Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347310 | XP_003598248.1 | 81.595 | 489 | 10 | 4 | 159 | 567 | 1 | 489 | 0.0 | 798 |
| Msa0347310 | XP_003598248.1 | 91.579 | 95 | 8 | 0 | 51 | 145 | 1 | 95 | 6.01e-49 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347310 | sp|B0XN12|EXGA_ASPFC | 23.121 | 346 | 156 | 14 | 324 | 563 | 59 | 400 | 2.26e-12 | 72.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347310 | G7IYK2 | 81.595 | 489 | 10 | 4 | 159 | 567 | 1 | 489 | 0.0 | 798 |
| Msa0347310 | G7IYK2 | 91.579 | 95 | 8 | 0 | 51 | 145 | 1 | 95 | 2.87e-49 | 187 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0347310 | Msa0489360 | 0.802523 | 5.389158e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0347310 | MtrunA17_Chr3g0079431 | 81.595 | 489 | 10 | 4 | 159 | 567 | 1 | 489 | 0.0 | 798 |
| Msa0347310 | MtrunA17_Chr3g0079431 | 91.579 | 95 | 8 | 0 | 51 | 145 | 1 | 95 | 5.52e-53 | 187 |
| Msa0347310 | MtrunA17_Chr3g0079441 | 74.338 | 491 | 44 | 5 | 159 | 567 | 1 | 491 | 0.0 | 709 |
| Msa0347310 | MtrunA17_Chr3g0079441 | 95.789 | 95 | 4 | 0 | 51 | 145 | 1 | 95 | 7.31e-56 | 196 |
| Msa0347310 | MtrunA17_Chr3g0079461 | 66.265 | 498 | 78 | 9 | 159 | 567 | 1 | 497 | 0.0 | 608 |
| Msa0347310 | MtrunA17_Chr3g0079461 | 75.510 | 98 | 20 | 1 | 51 | 144 | 1 | 98 | 3.47e-33 | 132 |
| Msa0347310 | MtrunA17_Chr3g0079451 | 65.598 | 468 | 77 | 6 | 184 | 567 | 6 | 473 | 0.0 | 593 |
| Msa0347310 | MtrunA17_Chr8g0382641 | 50.199 | 502 | 151 | 10 | 164 | 567 | 6 | 506 | 2.75e-165 | 479 |
| Msa0347310 | MtrunA17_Chr8g0382641 | 57.143 | 98 | 34 | 1 | 56 | 145 | 6 | 103 | 1.94e-27 | 115 |
| Msa0347310 | MtrunA17_Chr5g0425401 | 44.625 | 493 | 181 | 10 | 166 | 567 | 14 | 505 | 3.09e-139 | 413 |
| Msa0347310 | MtrunA17_Chr5g0425401 | 56.044 | 91 | 37 | 1 | 58 | 145 | 14 | 104 | 1.58e-23 | 104 |
| Msa0347310 | MtrunA17_Chr3g0123661 | 39.078 | 499 | 202 | 13 | 168 | 567 | 10 | 505 | 3.24e-106 | 329 |
| Msa0347310 | MtrunA17_Chr5g0425361 | 52.708 | 277 | 109 | 5 | 155 | 410 | 2 | 277 | 1.79e-92 | 293 |
| Msa0347310 | MtrunA17_Chr5g0425361 | 44.186 | 172 | 77 | 3 | 415 | 567 | 336 | 507 | 7.86e-42 | 157 |
| Msa0347310 | MtrunA17_Chr5g0425361 | 49.524 | 105 | 47 | 1 | 47 | 145 | 2 | 106 | 4.03e-25 | 108 |
| Msa0347310 | MtrunA17_Chr5g0425351 | 45.143 | 175 | 71 | 4 | 355 | 507 | 19 | 190 | 2.09e-42 | 151 |
| Msa0347310 | MtrunA17_Chr5g0425291 | 55.405 | 74 | 31 | 2 | 353 | 426 | 19 | 90 | 1.63e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 129 sgRNAs with CRISPR-Local
Find 1044 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATGATCACATAAGTATT+TGG | 0.123305 | 3_1:+8277371 | None:intergenic |
| CTTCTGGTTGGGAAACATTT+AGG | 0.131349 | 3_1:-8289383 | Msa0347310:CDS |
| CTATTATTTGAGCTTCTTAT+TGG | 0.155909 | 3_1:-8290768 | Msa0347310:CDS |
| CAACATTTGGATGGGCTTAT+TGG | 0.170600 | 3_1:-8276949 | Msa0347310:CDS |
| CTATTATTTGAGGTTCTTAT+TGG | 0.175081 | 3_1:-8289185 | Msa0347310:CDS |
| ACATATCTTTGCTCTGAAAA+TGG | 0.179498 | 3_1:-8289441 | Msa0347310:CDS |
| GCTTACAAAGCTGTGAATTT+AGG | 0.195268 | 3_1:-8289127 | Msa0347310:CDS |
| GCTTACAAAGCTGTGAATTT+AGG | 0.195268 | 3_1:-8290710 | Msa0347310:CDS |
| AAGCATCAAATGGTCTATTT+TGG | 0.202544 | 3_1:-8287761 | Msa0347310:CDS |
| CAGATTATCAAGGCACAAAT+TGG | 0.214773 | 3_1:-8287051 | Msa0347310:CDS |
| CTTCTGGTTGGGAAACATTC+AGG | 0.224679 | 3_1:-8288057 | Msa0347310:CDS |
| TTCAGATTTATGTCACAAAA+TGG | 0.249547 | 3_1:-8286803 | Msa0347310:CDS |
| ATGAAACATTTCAGATTATA+AGG | 0.262921 | 3_1:-8287815 | Msa0347310:CDS |
| GCCAACCGTGGTTCTGCTTC+TGG | 0.263236 | 3_1:-8288073 | Msa0347310:CDS |
| GTTTAGGTGGGTTTGGATCT+TGG | 0.275341 | 3_1:+8286741 | None:intergenic |
| TTTAGGTGGGTTTGGATCTT+GGG | 0.277322 | 3_1:+8286742 | None:intergenic |
| TTCTGGTTGGGAAACATTTA+GGG | 0.295890 | 3_1:-8289382 | Msa0347310:intron |
| ATAGCCTGAAGAACTATTAC+AGG | 0.305528 | 3_1:-8277424 | Msa0347310:CDS |
| TATATAGTGCCCTTGGTGAT+AGG | 0.310125 | 3_1:-8290827 | Msa0347310:CDS |
| CTTCCCTGTAATAGTTCTTC+AGG | 0.319286 | 3_1:+8277420 | None:intergenic |
| TTATAATCTGAAATGTTTCA+TGG | 0.319759 | 3_1:+8287817 | None:intergenic |
| TTTGTGCTTGGATATATCTT+TGG | 0.323884 | 3_1:+8276990 | None:intergenic |
| AACATTTGGATGGGCTTATT+GGG | 0.329301 | 3_1:-8276948 | Msa0347310:CDS |
| ACATGATCACATAAGTATTT+GGG | 0.338303 | 3_1:+8277372 | None:intergenic |
| ACAAAAGGTTTAGGTGGGTT+TGG | 0.353332 | 3_1:+8286734 | None:intergenic |
| AAGCTGTGAATTTAGGAAAC+TGG | 0.354101 | 3_1:-8289120 | Msa0347310:CDS |
| AAGCTGTGAATTTAGGAAAC+TGG | 0.354101 | 3_1:-8290703 | Msa0347310:CDS |
| AATTTGAATTTGCTACAATT+TGG | 0.358353 | 3_1:+8287850 | None:intergenic |
| CCGTGGTTCTGCTTCTGGTT+GGG | 0.360673 | 3_1:-8288068 | Msa0347310:CDS |
| CATATCTTTGCTCTGAAAAT+GGG | 0.369522 | 3_1:-8289440 | Msa0347310:CDS |
| GCCGACCGTAGTTCACCTTC+TGG | 0.397256 | 3_1:-8289399 | Msa0347310:CDS |
| GTTAAACACTCTAAAATTGA+AGG | 0.404716 | 3_1:+8287902 | None:intergenic |
| GTGTATTCTCATGCAACATT+TGG | 0.419146 | 3_1:-8276962 | Msa0347310:CDS |
| TGGCTCATTTGCAGCTTTGG+AGG | 0.420703 | 3_1:-8287938 | Msa0347310:intron |
| CCGTAGTTCACCTTCTGGTT+GGG | 0.427471 | 3_1:-8289394 | Msa0347310:CDS |
| ATGGAGCCTTCTCGCTTTGA+CGG | 0.434403 | 3_1:-8290662 | Msa0347310:CDS |
| TACCAACTTACTAATGGTTA+TGG | 0.434769 | 3_1:-8286971 | Msa0347310:CDS |
| ATGGAACCTTCTCGCTTTGA+CGG | 0.442568 | 3_1:-8289079 | Msa0347310:CDS |
| ACATATCTTTCCGCTGAAGA+TGG | 0.444863 | 3_1:-8288115 | Msa0347310:CDS |
| TTTCAGAGCAAAGATATGTC+TGG | 0.452562 | 3_1:+8289445 | None:intergenic |
| GCATTACTACAATATGTATT+CGG | 0.453344 | 3_1:-8277276 | Msa0347310:CDS |
| ATATAGTGCCCTTGGTGATA+GGG | 0.461091 | 3_1:-8290826 | Msa0347310:CDS |
| ACCGTGGTTCTGCTTCTGGT+TGG | 0.462630 | 3_1:-8288069 | Msa0347310:CDS |
| ACCGTAGTTCACCTTCTGGT+TGG | 0.463053 | 3_1:-8289395 | Msa0347310:CDS |
| AACAAGAAATTTGTGGGGCA+AGG | 0.463143 | 3_1:-8287882 | Msa0347310:CDS |
| TTCTATTGTTGGTAGGGGAA+TGG | 0.463656 | 3_1:-8277054 | Msa0347310:intron |
| GGCTCATTTGCAGCTTTGGA+GGG | 0.466108 | 3_1:-8287937 | Msa0347310:intron |
| ACATAAGAAATGACAGAGCC+TGG | 0.466178 | 3_1:-8277214 | Msa0347310:CDS |
| TTCTGGTTGGGAAACATTCA+GGG | 0.470013 | 3_1:-8288056 | Msa0347310:intron |
| CATATCTTTCCGCTGAAGAT+GGG | 0.471301 | 3_1:-8288114 | Msa0347310:CDS |
| AAGATATATCCAAGCACAAA+TGG | 0.473949 | 3_1:-8276987 | Msa0347310:CDS |
| TGTTTGCTTTGCAGGACCAT+TGG | 0.479255 | 3_1:-8286850 | Msa0347310:intron |
| TGGGCTATCCACCATCCAAC+AGG | 0.479749 | 3_1:+8286761 | None:intergenic |
| GTGTTTAACAAGAAATTTGT+GGG | 0.481041 | 3_1:-8287888 | Msa0347310:CDS |
| CTCAAGTGGTTGATCGAGAA+TGG | 0.484613 | 3_1:-8276896 | Msa0347310:CDS |
| CTTCTTCTCTCATTTGTCAA+AGG | 0.486302 | 3_1:-8277323 | Msa0347310:CDS |
| AATATCGAAACTATTATTTG+AGG | 0.487500 | 3_1:-8289195 | Msa0347310:CDS |
| TTCTCATGCAACATTTGGAT+GGG | 0.487793 | 3_1:-8276957 | Msa0347310:CDS |
| ATTCGAATCAAAGCATCAAA+TGG | 0.491455 | 3_1:-8287771 | Msa0347310:CDS |
| TGCCATAACCATTAGTAAGT+TGG | 0.494045 | 3_1:+8286969 | None:intergenic |
| AATTGTCAACAAAGATCTCT+TGG | 0.496005 | 3_1:-8289056 | Msa0347310:intron |
| AATTGTCAACAAAGATCTCT+TGG | 0.496005 | 3_1:-8290639 | Msa0347310:intron |
| ATGTATTCGGATAAATTCAA+TGG | 0.504587 | 3_1:-8277263 | Msa0347310:CDS |
| CACTTGACAATGCTTTCACA+TGG | 0.508127 | 3_1:-8286694 | Msa0347310:CDS |
| GACAGAGCCTGGGATCTTAG+TGG | 0.512889 | 3_1:-8277203 | Msa0347310:intron |
| AATACACATCCATTTGTGCT+TGG | 0.514294 | 3_1:+8276978 | None:intergenic |
| GGAGAGTACCAACTTACTAA+TGG | 0.515314 | 3_1:-8286977 | Msa0347310:CDS |
| ATTCTCATGCAACATTTGGA+TGG | 0.518902 | 3_1:-8276958 | Msa0347310:CDS |
| ACTGGCTTGTTGCTGAAGGA+TGG | 0.521485 | 3_1:-8289102 | Msa0347310:CDS |
| ACTGGCTTGTTGCTGAAGGA+TGG | 0.521485 | 3_1:-8290685 | Msa0347310:CDS |
| ACAATTGTAAACACATTACA+AGG | 0.521868 | 3_1:-8286998 | Msa0347310:CDS |
| TAGGGGAATGGACTGCTGAA+TGG | 0.522605 | 3_1:-8277042 | Msa0347310:CDS |
| CCTTGGTGATAGGGGCACTC+AGG | 0.525075 | 3_1:-8290817 | Msa0347310:CDS |
| AGTGTTTAACAAGAAATTTG+TGG | 0.525940 | 3_1:-8287889 | Msa0347310:CDS |
| TTTCTTACTCGCATAACTTG+AGG | 0.526026 | 3_1:+8286938 | None:intergenic |
| AGATTATCAAGGCACAAATT+GGG | 0.526125 | 3_1:-8287050 | Msa0347310:CDS |
| TGTGATCATGTCAAATCCAT+TGG | 0.526301 | 3_1:-8277360 | Msa0347310:CDS |
| GAGGCTATATATAGTGCCCT+TGG | 0.527224 | 3_1:-8290834 | Msa0347310:CDS |
| GCTTGTTGCTGAAGGATGGA+TGG | 0.536766 | 3_1:-8290681 | Msa0347310:CDS |
| AAATTTGTGGGGCAAGGAGA+AGG | 0.537779 | 3_1:-8287876 | Msa0347310:CDS |
| CCCCAACAAAAGGTTTAGGT+GGG | 0.545640 | 3_1:+8286729 | None:intergenic |
| GCTTGTTGCTGAAGGATGGA+TGG | 0.547369 | 3_1:-8289098 | Msa0347310:CDS |
| TCCTGCGTTGGCTATCACCA+AGG | 0.558515 | 3_1:+8289233 | None:intergenic |
| ACAAATGTCAGTATAACCAT+TGG | 0.560150 | 3_1:-8276922 | Msa0347310:CDS |
| CAGTTATGTATGAATTCCAA+TGG | 0.561323 | 3_1:+8286834 | None:intergenic |
| GAGAAGAAGTTTAGAATCTG+TGG | 0.563821 | 3_1:+8277337 | None:intergenic |
| TATCTTTGGTAGTCTTGCAT+AGG | 0.565810 | 3_1:+8277004 | None:intergenic |
| ATATCTTTCCGCTGAAGATG+GGG | 0.565840 | 3_1:-8288113 | Msa0347310:CDS |
| AGTTTAGAATCTGTGGCCAA+TGG | 0.566970 | 3_1:+8277344 | None:intergenic |
| GGAAACTGGCTTGTTGCTGA+AGG | 0.571457 | 3_1:-8289106 | Msa0347310:CDS |
| GGAAACTGGCTTGTTGCTGA+AGG | 0.571457 | 3_1:-8290689 | Msa0347310:CDS |
| TGAAATGTTTCATGGTTGCT+AGG | 0.572223 | 3_1:+8287825 | None:intergenic |
| TATAGTGCCCTTGGTGATAG+GGG | 0.573582 | 3_1:-8290825 | Msa0347310:CDS |
| CTGTGAGGATACCTGTTGGA+TGG | 0.577394 | 3_1:-8286772 | Msa0347310:CDS |
| ATATCTTTGCTCTGAAAATG+GGG | 0.582869 | 3_1:-8289439 | Msa0347310:CDS |
| TTGGGATGACAATGATCCAT+CGG | 0.585148 | 3_1:-8287032 | Msa0347310:CDS |
| ACCAGAAGCAGAACCACGGT+TGG | 0.601567 | 3_1:+8288072 | None:intergenic |
| ACCAGAAGGTGAACTACGGT+CGG | 0.604107 | 3_1:+8289398 | None:intergenic |
| ACAATTCCGTCAAAGCGAGA+AGG | 0.606902 | 3_1:+8289073 | None:intergenic |
| TCAGTGACTGCAGATTATCA+AGG | 0.606979 | 3_1:-8287061 | Msa0347310:CDS |
| TATTGTAGTAATGCACATCA+AGG | 0.609097 | 3_1:+8277285 | None:intergenic |
| CATAAGAAATGACAGAGCCT+GGG | 0.612530 | 3_1:-8277213 | Msa0347310:CDS |
| ATACTTTAAAGCTTCATCAG+AGG | 0.620040 | 3_1:-8290853 | Msa0347310:intron |
| CCCAACCAGAAGGTGAACTA+CGG | 0.625802 | 3_1:+8289394 | None:intergenic |
| ACAATTCCGTCAAAGCGAGA+AGG | 0.627332 | 3_1:+8290656 | None:intergenic |
| TGAGGATACCTGTTGGATGG+TGG | 0.627765 | 3_1:-8286769 | Msa0347310:CDS |
| AGAGACACCACTAAGATCCC+AGG | 0.628976 | 3_1:+8277196 | None:intergenic |
| CCTGCGTTGGCTATCACCAA+GGG | 0.631167 | 3_1:+8289234 | None:intergenic |
| CTAAATGTTTCCCAACCAGA+AGG | 0.632163 | 3_1:+8289384 | None:intergenic |
| ATAACCATTGGAGTCTCAAG+TGG | 0.641339 | 3_1:-8276910 | Msa0347310:CDS |
| CCCAACCAGAAGCAGAACCA+CGG | 0.648810 | 3_1:+8288068 | None:intergenic |
| TAAGCAAACGAAAGAGAGTG+AGG | 0.651768 | 3_1:+8289145 | None:intergenic |
| TAAGCAAACGAAAGAGAGTG+AGG | 0.651768 | 3_1:+8290728 | None:intergenic |
| CTGAGTGCCCCTATCACCAA+GGG | 0.653521 | 3_1:+8290818 | None:intergenic |
| GGGAAGCTTATGATGTTGTG+AGG | 0.655321 | 3_1:-8277403 | Msa0347310:CDS |
| TAGCCTGAAGAACTATTACA+GGG | 0.658921 | 3_1:-8277423 | Msa0347310:CDS |
| TATCTTTCCGCTGAAGATGG+GGG | 0.660568 | 3_1:-8288112 | Msa0347310:CDS |
| TCAACCACTTGAGACTCCAA+TGG | 0.670774 | 3_1:+8276906 | None:intergenic |
| CCCTTGGTGATAGCCAACGC+AGG | 0.672026 | 3_1:-8289234 | Msa0347310:CDS |
| TGTTTAACAAGAAATTTGTG+GGG | 0.672700 | 3_1:-8287887 | Msa0347310:CDS |
| ATATTCGAATACGCACATTG+AGG | 0.674161 | 3_1:+8291096 | None:intergenic |
| GATGCTGTGAGGATACCTGT+TGG | 0.677897 | 3_1:-8286776 | Msa0347310:CDS |
| GAGCTGATGAATGAGCCACT+AGG | 0.678883 | 3_1:-8277458 | Msa0347310:intron |
| CCTGAGTGCCCCTATCACCA+AGG | 0.680553 | 3_1:+8290817 | None:intergenic |
| ACTTGACAATGCTTTCACAT+GGG | 0.683824 | 3_1:-8286693 | Msa0347310:CDS |
| TATCTTTGCTCTGAAAATGG+GGG | 0.686160 | 3_1:-8289438 | Msa0347310:CDS |
| ACTGCTGAATGGAACATACA+AGG | 0.695320 | 3_1:-8277031 | Msa0347310:CDS |
| ACTACTATTGTAGCCAACCG+TGG | 0.699222 | 3_1:-8288085 | Msa0347310:CDS |
| AAAATGGATTAGATGCTGTG+AGG | 0.731300 | 3_1:-8286787 | Msa0347310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATAATTTATTTATAT+GGG | + | chr3_1:8279007-8279026 | None:intergenic | 0.0% |
| !! | AAATTTATAATTTATTTATA+TGG | + | chr3_1:8279008-8279027 | None:intergenic | 0.0% |
| !!! | ATTATTATTTTAAATAAAAT+TGG | - | chr3_1:8289900-8289919 | Msa0347310:intron | 0.0% |
| !!! | TTATTATTTTAAATAAAATT+GGG | - | chr3_1:8289901-8289920 | Msa0347310:intron | 0.0% |
| !!! | ATATTTGTTAATAATAAAGA+CGG | + | chr3_1:8277617-8277636 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTTTTACATAC+CGG | + | chr3_1:8278460-8278479 | None:intergenic | 10.0% |
| !!! | GAAATATAATTAATTTTGTA+TGG | - | chr3_1:8279340-8279359 | Msa0347310:intron | 10.0% |
| !! | AAATAATATTAATGATTTAC+TGG | - | chr3_1:8279462-8279481 | Msa0347310:intron | 10.0% |
| !! | TTAAAATAATAATTGGTTAT+AGG | + | chr3_1:8282948-8282967 | None:intergenic | 10.0% |
| !! | ATTAATTATAGTAACATTAA+TGG | - | chr3_1:8289940-8289959 | Msa0347310:intron | 10.0% |
| !!! | AAATTATACTTTTTAAGACT+TGG | - | chr3_1:8277009-8277028 | Msa0347310:CDS | 15.0% |
| !! | TAATATTATAACCAAAATCA+GGG | + | chr3_1:8277064-8277083 | None:intergenic | 15.0% |
| !! | TTAATATTATAACCAAAATC+AGG | + | chr3_1:8277065-8277084 | None:intergenic | 15.0% |
| !!! | TTGTTTTAATTTAGATTGTA+AGG | - | chr3_1:8278231-8278250 | Msa0347310:intron | 15.0% |
| !!! | TGTTTTAATTTAGATTGTAA+GGG | - | chr3_1:8278232-8278251 | Msa0347310:intron | 15.0% |
| !!! | TTTTTATAAGTTAATTCAAG+TGG | + | chr3_1:8278290-8278309 | None:intergenic | 15.0% |
| !!! | CTTTCTTTTAAAAGTTTATA+AGG | + | chr3_1:8278323-8278342 | None:intergenic | 15.0% |
| !! | CAATAGACTATAAAAAATAT+GGG | + | chr3_1:8278363-8278382 | None:intergenic | 15.0% |
| !!! | TTTTGATATTTGATGATTTT+AGG | - | chr3_1:8278528-8278547 | Msa0347310:intron | 15.0% |
| !!! | TCTAAAATGTCTTATAATTT+GGG | + | chr3_1:8279303-8279322 | None:intergenic | 15.0% |
| !!! | TTTTTTCAAATCCTTTATTA+AGG | + | chr3_1:8279400-8279419 | None:intergenic | 15.0% |
| !! | AAATACAATAATTCATGTAA+AGG | + | chr3_1:8279635-8279654 | None:intergenic | 15.0% |
| !!! | ACATTGTTTGATTTATAAAT+TGG | + | chr3_1:8279777-8279796 | None:intergenic | 15.0% |
| !!! | ATCAAGGAATTTTTTTTTTA+AGG | - | chr3_1:8280011-8280030 | Msa0347310:intron | 15.0% |
| !!! | TTTTTTTAAGGAATATATCA+AGG | - | chr3_1:8280023-8280042 | Msa0347310:intron | 15.0% |
| !!! | GTAACTTGATTTAAAATAAT+TGG | + | chr3_1:8280393-8280412 | None:intergenic | 15.0% |
| !!! | TAATTTTCTATCAATCTTTT+TGG | - | chr3_1:8280508-8280527 | Msa0347310:intron | 15.0% |
| !!! | AGTTTTTTGATAAAAATCAA+AGG | + | chr3_1:8282712-8282731 | None:intergenic | 15.0% |
| !! | ACATGACTTAAAATAATAAT+TGG | + | chr3_1:8282955-8282974 | None:intergenic | 15.0% |
| !! | ATCAAAATTTATTATAAGCA+GGG | + | chr3_1:8286611-8286630 | None:intergenic | 15.0% |
| !!! | CTTTTGAAAAATTTAAAGAA+TGG | + | chr3_1:8287113-8287132 | None:intergenic | 15.0% |
| !! | CTTAGATATCATATTATATA+TGG | - | chr3_1:8290930-8290949 | Msa0347310:intron | 15.0% |
| !! | AATATTATAACCAAAATCAG+GGG | + | chr3_1:8277063-8277082 | None:intergenic | 20.0% |
| !! | TAGCATATACTATAATCAAA+TGG | + | chr3_1:8277545-8277564 | None:intergenic | 20.0% |
| !!! | AAAAAATGTTAAAGTACTCA+AGG | - | chr3_1:8277730-8277749 | Msa0347310:intron | 20.0% |
| !!! | AAAAATGTTAAAGTACTCAA+GGG | - | chr3_1:8277731-8277750 | Msa0347310:intron | 20.0% |
| !!! | TTTTTTAAAGTGAATAAGTG+GGG | + | chr3_1:8277853-8277872 | None:intergenic | 20.0% |
| !!! | CTTTTTTAAAGTGAATAAGT+GGG | + | chr3_1:8277854-8277873 | None:intergenic | 20.0% |
| !!! | ACTTTTTTAAAGTGAATAAG+TGG | + | chr3_1:8277855-8277874 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTCAATAGTCTAA+TGG | + | chr3_1:8277887-8277906 | None:intergenic | 20.0% |
| !! | TTAGACTATTGACAAAAAAA+CGG | - | chr3_1:8277887-8277906 | Msa0347310:intron | 20.0% |
| !! | TAGACAATGATGAATAAAAT+TGG | + | chr3_1:8277913-8277932 | None:intergenic | 20.0% |
| !!! | GTTTAATTTTAAGCCAAATA+TGG | - | chr3_1:8277933-8277952 | Msa0347310:intron | 20.0% |
| !! | TTTGTAATGCTTGATAAAAT+TGG | - | chr3_1:8278037-8278056 | Msa0347310:intron | 20.0% |
| !! | CCAATAGACTATAAAAAATA+TGG | + | chr3_1:8278364-8278383 | None:intergenic | 20.0% |
| !!! | CCATATTTTTTATAGTCTAT+TGG | - | chr3_1:8278361-8278380 | Msa0347310:intron | 20.0% |
| !!! | GTAAGTTAAGTTCTAATTTT+TGG | - | chr3_1:8278723-8278742 | Msa0347310:intron | 20.0% |
| !! | AATATCGAAACTATTATTTG+AGG | - | chr3_1:8277252-8277271 | Msa0347310:CDS | 20.0% |
| !!! | CATACTATTAGTTTTTATTG+AGG | - | chr3_1:8279129-8279148 | Msa0347310:intron | 20.0% |
| !! | ATAATTATTTCATCCTTTAG+AGG | - | chr3_1:8279247-8279266 | Msa0347310:intron | 20.0% |
| !! | TAATTATTTCATCCTTTAGA+GGG | - | chr3_1:8279248-8279267 | Msa0347310:intron | 20.0% |
| !!! | GTCTAAAATGTCTTATAATT+TGG | + | chr3_1:8279304-8279323 | None:intergenic | 20.0% |
| !! | TGCAAAATTATCCTTAATAA+AGG | - | chr3_1:8279386-8279405 | Msa0347310:intron | 20.0% |
| !! | AAAGATTGAGAGTAATAAAT+AGG | - | chr3_1:8279422-8279441 | Msa0347310:intron | 20.0% |
| !!! | TAAATAGGTAAAGGTATAAT+AGG | - | chr3_1:8279437-8279456 | Msa0347310:intron | 20.0% |
| !! | ATATTAATGATTTACTGGTA+TGG | - | chr3_1:8279467-8279486 | Msa0347310:intron | 20.0% |
| !! | AAACGACATATAATTTAAGA+CGG | - | chr3_1:8279526-8279545 | Msa0347310:intron | 20.0% |
| !!! | ACAAATGAGATACAAATTTT+TGG | - | chr3_1:8279583-8279602 | Msa0347310:intron | 20.0% |
| !! | TTGATTTATAAATTGGTCAT+GGG | + | chr3_1:8279770-8279789 | None:intergenic | 20.0% |
| !!! | TTTGATTTATAAATTGGTCA+TGG | + | chr3_1:8279771-8279790 | None:intergenic | 20.0% |
| !! | TCACATATCAAAACTTAATA+AGG | + | chr3_1:8279847-8279866 | None:intergenic | 20.0% |
| !!! | TTTTGATATGTGATGATTTT+AGG | - | chr3_1:8279854-8279873 | Msa0347310:intron | 20.0% |
| !!! | ACTTGATAAGTTCTAATTAT+TGG | - | chr3_1:8280072-8280091 | Msa0347310:intron | 20.0% |
| !!! | AATTTGAATTTGCTACAATT+TGG | + | chr3_1:8280183-8280202 | None:intergenic | 20.0% |
| !!! | TTATAATCTGAAATGTTTCA+TGG | + | chr3_1:8280216-8280235 | None:intergenic | 20.0% |
| !! | ATGAAACATTTCAGATTATA+AGG | - | chr3_1:8280215-8280234 | Msa0347310:intron | 20.0% |
| !! | GATTTAAATTGAATAGCTTA+AGG | + | chr3_1:8280311-8280330 | None:intergenic | 20.0% |
| !!! | ATACTCTGAAAAAATTACAT+TGG | - | chr3_1:8280435-8280454 | Msa0347310:intron | 20.0% |
| !! | ATGAATTTGGTTATGAATTT+AGG | - | chr3_1:8281438-8281457 | Msa0347310:intron | 20.0% |
| !! | TGAATTTGGTTATGAATTTA+GGG | - | chr3_1:8281439-8281458 | Msa0347310:intron | 20.0% |
| !! | AAATTGGAAACTTGAATTAA+GGG | + | chr3_1:8281722-8281741 | None:intergenic | 20.0% |
| !! | ATAAAGTTCCTGAATAAATA+TGG | + | chr3_1:8281957-8281976 | None:intergenic | 20.0% |
| !! | ATGAATTTAGTAAGAAGATT+TGG | + | chr3_1:8282322-8282341 | None:intergenic | 20.0% |
| !!! | TTTGACAAAGAAAAGATTTT+GGG | + | chr3_1:8282533-8282552 | None:intergenic | 20.0% |
| !!! | ATTTGACAAAGAAAAGATTT+TGG | + | chr3_1:8282534-8282553 | None:intergenic | 20.0% |
| !! | CTTAAAAAAATTATCCTTCA+TGG | - | chr3_1:8282730-8282749 | Msa0347310:intron | 20.0% |
| !!! | AATAACAAAGGTACTAAAAA+AGG | + | chr3_1:8283244-8283263 | None:intergenic | 20.0% |
| !! | ATTTACAACATTGATCAATT+TGG | - | chr3_1:8283567-8283586 | Msa0347310:intron | 20.0% |
| !! | TAAAAGTAACCCTTAAAATA+TGG | - | chr3_1:8284464-8284483 | Msa0347310:intron | 20.0% |
| !!! | AGATTTGTTCCATATTTTAA+GGG | + | chr3_1:8284476-8284495 | None:intergenic | 20.0% |
| !! | TTATGTAGATGATATTCTTA+TGG | + | chr3_1:8285711-8285730 | None:intergenic | 20.0% |
| !! | TAAGAATATCATCTACATAA+AGG | - | chr3_1:8285711-8285730 | Msa0347310:intron | 20.0% |
| !!! | TTACAATGAAATTTTTTCAC+CGG | + | chr3_1:8286056-8286075 | None:intergenic | 20.0% |
| !! | GATCAAAATTTATTATAAGC+AGG | + | chr3_1:8286612-8286631 | None:intergenic | 20.0% |
| !!! | TACTCTAATTTGAAAGTTTT+TGG | + | chr3_1:8286754-8286773 | None:intergenic | 20.0% |
| !!! | CATGGTTTATATATTTTAGA+TGG | + | chr3_1:8287498-8287517 | None:intergenic | 20.0% |
| !! | ATTAAATTTCTCTTAAGTTC+AGG | - | chr3_1:8287621-8287640 | Msa0347310:intron | 20.0% |
| !!! | CAATAAGATTATTGATGATT+TGG | + | chr3_1:8288297-8288316 | None:intergenic | 20.0% |
| !! | TAAAAGTAACCCTTAAAATA+TGG | - | chr3_1:8284464-8284483 | Msa0347310:intron | 20.0% |
| !!! | AGATTTGTTCCATATTTTAA+GGG | + | chr3_1:8284476-8284495 | None:intergenic | 20.0% |
| !!! | ATGATTTTGGTTATGAATTT+AGG | - | chr3_1:8289572-8289591 | Msa0347310:intron | 20.0% |
| !!! | TGATTTTGGTTATGAATTTA+GGG | - | chr3_1:8289573-8289592 | Msa0347310:intron | 20.0% |
| !! | TTTAAATAAAATTGGGATTG+AGG | - | chr3_1:8289908-8289927 | Msa0347310:intron | 20.0% |
| !! | TTAAATAAAATTGGGATTGA+GGG | - | chr3_1:8289909-8289928 | Msa0347310:intron | 20.0% |
| !!! | GGTTAACAAAGTTTTAAATA+AGG | + | chr3_1:8290464-8290483 | None:intergenic | 20.0% |
| !! | CAATAAAGTTAACTATCATT+GGG | + | chr3_1:8290902-8290921 | None:intergenic | 20.0% |
| !! | TCAATAAAGTTAACTATCAT+TGG | + | chr3_1:8290903-8290922 | None:intergenic | 20.0% |
| !! | AGATATCATATTATATATGG+AGG | - | chr3_1:8290933-8290952 | Msa0347310:intron | 20.0% |
| !!! | TGTTTTTACTTTTCTATTGT+TGG | - | chr3_1:8290965-8290984 | Msa0347310:intron | 20.0% |
| ! | TAAAATCATGCATTGTTAGT+AGG | - | chr3_1:8277082-8277101 | Msa0347310:intron | 25.0% |
| ! | GAAATAAGAATAAGAGAATG+TGG | - | chr3_1:8277123-8277142 | Msa0347310:intron | 25.0% |
| ! | CTATTATTTGAGCTTCTTAT+TGG | - | chr3_1:8277262-8277281 | Msa0347310:CDS | 25.0% |
| !! | GTTGTTGCAAATAATAGTTT+TGG | + | chr3_1:8277523-8277542 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | - | chr3_1:8277696-8277715 | Msa0347310:intron | 25.0% |
| !!! | TTAACATTTTTTTGAACCCT+GGG | + | chr3_1:8277722-8277741 | None:intergenic | 25.0% |
| !!! | TTTAACATTTTTTTGAACCC+TGG | + | chr3_1:8277723-8277742 | None:intergenic | 25.0% |
| !!! | GATATTTGATGATTTTAGGA+TGG | - | chr3_1:8278532-8278551 | Msa0347310:intron | 25.0% |
| ! | GGTAAGTAATGTATATATCT+AGG | - | chr3_1:8278669-8278688 | Msa0347310:intron | 25.0% |
| !! | CTATTATTTGAGGTTCTTAT+TGG | - | chr3_1:8278845-8278864 | Msa0347310:intron | 25.0% |
| ! | GAGAAAATCAAACATTTCAA+AGG | + | chr3_1:8279107-8279126 | None:intergenic | 25.0% |
| !! | AATTATTTCATCCTTTAGAG+GGG | - | chr3_1:8279249-8279268 | Msa0347310:intron | 25.0% |
| ! | TGAGAGTAATAAATAGGTAA+AGG | - | chr3_1:8279428-8279447 | Msa0347310:intron | 25.0% |
| ! | GGTAAGTTATTTATGTATCA+AGG | - | chr3_1:8279995-8280014 | Msa0347310:intron | 25.0% |
| !!! | GTTAAACACTCTAAAATTGA+AGG | + | chr3_1:8280131-8280150 | None:intergenic | 25.0% |
| ! | AGTGTTTAACAAGAAATTTG+TGG | - | chr3_1:8280141-8280160 | Msa0347310:intron | 25.0% |
| ! | GTGTTTAACAAGAAATTTGT+GGG | - | chr3_1:8280142-8280161 | Msa0347310:intron | 25.0% |
| ! | TGTTTAACAAGAAATTTGTG+GGG | - | chr3_1:8280143-8280162 | Msa0347310:intron | 25.0% |
| ! | TAAATTGAATAGCTTAAGGA+TGG | + | chr3_1:8280307-8280326 | None:intergenic | 25.0% |
| !!! | ATTACATTGGTCTCATATTT+TGG | - | chr3_1:8280448-8280467 | Msa0347310:intron | 25.0% |
| !!! | TTTCTATCAATCTTTTTGGT+TGG | - | chr3_1:8280512-8280531 | Msa0347310:intron | 25.0% |
| !!! | TTTAGTTTGTGATTTTACCA+TGG | - | chr3_1:8280573-8280592 | Msa0347310:intron | 25.0% |
| ! | TCTACATAAGTGTTTATAAG+TGG | + | chr3_1:8280644-8280663 | None:intergenic | 25.0% |
| !!! | CTAATATTAGCTCTTTTGTT+GGG | + | chr3_1:8280828-8280847 | None:intergenic | 25.0% |
| !!! | TCTAATATTAGCTCTTTTGT+TGG | + | chr3_1:8280829-8280848 | None:intergenic | 25.0% |
| ! | AGGATTAATAACTAAAGTCT+TGG | + | chr3_1:8280915-8280934 | None:intergenic | 25.0% |
| ! | ATTGTAATATGAAAAACCGA+TGG | + | chr3_1:8281017-8281036 | None:intergenic | 25.0% |
| ! | ACAATTGTAAACACATTACA+AGG | - | chr3_1:8281032-8281051 | Msa0347310:intron | 25.0% |
| !!! | AAATAGTAAACTTGCTAGAT+TGG | - | chr3_1:8281135-8281154 | Msa0347310:intron | 25.0% |
| ! | TTCAGATTTATGTCACAAAA+TGG | - | chr3_1:8281227-8281246 | Msa0347310:intron | 25.0% |
| ! | TCTAATTCAAGCAATGAATT+TGG | - | chr3_1:8281425-8281444 | Msa0347310:intron | 25.0% |
| !! | AACAAACTTTTATACCCTAA+AGG | - | chr3_1:8281634-8281653 | Msa0347310:intron | 25.0% |
| !! | ACAAACTTTTATACCCTAAA+GGG | - | chr3_1:8281635-8281654 | Msa0347310:intron | 25.0% |
| ! | GGTATATATTATACCCTTTA+GGG | + | chr3_1:8281651-8281670 | None:intergenic | 25.0% |
| ! | TATTAGACTATATACACGTT+GGG | + | chr3_1:8281673-8281692 | None:intergenic | 25.0% |
| ! | GAAATTGGAAACTTGAATTA+AGG | + | chr3_1:8281723-8281742 | None:intergenic | 25.0% |
| ! | CTTCAAATTTAACATACTTC+CGG | - | chr3_1:8282056-8282075 | Msa0347310:intron | 25.0% |
| !!! | ATTAAGATTTTGAGAACTGA+TGG | + | chr3_1:8282215-8282234 | None:intergenic | 25.0% |
| ! | CTTTGTCAAATAAATGATTG+AGG | - | chr3_1:8282543-8282562 | Msa0347310:intron | 25.0% |
| !!! | GATTGAGGTTTCTAAAATTT+AGG | - | chr3_1:8282558-8282577 | Msa0347310:intron | 25.0% |
| ! | CTATGAATAAAAAAGGTAGA+TGG | + | chr3_1:8282607-8282626 | None:intergenic | 25.0% |
| ! | TCTGCTACTATGAATAAAAA+AGG | + | chr3_1:8282614-8282633 | None:intergenic | 25.0% |
| !!! | TGCTATAATTTTGAGAAGTT+TGG | + | chr3_1:8283154-8283173 | None:intergenic | 25.0% |
| ! | TCTTATCAAAACAAGAAGAA+AGG | + | chr3_1:8283199-8283218 | None:intergenic | 25.0% |
| ! | AAAGGAAAGAATAACTCTAA+GGG | + | chr3_1:8283286-8283305 | None:intergenic | 25.0% |
| !!! | TTCAAGGTTTGATTTTATTG+TGG | + | chr3_1:8283479-8283498 | None:intergenic | 25.0% |
| ! | TTATGAGAACTTTATCTTCA+AGG | + | chr3_1:8283495-8283514 | None:intergenic | 25.0% |
| ! | AAAGTTTGAATTGATGCAAA+TGG | + | chr3_1:8283623-8283642 | None:intergenic | 25.0% |
| ! | TCACACATCAAGTTTATTAT+TGG | + | chr3_1:8284020-8284039 | None:intergenic | 25.0% |
| ! | AGAAACTCATATCATTATAG+TGG | + | chr3_1:8284199-8284218 | None:intergenic | 25.0% |
| !!! | TAAACCCTAGTTTTTTATGT+TGG | - | chr3_1:8284383-8284402 | Msa0347310:intron | 25.0% |
| ! | AAAAAGAGTAGTAGAAAACA+GGG | + | chr3_1:8284417-8284436 | None:intergenic | 25.0% |
| !!! | CAGATTTGTTCCATATTTTA+AGG | + | chr3_1:8284477-8284496 | None:intergenic | 25.0% |
| ! | GTAAGAGTTAACTTAAAATC+AGG | + | chr3_1:8284657-8284676 | None:intergenic | 25.0% |
| ! | ACTTGGTATGGATATTATAA+GGG | + | chr3_1:8285600-8285619 | None:intergenic | 25.0% |
| ! | TACTTGGTATGGATATTATA+AGG | + | chr3_1:8285601-8285620 | None:intergenic | 25.0% |
| ! | GTTTGATGAGTTTCTTATAA+AGG | + | chr3_1:8285813-8285832 | None:intergenic | 25.0% |
| ! | TGTTGAAGAAATCTTTGTAT+GGG | + | chr3_1:8285868-8285887 | None:intergenic | 25.0% |
| ! | TTGTTGAAGAAATCTTTGTA+TGG | + | chr3_1:8285869-8285888 | None:intergenic | 25.0% |
| !!! | TGATTTTGAGTTAGAACAAA+TGG | + | chr3_1:8285984-8286003 | None:intergenic | 25.0% |
| ! | GGTAAAACATTGTTCTATAA+GGG | + | chr3_1:8286032-8286051 | None:intergenic | 25.0% |
| ! | TGGTAAAACATTGTTCTATA+AGG | + | chr3_1:8286033-8286052 | None:intergenic | 25.0% |
| ! | TTCATTACCTAAGAATCAAA+GGG | + | chr3_1:8286191-8286210 | None:intergenic | 25.0% |
| ! | TTTCATTACCTAAGAATCAA+AGG | + | chr3_1:8286192-8286211 | None:intergenic | 25.0% |
| ! | ATTAATCCACCTAATAGATA+CGG | + | chr3_1:8286379-8286398 | None:intergenic | 25.0% |
| !!! | ATAATAAATTTTGATCCTCC+AGG | - | chr3_1:8286616-8286635 | Msa0347310:intron | 25.0% |
| !! | TATCGATGATTATTCTAGAA+GGG | + | chr3_1:8287169-8287188 | None:intergenic | 25.0% |
| ! | TTATCGATGATTATTCTAGA+AGG | + | chr3_1:8287170-8287189 | None:intergenic | 25.0% |
| ! | ATATCTATAAGCATGTTTGA+TGG | + | chr3_1:8287603-8287622 | None:intergenic | 25.0% |
| ! | TGGGATATTGAAAAGTTTAT+CGG | + | chr3_1:8288656-8288675 | None:intergenic | 25.0% |
| ! | TCACACATCAAGTTTATTAT+TGG | + | chr3_1:8284020-8284039 | None:intergenic | 25.0% |
| ! | AGAAACTCATATCATTATAG+TGG | + | chr3_1:8284199-8284218 | None:intergenic | 25.0% |
| !!! | TAAACCCTAGTTTTTTATGT+TGG | - | chr3_1:8284383-8284402 | Msa0347310:intron | 25.0% |
| ! | AAAAAGAGTAGTAGAAAACA+GGG | + | chr3_1:8284417-8284436 | None:intergenic | 25.0% |
| !!! | CAGATTTGTTCCATATTTTA+AGG | + | chr3_1:8284477-8284496 | None:intergenic | 25.0% |
| ! | GTAAGAGTTAACTTAAAATC+AGG | + | chr3_1:8284657-8284676 | None:intergenic | 25.0% |
| !!! | AAACTGTTTTTTTCCATTCA+TGG | - | chr3_1:8289423-8289442 | Msa0347310:CDS | 25.0% |
| ! | ATATAGAAATTGAGAGAAGA+AGG | - | chr3_1:8289604-8289623 | Msa0347310:intron | 25.0% |
| ! | TATAGAAATTGAGAGAAGAA+GGG | - | chr3_1:8289605-8289624 | Msa0347310:intron | 25.0% |
| ! | GGTATATATTATACCTGTTA+GGG | + | chr3_1:8289792-8289811 | None:intergenic | 25.0% |
| ! | TATTAGACTATATACCTGTT+GGG | + | chr3_1:8289814-8289833 | None:intergenic | 25.0% |
| ! | AAATTGAATGTTGCACAAAA+GGG | + | chr3_1:8289871-8289890 | None:intergenic | 25.0% |
| ! | TAAATTGAATGTTGCACAAA+AGG | + | chr3_1:8289872-8289891 | None:intergenic | 25.0% |
| ! | TCATAGAATTCTTAGCAAAA+AGG | - | chr3_1:8290166-8290185 | Msa0347310:intron | 25.0% |
| ! | ATAAAGTTGTGAGATTCATA+TGG | + | chr3_1:8290300-8290319 | None:intergenic | 25.0% |
| ! | GATATATCAAACATTGGAAA+TGG | + | chr3_1:8290330-8290349 | None:intergenic | 25.0% |
| ! | TACAGTCATAGAAAAAGTTT+AGG | - | chr3_1:8290542-8290561 | Msa0347310:intron | 25.0% |
| ! | ACATGATCACATAAGTATTT+GGG | + | chr3_1:8290661-8290680 | None:intergenic | 25.0% |
| ! | GCATTACTACAATATGTATT+CGG | - | chr3_1:8290754-8290773 | Msa0347310:CDS | 25.0% |
| ! | ATGTATTCGGATAAATTCAA+TGG | - | chr3_1:8290767-8290786 | Msa0347310:CDS | 25.0% |
| !!! | TTTACTTTTCTATTGTTGGT+AGG | - | chr3_1:8290969-8290988 | Msa0347310:intron | 25.0% |
| !!! | TTACTTTTCTATTGTTGGTA+GGG | - | chr3_1:8290970-8290989 | Msa0347310:intron | 25.0% |
| !! | ATACTTTAAAGCTTCATCAG+AGG | - | chr3_1:8277177-8277196 | Msa0347310:intron | 30.0% |
| ACTCAGGATCATTCAAAAAA+TGG | - | chr3_1:8277229-8277248 | Msa0347310:CDS | 30.0% | |
| AATTGTCAACAAAGATCTCT+TGG | - | chr3_1:8277391-8277410 | Msa0347310:CDS | 30.0% | |
| !!! | GTTGCAAATAATAGTTTTGG+TGG | + | chr3_1:8277520-8277539 | None:intergenic | 30.0% |
| GCTCGTAGTAAAAAATCAAT+TGG | + | chr3_1:8277812-8277831 | None:intergenic | 30.0% | |
| !!! | ATTGATTTTTTACTACGAGC+TGG | - | chr3_1:8277812-8277831 | Msa0347310:intron | 30.0% |
| GTAATGCTTGATAAAATTGG+TGG | - | chr3_1:8278040-8278059 | Msa0347310:intron | 30.0% | |
| CATAAAATATGCAAGGTTTG+GGG | + | chr3_1:8278115-8278134 | None:intergenic | 30.0% | |
| GCATAAAATATGCAAGGTTT+GGG | + | chr3_1:8278116-8278135 | None:intergenic | 30.0% | |
| TGCATAAAATATGCAAGGTT+TGG | + | chr3_1:8278117-8278136 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr3_1:8278122-8278141 | None:intergenic | 30.0% | |
| !! | ACATATCTTTGCTCTGAAAA+TGG | - | chr3_1:8278589-8278608 | Msa0347310:intron | 30.0% |
| !! | CATATCTTTGCTCTGAAAAT+GGG | - | chr3_1:8278590-8278609 | Msa0347310:intron | 30.0% |
| !! | ATATCTTTGCTCTGAAAATG+GGG | - | chr3_1:8278591-8278610 | Msa0347310:intron | 30.0% |
| AATCTTGTCTTGATTACACT+TGG | - | chr3_1:8278701-8278720 | Msa0347310:intron | 30.0% | |
| ! | ATGACTCATCCTTCAATTTT+AGG | - | chr3_1:8278770-8278789 | Msa0347310:intron | 30.0% |
| ! | TGACTCATCCTTCAATTTTA+GGG | - | chr3_1:8278771-8278790 | Msa0347310:intron | 30.0% |
| AATTGTCAACAAAGATCTCT+TGG | - | chr3_1:8277391-8277410 | Msa0347310:CDS | 30.0% | |
| AGTTAGGATGATTGTATTAG+TGG | + | chr3_1:8279207-8279226 | None:intergenic | 30.0% | |
| GTAGTTAGATTAGATGAGTT+AGG | + | chr3_1:8279223-8279242 | None:intergenic | 30.0% | |
| ! | ATGTCTTATAATTTGGGACT+GGG | + | chr3_1:8279297-8279316 | None:intergenic | 30.0% |
| ! | AATGTCTTATAATTTGGGAC+TGG | + | chr3_1:8279298-8279317 | None:intergenic | 30.0% |
| GGGAAAAAGATATTATGAGT+TGG | - | chr3_1:8279361-8279380 | Msa0347310:intron | 30.0% | |
| ! | GACATATAATTTAAGACGGA+GGG | - | chr3_1:8279530-8279549 | Msa0347310:intron | 30.0% |
| CGGACTCTTAAAAAATATGA+GGG | + | chr3_1:8279664-8279683 | None:intergenic | 30.0% | |
| ACGGACTCTTAAAAAATATG+AGG | + | chr3_1:8279665-8279684 | None:intergenic | 30.0% | |
| !!! | CATATTTTTTAAGAGTCCGT+AGG | - | chr3_1:8279665-8279684 | Msa0347310:intron | 30.0% |
| !! | GATATGTGATGATTTTAGGA+TGG | - | chr3_1:8279858-8279877 | Msa0347310:intron | 30.0% |
| !! | TGCTTTGATTCGAATTTTGA+GGG | + | chr3_1:8280254-8280273 | None:intergenic | 30.0% |
| !! | ATGCTTTGATTCGAATTTTG+AGG | + | chr3_1:8280255-8280274 | None:intergenic | 30.0% |
| ! | ATTCGAATCAAAGCATCAAA+TGG | - | chr3_1:8280259-8280278 | Msa0347310:intron | 30.0% |
| ! | AAGCATCAAATGGTCTATTT+TGG | - | chr3_1:8280269-8280288 | Msa0347310:intron | 30.0% |
| CTCTTTACTGTAAAGAATGT+TGG | + | chr3_1:8280679-8280698 | None:intergenic | 30.0% | |
| CAACATTCTTTACAGTAAAG+AGG | - | chr3_1:8280677-8280696 | Msa0347310:intron | 30.0% | |
| ! | GAAATGGATTCTACATAAAG+TGG | - | chr3_1:8280783-8280802 | Msa0347310:intron | 30.0% |
| AGATTATCAAGGCACAAATT+GGG | - | chr3_1:8280980-8280999 | Msa0347310:intron | 30.0% | |
| TACCAACTTACTAATGGTTA+TGG | - | chr3_1:8281059-8281078 | Msa0347310:intron | 30.0% | |
| CAGTTATGTATGAATTCCAA+TGG | + | chr3_1:8281199-8281218 | None:intergenic | 30.0% | |
| TACAACATGCCTTATATAAG+AGG | - | chr3_1:8281536-8281555 | Msa0347310:intron | 30.0% | |
| GTGAATAAGCCTCTTATATA+AGG | + | chr3_1:8281548-8281567 | None:intergenic | 30.0% | |
| !! | AAGTTTGTTGCAAGATAGTT+AGG | + | chr3_1:8281623-8281642 | None:intergenic | 30.0% |
| GGGTATATATTATACCCTTT+AGG | + | chr3_1:8281652-8281671 | None:intergenic | 30.0% | |
| ATTAGACTATATACACGTTG+GGG | + | chr3_1:8281672-8281691 | None:intergenic | 30.0% | |
| GTATTAGACTATATACACGT+TGG | + | chr3_1:8281674-8281693 | None:intergenic | 30.0% | |
| CTTGATTGGAATGATGAAAT+TGG | + | chr3_1:8281738-8281757 | None:intergenic | 30.0% | |
| CTAAGGCAATTAAGATTGAA+AGG | + | chr3_1:8281778-8281797 | None:intergenic | 30.0% | |
| GTTCCTGAATAAATATGGAT+GGG | + | chr3_1:8281952-8281971 | None:intergenic | 30.0% | |
| AGTTCCTGAATAAATATGGA+TGG | + | chr3_1:8281953-8281972 | None:intergenic | 30.0% | |
| ! | CTGCAACATACATTTTGAAT+AGG | + | chr3_1:8281999-8282018 | None:intergenic | 30.0% |
| AATATGCCAAATACTTTCTG+GGG | + | chr3_1:8282036-8282055 | None:intergenic | 30.0% | |
| GAATATGCCAAATACTTTCT+GGG | + | chr3_1:8282037-8282056 | None:intergenic | 30.0% | |
| AGAATATGCCAAATACTTTC+TGG | + | chr3_1:8282038-8282057 | None:intergenic | 30.0% | |
| GAAATAGAACATTGTTTGAC+AGG | + | chr3_1:8282083-8282102 | None:intergenic | 30.0% | |
| GTCTTAGTAGAAAAGAAAAG+TGG | + | chr3_1:8282245-8282264 | None:intergenic | 30.0% | |
| ! | CGAATATTTCATCAGTTTTG+TGG | + | chr3_1:8282345-8282364 | None:intergenic | 30.0% |
| GTAGTGTATTCTGATGTATA+TGG | + | chr3_1:8282398-8282417 | None:intergenic | 30.0% | |
| TTAGATTTGAATGCAGCTTT+AGG | - | chr3_1:8282449-8282468 | Msa0347310:intron | 30.0% | |
| ! | TTGGTAATACTTGCTTGATA+GGG | + | chr3_1:8282481-8282500 | None:intergenic | 30.0% |
| AACTTTCATATCAGTCTGAA+AGG | - | chr3_1:8282652-8282671 | Msa0347310:intron | 30.0% | |
| AAAGGTTCTATTCTTTGCAA+GGG | - | chr3_1:8282670-8282689 | Msa0347310:intron | 30.0% | |
| ATAGCTATTGAAGGAAAGAA+CGG | + | chr3_1:8282851-8282870 | None:intergenic | 30.0% | |
| GAAAGATGGTTCTTAAATAC+TGG | + | chr3_1:8282989-8283008 | None:intergenic | 30.0% | |
| !! | GAAAGGTTTTGATAAGAAGA+AGG | + | chr3_1:8283182-8283201 | None:intergenic | 30.0% |
| TGGTCAAAAGGAAATAACAA+AGG | + | chr3_1:8283256-8283275 | None:intergenic | 30.0% | |
| GAAAGGAAAGAATAACTCTA+AGG | + | chr3_1:8283287-8283306 | None:intergenic | 30.0% | |
| GATAAGAAGAACTTCAAGAA+AGG | + | chr3_1:8283304-8283323 | None:intergenic | 30.0% | |
| TGAAGAATTGCAAAGTTCTT+TGG | + | chr3_1:8283416-8283435 | None:intergenic | 30.0% | |
| TTGCAATTCTTCAATCTTCA+AGG | - | chr3_1:8283423-8283442 | Msa0347310:intron | 30.0% | |
| !! | CACATCTTTTGATTCTTGTA+TGG | - | chr3_1:8283450-8283469 | Msa0347310:intron | 30.0% |
| !! | AAGGTTTGATTTTATTGTGG+TGG | + | chr3_1:8283476-8283495 | None:intergenic | 30.0% |
| GTAAATCAGATGAAATCTTG+TGG | + | chr3_1:8283553-8283572 | None:intergenic | 30.0% | |
| ATTCAACAAAGTGTAGATTC+AGG | + | chr3_1:8283760-8283779 | None:intergenic | 30.0% | |
| ATCTACACTTTGTTGAATGA+AGG | - | chr3_1:8283762-8283781 | Msa0347310:intron | 30.0% | |
| TTGTTGGAAATTGTGCAAAA+CGG | + | chr3_1:8283883-8283902 | None:intergenic | 30.0% | |
| ! | AATGATGAAGAACTTGTTTG+TGG | + | chr3_1:8283914-8283933 | None:intergenic | 30.0% |
| ACACTTGAAAATGGAAACTA+GGG | + | chr3_1:8283949-8283968 | None:intergenic | 30.0% | |
| AACACTTGAAAATGGAAACT+AGG | + | chr3_1:8283950-8283969 | None:intergenic | 30.0% | |
| !!! | TAGTTTCCATTTTCAAGTGT+TGG | - | chr3_1:8283949-8283968 | Msa0347310:intron | 30.0% |
| !! | ATGAGTATTGAAACTTGTTG+CGG | - | chr3_1:8283975-8283994 | Msa0347310:intron | 30.0% |
| CATCAAGTTTATTATTGGTG+TGG | + | chr3_1:8284015-8284034 | None:intergenic | 30.0% | |
| ACAAAATAAAACAGCAAGAG+AGG | - | chr3_1:8284091-8284110 | Msa0347310:intron | 30.0% | |
| ! | CTCATATCATTATAGTGGAA+CGG | + | chr3_1:8284194-8284213 | None:intergenic | 30.0% |
| GAAGCCAACATAAAAAACTA+GGG | + | chr3_1:8284390-8284409 | None:intergenic | 30.0% | |
| AGAAGCCAACATAAAAAACT+AGG | + | chr3_1:8284391-8284410 | None:intergenic | 30.0% | |
| GAAAAAGAGTAGTAGAAAAC+AGG | + | chr3_1:8284418-8284437 | None:intergenic | 30.0% | |
| !! | ACTCTTTTTCATCTGATACA+AGG | - | chr3_1:8284428-8284447 | Msa0347310:intron | 30.0% |
| ! | AAGGTGATTGATGGTTAAAT+TGG | + | chr3_1:8284714-8284733 | None:intergenic | 30.0% |
| ATTGAAGAATAGATGAAGGT+TGG | + | chr3_1:8284747-8284766 | None:intergenic | 30.0% | |
| CTTCATTGAAGAATAGATGA+AGG | + | chr3_1:8284751-8284770 | None:intergenic | 30.0% | |
| ! | ATCAAGATTCAAGTATTGCT+TGG | + | chr3_1:8284784-8284803 | None:intergenic | 30.0% |
| CAATACTTGAATCTTGATCT+TGG | - | chr3_1:8284786-8284805 | Msa0347310:intron | 30.0% | |
| !! | TCTTGATCTTGGTAATGATT+TGG | - | chr3_1:8284797-8284816 | Msa0347310:intron | 30.0% |
| ! | AAAGGTATGATTGGAGAAAT+GGG | + | chr3_1:8285011-8285030 | None:intergenic | 30.0% |
| ! | ATATGGTTGAAAGGTATGAT+TGG | + | chr3_1:8285020-8285039 | None:intergenic | 30.0% |
| AATCATACCTTTCAACCATA+TGG | - | chr3_1:8285019-8285038 | Msa0347310:intron | 30.0% | |
| !! | GGTTTTGTGTTTACTTTGTT+CGG | + | chr3_1:8285140-8285159 | None:intergenic | 30.0% |
| !! | GGGTTCTAAGATATTTGAAT+GGG | + | chr3_1:8285274-8285293 | None:intergenic | 30.0% |
| !! | TGGGTTCTAAGATATTTGAA+TGG | + | chr3_1:8285275-8285294 | None:intergenic | 30.0% |
| ATGCAATAAGTGTGATAAGT+CGG | + | chr3_1:8285340-8285359 | None:intergenic | 30.0% | |
| ACTTATCACACTTATTGCAT+AGG | - | chr3_1:8285340-8285359 | Msa0347310:intron | 30.0% | |
| !! | ATGAAAGATTCTAAAGTCGT+TGG | + | chr3_1:8285509-8285528 | None:intergenic | 30.0% |
| ! | GAATGATGAATTTGAGATGA+AGG | + | chr3_1:8285645-8285664 | None:intergenic | 30.0% |
| TATCATCTACATAAAGGAGA+AGG | - | chr3_1:8285717-8285736 | Msa0347310:intron | 30.0% | |
| !! | TTGTTCTATAAGGGTACTTA+TGG | + | chr3_1:8286023-8286042 | None:intergenic | 30.0% |
| ! | ATAGAACAATGTTTTACCAC+CGG | - | chr3_1:8286034-8286053 | Msa0347310:intron | 30.0% |
| GAATGAGGAAATACTTTCAT+TGG | + | chr3_1:8286239-8286258 | None:intergenic | 30.0% | |
| ATTAGAAAGCAATGAAAGCA+AGG | + | chr3_1:8286278-8286297 | None:intergenic | 30.0% | |
| CATTCAAAGCATAACATATG+AGG | - | chr3_1:8286344-8286363 | Msa0347310:intron | 30.0% | |
| GATAGAGAAAATTCAGTTTG+AGG | + | chr3_1:8286521-8286540 | None:intergenic | 30.0% | |
| ACACTTGTAGAAAATCAGAT+TGG | + | chr3_1:8287087-8287106 | None:intergenic | 30.0% | |
| ! | TGATTATTCTAGAAGGGTAT+GGG | + | chr3_1:8287163-8287182 | None:intergenic | 30.0% |
| ! | ATGATTATTCTAGAAGGGTA+TGG | + | chr3_1:8287164-8287183 | None:intergenic | 30.0% |
| TTCTGTGATAATTGCACATT+AGG | + | chr3_1:8287321-8287340 | None:intergenic | 30.0% | |
| GTGCATTAGTTATAGCTAAA+GGG | + | chr3_1:8287530-8287549 | None:intergenic | 30.0% | |
| TATTGTACTAGAATTGAACG+TGG | + | chr3_1:8287573-8287592 | None:intergenic | 30.0% | |
| AATAAGGCTTGCAAAATTCA+AGG | + | chr3_1:8287714-8287733 | None:intergenic | 30.0% | |
| !! | AAAGGAGTACTTTGAAACTT+TGG | + | chr3_1:8287772-8287791 | None:intergenic | 30.0% |
| ! | TGTTTTCTTTGTCACAACTA+TGG | + | chr3_1:8287969-8287988 | None:intergenic | 30.0% |
| TTTGAACTTGGTTAACTCTT+TGG | - | chr3_1:8288124-8288143 | Msa0347310:intron | 30.0% | |
| TTCAAGGATACAATGCTTTA+TGG | + | chr3_1:8288197-8288216 | None:intergenic | 30.0% | |
| TGTATCCTTGAAATTCTCAA+AGG | - | chr3_1:8288205-8288224 | Msa0347310:intron | 30.0% | |
| ! | TAAGTCCTTTGAGAATTTCA+AGG | + | chr3_1:8288213-8288232 | None:intergenic | 30.0% |
| TTGAAATTCTCAAAGGACTT+AGG | - | chr3_1:8288212-8288231 | Msa0347310:intron | 30.0% | |
| AATCAATAACCAGGTATCAT+GGG | + | chr3_1:8288686-8288705 | None:intergenic | 30.0% | |
| AAATCAATAACCAGGTATCA+TGG | + | chr3_1:8288687-8288706 | None:intergenic | 30.0% | |
| CATCAAGTTTATTATTGGTG+TGG | + | chr3_1:8284015-8284034 | None:intergenic | 30.0% | |
| ACAAAATAAAACAGCAAGAG+AGG | - | chr3_1:8284091-8284110 | Msa0347310:intron | 30.0% | |
| ! | CTCATATCATTATAGTGGAA+CGG | + | chr3_1:8284194-8284213 | None:intergenic | 30.0% |
| GAAGCCAACATAAAAAACTA+GGG | + | chr3_1:8284390-8284409 | None:intergenic | 30.0% | |
| AGAAGCCAACATAAAAAACT+AGG | + | chr3_1:8284391-8284410 | None:intergenic | 30.0% | |
| GAAAAAGAGTAGTAGAAAAC+AGG | + | chr3_1:8284418-8284437 | None:intergenic | 30.0% | |
| !! | ACTCTTTTTCATCTGATACA+AGG | - | chr3_1:8284428-8284447 | Msa0347310:intron | 30.0% |
| AATCAATGTCTAGAAACGTT+GGG | + | chr3_1:8289456-8289475 | None:intergenic | 30.0% | |
| TAATCAATGTCTAGAAACGT+TGG | + | chr3_1:8289457-8289476 | None:intergenic | 30.0% | |
| ! | TCTAATGCAAGCAATGATTT+TGG | - | chr3_1:8289559-8289578 | Msa0347310:intron | 30.0% |
| ATAGAAATTGAGAGAAGAAG+GGG | - | chr3_1:8289606-8289625 | Msa0347310:intron | 30.0% | |
| TAAAGCATGCCTTATATAAG+AGG | - | chr3_1:8289677-8289696 | Msa0347310:intron | 30.0% | |
| GTGAATAAGCCTCTTATATA+AGG | + | chr3_1:8281548-8281567 | None:intergenic | 30.0% | |
| ! | ACAAACTTTTATACCCTAAC+AGG | - | chr3_1:8289776-8289795 | Msa0347310:intron | 30.0% |
| GGGTATATATTATACCTGTT+AGG | + | chr3_1:8289793-8289812 | None:intergenic | 30.0% | |
| ATTAGACTATATACCTGTTG+GGG | + | chr3_1:8289813-8289832 | None:intergenic | 30.0% | |
| GTATTAGACTATATACCTGT+TGG | + | chr3_1:8289815-8289834 | None:intergenic | 30.0% | |
| ! | TTTATAACTTGCAGTAAGCA+TGG | - | chr3_1:8290024-8290043 | Msa0347310:intron | 30.0% |
| ! | TTATAACTTGCAGTAAGCAT+GGG | - | chr3_1:8290025-8290044 | Msa0347310:intron | 30.0% |
| !!! | AAAATGGTTTTGAGCATAGT+GGG | - | chr3_1:8290088-8290107 | Msa0347310:intron | 30.0% |
| AAGAGATGGATATACAGAAT+GGG | - | chr3_1:8290113-8290132 | Msa0347310:intron | 30.0% | |
| TGTTCTTAACATTCTGTCTA+AGG | + | chr3_1:8290228-8290247 | None:intergenic | 30.0% | |
| CATGTGGATATATCAAACAT+TGG | + | chr3_1:8290336-8290355 | None:intergenic | 30.0% | |
| CAATGTTTGATATATCCACA+TGG | - | chr3_1:8290334-8290353 | Msa0347310:intron | 30.0% | |
| ! | TTTCGAGTAGGTAATTCATT+TGG | + | chr3_1:8290485-8290504 | None:intergenic | 30.0% |
| ! | TAAAGAAATCAGTTTCGAGT+AGG | + | chr3_1:8290497-8290516 | None:intergenic | 30.0% |
| AGTCATAGAAAAAGTTTAGG+AGG | - | chr3_1:8290545-8290564 | Msa0347310:intron | 30.0% | |
| GACATGATCACATAAGTATT+TGG | + | chr3_1:8290662-8290681 | None:intergenic | 30.0% | |
| TATTGTAGTAATGCACATCA+AGG | + | chr3_1:8290748-8290767 | None:intergenic | 30.0% | |
| !!! | TCAAATGCTCTTAGTTTTGT+AGG | - | chr3_1:8290860-8290879 | Msa0347310:intron | 30.0% |
| AAAGTTAACTATCATTGGGA+AGG | + | chr3_1:8290898-8290917 | None:intergenic | 30.0% | |
| !! | TACTTTTCTATTGTTGGTAG+GGG | - | chr3_1:8290971-8290990 | Msa0347310:intron | 30.0% |
| TTTGTGCTTGGATATATCTT+TGG | + | chr3_1:8291043-8291062 | None:intergenic | 30.0% | |
| AAGATATATCCAAGCACAAA+TGG | - | chr3_1:8291043-8291062 | Msa0347310:intron | 30.0% | |
| ACAAATGTCAGTATAACCAT+TGG | - | chr3_1:8291108-8291127 | Msa0347310:CDS | 30.0% | |
| ATATTCGAATACGCACATTG+AGG | + | chr3_1:8276937-8276956 | None:intergenic | 35.0% | |
| ! | CTTTGAGAAGATTGTTGAAG+AGG | - | chr3_1:8276957-8276976 | Msa0347310:CDS | 35.0% |
| TGTTGAAGAGGATACAACAA+AGG | - | chr3_1:8276969-8276988 | Msa0347310:CDS | 35.0% | |
| ATTATAACCAAAATCAGGGG+CGG | + | chr3_1:8277060-8277079 | None:intergenic | 35.0% | |
| GCTTACAAAGCTGTGAATTT+AGG | - | chr3_1:8277320-8277339 | Msa0347310:CDS | 35.0% | |
| AAGCTGTGAATTTAGGAAAC+TGG | - | chr3_1:8277327-8277346 | Msa0347310:CDS | 35.0% | |
| AAACATGTTAAGAGCTCAGT+TGG | - | chr3_1:8277669-8277688 | Msa0347310:intron | 35.0% | |
| CATAATATATGTAAGGCCCA+GGG | - | chr3_1:8277703-8277722 | Msa0347310:intron | 35.0% | |
| ACTCAAGGGAAAATGATGAT+AGG | - | chr3_1:8277745-8277764 | Msa0347310:intron | 35.0% | |
| GAGAATTTGTATCTTGAACG+AGG | + | chr3_1:8277780-8277799 | None:intergenic | 35.0% | |
| AGTAAAAAATCAATTGGCCG+TGG | + | chr3_1:8277806-8277825 | None:intergenic | 35.0% | |
| GCTTGGTCTATTTCCATATT+TGG | + | chr3_1:8277949-8277968 | None:intergenic | 35.0% | |
| CCAAGCTGATGAACTTATAA+CGG | - | chr3_1:8277963-8277982 | Msa0347310:intron | 35.0% | |
| !!! | TTTTTTTTTTGTGGTTCCCG+AGG | - | chr3_1:8278083-8278102 | Msa0347310:intron | 35.0% |
| ! | TGAGCTTAGCTTAGTTGATA+TGG | + | chr3_1:8278144-8278163 | None:intergenic | 35.0% |
| !!! | ATATGTTTTGTTTAGCCCCA+TGG | - | chr3_1:8278434-8278453 | Msa0347310:intron | 35.0% |
| !!! | TTTTTTTACATACCGGCCAT+GGG | + | chr3_1:8278453-8278472 | None:intergenic | 35.0% |
| !!! | TTTTTTTTACATACCGGCCA+TGG | + | chr3_1:8278454-8278473 | None:intergenic | 35.0% |
| TTTCAGAGCAAAGATATGTC+TGG | + | chr3_1:8278588-8278607 | None:intergenic | 35.0% | |
| !! | TATCTTTGCTCTGAAAATGG+GGG | - | chr3_1:8278592-8278611 | Msa0347310:intron | 35.0% |
| ! | TTCTGGTTGGGAAACATTTA+GGG | - | chr3_1:8278648-8278667 | Msa0347310:intron | 35.0% |
| !!! | TTTTGGCTCATTTGTAGCTT+TGG | - | chr3_1:8278740-8278759 | Msa0347310:intron | 35.0% |
| GCTTACAAAGCTGTGAATTT+AGG | - | chr3_1:8277320-8277339 | Msa0347310:CDS | 35.0% | |
| AAGCTGTGAATTTAGGAAAC+TGG | - | chr3_1:8277327-8277346 | Msa0347310:CDS | 35.0% | |
| ! | CGACATATAATTTAAGACGG+AGG | - | chr3_1:8279529-8279548 | Msa0347310:intron | 35.0% |
| ! | ATGGCAAACTTTTTGTCCTA+CGG | + | chr3_1:8279684-8279703 | None:intergenic | 35.0% |
| TAGGACAAAAAGTTTGCCAT+GGG | - | chr3_1:8279684-8279703 | Msa0347310:intron | 35.0% | |
| TTATAAATTGGTCATGGGAC+TGG | + | chr3_1:8279765-8279784 | None:intergenic | 35.0% | |
| TGAAATGTTTCATGGTTGCT+AGG | + | chr3_1:8280208-8280227 | None:intergenic | 35.0% | |
| !! | GCTTTGATTCGAATTTTGAG+GGG | + | chr3_1:8280253-8280272 | None:intergenic | 35.0% |
| !! | CATCAAATGGTCTATTTTGG+CGG | - | chr3_1:8280272-8280291 | Msa0347310:intron | 35.0% |
| !!! | ATCAAATGGTCTATTTTGGC+GGG | - | chr3_1:8280273-8280292 | Msa0347310:intron | 35.0% |
| GATTATTGCACATAGCCAAT+TGG | - | chr3_1:8280534-8280553 | Msa0347310:intron | 35.0% | |
| ! | GATTTTACCATGGAAACTCA+TGG | - | chr3_1:8280583-8280602 | Msa0347310:intron | 35.0% |
| ! | TTTTTGACCATGAGTTTCCA+TGG | + | chr3_1:8280593-8280612 | None:intergenic | 35.0% |
| ATGGAAACTCATGGTCAAAA+AGG | - | chr3_1:8280592-8280611 | Msa0347310:intron | 35.0% | |
| TGAGTCTCACACTTAAGAAA+TGG | - | chr3_1:8280767-8280786 | Msa0347310:intron | 35.0% | |
| CCTTCACACATATATGATCA+AGG | + | chr3_1:8280935-8280954 | None:intergenic | 35.0% | |
| CCTTGATCATATATGTGTGA+AGG | - | chr3_1:8280932-8280951 | Msa0347310:intron | 35.0% | |
| CAGATTATCAAGGCACAAAT+TGG | - | chr3_1:8280979-8280998 | Msa0347310:intron | 35.0% | |
| TGCCATAACCATTAGTAAGT+TGG | + | chr3_1:8281064-8281083 | None:intergenic | 35.0% | |
| TTTCTTACTCGCATAACTTG+AGG | + | chr3_1:8281095-8281114 | None:intergenic | 35.0% | |
| ! | TTGAACTTTGTTTGCTTTGC+AGG | - | chr3_1:8281172-8281191 | Msa0347310:intron | 35.0% |
| !! | AAAATGGATTAGATGCTGTG+AGG | - | chr3_1:8281243-8281262 | Msa0347310:intron | 35.0% |
| ACTTGACAATGCTTTCACAT+GGG | - | chr3_1:8281337-8281356 | Msa0347310:intron | 35.0% | |
| ! | TTAGGGTTTGAAATTGAGAG+AGG | - | chr3_1:8281456-8281475 | Msa0347310:intron | 35.0% |
| TTGGAAACTTGAATTAAGGG+AGG | + | chr3_1:8281719-8281738 | None:intergenic | 35.0% | |
| AACAAGCTTAGGAACTTGAT+TGG | + | chr3_1:8281752-8281771 | None:intergenic | 35.0% | |
| TTGAAAGGTTCAACAAGCTT+AGG | + | chr3_1:8281763-8281782 | None:intergenic | 35.0% | |
| GGGATTTGAAGATTGTTCAT+TGG | + | chr3_1:8281832-8281851 | None:intergenic | 35.0% | |
| TAGGGAACAAGTAAACAAAG+GGG | + | chr3_1:8281852-8281871 | None:intergenic | 35.0% | |
| CTAGGGAACAAGTAAACAAA+GGG | + | chr3_1:8281853-8281872 | None:intergenic | 35.0% | |
| CTGATGCTAAAAGAAAGCTA+GGG | + | chr3_1:8281870-8281889 | None:intergenic | 35.0% | |
| GCTAAACATTTGAGAGTCTT+TGG | + | chr3_1:8281916-8281935 | None:intergenic | 35.0% | |
| CTGAATAAATATGGATGGGA+AGG | + | chr3_1:8281948-8281967 | None:intergenic | 35.0% | |
| CTTCCCATCCATATTTATTC+AGG | - | chr3_1:8281946-8281965 | Msa0347310:intron | 35.0% | |
| TTAGCTAATCCATTGTGTTG+TGG | - | chr3_1:8282108-8282127 | Msa0347310:intron | 35.0% | |
| ! | TGGTGGAGATTTTACTTCAA+AGG | + | chr3_1:8282192-8282211 | None:intergenic | 35.0% |
| !! | AAGATTTTGAGAACTGATGG+TGG | + | chr3_1:8282212-8282231 | None:intergenic | 35.0% |
| TTCTGATGTATATGGTCCAT+TGG | + | chr3_1:8282390-8282409 | None:intergenic | 35.0% | |
| !! | GTTGGTAATACTTGCTTGAT+AGG | + | chr3_1:8282482-8282501 | None:intergenic | 35.0% |
| CAAGTATTACCAACCTGATT+TGG | - | chr3_1:8282488-8282507 | Msa0347310:intron | 35.0% | |
| ! | TAAGTTGGATACACCAAATC+AGG | + | chr3_1:8282504-8282523 | None:intergenic | 35.0% |
| !! | TGATTTGGTGTATCCAACTT+AGG | - | chr3_1:8282503-8282522 | Msa0347310:intron | 35.0% |
| GAAAGGTTCTATTCTTTGCA+AGG | - | chr3_1:8282669-8282688 | Msa0347310:intron | 35.0% | |
| ATGGGAAAGATAGCTATTGA+AGG | + | chr3_1:8282860-8282879 | None:intergenic | 35.0% | |
| ! | TTAACTTTTGCATTCTTCCC+AGG | - | chr3_1:8282914-8282933 | Msa0347310:intron | 35.0% |
| GGTTATAGGAAATTGATCCT+GGG | + | chr3_1:8282934-8282953 | None:intergenic | 35.0% | |
| TGGTTATAGGAAATTGATCC+TGG | + | chr3_1:8282935-8282954 | None:intergenic | 35.0% | |
| AGAGATGCAATTCAGAAAGA+TGG | + | chr3_1:8283003-8283022 | None:intergenic | 35.0% | |
| TTCTGACACAGTTCAATTGA+TGG | + | chr3_1:8283044-8283063 | None:intergenic | 35.0% | |
| CTGAATGTTGGTATGGTAAA+GGG | + | chr3_1:8283120-8283139 | None:intergenic | 35.0% | |
| TCTGAATGTTGGTATGGTAA+AGG | + | chr3_1:8283121-8283140 | None:intergenic | 35.0% | |
| TATGCTTCTGAATGTTGGTA+TGG | + | chr3_1:8283127-8283146 | None:intergenic | 35.0% | |
| ! | AACTTGAAGTGCTTGTTGAA+TGG | - | chr3_1:8283348-8283367 | Msa0347310:intron | 35.0% |
| GTATCATGAAGGTGATGTTT+AGG | + | chr3_1:8283677-8283696 | None:intergenic | 35.0% | |
| !! | GTTCTTGAAAGGTATCATGA+AGG | + | chr3_1:8283688-8283707 | None:intergenic | 35.0% |
| AAAATCCACAAAGTCTAAGG+AGG | + | chr3_1:8283719-8283738 | None:intergenic | 35.0% | |
| CTCAAAATCCACAAAGTCTA+AGG | + | chr3_1:8283722-8283741 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | + | chr3_1:8283803-8283822 | None:intergenic | 35.0% | |
| CAAAACGGTTATGATGAGTT+GGG | + | chr3_1:8283868-8283887 | None:intergenic | 35.0% | |
| AAAATGGAAACTAGGGAAGA+TGG | + | chr3_1:8283942-8283961 | None:intergenic | 35.0% | |
| CATCTTCCAACACTTGAAAA+TGG | + | chr3_1:8283958-8283977 | None:intergenic | 35.0% | |
| TACCAAGCAATCAATTGAAG+CGG | - | chr3_1:8284050-8284069 | Msa0347310:intron | 35.0% | |
| TCTTTACAAAGAGATGTCAG+AGG | - | chr3_1:8284216-8284235 | Msa0347310:intron | 35.0% | |
| CTTTACAAAGAGATGTCAGA+GGG | - | chr3_1:8284217-8284236 | Msa0347310:intron | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr3_1:8284300-8284319 | None:intergenic | 35.0% | |
| ! | TCCTAATAGTGCTTTGTTCA+AGG | - | chr3_1:8284310-8284329 | Msa0347310:intron | 35.0% |
| ! | ACCTTGAACAAAGCACTATT+AGG | + | chr3_1:8284314-8284333 | None:intergenic | 35.0% |
| GGGTTTATAGAGAATTCTCT+TGG | + | chr3_1:8284370-8284389 | None:intergenic | 35.0% | |
| !! | TCATCACTGATTTGAAGTCA+AGG | + | chr3_1:8284689-8284708 | None:intergenic | 35.0% |
| CATTCATTTGGCAAATCATC+AGG | + | chr3_1:8284943-8284962 | None:intergenic | 35.0% | |
| ! | CTGATGATTTGCCAAATGAA+TGG | - | chr3_1:8284941-8284960 | Msa0347310:intron | 35.0% |
| AAGGTATGATTGGAGAAATG+GGG | + | chr3_1:8285010-8285029 | None:intergenic | 35.0% | |
| ! | GAAAGGTATGATTGGAGAAA+TGG | + | chr3_1:8285012-8285031 | None:intergenic | 35.0% |
| GACACTAGAAAATCTCTATC+AGG | + | chr3_1:8285161-8285180 | None:intergenic | 35.0% | |
| TATTTGAATGGGACTTTGAC+AGG | + | chr3_1:8285263-8285282 | None:intergenic | 35.0% | |
| ! | AAGTGTGATAAGTCGGTTTA+TGG | + | chr3_1:8285333-8285352 | None:intergenic | 35.0% |
| CTTATTGCATAGGATAAGTC+TGG | - | chr3_1:8285350-8285369 | Msa0347310:intron | 35.0% | |
| !! | CATCTTGCTTTTCTCTTCAT+CGG | - | chr3_1:8285433-8285452 | Msa0347310:intron | 35.0% |
| ! | AGAATAGCTCACCTTTGTTT+CGG | - | chr3_1:8285573-8285592 | Msa0347310:intron | 35.0% |
| ATTATAAGGGACCGAAACAA+AGG | + | chr3_1:8285587-8285606 | None:intergenic | 35.0% | |
| ! | GAATTTGAGATGAAGGATCT+TGG | + | chr3_1:8285638-8285657 | None:intergenic | 35.0% |
| GATGAGTTTCTTATAAAGGC+TGG | + | chr3_1:8285809-8285828 | None:intergenic | 35.0% | |
| ATCTATATGCAACAACCAGA+AGG | + | chr3_1:8285920-8285939 | None:intergenic | 35.0% | |
| !!! | CAATGAAATTTTTTCACCGG+TGG | + | chr3_1:8286053-8286072 | None:intergenic | 35.0% |
| ! | AGAAGAAAGAAGGTATACCA+GGG | + | chr3_1:8286144-8286163 | None:intergenic | 35.0% |
| ! | AAGAAGAAAGAAGGTATACC+AGG | + | chr3_1:8286145-8286164 | None:intergenic | 35.0% |
| ATGAAACAAGTTTCCAAGTC+TGG | - | chr3_1:8286206-8286225 | Msa0347310:intron | 35.0% | |
| TCAGCATAACCGTATCTATT+AGG | - | chr3_1:8286367-8286386 | Msa0347310:intron | 35.0% | |
| ! | AGTCAGGATCAATTGTTTCT+TGG | - | chr3_1:8286431-8286450 | Msa0347310:intron | 35.0% |
| AGAGAAAATTCAGTTTGAGG+TGG | + | chr3_1:8286518-8286537 | None:intergenic | 35.0% | |
| !! | ATTTTCATGGGTTATCCTGA+AGG | + | chr3_1:8286673-8286692 | None:intergenic | 35.0% |
| ! | GCTGTGAAGTGTATTTTCAT+GGG | + | chr3_1:8286685-8286704 | None:intergenic | 35.0% |
| ! | AGCTGTGAAGTGTATTTTCA+TGG | + | chr3_1:8286686-8286705 | None:intergenic | 35.0% |
| TTCAAATTAGAGTAGTCTGC+CGG | - | chr3_1:8286760-8286779 | Msa0347310:CDS | 35.0% | |
| TTAACAGATGTCCATCAACA+GGG | + | chr3_1:8286825-8286844 | None:intergenic | 35.0% | |
| ATTAACAGATGTCCATCAAC+AGG | + | chr3_1:8286826-8286845 | None:intergenic | 35.0% | |
| ! | AGCAGTTTAATGAGTTTTGC+AGG | + | chr3_1:8287014-8287033 | None:intergenic | 35.0% |
| !! | AAAGTGTTGAGAACTGACAA+TGG | + | chr3_1:8287054-8287073 | None:intergenic | 35.0% |
| AGCATCAGTTAAAACTCATG+GGG | + | chr3_1:8287214-8287233 | None:intergenic | 35.0% | |
| CAGCATCAGTTAAAACTCAT+GGG | + | chr3_1:8287215-8287234 | None:intergenic | 35.0% | |
| TATGTTCATTCGGATCTTTG+GGG | + | chr3_1:8287240-8287259 | None:intergenic | 35.0% | |
| GTATGTTCATTCGGATCTTT+GGG | + | chr3_1:8287241-8287260 | None:intergenic | 35.0% | |
| AGTATGTTCATTCGGATCTT+TGG | + | chr3_1:8287242-8287261 | None:intergenic | 35.0% | |
| TCCGAATGAACATACTCAAA+AGG | - | chr3_1:8287246-8287265 | Msa0347310:intron | 35.0% | |
| !! | GCCTTTTGAGTATGTTCATT+CGG | + | chr3_1:8287250-8287269 | None:intergenic | 35.0% |
| AACAACACAAGGTGAAGTTT+GGG | + | chr3_1:8287296-8287315 | None:intergenic | 35.0% | |
| AAACAACACAAGGTGAAGTT+TGG | + | chr3_1:8287297-8287316 | None:intergenic | 35.0% | |
| !! | TAGCTAAACAAGGTTTGCTA+GGG | + | chr3_1:8287368-8287387 | None:intergenic | 35.0% |
| TTAGTTGAGCTAGCTAAACA+AGG | + | chr3_1:8287378-8287397 | None:intergenic | 35.0% | |
| TAACTAAACTGTGGCATTTG+AGG | + | chr3_1:8287425-8287444 | None:intergenic | 35.0% | |
| TTAGATGGTTCCACTGTTAT+AGG | + | chr3_1:8287483-8287502 | None:intergenic | 35.0% | |
| ! | GCTAAAGGGTCTAAAATACA+TGG | + | chr3_1:8287516-8287535 | None:intergenic | 35.0% |
| GGTGCATTAGTTATAGCTAA+AGG | + | chr3_1:8287531-8287550 | None:intergenic | 35.0% | |
| GGTATGATGAGAATTTCTCA+TGG | + | chr3_1:8287552-8287571 | None:intergenic | 35.0% | |
| ! | ATAAGCATGTTTGATGGTCT+AGG | + | chr3_1:8287597-8287616 | None:intergenic | 35.0% |
| TATACCTCACATCCTTCAAA+AGG | - | chr3_1:8287646-8287665 | Msa0347310:intron | 35.0% | |
| !! | ATTTCCTTTTGAAGGATGTG+AGG | + | chr3_1:8287653-8287672 | None:intergenic | 35.0% |
| CATCCTTCAAAAGGAAATCA+CGG | - | chr3_1:8287655-8287674 | Msa0347310:intron | 35.0% | |
| !! | GGTCATCAAACATTTTGAGA+CGG | - | chr3_1:8287676-8287695 | Msa0347310:intron | 35.0% |
| GCTTGCAAAATTCAAGGTAT+GGG | + | chr3_1:8287708-8287727 | None:intergenic | 35.0% | |
| ! | GTTTCAAAGTACTCCTTTCT+CGG | - | chr3_1:8287774-8287793 | Msa0347310:CDS | 35.0% |
| TCACTTCAAGAAAGATTGTC+CGG | + | chr3_1:8287946-8287965 | None:intergenic | 35.0% | |
| AGATCAAAGTCTAGGTCAAA+GGG | + | chr3_1:8288017-8288036 | None:intergenic | 35.0% | |
| AGAATTCCAGATCAAAGTCT+AGG | + | chr3_1:8288025-8288044 | None:intergenic | 35.0% | |
| AGAAGTGAAAACAGAGGAAA+GGG | + | chr3_1:8288056-8288075 | None:intergenic | 35.0% | |
| AACCTTCAACTCTTTGAACT+TGG | - | chr3_1:8288112-8288131 | Msa0347310:CDS | 35.0% | |
| AACCAAGTTCAAAGAGTTGA+AGG | + | chr3_1:8288117-8288136 | None:intergenic | 35.0% | |
| ACAATGCTTTATGGCAAAGA+AGG | + | chr3_1:8288188-8288207 | None:intergenic | 35.0% | |
| !! | ACAACTCTACTTTTACCGAA+TGG | + | chr3_1:8288357-8288376 | None:intergenic | 35.0% |
| !! | AAGTGTGTTGAAGCATTGAA+GGG | + | chr3_1:8288578-8288597 | None:intergenic | 35.0% |
| !! | AAAGTGTGTTGAAGCATTGA+AGG | + | chr3_1:8288579-8288598 | None:intergenic | 35.0% |
| TTATCGGTAGTAACGACTTT+GGG | + | chr3_1:8288640-8288659 | None:intergenic | 35.0% | |
| TTTATCGGTAGTAACGACTT+TGG | + | chr3_1:8288641-8288660 | None:intergenic | 35.0% | |
| CAAAGGTCAAATCAATAACC+AGG | + | chr3_1:8288695-8288714 | None:intergenic | 35.0% | |
| TACCAAGCAATCAATTGAAG+CGG | - | chr3_1:8284050-8284069 | Msa0347310:intron | 35.0% | |
| TCTTTACAAAGAGATGTCAG+AGG | - | chr3_1:8284216-8284235 | Msa0347310:intron | 35.0% | |
| CTTTACAAAGAGATGTCAGA+GGG | - | chr3_1:8284217-8284236 | Msa0347310:intron | 35.0% | |
| !!! | TGGGATTTTTGGGTAGAATT+AGG | + | chr3_1:8289008-8289027 | None:intergenic | 35.0% |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr3_1:8284300-8284319 | None:intergenic | 35.0% | |
| ! | TCCTAATAGTGCTTTGTTCA+AGG | - | chr3_1:8284310-8284329 | Msa0347310:intron | 35.0% |
| ! | ACCTTGAACAAAGCACTATT+AGG | + | chr3_1:8284314-8284333 | None:intergenic | 35.0% |
| GGGTTTATAGAGAATTCTCT+TGG | + | chr3_1:8284370-8284389 | None:intergenic | 35.0% | |
| GGTATAATATATACCCCAAC+AGG | - | chr3_1:8281656-8281675 | Msa0347310:intron | 35.0% | |
| GTACATAATTCAAATCCGCT+CGG | + | chr3_1:8289986-8290005 | None:intergenic | 35.0% | |
| !!! | CAAAATGGTTTTGAGCATAG+TGG | - | chr3_1:8290087-8290106 | Msa0347310:intron | 35.0% |
| CAAGAGATGGATATACAGAA+TGG | - | chr3_1:8290112-8290131 | Msa0347310:intron | 35.0% | |
| AGAGATGGATATACAGAATG+GGG | - | chr3_1:8290114-8290133 | Msa0347310:intron | 35.0% | |
| CTTATTGAGTGAAATCCATG+TGG | + | chr3_1:8290352-8290371 | None:intergenic | 35.0% | |
| GATTTCACTCAATAAGAGAG+TGG | - | chr3_1:8290356-8290375 | Msa0347310:intron | 35.0% | |
| ATAGCCTGAAGAACTATTAC+AGG | - | chr3_1:8290606-8290625 | Msa0347310:intron | 35.0% | |
| TAGCCTGAAGAACTATTACA+GGG | - | chr3_1:8290607-8290626 | Msa0347310:intron | 35.0% | |
| TGTGATCATGTCAAATCCAT+TGG | - | chr3_1:8290670-8290689 | Msa0347310:CDS | 35.0% | |
| ! | GAGAAGAAGTTTAGAATCTG+TGG | + | chr3_1:8290696-8290715 | None:intergenic | 35.0% |
| CTTCTTCTCTCATTTGTCAA+AGG | - | chr3_1:8290707-8290726 | Msa0347310:CDS | 35.0% | |
| ! | TATCTTTGGTAGTCTTGCAT+AGG | + | chr3_1:8291029-8291048 | None:intergenic | 35.0% |
| AATACACATCCATTTGTGCT+TGG | + | chr3_1:8291055-8291074 | None:intergenic | 35.0% | |
| GTGTATTCTCATGCAACATT+TGG | - | chr3_1:8291068-8291087 | Msa0347310:intron | 35.0% | |
| ATTCTCATGCAACATTTGGA+TGG | - | chr3_1:8291072-8291091 | Msa0347310:intron | 35.0% | |
| TTCTCATGCAACATTTGGAT+GGG | - | chr3_1:8291073-8291092 | Msa0347310:intron | 35.0% | |
| ! | AACATTTGGATGGGCTTATT+GGG | - | chr3_1:8291082-8291101 | Msa0347310:intron | 35.0% |
| GGATACAACAAAGGATGCAT+AGG | - | chr3_1:8276978-8276997 | Msa0347310:CDS | 40.0% | |
| !! | AGCCAGGTTTTATAAATCGG+GGG | + | chr3_1:8277037-8277056 | None:intergenic | 40.0% |
| !! | GAGCCAGGTTTTATAAATCG+GGG | + | chr3_1:8277038-8277057 | None:intergenic | 40.0% |
| !! | GGAGCCAGGTTTTATAAATC+GGG | + | chr3_1:8277039-8277058 | None:intergenic | 40.0% |
| !! | CGGAGCCAGGTTTTATAAAT+CGG | + | chr3_1:8277040-8277059 | None:intergenic | 40.0% |
| CTTATTTCCGTGTGTCAAGA+TGG | + | chr3_1:8277111-8277130 | None:intergenic | 40.0% | |
| ! | TATATAGTGCCCTTGGTGAT+AGG | - | chr3_1:8277203-8277222 | Msa0347310:intron | 40.0% |
| ! | ATATAGTGCCCTTGGTGATA+GGG | - | chr3_1:8277204-8277223 | Msa0347310:CDS | 40.0% |
| TAAGCAAACGAAAGAGAGTG+AGG | + | chr3_1:8277305-8277324 | None:intergenic | 40.0% | |
| ! | TGTTAAGAGCTCAGTTGGTA+CGG | - | chr3_1:8277674-8277693 | Msa0347310:intron | 40.0% |
| GCATAATATATGTAAGGCCC+AGG | - | chr3_1:8277702-8277721 | Msa0347310:intron | 40.0% | |
| CAAGGGAAAATGATGATAGG+TGG | - | chr3_1:8277748-8277767 | Msa0347310:intron | 40.0% | |
| AGATACAAATTCTCCCACCA+CGG | - | chr3_1:8277786-8277805 | Msa0347310:intron | 40.0% | |
| AAAAATCAATTGGCCGTGGT+GGG | + | chr3_1:8277802-8277821 | None:intergenic | 40.0% | |
| AAAAAATCAATTGGCCGTGG+TGG | + | chr3_1:8277803-8277822 | None:intergenic | 40.0% | |
| CCGTTATAAGTTCATCAGCT+TGG | + | chr3_1:8277966-8277985 | None:intergenic | 40.0% | |
| TTGGACAAAAAGTTTGCCCA+TGG | - | chr3_1:8278380-8278399 | Msa0347310:intron | 40.0% | |
| TGGACAAAAAGTTTGCCCAT+GGG | - | chr3_1:8278381-8278400 | Msa0347310:intron | 40.0% | |
| TTGTCTCTCACTAAACCCAT+GGG | + | chr3_1:8278399-8278418 | None:intergenic | 40.0% | |
| TTTGTCTCTCACTAAACCCA+TGG | + | chr3_1:8278400-8278419 | None:intergenic | 40.0% | |
| !!! | TTTTTTACATACCGGCCATG+GGG | + | chr3_1:8278452-8278471 | None:intergenic | 40.0% |
| CTAAATGTTTCCCAACCAGA+AGG | + | chr3_1:8278649-8278668 | None:intergenic | 40.0% | |
| ! | CTTCTGGTTGGGAAACATTT+AGG | - | chr3_1:8278647-8278666 | Msa0347310:intron | 40.0% |
| !! | TTTTTCGAATGATCCTGCGT+TGG | + | chr3_1:8278812-8278831 | None:intergenic | 40.0% |
| ACGCAGGATCATTCGAAAAA+TGG | - | chr3_1:8278812-8278831 | Msa0347310:intron | 40.0% | |
| TAAGCAAACGAAAGAGAGTG+AGG | + | chr3_1:8277305-8277324 | None:intergenic | 40.0% | |
| AACTACTTTGTCCCCTCTAA+AGG | + | chr3_1:8279263-8279282 | None:intergenic | 40.0% | |
| GTAGGACAAAAAGTTTGCCA+TGG | - | chr3_1:8279683-8279702 | Msa0347310:intron | 40.0% | |
| TTTGTCTCTCACTAAACCCA+TGG | + | chr3_1:8278400-8278419 | None:intergenic | 40.0% | |
| ACATATCTTTCCGCTGAAGA+TGG | - | chr3_1:8279915-8279934 | Msa0347310:intron | 40.0% | |
| CATATCTTTCCGCTGAAGAT+GGG | - | chr3_1:8279916-8279935 | Msa0347310:intron | 40.0% | |
| ATATCTTTCCGCTGAAGATG+GGG | - | chr3_1:8279917-8279936 | Msa0347310:intron | 40.0% | |
| ! | TTCTGGTTGGGAAACATTCA+GGG | - | chr3_1:8279974-8279993 | Msa0347310:intron | 40.0% |
| !! | TATTGGCTCATTTGCAGCTT+TGG | - | chr3_1:8280089-8280108 | Msa0347310:intron | 40.0% |
| AACAAGAAATTTGTGGGGCA+AGG | - | chr3_1:8280148-8280167 | Msa0347310:intron | 40.0% | |
| GGTCAAAAAGGTCAAACCAA+CGG | - | chr3_1:8280604-8280623 | Msa0347310:intron | 40.0% | |
| GTCAAAAAGGTCAAACCAAC+GGG | - | chr3_1:8280605-8280624 | Msa0347310:intron | 40.0% | |
| TCAGTGACTGCAGATTATCA+AGG | - | chr3_1:8280969-8280988 | Msa0347310:intron | 40.0% | |
| TTGGGATGACAATGATCCAT+CGG | - | chr3_1:8280998-8281017 | Msa0347310:intron | 40.0% | |
| !! | GGAGAGTACCAACTTACTAA+TGG | - | chr3_1:8281053-8281072 | Msa0347310:intron | 40.0% |
| ! | TTTAGGTGGGTTTGGATCTT+GGG | + | chr3_1:8281291-8281310 | None:intergenic | 40.0% |
| ! | ACAAAAGGTTTAGGTGGGTT+TGG | + | chr3_1:8281299-8281318 | None:intergenic | 40.0% |
| ! | AACCCACCTAAACCTTTTGT+TGG | - | chr3_1:8281299-8281318 | Msa0347310:intron | 40.0% |
| ! | ACCCACCTAAACCTTTTGTT+GGG | - | chr3_1:8281300-8281319 | Msa0347310:intron | 40.0% |
| CACTTGACAATGCTTTCACA+TGG | - | chr3_1:8281336-8281355 | Msa0347310:intron | 40.0% | |
| ! | GGTTTGAAATTGAGAGAGGA+AGG | - | chr3_1:8281460-8281479 | Msa0347310:intron | 40.0% |
| ! | GCTTGCTGACATATTCACTA+AGG | + | chr3_1:8281795-8281814 | None:intergenic | 40.0% |
| GCTAGGGAACAAGTAAACAA+AGG | + | chr3_1:8281854-8281873 | None:intergenic | 40.0% | |
| CCTGATGCTAAAAGAAAGCT+AGG | + | chr3_1:8281871-8281890 | None:intergenic | 40.0% | |
| !! | CCTAGCTTTCTTTTAGCATC+AGG | - | chr3_1:8281868-8281887 | Msa0347310:intron | 40.0% |
| AGGAATGTGCTTGTAGAACA+AGG | - | chr3_1:8281888-8281907 | Msa0347310:intron | 40.0% | |
| AGAACATTGTTTGACAGGAC+CGG | + | chr3_1:8282078-8282097 | None:intergenic | 40.0% | |
| ACATGTACTCCACAACACAA+TGG | + | chr3_1:8282120-8282139 | None:intergenic | 40.0% | |
| !!! | ATTTTGAGAACTGATGGTGG+TGG | + | chr3_1:8282209-8282228 | None:intergenic | 40.0% |
| CCATTGGAGGTTTCTTCTTT+CGG | + | chr3_1:8282374-8282393 | None:intergenic | 40.0% | |
| TGATGTATATGGTCCATTGG+AGG | + | chr3_1:8282387-8282406 | None:intergenic | 40.0% | |
| TTGGATACACCAAATCAGGT+TGG | + | chr3_1:8282500-8282519 | None:intergenic | 40.0% | |
| !!! | GATTTTGGGAGTACCTAAGT+TGG | + | chr3_1:8282519-8282538 | None:intergenic | 40.0% |
| TGGCTATGACACTATAGGTT+TGG | + | chr3_1:8282587-8282606 | None:intergenic | 40.0% | |
| GTAGATGGCTATGACACTAT+AGG | + | chr3_1:8282592-8282611 | None:intergenic | 40.0% | |
| ! | TCTTTGCAAGGGAAGTTTTC+AGG | - | chr3_1:8282681-8282700 | Msa0347310:intron | 40.0% |
| GTTGGTCAATTAGTGCAGAA+GGG | + | chr3_1:8282767-8282786 | None:intergenic | 40.0% | |
| TGTTGGTCAATTAGTGCAGA+AGG | + | chr3_1:8282768-8282787 | None:intergenic | 40.0% | |
| CCAACAGTTAGAAAGTTGCA+CGG | - | chr3_1:8282782-8282801 | Msa0347310:intron | 40.0% | |
| ! | ACACTAGTTGCAGAAGGTAT+GGG | + | chr3_1:8282878-8282897 | None:intergenic | 40.0% |
| AACACTAGTTGCAGAAGGTA+TGG | + | chr3_1:8282879-8282898 | None:intergenic | 40.0% | |
| CATAGAACACTAGTTGCAGA+AGG | + | chr3_1:8282884-8282903 | None:intergenic | 40.0% | |
| ! | AGAACAAGCTAAACTTGCTC+AGG | + | chr3_1:8283077-8283096 | None:intergenic | 40.0% |
| GTCACTATGCTTCTGAATGT+TGG | + | chr3_1:8283132-8283151 | None:intergenic | 40.0% | |
| ! | ATAACTCTAAGGGAGGATAC+TGG | + | chr3_1:8283276-8283295 | None:intergenic | 40.0% |
| ! | GGAAAGAATAACTCTAAGGG+AGG | + | chr3_1:8283283-8283302 | None:intergenic | 40.0% |
| TTTGGAAGCTCATGAACTGA+TGG | + | chr3_1:8283398-8283417 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGGACTACA+AGG | + | chr3_1:8283794-8283813 | None:intergenic | 40.0% | |
| GCAAAACGGTTATGATGAGT+TGG | + | chr3_1:8283869-8283888 | None:intergenic | 40.0% | |
| GTTTGTGGCACAAGATTTGT+TGG | + | chr3_1:8283899-8283918 | None:intergenic | 40.0% | |
| ATCCGCTTCAATTGATTGCT+TGG | + | chr3_1:8284055-8284074 | None:intergenic | 40.0% | |
| GAGAATCTGTTTACCCAGTT+CGG | - | chr3_1:8284131-8284150 | Msa0347310:intron | 40.0% | |
| GTCTAATGATGACCTACTCT+GGG | - | chr3_1:8284153-8284172 | Msa0347310:intron | 40.0% | |
| TCTAATGATGACCTACTCTG+GGG | - | chr3_1:8284154-8284173 | Msa0347310:intron | 40.0% | |
| !! | CTGGGATTTTGGGTAGAATT+AGG | + | chr3_1:8284264-8284283 | None:intergenic | 40.0% |
| TTCTCTTGGCAACAACACTA+GGG | + | chr3_1:8284356-8284375 | None:intergenic | 40.0% | |
| ATTCTCTTGGCAACAACACT+AGG | + | chr3_1:8284357-8284376 | None:intergenic | 40.0% | |
| !! | TCACTGATTTGAAGTCAAGG+TGG | + | chr3_1:8284686-8284705 | None:intergenic | 40.0% |
| TTGCCAAATGAATGGCACTT+TGG | - | chr3_1:8284949-8284968 | Msa0347310:intron | 40.0% | |
| ! | TAGCCAAAGTGCCATTCATT+TGG | + | chr3_1:8284955-8284974 | None:intergenic | 40.0% |
| !! | GAGAAATGGGGATTAGTCAA+GGG | + | chr3_1:8284998-8285017 | None:intergenic | 40.0% |
| AAGGAAGCCATATGGTTGAA+AGG | + | chr3_1:8285029-8285048 | None:intergenic | 40.0% | |
| TTCCTTGACCCTTTCAACAA+GGG | - | chr3_1:8285043-8285062 | Msa0347310:intron | 40.0% | |
| GTACATAGCCCTTGTTGAAA+GGG | + | chr3_1:8285054-8285073 | None:intergenic | 40.0% | |
| AGTACATAGCCCTTGTTGAA+AGG | + | chr3_1:8285055-8285074 | None:intergenic | 40.0% | |
| GTTTACTTTGTTCGGTACAG+CGG | + | chr3_1:8285132-8285151 | None:intergenic | 40.0% | |
| TTTGGAAGGATATGTGGATG+CGG | + | chr3_1:8285201-8285220 | None:intergenic | 40.0% | |
| ! | AAGTCGGTTTATGGCAAATC+CGG | + | chr3_1:8285324-8285343 | None:intergenic | 40.0% |
| !! | TGGAAGCATCATGTATGGTA+TGG | + | chr3_1:8285387-8285406 | None:intergenic | 40.0% |
| GAAGAGAAAAGCAAGATGGA+GGG | + | chr3_1:8285431-8285450 | None:intergenic | 40.0% | |
| TGAAGAGAAAAGCAAGATGG+AGG | + | chr3_1:8285432-8285451 | None:intergenic | 40.0% | |
| CGATGAAGAGAAAAGCAAGA+TGG | + | chr3_1:8285435-8285454 | None:intergenic | 40.0% | |
| ! | CTTTTCTCTTCATCGGATTG+AGG | - | chr3_1:8285440-8285459 | Msa0347310:intron | 40.0% |
| AACTTTGTGTGATGACCAAG+AGG | - | chr3_1:8285479-8285498 | Msa0347310:intron | 40.0% | |
| TATCTCAGCAAGGTTACTTG+AGG | + | chr3_1:8285553-8285572 | None:intergenic | 40.0% | |
| GAGCTATTCTTATCTCAGCA+AGG | + | chr3_1:8285563-8285582 | None:intergenic | 40.0% | |
| TGCAAAGAGGATACTTGGTA+TGG | + | chr3_1:8285612-8285631 | None:intergenic | 40.0% | |
| GGTAATGCAAAGAGGATACT+TGG | + | chr3_1:8285617-8285636 | None:intergenic | 40.0% | |
| !! | AGGATCTTGGTAATGCAAAG+AGG | + | chr3_1:8285625-8285644 | None:intergenic | 40.0% |
| GTTGTGTGTACATGATGAGA+AGG | + | chr3_1:8285763-8285782 | None:intergenic | 40.0% | |
| ! | TTTTCTTCCACGAAACCTTC+TGG | - | chr3_1:8285902-8285921 | Msa0347310:intron | 40.0% |
| CAACTCTCCATGTAGAAATG+CGG | - | chr3_1:8285949-8285968 | Msa0347310:intron | 40.0% | |
| ! | TGTAGCAAAGGGTTTTACTC+AGG | + | chr3_1:8286092-8286111 | None:intergenic | 40.0% |
| AAGGCAAGACTTGTAGCAAA+GGG | + | chr3_1:8286103-8286122 | None:intergenic | 40.0% | |
| TAAGGCAAGACTTGTAGCAA+AGG | + | chr3_1:8286104-8286123 | None:intergenic | 40.0% | |
| ACAAGTCTTGCCTTATACCT+TGG | - | chr3_1:8286109-8286128 | Msa0347310:intron | 40.0% | |
| ! | GAAGAAAGAAGGTATACCAG+GGG | + | chr3_1:8286143-8286162 | None:intergenic | 40.0% |
| TGGGTGTTCAAGAAGAAAGA+AGG | + | chr3_1:8286154-8286173 | None:intergenic | 40.0% | |
| CCTAAGAATCAAAGGGTAGT+GGG | + | chr3_1:8286184-8286203 | None:intergenic | 40.0% | |
| ACCTAAGAATCAAAGGGTAG+TGG | + | chr3_1:8286185-8286204 | None:intergenic | 40.0% | |
| CATTGGAAAAGAACCAGACT+TGG | + | chr3_1:8286222-8286241 | None:intergenic | 40.0% | |
| AAAGCAATGAAAGCAAGGAC+TGG | + | chr3_1:8286273-8286292 | None:intergenic | 40.0% | |
| AATGCTTCCCTGAAGTTCTT+TGG | - | chr3_1:8286295-8286314 | Msa0347310:intron | 40.0% | |
| AGCTGAAGAATTGCAAGACT+CGG | + | chr3_1:8286323-8286342 | None:intergenic | 40.0% | |
| GCATAACCGTATCTATTAGG+TGG | - | chr3_1:8286370-8286389 | Msa0347310:intron | 40.0% | |
| ACTATCAGCTAGCAAGAGAT+AGG | + | chr3_1:8286414-8286433 | None:intergenic | 40.0% | |
| AGGTTACAAACTGTGGAAGA+TGG | + | chr3_1:8286644-8286663 | None:intergenic | 40.0% | |
| GTGTGAAAGGTTACAAACTG+TGG | + | chr3_1:8286651-8286670 | None:intergenic | 40.0% | |
| TTGTAACCTTTCACACCTTC+AGG | - | chr3_1:8286655-8286674 | Msa0347310:intron | 40.0% | |
| GATAGATCTCAAGACACCTA+TGG | + | chr3_1:8286803-8286822 | None:intergenic | 40.0% | |
| TTGAGATCTATCCCTGTTGA+TGG | - | chr3_1:8286811-8286830 | Msa0347310:CDS | 40.0% | |
| TGGATTGTCCAAGAGTTTCT+GGG | + | chr3_1:8286878-8286897 | None:intergenic | 40.0% | |
| AAGAATGAACAGGACCTTGT+TGG | + | chr3_1:8286929-8286948 | None:intergenic | 40.0% | |
| GTCTTGCTGAAAGAATGAAC+AGG | + | chr3_1:8286939-8286958 | None:intergenic | 40.0% | |
| TTTGCAGGAAACGAGGTATA+AGG | + | chr3_1:8286999-8287018 | None:intergenic | 40.0% | |
| ! | AATGAGTTTTGCAGGAAACG+AGG | + | chr3_1:8287006-8287025 | None:intergenic | 40.0% |
| GCATCAGTTAAAACTCATGG+GGG | + | chr3_1:8287213-8287232 | None:intergenic | 40.0% | |
| CCAGCATCAGTTAAAACTCA+TGG | + | chr3_1:8287216-8287235 | None:intergenic | 40.0% | |
| !!! | CCATGAGTTTTAACTGATGC+TGG | - | chr3_1:8287213-8287232 | Msa0347310:intron | 40.0% |
| TGGGTGTGCATAAATCTAGT+AGG | + | chr3_1:8287272-8287291 | None:intergenic | 40.0% | |
| ACAACACAAGGTGAAGTTTG+GGG | + | chr3_1:8287295-8287314 | None:intergenic | 40.0% | |
| CACATTAGGCAAACAACACA+AGG | + | chr3_1:8287307-8287326 | None:intergenic | 40.0% | |
| ! | CTAGCTAAACAAGGTTTGCT+AGG | + | chr3_1:8287369-8287388 | None:intergenic | 40.0% |
| ! | AAACTGTGGCATTTGAGGTT+AGG | + | chr3_1:8287420-8287439 | None:intergenic | 40.0% |
| CTCTGGACATAACTAAACTG+TGG | + | chr3_1:8287434-8287453 | None:intergenic | 40.0% | |
| CACTGTTATAGGTCATGCAT+CGG | + | chr3_1:8287472-8287491 | None:intergenic | 40.0% | |
| ! | TGACCGTGATTTCCTTTTGA+AGG | + | chr3_1:8287661-8287680 | None:intergenic | 40.0% |
| GGCTTGCAAAATTCAAGGTA+TGG | + | chr3_1:8287709-8287728 | None:intergenic | 40.0% | |
| !! | TGCAAGCCTTATTGTTACCA+AGG | - | chr3_1:8287721-8287740 | Msa0347310:intron | 40.0% |
| ! | TGTTCGCCTTGGTAACAATA+AGG | + | chr3_1:8287730-8287749 | None:intergenic | 40.0% |
| !! | GAAACTTTGGAGCTGAAAGA+AGG | + | chr3_1:8287759-8287778 | None:intergenic | 40.0% |
| TTATCACATCTGTCCGAGAA+AGG | + | chr3_1:8287790-8287809 | None:intergenic | 40.0% | |
| ! | ACAAGTTGGGAACCTGAAAA+GGG | + | chr3_1:8287837-8287856 | None:intergenic | 40.0% |
| AGCACTAACTGTGACAAGTT+GGG | + | chr3_1:8287850-8287869 | None:intergenic | 40.0% | |
| CTCTTCACTTGCAATCTGAA+CGG | - | chr3_1:8287890-8287909 | Msa0347310:CDS | 40.0% | |
| AAAGATTGTCCGGAGAGAAA+GGG | + | chr3_1:8287936-8287955 | None:intergenic | 40.0% | |
| CAGATCAAAGTCTAGGTCAA+AGG | + | chr3_1:8288018-8288037 | None:intergenic | 40.0% | |
| CTTTGACCTAGACTTTGATC+TGG | - | chr3_1:8288016-8288035 | Msa0347310:intron | 40.0% | |
| GAAGTGAAAACAGAGGAAAG+GGG | + | chr3_1:8288055-8288074 | None:intergenic | 40.0% | |
| GAGAAGTGAAAACAGAGGAA+AGG | + | chr3_1:8288057-8288076 | None:intergenic | 40.0% | |
| AGAAGGCTTGAATGTCTCAA+GGG | + | chr3_1:8288081-8288100 | None:intergenic | 40.0% | |
| !! | AAGGTTGATGATAGTGGAGA+AGG | + | chr3_1:8288098-8288117 | None:intergenic | 40.0% |
| !! | GAGTTGAAGGTTGATGATAG+TGG | + | chr3_1:8288104-8288123 | None:intergenic | 40.0% |
| !! | CAAAGAAGGCACTATCACTT+TGG | + | chr3_1:8288174-8288193 | None:intergenic | 40.0% |
| ACTTAGGTAAAGCACACAGT+AGG | - | chr3_1:8288228-8288247 | Msa0347310:intron | 40.0% | |
| TAAAGCACACAGTAGGTGTA+AGG | - | chr3_1:8288235-8288254 | Msa0347310:intron | 40.0% | |
| AGATGTAAACCTGGATGATG+AGG | + | chr3_1:8288267-8288286 | None:intergenic | 40.0% | |
| ! | ACCTATAATGGAGCAACTGA+CGG | + | chr3_1:8288324-8288343 | None:intergenic | 40.0% |
| GGTGGAGTCAAAACCTATAA+TGG | + | chr3_1:8288336-8288355 | None:intergenic | 40.0% | |
| !!! | TAGGTTTTGACTCCACCATT+CGG | - | chr3_1:8288339-8288358 | Msa0347310:intron | 40.0% |
| !! | ACTCTACTTTTACCGAATGG+TGG | + | chr3_1:8288354-8288373 | None:intergenic | 40.0% |
| ATTGTACATGACCAAGTCCT+TGG | + | chr3_1:8288402-8288421 | None:intergenic | 40.0% | |
| TGCTATCATTCTGTGTCTTG+GGG | + | chr3_1:8288489-8288508 | None:intergenic | 40.0% | |
| GTGCTATCATTCTGTGTCTT+GGG | + | chr3_1:8288490-8288509 | None:intergenic | 40.0% | |
| AGTGCTATCATTCTGTGTCT+TGG | + | chr3_1:8288491-8288510 | None:intergenic | 40.0% | |
| GTTGTGGAAGGTAAAGATGA+GGG | + | chr3_1:8288618-8288637 | None:intergenic | 40.0% | |
| ATCCGCTTCAATTGATTGCT+TGG | + | chr3_1:8284055-8284074 | None:intergenic | 40.0% | |
| GTCTAATGATGACCTACTCT+GGG | - | chr3_1:8284153-8284172 | Msa0347310:intron | 40.0% | |
| TCTAATGATGACCTACTCTG+GGG | - | chr3_1:8284154-8284173 | Msa0347310:intron | 40.0% | |
| TTCTCTTGGCAACAACACTA+GGG | + | chr3_1:8284356-8284375 | None:intergenic | 40.0% | |
| ATTCTCTTGGCAACAACACT+AGG | + | chr3_1:8284357-8284376 | None:intergenic | 40.0% | |
| GCATTGTTGCGCTATCAAAT+CGG | + | chr3_1:8289534-8289553 | None:intergenic | 40.0% | |
| TTACTACAATAGTCACCGAG+CGG | - | chr3_1:8289968-8289987 | Msa0347310:intron | 40.0% | |
| GCAGTTGAAGGTTCTCAAAA+TGG | - | chr3_1:8290072-8290091 | Msa0347310:intron | 40.0% | |
| TGTTCCTAGCATTCTGTCTA+AGG | + | chr3_1:8290409-8290428 | None:intergenic | 40.0% | |
| CTATCTAGATTGACACCTAG+TGG | + | chr3_1:8290590-8290609 | None:intergenic | 40.0% | |
| CTTCCCTGTAATAGTTCTTC+AGG | + | chr3_1:8290613-8290632 | None:intergenic | 40.0% | |
| ! | AGTTTAGAATCTGTGGCCAA+TGG | + | chr3_1:8290689-8290708 | None:intergenic | 40.0% |
| ACATAAGAAATGACAGAGCC+TGG | - | chr3_1:8290816-8290835 | Msa0347310:CDS | 40.0% | |
| CATAAGAAATGACAGAGCCT+GGG | - | chr3_1:8290817-8290836 | Msa0347310:CDS | 40.0% | |
| ! | TTCTATTGTTGGTAGGGGAA+TGG | - | chr3_1:8290976-8290995 | Msa0347310:intron | 40.0% |
| ACTGCTGAATGGAACATACA+AGG | - | chr3_1:8290999-8291018 | Msa0347310:intron | 40.0% | |
| ! | CAACATTTGGATGGGCTTAT+TGG | - | chr3_1:8291081-8291100 | Msa0347310:intron | 40.0% |
| ATAACCATTGGAGTCTCAAG+TGG | - | chr3_1:8291120-8291139 | Msa0347310:CDS | 40.0% | |
| TCCCCCCGATTTATAAAACC+TGG | - | chr3_1:8277032-8277051 | Msa0347310:CDS | 45.0% | |
| !! | GCCAGGTTTTATAAATCGGG+GGG | + | chr3_1:8277036-8277055 | None:intergenic | 45.0% |
| TAGGCATCCATCTTGACACA+CGG | - | chr3_1:8277101-8277120 | Msa0347310:intron | 45.0% | |
| GAGGCTATATATAGTGCCCT+TGG | - | chr3_1:8277196-8277215 | Msa0347310:intron | 45.0% | |
| ! | TATAGTGCCCTTGGTGATAG+GGG | - | chr3_1:8277205-8277224 | Msa0347310:CDS | 45.0% |
| ACAATTCCGTCAAAGCGAGA+AGG | + | chr3_1:8277377-8277396 | None:intergenic | 45.0% | |
| ! | AAGGTTTGGGGTTCAAACCT+CGG | + | chr3_1:8278103-8278122 | None:intergenic | 45.0% |
| TCAACTAAGCTAAGCTCACG+AGG | - | chr3_1:8278146-8278165 | Msa0347310:intron | 45.0% | |
| !! | CAAGGGCACCCTAAAATTGA+AGG | + | chr3_1:8278782-8278801 | None:intergenic | 45.0% |
| !!! | CTTCAATTTTAGGGTGCCCT+TGG | - | chr3_1:8278780-8278799 | Msa0347310:intron | 45.0% |
| ATGGAACCTTCTCGCTTTGA+CGG | - | chr3_1:8278951-8278970 | Msa0347310:intron | 45.0% | |
| ACAATTCCGTCAAAGCGAGA+AGG | + | chr3_1:8277377-8277396 | None:intergenic | 45.0% | |
| CTTCAGCGGAAAGATATGTC+TGG | + | chr3_1:8279914-8279933 | None:intergenic | 45.0% | |
| TATCTTTCCGCTGAAGATGG+GGG | - | chr3_1:8279918-8279937 | Msa0347310:intron | 45.0% | |
| ACTACTATTGTAGCCAACCG+TGG | - | chr3_1:8279945-8279964 | Msa0347310:intron | 45.0% | |
| ! | CTTCTGGTTGGGAAACATTC+AGG | - | chr3_1:8279973-8279992 | Msa0347310:intron | 45.0% |
| AAATTTGTGGGGCAAGGAGA+AGG | - | chr3_1:8280154-8280173 | Msa0347310:intron | 45.0% | |
| CACTACTGTCACACTCCAAT+TGG | + | chr3_1:8280552-8280571 | None:intergenic | 45.0% | |
| CAATTGGAGTGTGACAGTAG+TGG | - | chr3_1:8280550-8280569 | Msa0347310:intron | 45.0% | |
| TGTTTGCTTTGCAGGACCAT+TGG | - | chr3_1:8281180-8281199 | Msa0347310:intron | 45.0% | |
| ! | GTTTAGGTGGGTTTGGATCT+TGG | + | chr3_1:8281292-8281311 | None:intergenic | 45.0% |
| CCCCAACAAAAGGTTTAGGT+GGG | + | chr3_1:8281304-8281323 | None:intergenic | 45.0% | |
| ! | CCCACCTAAACCTTTTGTTG+GGG | - | chr3_1:8281301-8281320 | Msa0347310:intron | 45.0% |
| ! | CCACCTAAACCTTTTGTTGG+GGG | - | chr3_1:8281302-8281321 | Msa0347310:intron | 45.0% |
| GATCCCCCAACAAAAGGTTT+AGG | + | chr3_1:8281308-8281327 | None:intergenic | 45.0% | |
| ! | ACCTTTTGTTGGGGGATCTT+TGG | - | chr3_1:8281310-8281329 | Msa0347310:intron | 45.0% |
| TATGTCAGCAAGCTGCAGAT+CGG | - | chr3_1:8281802-8281821 | Msa0347310:intron | 45.0% | |
| !! | GCATCTCCCCAGAAAGTATT+TGG | - | chr3_1:8282027-8282046 | Msa0347310:intron | 45.0% |
| CAAAGCAAAGCGTGATGCTT+TGG | + | chr3_1:8282288-8282307 | None:intergenic | 45.0% | |
| CCGAAAGAAGAAACCTCCAA+TGG | - | chr3_1:8282371-8282390 | Msa0347310:intron | 45.0% | |
| GGGTTACTCAGTAACCATGA+AGG | + | chr3_1:8282747-8282766 | None:intergenic | 45.0% | |
| CCGTGCAACTTTCTAACTGT+TGG | + | chr3_1:8282785-8282804 | None:intergenic | 45.0% | |
| AGAAAGTTGCACGGCATACT+AGG | - | chr3_1:8282791-8282810 | Msa0347310:intron | 45.0% | |
| GAAAGTTGCACGGCATACTA+GGG | - | chr3_1:8282792-8282811 | Msa0347310:intron | 45.0% | |
| AAGGGAGGATACTGGTCAAA+AGG | + | chr3_1:8283268-8283287 | None:intergenic | 45.0% | |
| AGGCTTGGGATGTTCTTGAA+AGG | + | chr3_1:8283699-8283718 | None:intergenic | 45.0% | |
| CACAAAGTCTAAGGAGGCTT+GGG | + | chr3_1:8283713-8283732 | None:intergenic | 45.0% | |
| GGTCATCATTAGACCGAACT+GGG | + | chr3_1:8284147-8284166 | None:intergenic | 45.0% | |
| AGGTCATCATTAGACCGAAC+TGG | + | chr3_1:8284148-8284167 | None:intergenic | 45.0% | |
| GGTCTAATGATGACCTACTC+TGG | - | chr3_1:8284152-8284171 | Msa0347310:intron | 45.0% | |
| CTAATGATGACCTACTCTGG+GGG | - | chr3_1:8284155-8284174 | Msa0347310:intron | 45.0% | |
| AGGATTGAGTCTCTTGGTCA+CGG | + | chr3_1:8284294-8284313 | None:intergenic | 45.0% | |
| TTGGCAACAACACTAGGGTT+GGG | + | chr3_1:8284351-8284370 | None:intergenic | 45.0% | |
| ! | ATTTTTCCAGTGCTTGCCTC+AGG | - | chr3_1:8284567-8284586 | Msa0347310:intron | 45.0% |
| ! | ATTGGTGGTTTCAGATCCTG+AGG | + | chr3_1:8284586-8284605 | None:intergenic | 45.0% |
| !! | GATTTGGTGAACATGTCTGC+TGG | - | chr3_1:8284813-8284832 | Msa0347310:intron | 45.0% |
| CATGGTTGAGAAAGTGGCAT+CGG | + | chr3_1:8284847-8284866 | None:intergenic | 45.0% | |
| GGAGATCATGGTTGAGAAAG+TGG | + | chr3_1:8284853-8284872 | None:intergenic | 45.0% | |
| !! | GGAGAAATGGGGATTAGTCA+AGG | + | chr3_1:8284999-8285018 | None:intergenic | 45.0% |
| AAAGGGTCAAGGAAGCCATA+TGG | + | chr3_1:8285037-8285056 | None:intergenic | 45.0% | |
| CTTCCTTGACCCTTTCAACA+AGG | - | chr3_1:8285042-8285061 | Msa0347310:intron | 45.0% | |
| !! | GGATGCTTTGGAAGGATATG+TGG | + | chr3_1:8285207-8285226 | None:intergenic | 45.0% |
| AAGTATACGAGGTCACAACC+AGG | + | chr3_1:8285233-8285252 | None:intergenic | 45.0% | |
| TTGAATGGGACTTTGACAGG+TGG | + | chr3_1:8285260-8285279 | None:intergenic | 45.0% | |
| ! | AGTCGGTTTATGGCAAATCC+GGG | + | chr3_1:8285323-8285342 | None:intergenic | 45.0% |
| AGGTTACTTGAGGAAAGTGG+TGG | + | chr3_1:8285543-8285562 | None:intergenic | 45.0% | |
| GCAAGGTTACTTGAGGAAAG+TGG | + | chr3_1:8285546-8285565 | None:intergenic | 45.0% | |
| ! | ATGGGTTGAAGCAAAGTCCA+AGG | + | chr3_1:8285850-8285869 | None:intergenic | 45.0% |
| CGCATTTCTACATGGAGAGT+TGG | + | chr3_1:8285951-8285970 | None:intergenic | 45.0% | |
| GTGAAGACCGCATTTCTACA+TGG | + | chr3_1:8285959-8285978 | None:intergenic | 45.0% | |
| ! | AGGGTTTTACTCAGGTGGAA+GGG | + | chr3_1:8286084-8286103 | None:intergenic | 45.0% |
| ! | AAGGGTTTTACTCAGGTGGA+AGG | + | chr3_1:8286085-8286104 | None:intergenic | 45.0% |
| ! | AGCAAAGGGTTTTACTCAGG+TGG | + | chr3_1:8286089-8286108 | None:intergenic | 45.0% |
| CCCACTACCCTTTGATTCTT+AGG | - | chr3_1:8286181-8286200 | Msa0347310:intron | 45.0% | |
| CTCGGAACCAAAGAACTTCA+GGG | + | chr3_1:8286305-8286324 | None:intergenic | 45.0% | |
| ACTCGGAACCAAAGAACTTC+AGG | + | chr3_1:8286306-8286325 | None:intergenic | 45.0% | |
| AGCTAGCAAGAGATAGGCAA+AGG | + | chr3_1:8286408-8286427 | None:intergenic | 45.0% | |
| TCTCTTGCTAGCTGATAGTC+AGG | - | chr3_1:8286415-8286434 | Msa0347310:intron | 45.0% | |
| TACCACTGATGAAAGGGAAG+GGG | + | chr3_1:8286491-8286510 | None:intergenic | 45.0% | |
| CTACCACTGATGAAAGGGAA+GGG | + | chr3_1:8286492-8286511 | None:intergenic | 45.0% | |
| TGGATACAAGCTCAGAAACG+AGG | + | chr3_1:8286543-8286562 | None:intergenic | 45.0% | |
| TCGTTTCTGAGCTTGTATCC+AGG | - | chr3_1:8286542-8286561 | Msa0347310:intron | 45.0% | |
| ! | ACTTTTGATGAGACCCGCAT+GGG | + | chr3_1:8286583-8286602 | None:intergenic | 45.0% |
| ! | TACTTTTGATGAGACCCGCA+TGG | + | chr3_1:8286584-8286603 | None:intergenic | 45.0% |
| AAACTGTGGAAGATGGAACC+TGG | + | chr3_1:8286637-8286656 | None:intergenic | 45.0% | |
| ! | GGTTATCCTGAAGGTGTGAA+AGG | + | chr3_1:8286664-8286683 | None:intergenic | 45.0% |
| AGCATTTGCTCATGTCAGAC+AGG | + | chr3_1:8286725-8286744 | None:intergenic | 45.0% | |
| TCAAGACACCTATGGAGGTT+TGG | + | chr3_1:8286795-8286814 | None:intergenic | 45.0% | |
| AGATCTCAAGACACCTATGG+AGG | + | chr3_1:8286800-8286819 | None:intergenic | 45.0% | |
| GGATTGTCCAAGAGTTTCTG+GGG | + | chr3_1:8286877-8286896 | None:intergenic | 45.0% | |
| CTGGATTGTCCAAGAGTTTC+TGG | + | chr3_1:8286879-8286898 | None:intergenic | 45.0% | |
| CGTGTGAGGTGTATGTTGTT+GGG | + | chr3_1:8286904-8286923 | None:intergenic | 45.0% | |
| TCAGCAAGACCATTCTGTTG+AGG | - | chr3_1:8286949-8286968 | Msa0347310:CDS | 45.0% | |
| GCATACACACCTCAACAGAA+TGG | + | chr3_1:8286961-8286980 | None:intergenic | 45.0% | |
| ! | TATAAGGAGGCATAGAACCG+TGG | + | chr3_1:8286983-8287002 | None:intergenic | 45.0% |
| !! | ACTGCTCTGAAACAAACTCC+AGG | - | chr3_1:8287028-8287047 | Msa0347310:CDS | 45.0% |
| TCAGTTAAAACTCATGGGGG+AGG | + | chr3_1:8287210-8287229 | None:intergenic | 45.0% | |
| TTAGGTCATGTCAGTGAGAG+GGG | + | chr3_1:8287402-8287421 | None:intergenic | 45.0% | |
| GTTAGGTCATGTCAGTGAGA+GGG | + | chr3_1:8287403-8287422 | None:intergenic | 45.0% | |
| CGATGCATGACCTATAACAG+TGG | - | chr3_1:8287470-8287489 | Msa0347310:intron | 45.0% | |
| !! | ACTTTGGAGCTGAAAGAAGG+TGG | + | chr3_1:8287756-8287775 | None:intergenic | 45.0% |
| ! | GACAAGTTGGGAACCTGAAA+AGG | + | chr3_1:8287838-8287857 | None:intergenic | 45.0% |
| GAGCACTAACTGTGACAAGT+TGG | + | chr3_1:8287851-8287870 | None:intergenic | 45.0% | |
| CAGATTGCAAGTGAAGAGGA+AGG | + | chr3_1:8287888-8287907 | None:intergenic | 45.0% | |
| CGTTCAGATTGCAAGTGAAG+AGG | + | chr3_1:8287892-8287911 | None:intergenic | 45.0% | |
| TCACTTGCAATCTGAACGGA+TGG | - | chr3_1:8287894-8287913 | Msa0347310:CDS | 45.0% | |
| GAAAGATTGTCCGGAGAGAA+AGG | + | chr3_1:8287937-8287956 | None:intergenic | 45.0% | |
| TCAAAGTCTAGGTCAAAGGG+TGG | + | chr3_1:8288014-8288033 | None:intergenic | 45.0% | |
| AAGGCTTGAATGTCTCAAGG+GGG | + | chr3_1:8288079-8288098 | None:intergenic | 45.0% | |
| GAAGGCTTGAATGTCTCAAG+GGG | + | chr3_1:8288080-8288099 | None:intergenic | 45.0% | |
| GAGAAGGCTTGAATGTCTCA+AGG | + | chr3_1:8288082-8288101 | None:intergenic | 45.0% | |
| !! | AGAAGGCACTATCACTTTGG+AGG | + | chr3_1:8288171-8288190 | None:intergenic | 45.0% |
| ! | AGGCTTTATCCTCATCATCC+AGG | - | chr3_1:8288255-8288274 | Msa0347310:intron | 45.0% |
| GGCGAACATAGATGTAAACC+TGG | + | chr3_1:8288276-8288295 | None:intergenic | 45.0% | |
| TCCGTCAGTTGCTCCATTAT+AGG | - | chr3_1:8288320-8288339 | Msa0347310:intron | 45.0% | |
| CAGACATTGTCTATGTGCCA+AGG | - | chr3_1:8288382-8288401 | Msa0347310:intron | 45.0% | |
| TTGTCTATGTGCCAAGGACT+TGG | - | chr3_1:8288388-8288407 | Msa0347310:intron | 45.0% | |
| AGACTACTGCTGTGTCTATG+TGG | + | chr3_1:8288439-8288458 | None:intergenic | 45.0% | |
| !! | GGTGTTGAGAGAGGTATCAA+GGG | + | chr3_1:8288462-8288481 | None:intergenic | 45.0% |
| !! | AGGTGTTGAGAGAGGTATCA+AGG | + | chr3_1:8288463-8288482 | None:intergenic | 45.0% |
| CATTCTGTGTCTTGGGGATA+AGG | + | chr3_1:8288483-8288502 | None:intergenic | 45.0% | |
| GGCGGAGATGAATGATAAAG+CGG | + | chr3_1:8288516-8288535 | None:intergenic | 45.0% | |
| GGTTGTGGAAGGTAAAGATG+AGG | + | chr3_1:8288619-8288638 | None:intergenic | 45.0% | |
| !! | TAACGACTTTGGGTTGTGGA+AGG | + | chr3_1:8288630-8288649 | None:intergenic | 45.0% |
| !! | GTAGTAACGACTTTGGGTTG+TGG | + | chr3_1:8288634-8288653 | None:intergenic | 45.0% |
| AGGTATCATGGGTTCGAAGT+GGG | + | chr3_1:8288675-8288694 | None:intergenic | 45.0% | |
| ! | TTGATTTGACCTTTGCCCCA+CGG | - | chr3_1:8288700-8288719 | Msa0347310:intron | 45.0% |
| CACAACGAATCCGCAACAAT+TGG | + | chr3_1:8288732-8288751 | None:intergenic | 45.0% | |
| GGTCATCATTAGACCGAACT+GGG | + | chr3_1:8284147-8284166 | None:intergenic | 45.0% | |
| AGGTCATCATTAGACCGAAC+TGG | + | chr3_1:8284148-8284167 | None:intergenic | 45.0% | |
| GGTCTAATGATGACCTACTC+TGG | - | chr3_1:8284152-8284171 | Msa0347310:intron | 45.0% | |
| CTAATGATGACCTACTCTGG+GGG | - | chr3_1:8284155-8284174 | Msa0347310:intron | 45.0% | |
| AGGATTGAGTCTCTTGGTCA+CGG | + | chr3_1:8284294-8284313 | None:intergenic | 45.0% | |
| TTGGCAACAACACTAGGGTT+GGG | + | chr3_1:8284351-8284370 | None:intergenic | 45.0% | |
| ! | ATTTTTCCAGTGCTTGCCTC+AGG | - | chr3_1:8284567-8284586 | Msa0347310:intron | 45.0% |
| ! | ATTGGTGGTTTCAGATCCTG+AGG | + | chr3_1:8284586-8284605 | None:intergenic | 45.0% |
| !! | GAGCTTCTGGTTCTGATTCA+AGG | + | chr3_1:8289505-8289524 | None:intergenic | 45.0% |
| TGAATCAGAACCAGAAGCTC+TGG | - | chr3_1:8289505-8289524 | Msa0347310:intron | 45.0% | |
| AAATCGGTATCCAGAGCTTC+TGG | + | chr3_1:8289518-8289537 | None:intergenic | 45.0% | |
| GCATGGGATGAAAGTGATTG+TGG | - | chr3_1:8290041-8290060 | Msa0347310:intron | 45.0% | |
| GTGGATTTGCATGCAGTTGA+AGG | - | chr3_1:8290060-8290079 | Msa0347310:intron | 45.0% | |
| TCTATGACAGAGACTGTCTG+AGG | + | chr3_1:8290153-8290172 | None:intergenic | 45.0% | |
| TCCTCCTTAGACAGAATGCT+AGG | - | chr3_1:8290402-8290421 | Msa0347310:intron | 45.0% | |
| TCCTAGCATTCTGTCTAAGG+AGG | + | chr3_1:8290406-8290425 | None:intergenic | 45.0% | |
| GGGAAGCTTATGATGTTGTG+AGG | - | chr3_1:8290627-8290646 | Msa0347310:intron | 45.0% | |
| TCAACCACTTGAGACTCCAA+TGG | + | chr3_1:8291127-8291146 | None:intergenic | 45.0% | |
| CTCAAGTGGTTGATCGAGAA+TGG | - | chr3_1:8291134-8291153 | Msa0347310:CDS | 45.0% | |
| !! | AATATGTATATAAATTATAT+GGG | + | chr3_1:8277424-8277443 | None:intergenic | 5.0% |
| !! | AAATATGTATATAAATTATA+TGG | + | chr3_1:8277425-8277444 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | - | chr3_1:8278074-8278093 | Msa0347310:intron | 5.0% |
| !!! | AAATATAATTAATTTTGTAT+GGG | - | chr3_1:8279341-8279360 | Msa0347310:intron | 5.0% |
| !! | GGAAACTGGCTTGTTGCTGA+AGG | - | chr3_1:8277341-8277360 | Msa0347310:CDS | 50.0% |
| !! | ACTGGCTTGTTGCTGAAGGA+TGG | - | chr3_1:8277345-8277364 | Msa0347310:CDS | 50.0% |
| ! | GCTTGTTGCTGAAGGATGGA+TGG | - | chr3_1:8277349-8277368 | Msa0347310:CDS | 50.0% |
| ATGGAGCCTTCTCGCTTTGA+CGG | - | chr3_1:8277368-8277387 | Msa0347310:CDS | 50.0% | |
| ! | GTGAATAAGTGGGGTGTCAG+AGG | + | chr3_1:8277844-8277863 | None:intergenic | 50.0% |
| ! | AGGTTTGGGGTTCAAACCTC+GGG | + | chr3_1:8278102-8278121 | None:intergenic | 50.0% |
| CTAAGCTAAGCTCACGAGGA+CGG | - | chr3_1:8278150-8278169 | Msa0347310:intron | 50.0% | |
| !!! | GTTTTGTTTAGCCCCATGGC+CGG | - | chr3_1:8278438-8278457 | Msa0347310:intron | 50.0% |
| !! | CTTTGCTCTGAAAATGGGGG+AGG | - | chr3_1:8278595-8278614 | Msa0347310:intron | 50.0% |
| ACCAGAAGGTGAACTACGGT+CGG | + | chr3_1:8278635-8278654 | None:intergenic | 50.0% | |
| ACCGTAGTTCACCTTCTGGT+TGG | - | chr3_1:8278635-8278654 | Msa0347310:intron | 50.0% | |
| CCCAACCAGAAGGTGAACTA+CGG | + | chr3_1:8278639-8278658 | None:intergenic | 50.0% | |
| ! | CCGTAGTTCACCTTCTGGTT+GGG | - | chr3_1:8278636-8278655 | Msa0347310:intron | 50.0% |
| !! | GGAAACTGGCTTGTTGCTGA+AGG | - | chr3_1:8277341-8277360 | Msa0347310:CDS | 50.0% |
| !! | ACTGGCTTGTTGCTGAAGGA+TGG | - | chr3_1:8277345-8277364 | Msa0347310:CDS | 50.0% |
| ! | GCTTGTTGCTGAAGGATGGA+TGG | - | chr3_1:8277349-8277368 | Msa0347310:CDS | 50.0% |
| ! | TGGCTCATTTGCAGCTTTGG+AGG | - | chr3_1:8280092-8280111 | Msa0347310:intron | 50.0% |
| !! | GGCTCATTTGCAGCTTTGGA+GGG | - | chr3_1:8280093-8280112 | Msa0347310:intron | 50.0% |
| !!! | GGTCTATTTTGGCGGGTACT+TGG | - | chr3_1:8280280-8280299 | Msa0347310:intron | 50.0% |
| GATGCTGTGAGGATACCTGT+TGG | - | chr3_1:8281254-8281273 | Msa0347310:intron | 50.0% | |
| CTGTGAGGATACCTGTTGGA+TGG | - | chr3_1:8281258-8281277 | Msa0347310:intron | 50.0% | |
| TGAGGATACCTGTTGGATGG+TGG | - | chr3_1:8281261-8281280 | Msa0347310:intron | 50.0% | |
| CCCCCAACAAAAGGTTTAGG+TGG | + | chr3_1:8281305-8281324 | None:intergenic | 50.0% | |
| GCCAAAGATCCCCCAACAAA+AGG | + | chr3_1:8281314-8281333 | None:intergenic | 50.0% | |
| CCACAAAGTCTAAGGAGGCT+TGG | + | chr3_1:8283714-8283733 | None:intergenic | 50.0% | |
| CCAAGCCTCCTTAGACTTTG+TGG | - | chr3_1:8283711-8283730 | Msa0347310:intron | 50.0% | |
| CAAATGCTACTGTGCTGCAG+AGG | + | chr3_1:8283843-8283862 | None:intergenic | 50.0% | |
| GGATTGAGTCTCTTGGTCAC+GGG | + | chr3_1:8284293-8284312 | None:intergenic | 50.0% | |
| CTTGGCAACAACACTAGGGT+TGG | + | chr3_1:8284352-8284371 | None:intergenic | 50.0% | |
| CTGGAAAAATCGTGCCACGA+TGG | + | chr3_1:8284557-8284576 | None:intergenic | 50.0% | |
| ! | GGATCTGAAACCACCAATCG+TGG | - | chr3_1:8284588-8284607 | Msa0347310:intron | 50.0% |
| GAGAGCAGCAAGGTGATTGA+TGG | + | chr3_1:8284723-8284742 | None:intergenic | 50.0% | |
| AGCCCTTGTTGAAAGGGTCA+AGG | + | chr3_1:8285048-8285067 | None:intergenic | 50.0% | |
| TGTTCGGTACAGCGGTAACT+TGG | + | chr3_1:8285124-8285143 | None:intergenic | 50.0% | |
| ! | TATGTGGATGCGGACTATGC+AGG | + | chr3_1:8285191-8285210 | None:intergenic | 50.0% |
| ACAACCAGGAAGGGATGCTT+TGG | + | chr3_1:8285219-8285238 | None:intergenic | 50.0% | |
| TACGAGGTCACAACCAGGAA+GGG | + | chr3_1:8285228-8285247 | None:intergenic | 50.0% | |
| ATACGAGGTCACAACCAGGA+AGG | + | chr3_1:8285229-8285248 | None:intergenic | 50.0% | |
| ! | CAGGTGGTCTGAAGTATACG+AGG | + | chr3_1:8285244-8285263 | None:intergenic | 50.0% |
| !! | GCACTGGCAAGCTTTGAAGT+GGG | + | chr3_1:8285294-8285313 | None:intergenic | 50.0% |
| !! | TGCACTGGCAAGCTTTGAAG+TGG | + | chr3_1:8285295-8285314 | None:intergenic | 50.0% |
| !! | GGGGTTGGAAGCATCATGTA+TGG | + | chr3_1:8285392-8285411 | None:intergenic | 50.0% |
| CTTCCAACCCCACTTGCATA+GGG | - | chr3_1:8285401-8285420 | Msa0347310:intron | 50.0% | |
| ! | AGGGTACTCCCTATGCAAGT+GGG | + | chr3_1:8285412-8285431 | None:intergenic | 50.0% |
| AAAGTCGTTGGCACTCCTCT+TGG | + | chr3_1:8285497-8285516 | None:intergenic | 50.0% | |
| TGAAGCAAAGTCCAAGGCAG+TGG | + | chr3_1:8285844-8285863 | None:intergenic | 50.0% | |
| GCAACAACCAGAAGGTTTCG+TGG | + | chr3_1:8285912-8285931 | None:intergenic | 50.0% | |
| ! | GGTCGAAGCACCAAGGTATA+AGG | + | chr3_1:8286122-8286141 | None:intergenic | 50.0% |
| !! | AAGGGTAGTGGGAAGCAAGT+GGG | + | chr3_1:8286173-8286192 | None:intergenic | 50.0% |
| !! | AAAGGGTAGTGGGAAGCAAG+TGG | + | chr3_1:8286174-8286193 | None:intergenic | 50.0% |
| CTGGCTGAAGGCAATGAATG+AGG | + | chr3_1:8286254-8286273 | None:intergenic | 50.0% | |
| !! | TGAAAGCAAGGACTGGCTGA+AGG | + | chr3_1:8286266-8286285 | None:intergenic | 50.0% |
| ! | TCTTGGCCTTCACTCTCATC+AGG | - | chr3_1:8286448-8286467 | Msa0347310:intron | 50.0% |
| CCAGTACCTGATGAGAGTGA+AGG | + | chr3_1:8286457-8286476 | None:intergenic | 50.0% | |
| CCTTCACTCTCATCAGGTAC+TGG | - | chr3_1:8286454-8286473 | Msa0347310:intron | 50.0% | |
| CCTACCACTGATGAAAGGGA+AGG | + | chr3_1:8286493-8286512 | None:intergenic | 50.0% | |
| CCTTCCCTTTCATCAGTGGT+AGG | - | chr3_1:8286490-8286509 | Msa0347310:intron | 50.0% | |
| GGAGCCTACCACTGATGAAA+GGG | + | chr3_1:8286497-8286516 | None:intergenic | 50.0% | |
| TGGAGCCTACCACTGATGAA+AGG | + | chr3_1:8286498-8286517 | None:intergenic | 50.0% | |
| CTTTGCACTTCATCCCCATG+CGG | - | chr3_1:8286566-8286585 | Msa0347310:intron | 50.0% | |
| TTTGCACTTCATCCCCATGC+GGG | - | chr3_1:8286567-8286586 | Msa0347310:intron | 50.0% | |
| ! | CTTTTGATGAGACCCGCATG+GGG | + | chr3_1:8286582-8286601 | None:intergenic | 50.0% |
| ! | CACCTATGGAGGTTTGGAGT+GGG | + | chr3_1:8286789-8286808 | None:intergenic | 50.0% |
| ACACCTATGGAGGTTTGGAG+TGG | + | chr3_1:8286790-8286809 | None:intergenic | 50.0% | |
| AGCTTCTCCCCAGAAACTCT+TGG | - | chr3_1:8286867-8286886 | Msa0347310:intron | 50.0% | |
| AGGTGTATGTTGTTGGGAGC+TGG | + | chr3_1:8286898-8286917 | None:intergenic | 50.0% | |
| GCGTGTGAGGTGTATGTTGT+TGG | + | chr3_1:8286905-8286924 | None:intergenic | 50.0% | |
| CTGTTGAGGTGTGTATGCCA+CGG | - | chr3_1:8286963-8286982 | Msa0347310:CDS | 50.0% | |
| GCAGGAAACGAGGTATAAGG+AGG | + | chr3_1:8286996-8287015 | None:intergenic | 50.0% | |
| GTTGAGAACTGACAATGGCC+TGG | + | chr3_1:8287049-8287068 | None:intergenic | 50.0% | |
| ! | CACAAGGTGAAGTTTGGGGT+GGG | + | chr3_1:8287291-8287310 | None:intergenic | 50.0% |
| ACACAAGGTGAAGTTTGGGG+TGG | + | chr3_1:8287292-8287311 | None:intergenic | 50.0% | |
| GGTTAGGTCATGTCAGTGAG+AGG | + | chr3_1:8287404-8287423 | None:intergenic | 50.0% | |
| GGTTGCTAGTGTAGACACTC+TGG | + | chr3_1:8287451-8287470 | None:intergenic | 50.0% | |
| TTGGGAACCTGAAAAGGGCT+GGG | + | chr3_1:8287832-8287851 | None:intergenic | 50.0% | |
| ! | GAGGAAGGTTATGAGAGTGC+TGG | + | chr3_1:8287873-8287892 | None:intergenic | 50.0% |
| GAGAGAAAGGGCAATGGAAG+TGG | + | chr3_1:8287924-8287943 | None:intergenic | 50.0% | |
| CTTCCATTGCCCTTTCTCTC+CGG | - | chr3_1:8287924-8287943 | Msa0347310:CDS | 50.0% | |
| AGGGGGAGAAGTGAAAACAG+AGG | + | chr3_1:8288062-8288081 | None:intergenic | 50.0% | |
| !! | TGGGGATAAGGTGTTGAGAG+AGG | + | chr3_1:8288471-8288490 | None:intergenic | 50.0% |
| TTCATCTCCGCCTTCTCAAC+AGG | - | chr3_1:8288524-8288543 | Msa0347310:intron | 50.0% | |
| TCTGACACCTGTTGAGAAGG+CGG | + | chr3_1:8288534-8288553 | None:intergenic | 50.0% | |
| GCATCTGACACCTGTTGAGA+AGG | + | chr3_1:8288537-8288556 | None:intergenic | 50.0% | |
| CAGGTATCATGGGTTCGAAG+TGG | + | chr3_1:8288676-8288695 | None:intergenic | 50.0% | |
| CACTTCGAACCCATGATACC+TGG | - | chr3_1:8288674-8288693 | Msa0347310:intron | 50.0% | |
| ! | GGGAAGAGGCTGGGATTTTT+GGG | + | chr3_1:8289018-8289037 | None:intergenic | 50.0% |
| GGATTGAGTCTCTTGGTCAC+GGG | + | chr3_1:8284293-8284312 | None:intergenic | 50.0% | |
| CTTGGCAACAACACTAGGGT+TGG | + | chr3_1:8284352-8284371 | None:intergenic | 50.0% | |
| CTGGAAAAATCGTGCCACGA+TGG | + | chr3_1:8284557-8284576 | None:intergenic | 50.0% | |
| ! | GGATCTGAAACCACCAATCG+TGG | - | chr3_1:8284588-8284607 | Msa0347310:intron | 50.0% |
| GTTGGGAGTGAAGCCATGAA+TGG | + | chr3_1:8289439-8289458 | None:intergenic | 50.0% | |
| ! | GAGCATAGTGGGACAAGAGA+TGG | - | chr3_1:8290099-8290118 | Msa0347310:intron | 50.0% |
| GAGCTGATGAATGAGCCACT+AGG | - | chr3_1:8290572-8290591 | Msa0347310:intron | 50.0% | |
| AGAGACACCACTAAGATCCC+AGG | + | chr3_1:8290837-8290856 | None:intergenic | 50.0% | |
| !! | TAGGGGAATGGACTGCTGAA+TGG | - | chr3_1:8290988-8291007 | Msa0347310:intron | 50.0% |
| CTGAGTGCCCCTATCACCAA+GGG | + | chr3_1:8277215-8277234 | None:intergenic | 55.0% | |
| !! | CCTGCGTTGGCTATCACCAA+GGG | + | chr3_1:8278799-8278818 | None:intergenic | 55.0% |
| !! | TCCTGCGTTGGCTATCACCA+AGG | + | chr3_1:8278800-8278819 | None:intergenic | 55.0% |
| AGTTCCTCCCCCATCTTCAG+CGG | + | chr3_1:8279928-8279947 | None:intergenic | 55.0% | |
| ACCAGAAGCAGAACCACGGT+TGG | + | chr3_1:8279961-8279980 | None:intergenic | 55.0% | |
| ! | ACCGTGGTTCTGCTTCTGGT+TGG | - | chr3_1:8279961-8279980 | Msa0347310:intron | 55.0% |
| CCCAACCAGAAGCAGAACCA+CGG | + | chr3_1:8279965-8279984 | None:intergenic | 55.0% | |
| ! | CCGTGGTTCTGCTTCTGGTT+GGG | - | chr3_1:8279962-8279981 | Msa0347310:intron | 55.0% |
| TGGGCTATCCACCATCCAAC+AGG | + | chr3_1:8281272-8281291 | None:intergenic | 55.0% | |
| ! | CGGGAAGAGGCTGGGATTTT+GGG | + | chr3_1:8284274-8284293 | None:intergenic | 55.0% |
| ! | ACGGGAAGAGGCTGGGATTT+TGG | + | chr3_1:8284275-8284294 | None:intergenic | 55.0% |
| AGTCTCTTGGTCACGGGAAG+AGG | + | chr3_1:8284287-8284306 | None:intergenic | 55.0% | |
| GGAATCGTAACGTGGCACGA+TGG | + | chr3_1:8284536-8284555 | None:intergenic | 55.0% | |
| GCCACGTTACGATTCCATCG+TGG | - | chr3_1:8284540-8284559 | Msa0347310:intron | 55.0% | |
| GCCACGATGGAATCGTAACG+TGG | + | chr3_1:8284544-8284563 | None:intergenic | 55.0% | |
| TCAGATCCTGAGGCAAGCAC+TGG | + | chr3_1:8284576-8284595 | None:intergenic | 55.0% | |
| TCAGAAGCAACGTGCCACGA+TGG | + | chr3_1:8284625-8284644 | None:intergenic | 55.0% | |
| GAAGGTTGGAGAGAGCAGCA+AGG | + | chr3_1:8284733-8284752 | None:intergenic | 55.0% | |
| CGGTACAGCGGTAACTTGGA+AGG | + | chr3_1:8285120-8285139 | None:intergenic | 55.0% | |
| ! | CCAGGAAGGGATGCTTTGGA+AGG | + | chr3_1:8285215-8285234 | None:intergenic | 55.0% |
| ! | CCTTCCAAAGCATCCCTTCC+TGG | - | chr3_1:8285212-8285231 | Msa0347310:intron | 55.0% |
| CAAATCCGGGTCAAGTGCAC+TGG | + | chr3_1:8285310-8285329 | None:intergenic | 55.0% | |
| GCTTCCAACCCCACTTGCAT+AGG | - | chr3_1:8285400-8285419 | Msa0347310:intron | 55.0% | |
| ACTCCCTATGCAAGTGGGGT+TGG | + | chr3_1:8285407-8285426 | None:intergenic | 55.0% | |
| GGGTACTCCCTATGCAAGTG+GGG | + | chr3_1:8285411-8285430 | None:intergenic | 55.0% | |
| !! | GAGGGTACTCCCTATGCAAG+TGG | + | chr3_1:8285413-8285432 | None:intergenic | 55.0% |
| AACCGACGATACCACTGCCT+TGG | - | chr3_1:8285830-8285849 | Msa0347310:intron | 55.0% | |
| GTCCAAGGCAGTGGTATCGT+CGG | + | chr3_1:8285835-8285854 | None:intergenic | 55.0% | |
| CACTGATGAAAGGGAAGGGG+AGG | + | chr3_1:8286488-8286507 | None:intergenic | 55.0% | |
| CTCCCCTTCCCTTTCATCAG+TGG | - | chr3_1:8286486-8286505 | Msa0347310:intron | 55.0% | |
| GGGGATGAAGTGCAAAGACC+TGG | + | chr3_1:8286563-8286582 | None:intergenic | 55.0% | |
| CTGTGGAAGATGGAACCTGG+AGG | + | chr3_1:8286634-8286653 | None:intergenic | 55.0% | |
| CTCCCACTCCAAACCTCCAT+AGG | - | chr3_1:8286784-8286803 | Msa0347310:CDS | 55.0% | |
| ACACCTCACACGCTCCAACA+AGG | - | chr3_1:8286912-8286931 | Msa0347310:intron | 55.0% | |
| GAAGGTGGAGTTGTTCGCCT+TGG | + | chr3_1:8287741-8287760 | None:intergenic | 55.0% | |
| ! | TCCAAGACCCAGCCCTTTTC+AGG | - | chr3_1:8287822-8287841 | Msa0347310:CDS | 55.0% |
| ACCTGAAAAGGGCTGGGTCT+TGG | + | chr3_1:8287826-8287845 | None:intergenic | 55.0% | |
| GTTGGGAACCTGAAAAGGGC+TGG | + | chr3_1:8287833-8287852 | None:intergenic | 55.0% | |
| TGTCCGGAGAGAAAGGGCAA+TGG | + | chr3_1:8287930-8287949 | None:intergenic | 55.0% | |
| TCAACAGGTGTCAGATGCGC+AGG | - | chr3_1:8288539-8288558 | Msa0347310:intron | 55.0% | |
| ATTTGACCTTTGCCCCACGG+TGG | - | chr3_1:8288703-8288722 | Msa0347310:intron | 55.0% | |
| TTTGACCTTTGCCCCACGGT+GGG | - | chr3_1:8288704-8288723 | Msa0347310:intron | 55.0% | |
| ! | CGGGAAGAGGCTGGGATTTT+TGG | + | chr3_1:8284274-8284293 | None:intergenic | 55.0% |
| AGTCTCTTGGTCACGGGAAG+AGG | + | chr3_1:8284287-8284306 | None:intergenic | 55.0% | |
| GGAATCGTAACGTGGCACGA+TGG | + | chr3_1:8284536-8284555 | None:intergenic | 55.0% | |
| GCCACGTTACGATTCCATCG+TGG | - | chr3_1:8284540-8284559 | Msa0347310:intron | 55.0% | |
| GCCACGATGGAATCGTAACG+TGG | + | chr3_1:8284544-8284563 | None:intergenic | 55.0% | |
| TCAGATCCTGAGGCAAGCAC+TGG | + | chr3_1:8284576-8284595 | None:intergenic | 55.0% | |
| TCAGAAGCAACGTGCCACGA+TGG | + | chr3_1:8284625-8284644 | None:intergenic | 55.0% | |
| GACAGAGCCTGGGATCTTAG+TGG | - | chr3_1:8290827-8290846 | Msa0347310:CDS | 55.0% | |
| CCTGAGTGCCCCTATCACCA+AGG | + | chr3_1:8277216-8277235 | None:intergenic | 60.0% | |
| !! | CCTTGGTGATAGGGGCACTC+AGG | - | chr3_1:8277213-8277232 | Msa0347310:CDS | 60.0% |
| AGCTAAGCTCACGAGGACGG+TGG | - | chr3_1:8278153-8278172 | Msa0347310:intron | 60.0% | |
| GCCGACCGTAGTTCACCTTC+TGG | - | chr3_1:8278631-8278650 | Msa0347310:intron | 60.0% | |
| ! | CCCTTGGTGATAGCCAACGC+AGG | - | chr3_1:8278796-8278815 | Msa0347310:intron | 60.0% |
| CTTTCCGCTGAAGATGGGGG+AGG | - | chr3_1:8279921-8279940 | Msa0347310:intron | 60.0% | |
| ! | GCCAACCGTGGTTCTGCTTC+TGG | - | chr3_1:8279957-8279976 | Msa0347310:intron | 60.0% |
| GGTGCAGAGTTTGAGCCCGT+TGG | + | chr3_1:8280623-8280642 | None:intergenic | 60.0% | |
| CTTGGTCACGGGAAGAGGCT+GGG | + | chr3_1:8284282-8284301 | None:intergenic | 60.0% | |
| TCTTGGTCACGGGAAGAGGC+TGG | + | chr3_1:8284283-8284302 | None:intergenic | 60.0% | |
| GTGGCACGATGGTACGCTGA+AGG | + | chr3_1:8284525-8284544 | None:intergenic | 60.0% | |
| GAGCAACGTGCCACGATTGG+TGG | + | chr3_1:8284601-8284620 | None:intergenic | 60.0% | |
| GGAGAGCAACGTGCCACGAT+TGG | + | chr3_1:8284604-8284623 | None:intergenic | 60.0% | |
| TGGCACGTTGCTCTCCATCG+TGG | - | chr3_1:8284608-8284627 | Msa0347310:intron | 60.0% | |
| GCTTGCCAGTGCACTTGACC+CGG | - | chr3_1:8285302-8285321 | Msa0347310:intron | 60.0% | |
| !! | TACCTTGGTGCTTCGACCCC+TGG | - | chr3_1:8286124-8286143 | Msa0347310:intron | 60.0% |
| ! | TACCAGGGGTCGAAGCACCA+AGG | + | chr3_1:8286129-8286148 | None:intergenic | 60.0% |
| ! | GGAGGTTTGGAGTGGGAGAC+CGG | + | chr3_1:8286782-8286801 | None:intergenic | 60.0% |
| GGACCTTGTTGGAGCGTGTG+AGG | + | chr3_1:8286918-8286937 | None:intergenic | 60.0% | |
| AGGGCTGGGTCTTGGACTCT+GGG | + | chr3_1:8287818-8287837 | None:intergenic | 60.0% | |
| AAGGGCTGGGTCTTGGACTC+TGG | + | chr3_1:8287819-8287838 | None:intergenic | 60.0% | |
| AACAATTGGCGCCCACCGTG+GGG | + | chr3_1:8288718-8288737 | None:intergenic | 60.0% | |
| CAACAATTGGCGCCCACCGT+GGG | + | chr3_1:8288719-8288738 | None:intergenic | 60.0% | |
| ACGGTGGGCGCCAATTGTTG+CGG | - | chr3_1:8288719-8288738 | Msa0347310:intron | 60.0% | |
| CTTGGTCACGGGAAGAGGCT+GGG | + | chr3_1:8284282-8284301 | None:intergenic | 60.0% | |
| TCTTGGTCACGGGAAGAGGC+TGG | + | chr3_1:8284283-8284302 | None:intergenic | 60.0% | |
| GTGGCACGATGGTACGCTGA+AGG | + | chr3_1:8284525-8284544 | None:intergenic | 60.0% | |
| GAGCAACGTGCCACGATTGG+TGG | + | chr3_1:8284601-8284620 | None:intergenic | 60.0% | |
| GGAGAGCAACGTGCCACGAT+TGG | + | chr3_1:8284604-8284623 | None:intergenic | 60.0% | |
| TGGCACGTTGCTCTCCATCG+TGG | - | chr3_1:8284608-8284627 | Msa0347310:intron | 60.0% | |
| CCAAAATCAGGGGCGGAGCC+AGG | + | chr3_1:8277053-8277072 | None:intergenic | 65.0% | |
| ! | CCTGGCTCCGCCCCTGATTT+TGG | - | chr3_1:8277050-8277069 | Msa0347310:intron | 65.0% |
| GCTGCTCTCTCCCCCAGAGT+AGG | + | chr3_1:8284168-8284187 | None:intergenic | 65.0% | |
| GCAACAATTGGCGCCCACCG+TGG | + | chr3_1:8288720-8288739 | None:intergenic | 65.0% | |
| GCTGCTCTCTCCCCCAGAGT+AGG | + | chr3_1:8284168-8284187 | None:intergenic | 65.0% | |
| TGGCGCCCACCGTGGGGCAA+AGG | + | chr3_1:8288712-8288731 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 8276880 | 8291172 | 8276880 | ID=Msa0347310;Name=Msa0347310 |
| chr3_1 | mRNA | 8276880 | 8291172 | 8276880 | ID=Msa0347310-mRNA-1;Parent=Msa0347310;Name=Msa0347310-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|0.6|0.54|11|0|567 |
| chr3_1 | exon | 8291083 | 8291172 | 8291083 | ID=Msa0347310-mRNA-1:exon:2404;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8290640 | 8290864 | 8290640 | ID=Msa0347310-mRNA-1:exon:2403;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8289383 | 8289502 | 8289383 | ID=Msa0347310-mRNA-1:exon:2402;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8289057 | 8289260 | 8289057 | ID=Msa0347310-mRNA-1:exon:2401;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8288057 | 8288137 | 8288057 | ID=Msa0347310-mRNA-1:exon:2400;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8287758 | 8287946 | 8287758 | ID=Msa0347310-mRNA-1:exon:2399;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8286946 | 8287098 | 8286946 | ID=Msa0347310-mRNA-1:exon:2398;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8286689 | 8286858 | 8286689 | ID=Msa0347310-mRNA-1:exon:2397;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8277459 | 8277505 | 8277459 | ID=Msa0347310-mRNA-1:exon:2396;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8277204 | 8277446 | 8277204 | ID=Msa0347310-mRNA-1:exon:2395;Parent=Msa0347310-mRNA-1 |
| chr3_1 | exon | 8276880 | 8277061 | 8276880 | ID=Msa0347310-mRNA-1:exon:2394;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8291083 | 8291172 | 8291083 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8290640 | 8290864 | 8290640 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8289383 | 8289502 | 8289383 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8289057 | 8289260 | 8289057 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8288057 | 8288137 | 8288057 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8287758 | 8287946 | 8287758 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8286946 | 8287098 | 8286946 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8286689 | 8286858 | 8286689 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8277459 | 8277505 | 8277459 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8277204 | 8277446 | 8277204 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| chr3_1 | CDS | 8276880 | 8277061 | 8276880 | ID=Msa0347310-mRNA-1:cds;Parent=Msa0347310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
