528 3_1:+7991229 None:intergenic
TGCACCAGTCTCTGTGTCGC+CGG 0.537437 3_1:+7988039 None:intergenic
AGAGCAGAAAAGAGTAGGAC+TGG 0.537825 3_1:+7990469 None:intergenic
TGAAGGGTATTACACCGATC+AGG 0.538222 3_1:-7990523 Msa0347090:CDS
GAAGCCGGCGACACAGAGAC+TGG 0.541009 3_1:-7988043 Msa0347090:CDS
GTCTGTACTTGCGTTCTGGT+CGG 0.542837 3_1:+7990443 None:intergenic
TTTGTAGTAACATTAATCAC+AGG 0.544812 3_1:+7992015 None:intergenic
TTGTTGTCAGCAAGCCGAAA+CGG 0.546970 3_1:+7989121 None:intergenic
CGTACCGAAAGGACCCTTGA+GGG 0.550715 3_1:+7989254 None:intergenic
CATAATGAAAATTTCACCGT+CGG 0.555555 3_1:+7991429 None:intergenic
GTTGTGCCGTTGATCGCCAC+CGG 0.555618 3_1:+7989187 None:intergenic
ATAATGAAAATTTCACCGTC+GGG 0.559708 3_1:+7991430 None:intergenic
GTAACATTAATCACAGGTCC+AGG 0.563672 3_1:+7992021 None:intergenic
AGTGAATGTGTATAATCAGC+TGG 0.564829 3_1:-7991980 Msa0347090:CDS
CGAATTCGTGTCCATAATGT+GGG 0.565215 3_1:-7990603 Msa0347090:CDS
ATGATTGATCTATCAATCAC+TGG 0.566439 3_1:+7989043 None:intergenic
GTTGGTGTAATTTGCCTGAT+CGG 0.567425 3_1:+7990509 None:intergenic
GCCAGCATGAATATCAAAGT+TGG 0.570786 3_1:+7990491 None:intergenic
ACAGCACCGGTGGCGATCAA+CGG 0.572276 3_1:-7989193 Msa0347090:CDS
TGAGAGCAGAAAATTTGGAC+AGG 0.573207 3_1:-7988111 Msa0347090:CDS
TGTACTTGCGTTCTGGTCGG+TGG 0.574019 3_1:+7990446 None:intergenic
CTTGTTAAAGGTTACAGCAC+CGG 0.575674 3_1:-7989206 Msa0347090:CDS
CCAGAAAATGTTCTATATTG+CGG 0.576586 3_1:-7988016 Msa0347090:CDS
CTTGACGGTGGAAAAGACCT+TGG 0.578216 3_1:-7991256 Msa0347090:CDS
AATATCTCGCAGCACAACTC+AGG 0.579985 3_1:-7988775 Msa0347090:intron
TGGTGTTCTTATCAATGGGA+AGG 0.580003 3_1:-7991224 Msa0347090:CDS
AAGAAACACTTACAATAAGT+GGG 0.581952 3_1:-7988802 Msa0347090:CDS
TTAGGATGGACTATGGCGAT+TGG 0.582570 3_1:-7988836 Msa0347090:intron
ATTGTCAATCCTGAAGAAGC+CGG 0.584686 3_1:-7988058 Msa0347090:CDS
CACTACTCAAATTCCAAGGG+TGG 0.584854 3_1:-7990348 Msa0347090:CDS
ACTATATTGTTGCAAGTGCG+AGG 0.588609 3_1:-7990419 Msa0347090:CDS
AACACCAAGAGGAGAAGCAG+TGG 0.595232 3_1:+7992954 None:intergenic
GGTGGAGAGCAGAAAAGAGT+AGG 0.595801 3_1:+7990464 None:intergenic
CTGGTGTCTCTAGACAATGT+TGG 0.597006 3_1:-7988145 Msa0347090:CDS
TTACACTACTCAAATTCCAA+GGG 0.598552 3_1:-7990351 Msa0347090:CDS
GAGCTCGTCCTAACCCTCAA+GGG 0.599281 3_1:-7989267 Msa0347090:CDS
GAGCAGAAAATTTGGACAGG+TGG 0.600104 3_1:-7988108 Msa0347090:CDS
AATTTGGACAGGTGGTACCT+AGG 0.611380 3_1:-7988100 Msa0347090:CDS
TCAGATAAGTTTCTTGACCT+AGG 0.612670 3_1:+7988083 None:intergenic
GAACACCATCTGGTATTCCA+AGG 0.613050 3_1:+7991239 None:intergenic
TTGAAAACAGAGCAATGTTG+AGG 0.615325 3_1:+7993031 None:intergenic
GGTGTTCTTATCAATGGGAA+GGG 0.615393 3_1:-7991223 Msa0347090:CDS
GGAGCTCGTCCTAACCCTCA+AGG 0.616297 3_1:-7989268 Msa0347090:CDS
CCTCAAGGGTCCTTTCGGTA+CGG 0.617590 3_1:-7989253 Msa0347090:CDS
CTATTGCTGGTAGAAACTGA+AGG 0.617963 3_1:-7990540 Msa0347090:CDS
GAATGAATCATTATGGCAGA+AGG 0.620430 3_1:-7990391 Msa0347090:CDS
CTTGATTGAGCCGTACCGAA+AGG 0.621022 3_1:+7989243 None:intergenic
TATTGCTGGTAGAAACTGAA+GGG 0.621251 3_1:-7990539 Msa0347090:CDS
ATGAAGATCTTCTCATAACA+TGG 0.639852 3_1:-7991957 Msa0347090:intron
CAACATTGTCTAGAGACACC+AGG 0.642184 3_1:+7988146 None:intergenic
AGGCTAAACACATCTGCAAG+TGG 0.642227 3_1:-7989289 Msa0347090:CDS
AAAGACCTTGGAATACCAGA+TGG 0.643410 3_1:-7991244 Msa0347090:CDS
ATTGATAGATCAATCATCAA+CGG 0.647112 3_1:-7989037 Msa0347090:CDS
GTTAAAGGTTACAGCACCGG+TGG 0.660172 3_1:-7989203 Msa0347090:CDS
TAGGTCAAGAAACTTATCTG+AGG 0.669852 3_1:-7988081 Msa0347090:CDS
TTGGTATACTCAAGACTACA+CGG 0.674976 3_1:-7991398 Msa0347090:intron
TATACACATTCACTACCACA+TGG 0.678509 3_1:+7991989 None:intergenic
CTAAGATCAACACTTGACGG+TGG 0.682768 3_1:-7991268 Msa0347090:CDS
CCGTACCGAAAGGACCCTTG+AGG 0.699100 3_1:+7989253 None:intergenic
TGTTACTACAAATAACCATG+TGG 0.734997 3_1:-7992004 Msa0347090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGCTTAAATTAAAAAATTA+GGG + chr3_1:7988173-7988192 None:intergenic 10.0%
!! TTAGCTTAAATTAAAAAATT+AGG + chr3_1:7988174-7988193 None:intergenic 10.0%
!!! TTTTCTAATGATTTTAATTT+AGG - chr3_1:7991736-7991755 Msa0347090:intron 10.0%
!!! TTTCTAATGATTTTAATTTA+GGG - chr3_1:7991737-7991756 Msa0347090:intron 10.0%
!!! TTTTTTGAAAGAAAGAAAAA+AGG + chr3_1:7987611-7987630 None:intergenic 15.0%
!!! CTTTTTAAACATATTTGAAA+GGG + chr3_1:7987989-7988008 None:intergenic 15.0%
!!! ACTTTTTAAACATATTTGAA+AGG + chr3_1:7987990-7988009 None:intergenic 15.0%
!!! AAAAAGTGTAAATTTGAAAA+AGG - chr3_1:7988003-7988022 Msa0347090:CDS 15.0%
!!! TGTTGATTATGATAATAATA+TGG - chr3_1:7988359-7988378 Msa0347090:intron 15.0%
!! TATGTTTGTTTGATAAATAT+AGG - chr3_1:7989151-7989170 Msa0347090:CDS 15.0%
!! ATATCATATCATTATTTGTA+CGG + chr3_1:7989385-7989404 None:intergenic 15.0%
!!! GAATTACAAATATATTTTTC+AGG - chr3_1:7989808-7989827 Msa0347090:intron 15.0%
!!! CATTATTTCTTAAGTATTTT+TGG - chr3_1:7990259-7990278 Msa0347090:intron 15.0%
!!! GGATCTTTTTATAATATAAA+AGG - chr3_1:7990280-7990299 Msa0347090:CDS 15.0%
!! TATAAAATATGGTCAAATAA+TGG - chr3_1:7990493-7990512 Msa0347090:CDS 15.0%
!! TACAAAATATTGTTAAATAG+TGG - chr3_1:7990834-7990853 Msa0347090:intron 15.0%
!!! GTGCTTTTTAAAATAAATTA+AGG - chr3_1:7991856-7991875 Msa0347090:intron 15.0%
!! TAGTAATTCATATTCTTAAT+AGG - chr3_1:7993086-7993105 Msa0347090:exon 15.0%
!!! TCAAAAAAGTGTTGTTTTTT+TGG - chr3_1:7987623-7987642 Msa0347090:CDS 20.0%
!!! CAAAAAAGTGTTGTTTTTTT+GGG - chr3_1:7987624-7987643 Msa0347090:CDS 20.0%
!!! AATGATCAATTTTTTTGTGT+TGG - chr3_1:7987827-7987846 Msa0347090:intron 20.0%
!!! AATTTTTGTTGTGTTTCTTA+TGG - chr3_1:7987943-7987962 Msa0347090:intron 20.0%
!! GCACAAAAAAAATAAAATTG+GGG + chr3_1:7988151-7988170 None:intergenic 20.0%
!! GGCACAAAAAAAATAAAATT+GGG + chr3_1:7988152-7988171 None:intergenic 20.0%
!! TAAGATAAAAAAGAAGAGAT+AGG - chr3_1:7988659-7988678 Msa0347090:intron 20.0%
!! AATTGGACAATAAAAGTTAA+TGG + chr3_1:7989327-7989346 None:intergenic 20.0%
!!! TTAACTTTTATTGTCCAATT+TGG - chr3_1:7989327-7989346 Msa0347090:intron 20.0%
!!! GAAGAATAAGATATAGTTTT+TGG + chr3_1:7989542-7989561 None:intergenic 20.0%
!! AATCAAGGATATAAGAAAAA+GGG + chr3_1:7989648-7989667 None:intergenic 20.0%
!! AAATCAAGGATATAAGAAAA+AGG + chr3_1:7989649-7989668 None:intergenic 20.0%
!!! ATTTTGAATTCGAAAGTTTA+AGG + chr3_1:7989878-7989897 None:intergenic 20.0%
!!! AACAAATATCTATTGTTTCT+GGG - chr3_1:7990457-7990476 Msa0347090:CDS 20.0%
!! ATGCTATTCAGTATAAAATA+TGG - chr3_1:7990482-7990501 Msa0347090:CDS 20.0%
!!! AGGTAATAATAATTCAGTTT+TGG + chr3_1:7990592-7990611 None:intergenic 20.0%
!! ATATAACAATTTACAAGAGT+GGG - chr3_1:7990632-7990651 Msa0347090:intron 20.0%
!! AAAATCTGTTAGTGTTATAT+CGG + chr3_1:7990868-7990887 None:intergenic 20.0%
!!! TATATTTAGTTCTAATGACT+CGG - chr3_1:7991014-7991033 Msa0347090:intron 20.0%
!!! TACTGATTTTTACTTGTTAA+AGG - chr3_1:7991226-7991245 Msa0347090:CDS 20.0%
!!! ATTTGTAACAATTGATTTCT+TGG - chr3_1:7991583-7991602 Msa0347090:intron 20.0%
!! AATCATTTGAAAAAAACCTA+AGG + chr3_1:7991803-7991822 None:intergenic 20.0%
!!! ATTTTTTCTCGTTAATTAGA+TGG - chr3_1:7991884-7991903 Msa0347090:intron 20.0%
!! TTATAAATCTTCAATTCCTA+GGG - chr3_1:7992210-7992229 Msa0347090:intron 20.0%
!! AAAAATAGACTTGTAACAAA+CGG + chr3_1:7992512-7992531 None:intergenic 20.0%
!!! GTTTTTTGTTCTTTTAGTTA+TGG - chr3_1:7992995-7993014 Msa0347090:CDS 20.0%
!! CTATTCAAAATGTGATTAAA+AGG - chr3_1:7993052-7993071 Msa0347090:CDS 20.0%
!! ATTCTCACAATTTTCAACAA+TGG - chr3_1:7987359-7987378 Msa0347090:three_prime_UTR 25.0%
!! TTCTCACAATTTTCAACAAT+GGG - chr3_1:7987360-7987379 Msa0347090:three_prime_UTR 25.0%
!!! TTTAAGCTTGTTTTTTCATC+TGG - chr3_1:7987557-7987576 Msa0347090:exon 25.0%
!!! TTAAGCTTGTTTTTTCATCT+GGG - chr3_1:7987558-7987577 Msa0347090:exon 25.0%
!!! CAAAAAAGGACTCATTTTTA+TGG + chr3_1:7987664-7987683 None:intergenic 25.0%
!!! TTTGATTCTGAGGTTAAAAA+AGG - chr3_1:7987885-7987904 Msa0347090:intron 25.0%
!!! TTGATTCTGAGGTTAAAAAA+GGG - chr3_1:7987886-7987905 Msa0347090:intron 25.0%
! GGGCACAAAAAAAATAAAAT+TGG + chr3_1:7988153-7988172 None:intergenic 25.0%
! TTTGTAGTAACATTAATCAC+AGG + chr3_1:7988432-7988451 None:intergenic 25.0%
!!! CAAAATTTTGATGTTTACTG+CGG - chr3_1:7988590-7988609 Msa0347090:intron 25.0%
! AAATAACATACAGAAACCAA+AGG + chr3_1:7988619-7988638 None:intergenic 25.0%
!!! GTATGTTATTTTGAAATGTG+TGG - chr3_1:7988628-7988647 Msa0347090:intron 25.0%
! TGCAAGTATATGAATAACAA+TGG + chr3_1:7988743-7988762 None:intergenic 25.0%
!! GGTGAAATTTTCATTATGAT+TGG - chr3_1:7989020-7989039 Msa0347090:CDS 25.0%
!!! TTTTCATTATGATTGGTGAT+TGG - chr3_1:7989027-7989046 Msa0347090:CDS 25.0%
!! AGAGTATTATTGTACTGATA+AGG + chr3_1:7989248-7989267 None:intergenic 25.0%
! AATAATACTCTTGTACCTAA+TGG - chr3_1:7989257-7989276 Msa0347090:CDS 25.0%
! ATAATACTCTTGTACCTAAT+GGG - chr3_1:7989258-7989277 Msa0347090:CDS 25.0%
! GAAAAAGACTAATACCAAAT+TGG + chr3_1:7989344-7989363 None:intergenic 25.0%
! AGCTTCTAAATGAAACATTT+CGG + chr3_1:7989673-7989692 None:intergenic 25.0%
! TATATTATTCAGCAAGTTGT+TGG - chr3_1:7989759-7989778 Msa0347090:intron 25.0%
! TCAAAATCATAATCTATTGC+TGG - chr3_1:7989891-7989910 Msa0347090:intron 25.0%
! TTGTTATAAAAATCATCTGG+TGG + chr3_1:7990144-7990163 None:intergenic 25.0%
!! ACCAGATGATTTTTATAACA+AGG - chr3_1:7990143-7990162 Msa0347090:intron 25.0%
!! CCAGATGATTTTTATAACAA+GGG - chr3_1:7990144-7990163 Msa0347090:intron 25.0%
! GAACAAATATCTATTGTTTC+TGG - chr3_1:7990456-7990475 Msa0347090:CDS 25.0%
! GATATAACAATTTACAAGAG+TGG - chr3_1:7990631-7990650 Msa0347090:intron 25.0%
! TGACAACTTCATTAACATAT+TGG - chr3_1:7990724-7990743 Msa0347090:intron 25.0%
! TGGAGTGTAAAATATAAATG+TGG - chr3_1:7990959-7990978 Msa0347090:intron 25.0%
!! GAGTTTTGCTAAAAAGATTA+TGG - chr3_1:7990983-7991002 Msa0347090:intron 25.0%
! ATTGATAGATCAATCATCAA+CGG - chr3_1:7991407-7991426 Msa0347090:CDS 25.0%
!! ACAATTGATTTCTTGGATTT+AGG - chr3_1:7991590-7991609 Msa0347090:intron 25.0%
!! GTAAGTGTTTCTTGAATTTT+CGG + chr3_1:7991635-7991654 None:intergenic 25.0%
! AAGAAACACTTACAATAAGT+GGG - chr3_1:7991642-7991661 Msa0347090:intron 25.0%
! AGTGCCATCTAATTAAAAAA+GGG + chr3_1:7992092-7992111 None:intergenic 25.0%
! TAGTGCCATCTAATTAAAAA+AGG + chr3_1:7992093-7992112 None:intergenic 25.0%
! ATGTAAAAGTTACAAGCATT+TGG - chr3_1:7992120-7992139 Msa0347090:intron 25.0%
! ACCTAATACATAAATACCTT+TGG - chr3_1:7992154-7992173 Msa0347090:intron 25.0%
!!! TCCAAAGGTATTTATGTATT+AGG + chr3_1:7992158-7992177 None:intergenic 25.0%
! TAATACATAAATACCTTTGG+AGG - chr3_1:7992157-7992176 Msa0347090:intron 25.0%
! AATACATAAATACCTTTGGA+GGG - chr3_1:7992158-7992177 Msa0347090:intron 25.0%
! GTTATAAATCTTCAATTCCT+AGG - chr3_1:7992209-7992228 Msa0347090:intron 25.0%
! TATAAATCTTCAATTCCTAG+GGG - chr3_1:7992211-7992230 Msa0347090:intron 25.0%
! AAAATAGACTTGTAACAAAC+GGG + chr3_1:7992511-7992530 None:intergenic 25.0%
! AAGTGTGATTAGTAATTTCT+TGG - chr3_1:7992953-7992972 Msa0347090:CDS 25.0%
TTTACTTGTGAGAATGAATG+TGG + chr3_1:7987314-7987333 None:intergenic 30.0%
!! TTTTCAACTCTCTGTTTTTC+TGG - chr3_1:7987429-7987448 Msa0347090:three_prime_UTR 30.0%
ACAAGCTTAAAAGAACGAAA+TGG + chr3_1:7987548-7987567 None:intergenic 30.0%
TCAGCAGAAACAAACAAAAA+AGG + chr3_1:7987678-7987697 None:intergenic 30.0%
CATATAACAAAGTGAAACAG+AGG + chr3_1:7987793-7987812 None:intergenic 30.0%
GTTGAGATTGTATGTGTAAA+TGG - chr3_1:7987862-7987881 Msa0347090:intron 30.0%
TATGGTTAAATTCTGATTGC+AGG - chr3_1:7988377-7988396 Msa0347090:intron 30.0%
TTGCAGGTTATAGCTATAAA+TGG - chr3_1:7988393-7988412 Msa0347090:intron 30.0%
TGCAGGTTATAGCTATAAAT+GGG - chr3_1:7988394-7988413 Msa0347090:intron 30.0%
TGTTACTACAAATAACCATG+TGG - chr3_1:7988440-7988459 Msa0347090:intron 30.0%
ATGAAGATCTTCTCATAACA+TGG - chr3_1:7988487-7988506 Msa0347090:intron 30.0%
AACACATACTATGTCACATT+CGG - chr3_1:7988690-7988709 Msa0347090:intron 30.0%
! TGAGAAAAAATGTTTGTTGC+AGG - chr3_1:7988775-7988794 Msa0347090:intron 30.0%
! TTTCAAGTGAAGGATCAAAT+AGG - chr3_1:7988888-7988907 Msa0347090:intron 30.0%
TTCAAGTGAAGGATCAAATA+GGG - chr3_1:7988889-7988908 Msa0347090:intron 30.0%
! TCCCTTTGTTATCAACAATA+GGG - chr3_1:7988965-7988984 Msa0347090:CDS 30.0%
!! TCCCTATTGTTGATAACAAA+GGG + chr3_1:7988969-7988988 None:intergenic 30.0%
ATAATGAAAATTTCACCGTC+GGG + chr3_1:7989017-7989036 None:intergenic 30.0%
CATAATGAAAATTTCACCGT+CGG + chr3_1:7989018-7989037 None:intergenic 30.0%
TTAATGGCGATAAAAATACC+TGG + chr3_1:7989311-7989330 None:intergenic 30.0%
TTATTTGTACGGCATGAAAA+TGG + chr3_1:7989374-7989393 None:intergenic 30.0%
CCAGTGGAAAAATTGAAAAT+GGG + chr3_1:7989453-7989472 None:intergenic 30.0%
ACCAGTGGAAAAATTGAAAA+TGG + chr3_1:7989454-7989473 None:intergenic 30.0%
!!! CAATTTTTCCACTGGTTTAT+TGG - chr3_1:7989458-7989477 Msa0347090:intron 30.0%
AAATTACTTTACAGAGAGTG+AGG + chr3_1:7989506-7989525 None:intergenic 30.0%
TGAAACATTTCGGAAAATCA+AGG + chr3_1:7989663-7989682 None:intergenic 30.0%
GCTGACTATATCATATAGAA+TGG - chr3_1:7989690-7989709 Msa0347090:intron 30.0%
! ATAACTCTAAAAGTAGTCTG+TGG + chr3_1:7989742-7989761 None:intergenic 30.0%
TAGTTGAAATTCCCACATTA+TGG + chr3_1:7989855-7989874 None:intergenic 30.0%
GGTTTGTGAATGAATCATTA+TGG - chr3_1:7990046-7990065 Msa0347090:intron 30.0%
TTTACACTACTCAAATTCCA+AGG - chr3_1:7990092-7990111 Msa0347090:intron 30.0%
TTACACTACTCAAATTCCAA+GGG - chr3_1:7990093-7990112 Msa0347090:intron 30.0%
TTATAAAAATCATCTGGTGG+TGG + chr3_1:7990141-7990160 None:intergenic 30.0%
! CCCTTGTTATAAAAATCATC+TGG + chr3_1:7990147-7990166 None:intergenic 30.0%
! TCTAAGTTAAGTGCAGTTTT+AGG - chr3_1:7990335-7990354 Msa0347090:CDS 30.0%
TGGTCAAATAATGGCTATAT+CGG - chr3_1:7990502-7990521 Msa0347090:CDS 30.0%
! TTGATCAAACTGCAATTTTC+TGG - chr3_1:7990554-7990573 Msa0347090:CDS 30.0%
TTAGTTGATTAACCTCACAA+GGG + chr3_1:7990670-7990689 None:intergenic 30.0%
TGATAACAAATTTCCTTGTG+AGG - chr3_1:7990700-7990719 Msa0347090:intron 30.0%
TTAAATAGGCAACGAAATAG+CGG - chr3_1:7990788-7990807 Msa0347090:intron 30.0%
ATGATTGATCTATCAATCAC+TGG + chr3_1:7991404-7991423 None:intergenic 30.0%
ATCATCAACGGTACATATAA+AGG - chr3_1:7991419-7991438 Msa0347090:CDS 30.0%
TCATCAACGGTACATATAAA+GGG - chr3_1:7991420-7991439 Msa0347090:CDS 30.0%
TTCAAAACTTTCATCTGGAT+GGG - chr3_1:7991480-7991499 Msa0347090:intron 30.0%
TAGTAAGAAGAGAAAGTGAA+AGG + chr3_1:7991539-7991558 None:intergenic 30.0%
TTGATTTCTTGGATTTAGGA+TGG - chr3_1:7991594-7991613 Msa0347090:intron 30.0%
CAAGAAACACTTACAATAAG+TGG - chr3_1:7991641-7991660 Msa0347090:intron 30.0%
TTTACTAAGGACATGTTTCA+TGG - chr3_1:7991764-7991783 Msa0347090:intron 30.0%
!!! TGGTTTTAAAAGAGTTCCTT+AGG - chr3_1:7991784-7991803 Msa0347090:intron 30.0%
!!! GTTGCCCTTTTTTAATTAGA+TGG - chr3_1:7992085-7992104 Msa0347090:intron 30.0%
CCAGAAAATGTTCTATATTG+CGG - chr3_1:7992428-7992447 Msa0347090:intron 30.0%
!! ACTTTTGTTTGTATTGGAGA+GGG + chr3_1:7992454-7992473 None:intergenic 30.0%
!! TACTTTTGTTTGTATTGGAG+AGG + chr3_1:7992455-7992474 None:intergenic 30.0%
!!! GAGGTTACTTTTGTTTGTAT+TGG + chr3_1:7992460-7992479 None:intergenic 30.0%
! AAACGAGTATCTCTTTTGAT+TGG - chr3_1:7992608-7992627 Msa0347090:intron 30.0%
! TCACATCTAGTTAAAGCTTT+TGG - chr3_1:7992885-7992904 Msa0347090:intron 30.0%
ATTAGTAATTTCTTGGTCTG+AGG - chr3_1:7992960-7992979 Msa0347090:CDS 30.0%
! CTTACTTTGTACACATTTTC+TGG - chr3_1:7993018-7993037 Msa0347090:CDS 30.0%
! AAAAGTTTTGCTTGTTCCAT+TGG - chr3_1:7993161-7993180 Msa0347090:five_prime_UTR 30.0%
TTGAAAACAGAGCAATGTTG+AGG + chr3_1:7987416-7987435 None:intergenic 35.0%
TGAAGTTCTGTGTAAACAGT+TGG + chr3_1:7987459-7987478 None:intergenic 35.0%
TGGAATCAGAAAAGCAAAGA+AGG + chr3_1:7987528-7987547 None:intergenic 35.0%
!! TTGTTTGTTTCTGCTGAAAG+TGG - chr3_1:7987681-7987700 Msa0347090:intron 35.0%
GTGTAAATGGTTTGATTCTG+AGG - chr3_1:7987875-7987894 Msa0347090:intron 35.0%
! GTTTGTGATTTTGTGACTGA+TGG - chr3_1:7988061-7988080 Msa0347090:CDS 35.0%
TCACCATTGAAATCACACAA+GGG + chr3_1:7988096-7988115 None:intergenic 35.0%
ATCACCATTGAAATCACACA+AGG + chr3_1:7988097-7988116 None:intergenic 35.0%
ATTCCGATTCATATCACAGT+AGG + chr3_1:7988291-7988310 None:intergenic 35.0%
GCTATAAATGGGAAATTTCC+TGG - chr3_1:7988405-7988424 Msa0347090:intron 35.0%
TATACACATTCACTACCACA+TGG + chr3_1:7988458-7988477 None:intergenic 35.0%
AGTGAATGTGTATAATCAGC+TGG - chr3_1:7988464-7988483 Msa0347090:intron 35.0%
ATTGTCCAATTCCTTCGAAA+TGG - chr3_1:7988850-7988869 Msa0347090:intron 35.0%
CAATTCCATTTCGAAGGAAT+TGG + chr3_1:7988858-7988877 None:intergenic 35.0%
CAATTCCTTCGAAATGGAAT+TGG - chr3_1:7988856-7988875 Msa0347090:intron 35.0%
! CTCTTTGGAAATTAGTGGAA+GGG + chr3_1:7988929-7988948 None:intergenic 35.0%
! AGAAGCTCTTTGGAAATTAG+TGG + chr3_1:7988934-7988953 None:intergenic 35.0%
ACTAATTTCCAAAGAGCTTC+TGG - chr3_1:7988933-7988952 Msa0347090:intron 35.0%
! GTCCCTTTGTTATCAACAAT+AGG - chr3_1:7988964-7988983 Msa0347090:CDS 35.0%
!! CTCCCTATTGTTGATAACAA+AGG + chr3_1:7988970-7988989 None:intergenic 35.0%
TTGGTATACTCAAGACTACA+CGG - chr3_1:7989046-7989065 Msa0347090:CDS 35.0%
CAGATGGTGTTCTTATCAAT+GGG - chr3_1:7989216-7989235 Msa0347090:CDS 35.0%
GTTTCATGATCTATCCCATT+AGG + chr3_1:7989275-7989294 None:intergenic 35.0%
GAAACAATTACTGTTGATCC+AGG - chr3_1:7989290-7989309 Msa0347090:CDS 35.0%
GGAAAAATTGAAAATGGGTG+TGG + chr3_1:7989448-7989467 None:intergenic 35.0%
! CCCATTTTCAATTTTTCCAC+TGG - chr3_1:7989450-7989469 Msa0347090:intron 35.0%
AACTCAAACCAATAAACCAG+TGG + chr3_1:7989469-7989488 None:intergenic 35.0%
ATTCAGCAAGTTGTTGGAAT+TGG - chr3_1:7989765-7989784 Msa0347090:intron 35.0%
TATTGCTGGTAGAAACTGAA+GGG - chr3_1:7989905-7989924 Msa0347090:intron 35.0%
ACCAACTTTGATATTCATGC+TGG - chr3_1:7989952-7989971 Msa0347090:intron 35.0%
GAATGAATCATTATGGCAGA+AGG - chr3_1:7990053-7990072 Msa0347090:intron 35.0%
!! TGAACCAAGCAAAAAGTATC+AGG - chr3_1:7990175-7990194 Msa0347090:intron 35.0%
!! CAAACCTGATACTTTTTGCT+TGG + chr3_1:7990182-7990201 None:intergenic 35.0%
CTTAGAATCTGATGTCATAG+AGG - chr3_1:7990205-7990224 Msa0347090:intron 35.0%
TCATAGAGGATTATATCGCA+TGG - chr3_1:7990219-7990238 Msa0347090:intron 35.0%
! TAGACTATAGTTCTATAGCG+TGG - chr3_1:7990425-7990444 Msa0347090:CDS 35.0%
!!! TAATTCAGTTTTGGCTAACG+CGG + chr3_1:7990583-7990602 None:intergenic 35.0%
TTATATCCGTAACGCAAAGT+AGG + chr3_1:7990618-7990637 None:intergenic 35.0%
TGATAACAAATTCCCTTGTG+AGG - chr3_1:7990655-7990674 Msa0347090:intron 35.0%
GTTAGTTGATTAACCTCACA+AGG + chr3_1:7990671-7990690 None:intergenic 35.0%
TTTAACAACACTGCTGCAAA+AGG + chr3_1:7990773-7990792 None:intergenic 35.0%
! TTGCAGCAGTGTTGTTAAAT+AGG - chr3_1:7990774-7990793 Msa0347090:intron 35.0%
TTGTCAGTCGCATAAAATAG+CGG + chr3_1:7990898-7990917 None:intergenic 35.0%
! TAATGACTCGGAATGATCAA+GGG - chr3_1:7991026-7991045 Msa0347090:intron 35.0%
TTTACATCATGATGCTGAGT+AGG - chr3_1:7991135-7991154 Msa0347090:intron 35.0%
!!! CAGATGAAAGTTTTGAACAG+AGG + chr3_1:7991477-7991496 None:intergenic 35.0%
CTCTGTTCAAAACTTTCATC+TGG - chr3_1:7991475-7991494 Msa0347090:intron 35.0%
GTTCAAAACTTTCATCTGGA+TGG - chr3_1:7991479-7991498 Msa0347090:intron 35.0%
TTCTTACCCAACAACGAAAA+AGG + chr3_1:7991510-7991529 None:intergenic 35.0%
! AATTTAGGGCCTGTTTACTA+AGG - chr3_1:7991751-7991770 Msa0347090:intron 35.0%
GAAACATGTCCTTAGTAAAC+AGG + chr3_1:7991763-7991782 None:intergenic 35.0%
TTAATTAGATGGCACTACTG+AGG - chr3_1:7991895-7991914 Msa0347090:intron 35.0%
TAATTAGATGGCACTACTGA+GGG - chr3_1:7991896-7991915 Msa0347090:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr3_1:7991993-7992012 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr3_1:7991992-7992011 Msa0347090:CDS 35.0%
CTAATTAAAAAAGGGCAACC+CGG + chr3_1:7992084-7992103 None:intergenic 35.0%
TTGTAAAATACTCCCTCCAA+AGG + chr3_1:7992173-7992192 None:intergenic 35.0%
GAATCTGAGAGCAGAAAATT+TGG - chr3_1:7992328-7992347 Msa0347090:intron 35.0%
TCAGATAAGTTTCTTGACCT+AGG + chr3_1:7992364-7992383 None:intergenic 35.0%
TAGGTCAAGAAACTTATCTG+AGG - chr3_1:7992363-7992382 Msa0347090:intron 35.0%
! CCGCAATATAGAACATTTTC+TGG + chr3_1:7992431-7992450 None:intergenic 35.0%
ACTGTCAATGGAAAAATGAG+AGG + chr3_1:7992479-7992498 None:intergenic 35.0%
! TTCCTTTTCACATTGCTCAT+GGG - chr3_1:7992848-7992867 Msa0347090:intron 35.0%
! CATCTAGTTAAAGCTTTTGG+CGG - chr3_1:7992888-7992907 Msa0347090:intron 35.0%
TACTAATCACACTTCTTGAC+AGG + chr3_1:7992947-7992966 None:intergenic 35.0%
!! ACAAGCAAAACTTTTGACTC+AGG + chr3_1:7993156-7993175 None:intergenic 35.0%
! AGCAAAGAAGGAACCTTTTG+AGG + chr3_1:7987516-7987535 None:intergenic 40.0%
!! TCATCTGGGTCGTTTTCTTT+TGG - chr3_1:7987572-7987591 Msa0347090:CDS 40.0%
! TGTGATTTTGTGACTGATGG+TGG - chr3_1:7988064-7988083 Msa0347090:CDS 40.0%
CCACCTACTGTGATATGAAT+CGG - chr3_1:7988285-7988304 Msa0347090:intron 40.0%
GTAACATTAATCACAGGTCC+AGG + chr3_1:7988426-7988445 None:intergenic 40.0%
ACATACTATGTCACATTCGG+TGG - chr3_1:7988693-7988712 Msa0347090:intron 40.0%
! AAAAATGTTTGTTGCAGGCC+TGG - chr3_1:7988780-7988799 Msa0347090:CDS 40.0%
TACGTCCAATTCCATTTCGA+AGG + chr3_1:7988864-7988883 None:intergenic 40.0%
! GACGTATCAGTTTCAAGTGA+AGG - chr3_1:7988878-7988897 Msa0347090:intron 40.0%
! GCTCTTTGGAAATTAGTGGA+AGG + chr3_1:7988930-7988949 None:intergenic 40.0%
AATTTCCAAAGAGCTTCTGG+TGG - chr3_1:7988936-7988955 Msa0347090:intron 40.0%
!! GCTCTAAGATCAACACTTGA+CGG - chr3_1:7989173-7989192 Msa0347090:CDS 40.0%
AAAGACCTTGGAATACCAGA+TGG - chr3_1:7989200-7989219 Msa0347090:CDS 40.0%
CCATTGATAAGAACACCATC+TGG + chr3_1:7989218-7989237 None:intergenic 40.0%
CCAGATGGTGTTCTTATCAA+TGG - chr3_1:7989215-7989234 Msa0347090:CDS 40.0%
TGGTGTTCTTATCAATGGGA+AGG - chr3_1:7989220-7989239 Msa0347090:CDS 40.0%
GGTGTTCTTATCAATGGGAA+GGG - chr3_1:7989221-7989240 Msa0347090:CDS 40.0%
TGTACACTGTATGTAGGCAT+TGG + chr3_1:7989425-7989444 None:intergenic 40.0%
TGATGTTCTCACAGAAAGCA+CGG + chr3_1:7989596-7989615 None:intergenic 40.0%
GGAACAGTTTGAATTCTGAC+TGG - chr3_1:7989786-7989805 Msa0347090:intron 40.0%
CCACATTATGGACACGAATT+CGG + chr3_1:7989843-7989862 None:intergenic 40.0%
CGAATTCGTGTCCATAATGT+GGG - chr3_1:7989841-7989860 Msa0347090:intron 40.0%
CTATTGCTGGTAGAAACTGA+AGG - chr3_1:7989904-7989923 Msa0347090:intron 40.0%
! GTTGGTGTAATTTGCCTGAT+CGG + chr3_1:7989938-7989957 None:intergenic 40.0%
GCCAGCATGAATATCAAAGT+TGG + chr3_1:7989956-7989975 None:intergenic 40.0%
ACTATATTGTTGCAAGTGCG+AGG - chr3_1:7990025-7990044 Msa0347090:intron 40.0%
TCATTATGGCAGAAGGTTAC+AGG - chr3_1:7990060-7990079 Msa0347090:intron 40.0%
!! TAAAAATCATCTGGTGGTGG+TGG + chr3_1:7990138-7990157 None:intergenic 40.0%
ATTGTTTGCGAATGTCAGTG+AGG - chr3_1:7990369-7990388 Msa0347090:CDS 40.0%
! TATATCGGAGCGCTATAGTA+TGG - chr3_1:7990517-7990536 Msa0347090:CDS 40.0%
CCTATACCTACTTTGCGTTA+CGG - chr3_1:7990609-7990628 Msa0347090:CDS 40.0%
ATGAAGTTGTCAACCTCACA+AGG + chr3_1:7990716-7990735 None:intergenic 40.0%
TTAGTGTTATATCGGCGCTA+GGG + chr3_1:7990860-7990879 None:intergenic 40.0%
AGTTAAGTGACAACTCACGT+TGG - chr3_1:7990932-7990951 Msa0347090:intron 40.0%
! CTAATGACTCGGAATGATCA+AGG - chr3_1:7991025-7991044 Msa0347090:intron 40.0%
! TGATGTTTTCCCTTATCAGC+TGG - chr3_1:7991096-7991115 Msa0347090:intron 40.0%
GCATATTAGCCAGCTGATAA+GGG + chr3_1:7991108-7991127 None:intergenic 40.0%
TGCATATTAGCCAGCTGATA+AGG + chr3_1:7991109-7991128 None:intergenic 40.0%
CTTGTTAAAGGTTACAGCAC+CGG - chr3_1:7991238-7991257 Msa0347090:CDS 40.0%
ACAACTCGAGCTGCAATTAA+CGG - chr3_1:7991275-7991294 Msa0347090:intron 40.0%
TAAAACCTGACGTTCCGTTT+CGG - chr3_1:7991309-7991328 Msa0347090:intron 40.0%
ATCACTGGTGTTCTGTTCAT+CGG + chr3_1:7991389-7991408 None:intergenic 40.0%
!! GGTACTCCTTTTTCGTTGTT+GGG - chr3_1:7991501-7991520 Msa0347090:intron 40.0%
!! CTTGGATTTAGGATGGACTA+TGG - chr3_1:7991601-7991620 Msa0347090:intron 40.0%
CATGTTAGCAAGCTTATGCA+TGG - chr3_1:7991827-7991846 Msa0347090:intron 40.0%
AATTAGATGGCACTACTGAG+GGG - chr3_1:7991897-7991916 Msa0347090:intron 40.0%
GTTGTTGTCATGTGACTGTA+AGG - chr3_1:7991942-7991961 Msa0347090:intron 40.0%
ACTGCCTCTTGTGTAAAAAC+AGG - chr3_1:7991986-7992005 Msa0347090:CDS 40.0%
CTGCCTCTTGTGTAAAAACA+GGG - chr3_1:7991987-7992006 Msa0347090:CDS 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_1:7992018-7992037 Msa0347090:CDS 40.0%
AATGATTGATTGAGTCCCCT+AGG + chr3_1:7992229-7992248 None:intergenic 40.0%
CTCTAGACAATGTTGGATCA+TGG - chr3_1:7992306-7992325 Msa0347090:intron 40.0%
TGAGAGCAGAAAATTTGGAC+AGG - chr3_1:7992333-7992352 Msa0347090:intron 40.0%
ATTGTCAATCCTGAAGAAGC+CGG - chr3_1:7992386-7992405 Msa0347090:intron 40.0%
GGGTACAAAAACACTGTCAA+TGG + chr3_1:7992491-7992510 None:intergenic 40.0%
! GCAGATTCTACTTTGAGAAG+TGG - chr3_1:7992824-7992843 Msa0347090:intron 40.0%
! CTTCCTTTTCACATTGCTCA+TGG - chr3_1:7992847-7992866 Msa0347090:intron 40.0%
TTCCCATGAGCAATGTGAAA+AGG + chr3_1:7992853-7992872 None:intergenic 40.0%
!! TCCTCTTGGTGTTCCTCAAA+AGG - chr3_1:7987500-7987519 Msa0347090:three_prime_UTR 45.0%
!! ACCTTTTGAGGAACACCAAG+AGG + chr3_1:7987504-7987523 None:intergenic 45.0%
!! TTTGTGACTGATGGTGGACT+TGG - chr3_1:7988070-7988089 Msa0347090:CDS 45.0%
TGGCCCTTGTGTGATTTCAA+TGG - chr3_1:7988090-7988109 Msa0347090:CDS 45.0%
CCGATTCATATCACAGTAGG+TGG + chr3_1:7988288-7988307 None:intergenic 45.0%
ATGTTTACTGCGGTGTCCTT+TGG - chr3_1:7988600-7988619 Msa0347090:intron 45.0%
CAAATCCACCAGAAGCTCTT+TGG + chr3_1:7988944-7988963 None:intergenic 45.0%
!! CAAAGAGCTTCTGGTGGATT+TGG - chr3_1:7988942-7988961 Msa0347090:intron 45.0%
CTAAGATCAACACTTGACGG+TGG - chr3_1:7989176-7989195 Msa0347090:CDS 45.0%
GAACACCATCTGGTATTCCA+AGG + chr3_1:7989208-7989227 None:intergenic 45.0%
GTGTGGTGTACACTGTATGT+AGG + chr3_1:7989431-7989450 None:intergenic 45.0%
CCGAATTCGTGTCCATAATG+TGG - chr3_1:7989840-7989859 Msa0347090:intron 45.0%
!! TGAAGGGTATTACACCGATC+AGG - chr3_1:7989921-7989940 Msa0347090:intron 45.0%
AGAGCAGAAAAGAGTAGGAC+TGG + chr3_1:7989978-7989997 None:intergenic 45.0%
AGTAGTCTGTACTTGCGTTC+TGG + chr3_1:7990008-7990027 None:intergenic 45.0%
CACTACTCAAATTCCAAGGG+TGG - chr3_1:7990096-7990115 Msa0347090:intron 45.0%
GCTATAGTATGGCTGCATAG+CGG - chr3_1:7990528-7990547 Msa0347090:CDS 45.0%
CCGTAACGCAAAGTAGGTAT+AGG + chr3_1:7990612-7990631 None:intergenic 45.0%
GTTAGTGTTATATCGGCGCT+AGG + chr3_1:7990861-7990880 None:intergenic 45.0%
! TGACAACTCACGTTGGTTGA+TGG - chr3_1:7990939-7990958 Msa0347090:intron 45.0%
AGGCTAAACACATCTGCAAG+TGG - chr3_1:7991155-7991174 Msa0347090:CDS 45.0%
TTGTTGTCAGCAAGCCGAAA+CGG + chr3_1:7991326-7991345 None:intergenic 45.0%
GCTGACAACAATCAGCTAAG+AGG - chr3_1:7991335-7991354 Msa0347090:intron 45.0%
!! GGGTACTCCTTTTTCGTTGT+TGG - chr3_1:7991500-7991519 Msa0347090:intron 45.0%
!! TTAGGATGGACTATGGCGAT+TGG - chr3_1:7991608-7991627 Msa0347090:intron 45.0%
AATATCTCGCAGCACAACTC+AGG - chr3_1:7991669-7991688 Msa0347090:intron 45.0%
GTTAGCAAGCTTATGCATGG+AGG - chr3_1:7991830-7991849 Msa0347090:intron 45.0%
GTCATGTGACTGTAAGGTCA+CGG - chr3_1:7991948-7991967 Msa0347090:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG - chr3_1:7991949-7991968 Msa0347090:intron 45.0%
TTACACAAGAGGCAGTTTCC+AGG + chr3_1:7991982-7992001 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr3_1:7992014-7992033 Msa0347090:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_1:7992017-7992036 Msa0347090:CDS 45.0%
CAACATTGTCTAGAGACACC+AGG + chr3_1:7992301-7992320 None:intergenic 45.0%
CTGGTGTCTCTAGACAATGT+TGG - chr3_1:7992299-7992318 Msa0347090:intron 45.0%
GAGCAGAAAATTTGGACAGG+TGG - chr3_1:7992336-7992355 Msa0347090:intron 45.0%
AATTTGGACAGGTGGTACCT+AGG - chr3_1:7992344-7992363 Msa0347090:intron 45.0%
!!! GATTATAAATTAAATTTTAA+AGG - chr3_1:7988249-7988268 Msa0347090:intron 5.0%
!! AATATATAATAAAATGAAAT+AGG + chr3_1:7990309-7990328 None:intergenic 5.0%
AACACCAAGAGGAGAAGCAG+TGG + chr3_1:7987493-7987512 None:intergenic 50.0%
TTACGCCGCATTTGAACACC+AGG + chr3_1:7988801-7988820 None:intergenic 50.0%
TTCAAATGCGGCGTAACTCG+TGG - chr3_1:7988805-7988824 Msa0347090:CDS 50.0%
CTTGACGGTGGAAAAGACCT+TGG - chr3_1:7989188-7989207 Msa0347090:CDS 50.0%
GGTGGAGAGCAGAAAAGAGT+AGG + chr3_1:7989983-7990002 None:intergenic 50.0%
GTCTGTACTTGCGTTCTGGT+CGG + chr3_1:7990004-7990023 None:intergenic 50.0%
! AATTCCAAGGGTGGAGCATC+TGG - chr3_1:7990105-7990124 Msa0347090:intron 50.0%
CTAACCCTCAAGGGTCCTTT+CGG - chr3_1:7991186-7991205 Msa0347090:CDS 50.0%
CTTGATTGAGCCGTACCGAA+AGG + chr3_1:7991204-7991223 None:intergenic 50.0%
! GTTAAAGGTTACAGCACCGG+TGG - chr3_1:7991241-7991260 Msa0347090:CDS 50.0%
!! GTTCTGTTCATCGGCTTGCT+GGG + chr3_1:7991380-7991399 None:intergenic 50.0%
!! TGTTCTGTTCATCGGCTTGC+TGG + chr3_1:7991381-7991400 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr3_1:7991926-7991945 None:intergenic 50.0%
TCCACCACTGCTTCTCCTCT+TGG - chr3_1:7987486-7987505 Msa0347090:three_prime_UTR 55.0%
ACCAAGAGGAGAAGCAGTGG+TGG + chr3_1:7987490-7987509 None:intergenic 55.0%
GCAGGCCTGGTGTTCAAATG+CGG - chr3_1:7988793-7988812 Msa0347090:CDS 55.0%
TCGTGGCAGGATGGAGTTCT+TGG - chr3_1:7988822-7988841 Msa0347090:CDS 55.0%
! ATTCCTTTTGCGCAGCCCGA+CGG - chr3_1:7988999-7989018 Msa0347090:CDS 55.0%
TGTACTTGCGTTCTGGTCGG+TGG + chr3_1:7990001-7990020 None:intergenic 55.0%
GAGCTCGTCCTAACCCTCAA+GGG - chr3_1:7991177-7991196 Msa0347090:CDS 55.0%
CGAAAGGACCCTTGAGGGTT+AGG + chr3_1:7991188-7991207 None:intergenic 55.0%
CGTACCGAAAGGACCCTTGA+GGG + chr3_1:7991193-7991212 None:intergenic 55.0%
CCTCAAGGGTCCTTTCGGTA+CGG - chr3_1:7991191-7991210 Msa0347090:CDS 55.0%
GCACTACTGAGGGGTAACCT+TGG - chr3_1:7991906-7991925 Msa0347090:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr3_1:7991961-7991980 Msa0347090:CDS 55.0%
AGGATTGCTGTCCATGCTCC+AGG + chr3_1:7992281-7992300 None:intergenic 55.0%
TGGAGCATGGACAGCAATCC+TGG - chr3_1:7992280-7992299 Msa0347090:intron 55.0%
AATGCGGCGTAACTCGTGGC+AGG - chr3_1:7988809-7988828 Msa0347090:CDS 60.0%
AGGACCAGATGCTCCACCCT+TGG + chr3_1:7990112-7990131 None:intergenic 60.0%
!! TCATCTGGTGGTGGTGGCAG+AGG + chr3_1:7990132-7990151 None:intergenic 60.0%
GGAGCTCGTCCTAACCCTCA+AGG - chr3_1:7991176-7991195 Msa0347090:CDS 60.0%
CCGTACCGAAAGGACCCTTG+AGG + chr3_1:7991194-7991213 None:intergenic 60.0%
!! ACAGCACCGGTGGCGATCAA+CGG - chr3_1:7991251-7991270 Msa0347090:CDS 60.0%
! GTTGTGCCGTTGATCGCCAC+CGG + chr3_1:7991260-7991279 None:intergenic 60.0%
GCAAGCCGAAACGGAACGTC+AGG + chr3_1:7991317-7991336 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr3_1:7991915-7991934 Msa0347090:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_1:7992030-7992049 Msa0347090:CDS 60.0%
CTGAAGCTCCCGCATACGCA+GGG + chr3_1:7992057-7992076 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG + chr3_1:7992058-7992077 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr3_1:7992062-7992081 Msa0347090:intron 60.0%
!! TCTGTGTCGCCGGCTTCTTC+AGG + chr3_1:7992398-7992417 None:intergenic 60.0%
TGCACCAGTCTCTGTGTCGC+CGG + chr3_1:7992408-7992427 None:intergenic 60.0%
CGGCGTAACTCGTGGCAGGA+TGG - chr3_1:7988813-7988832 Msa0347090:CDS 65.0%
TCACCGTCGGGCTGCGCAAA+AGG + chr3_1:7989005-7989024 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_1:7992032-7992051 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr3_1:7992045-7992064 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr3_1:7992046-7992065 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr3_1:7992045-7992064 Msa0347090:CDS 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr3_1:7992046-7992065 Msa0347090:CDS 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr3_1:7992063-7992082 Msa0347090:intron 65.0%
GAAGCCGGCGACACAGAGAC+TGG - chr3_1:7992401-7992420 Msa0347090:intron 65.0%
CGCATACGCAGGGTCCGGGA+AGG + chr3_1:7992047-7992066 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr3_1:7992051-7992070 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr3_1:7992052-7992071 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 7987269 7993197 7987269 ID=Msa0347090;Name=Msa0347090
chr3_1 mRNA 7987269 7993197 7987269 ID=Msa0347090-mRNA-1;Parent=Msa0347090;Name=Msa0347090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=87|0.88|0.9|1|0.88|0.8|10|299|528
chr3_1 exon 7987269 7987667 7987269 ID=Msa0347090-mRNA-1:exon:2325;Parent=Msa0347090-mRNA-1
chr3_1 exon 7987995 7988194 7987995 ID=Msa0347090-mRNA-1:exon:2324;Parent=Msa0347090-mRNA-1
chr3_1 exon 7988776 7988854 7988776 ID=Msa0347090-mRNA-1:exon:2323;Parent=Msa0347090-mRNA-1
chr3_1 exon 7988944 7989309 7988944 ID=Msa0347090-mRNA-1:exon:2322;Parent=Msa0347090-mRNA-1
chr3_1 exon 7990270 7990636 7990270 ID=Msa0347090-mRNA-1:exon:2321;Parent=Msa0347090-mRNA-1
chr3_1 exon 7991155 7991293 7991155 ID=Msa0347090-mRNA-1:exon:2320;Parent=Msa0347090-mRNA-1
chr3_1 exon 7991399 7991480 7991399 ID=Msa0347090-mRNA-1:exon:2319;Parent=Msa0347090-mRNA-1
chr3_1 exon 7991958 7992067 7991958 ID=Msa0347090-mRNA-1:exon:2318;Parent=Msa0347090-mRNA-1
chr3_1 exon 7992945 7993137 7992945 ID=Msa0347090-mRNA-1:exon:2317;Parent=Msa0347090-mRNA-1
chr3_1 exon 7993160 7993197 7993160 ID=Msa0347090-mRNA-1:exon:2316;Parent=Msa0347090-mRNA-1
chr3_1 five_prime_UTR 7993160 7993197 7993160 ID=Msa0347090-mRNA-1:five_prime_utr;Parent=Msa0347090-mRNA-1
chr3_1 five_prime_UTR 7993089 7993137 7993089 ID=Msa0347090-mRNA-1:five_prime_utr;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7992945 7993088 7992945 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7991958 7992067 7991958 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7991399 7991480 7991399 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7991155 7991293 7991155 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7990270 7990636 7990270 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7988944 7989309 7988944 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7988776 7988854 7988776 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7987995 7988194 7987995 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 CDS 7987568 7987667 7987568 ID=Msa0347090-mRNA-1:cds;Parent=Msa0347090-mRNA-1
chr3_1 three_prime_UTR 7987269 7987567 7987269 ID=Msa0347090-mRNA-1:three_prime_utr;Parent=Msa0347090-mRNA-1
Gene Sequence

>Msa0347090

ATGGGTCTCTTCAGATTTTCTCTCTGTTTTTTCATCCTCAACATTGCTCTGTTTTCAACTCTCTGTTTTTCTGGTGATCCAACTGTTTACACAGAACTTCACGTCACTTCCACCACTGCTTCTCCTCTTGGTGTTCCTCAAAAGGTTATAGCTATAAATGGGAAATTTCCTGGACCTGTGATTAATGTTACTACAAATAACCATGTGGTAGTGAATGTGTATAATCAGCTGGATGAAGATCTTCTCATAACATGGGAGATTATACAGATTCCTTTTGCGCAGCCCGACGGTGAAATTTTCATTATGATTGGTGATTGGTATACTCAAGACTACACGGCTCTAAGATCAACACTTGACGGTGGAAAAGACCTTGGAATACCAGATGGTGTTCTTATCAATGGGAAGGGACCTTATCAGTACAATAATACTCTTGTACCTAATGGGATAGATCATGAAACAATTACTGTTGATCCAGGCAAGACTTACCGAATTCGTGTCCATAATGTGGGAATTTCAACTACCTTAAACTTTCGAATTCAAAATCATAATCTATTGCTGGTAGAAACTGAAGGGTATTACACCGATCAGGCAAATTACACCAACTTTGATATTCATGCTGGCCAGTCCTACTCTTTTCTGCTCTCCACCGACCAGAACGCAAGTACAGACTACTATATTGTTGCAAGTGCGAGGTTTGTGAATGAATCATTATGGCAGAAGGTTACAGGTGTTGCTGTTTTACACTACTCAAATTCCAAGGGTGGAGCATCTGGTCCTCTGCCACCACCACCAGATGATTTTTATAACAAGGGCGCATCAATGAACCAAGCAAAAAGTATCAGGCTAAACACATCTGCAAGTGGAGCTCGTCCTAACCCTCAAGGGTCCTTTCGGTACGGCTCAATCAAGATTACTGATTTTTACTTGTTAAAGGTTACAGCACCGGTGGCGATCAACGGCACAACTCGAGCTGCAATTAACGGAATCTCATTTCTAAAACCTGACGTTCCGTTTCGGCTTGCTGACAACAATCAGCTAAGAGGAATTTATAAGCTTGATTTTCCCAGCAAGCCGATGAACAGAACACCAGTGATTGATAGATCAATCATCAACGGTACATATAAAGGGTTCATTGAGATTGTATTGCAAAACAATGACTCCTCTGTTCAAAACTTTCATCTGGATGGGTACTCCTTTTTCGTTGTTGGGATGGACTATGGCGATTGGTCCGAAAATTCAAGAAACACTTACAATAAGTGGGATGCAATATCTCGCAGCACAACTCAGGTTTTTCCTGGAGCATGGACAGCAATCCTGGTGTCTCTAGACAATGTTGGATCATGGAATCTGAGAGCAGAAAATTTGGACAGGTGGTACCTAGGTCAAGAAACTTATCTGAGGATTGTCAATCCTGAAGAAGCCGGCGACACAGAGACTGGTGCACCAGAAAATGTTCTATATTGCGGCCCTCTCCAATACAAACAAAAAAAGCAGACACATTCTTCATCTTCTGCAGATTCTACTTTGAGAAGTGGCTTCCTTTTCACATTGCTCATGGGAATTCTTGTGATTTTCACATCTAGTTAA
Protein sequence

>Msa0347090

MGLFRFSLCFFILNIALFSTLCFSGDPTVYTELHVTSTTASPLGVPQKVIAINGKFPGPVINVTTNNHVVVNVYNQLDEDLLITWEIIQIPFAQPDGEIFIMIGDWYTQDYTALRSTLDGGKDLGIPDGVLINGKGPYQYNNTLVPNGIDHETITVDPGKTYRIRVHNVGISTTLNFRIQNHNLLLVETEGYYTDQANYTNFDIHAGQSYSFLLSTDQNASTDYYIVASARFVNESLWQKVTGVAVLHYSNSKGGASGPLPPPPDDFYNKGASMNQAKSIRLNTSASGARPNPQGSFRYGSIKITDFYLLKVTAPVAINGTTRAAINGISFLKPDVPFRLADNNQLRGIYKLDFPSKPMNRTPVIDRSIINGTYKGFIEIVLQNNDSSVQNFHLDGYSFFVVGMDYGDWSENSRNTYNKWDAISRSTTQVFPGAWTAILVSLDNVGSWNLRAENLDRWYLGQETYLRIVNPEEAGDTETGAPENVLYCGPLQYKQKKQTHSSSSADSTLRSGFLFTLLMGILVIFTSS*