Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489360 | XP_003598248.1 | 82.618 | 489 | 7 | 3 | 1 | 411 | 1 | 489 | 0.0 | 804 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489360 | sp|B0XN12|EXGA_ASPFC | 22.792 | 351 | 153 | 14 | 166 | 407 | 59 | 400 | 2.47e-12 | 71.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489360 | G7IYK2 | 82.618 | 489 | 7 | 3 | 1 | 411 | 1 | 489 | 0.0 | 804 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0366510 | Msa0489360 | 0.805977 | 1.028865e-49 | -8.615850e-47 |
| Msa0464310 | Msa0489360 | 0.801276 | 9.717398e-49 | -8.615850e-47 |
| Msa0347310 | Msa0489360 | 0.802523 | 5.389158e-49 | -8.615850e-47 |
| Msa0489360 | Msa1355340 | 0.800566 | 1.356913e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489360 | MtrunA17_Chr3g0079431 | 82.618 | 489 | 7 | 3 | 1 | 411 | 1 | 489 | 0.0 | 804 |
| Msa0489360 | MtrunA17_Chr3g0079441 | 75.560 | 491 | 40 | 4 | 1 | 411 | 1 | 491 | 0.0 | 719 |
| Msa0489360 | MtrunA17_Chr3g0079461 | 66.466 | 498 | 79 | 8 | 1 | 411 | 1 | 497 | 0.0 | 608 |
| Msa0489360 | MtrunA17_Chr3g0079451 | 66.026 | 468 | 77 | 5 | 26 | 411 | 6 | 473 | 0.0 | 601 |
| Msa0489360 | MtrunA17_Chr8g0382641 | 49.801 | 502 | 155 | 10 | 6 | 411 | 6 | 506 | 8.39e-167 | 477 |
| Msa0489360 | MtrunA17_Chr5g0425361 | 44.578 | 498 | 183 | 10 | 6 | 411 | 11 | 507 | 2.39e-141 | 412 |
| Msa0489360 | MtrunA17_Chr5g0425401 | 45.030 | 493 | 181 | 10 | 8 | 411 | 14 | 505 | 3.18e-141 | 412 |
| Msa0489360 | MtrunA17_Chr3g0123661 | 39.200 | 500 | 204 | 13 | 9 | 411 | 9 | 505 | 4.71e-108 | 328 |
| Msa0489360 | MtrunA17_Chr5g0425351 | 43.548 | 186 | 76 | 5 | 197 | 353 | 19 | 204 | 1.70e-41 | 145 |
| Msa0489360 | MtrunA17_Chr5g0425291 | 52.564 | 78 | 35 | 2 | 195 | 272 | 19 | 94 | 9.41e-21 | 86.3 |
| Msa0489360 | MtrunA17_Chr5g0425301 | 44.156 | 77 | 41 | 2 | 284 | 358 | 1 | 77 | 3.15e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 96 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATGATCACATAAGTATT+TGG | 0.123305 | 3_4:+9635041 | None:intergenic |
| CTATTATTTGAGCTTCTTAT+TGG | 0.155909 | 3_4:-9641414 | Msa0489360:CDS |
| GCTTACAAAGCTGTGAATTT+AGG | 0.195268 | 3_4:-9641356 | Msa0489360:CDS |
| AAGCATCAAATGGTCTATTT+TGG | 0.202544 | 3_4:-9639991 | Msa0489360:CDS |
| CAGATTATCAAGGCACAAAT+TGG | 0.214773 | 3_4:-9639281 | Msa0489360:CDS |
| CTTCTGGTTGGGAAACATTC+AGG | 0.224679 | 3_4:-9640287 | Msa0489360:CDS |
| TTCAGATTTATGTCACAAAA+TGG | 0.249547 | 3_4:-9639033 | Msa0489360:CDS |
| CAACATTTGGATGGGCCTAT+TGG | 0.262117 | 3_4:-9634619 | Msa0489360:CDS |
| ATGAAACATTTCAGATTATA+AGG | 0.262921 | 3_4:-9640045 | Msa0489360:CDS |
| GCCAACCGTGGTTCTGCTTC+TGG | 0.263236 | 3_4:-9640303 | Msa0489360:CDS |
| GTTTAGGTGGGTTTGGATCT+TGG | 0.275341 | 3_4:+9638971 | None:intergenic |
| TTTAGGTGGGTTTGGATCTT+GGG | 0.277322 | 3_4:+9638972 | None:intergenic |
| TTATAATCTGAAATGTTTCA+TGG | 0.319759 | 3_4:+9640047 | None:intergenic |
| ACATGATCACATAAGTATTT+GGG | 0.338303 | 3_4:+9635042 | None:intergenic |
| ACAAAAGGTTTAGGTGGGTT+TGG | 0.353332 | 3_4:+9638964 | None:intergenic |
| AAGCTGTGAATTTAGGAAAC+TGG | 0.354101 | 3_4:-9641349 | Msa0489360:CDS |
| TTGACATTTGTAGGCCCAAT+AGG | 0.354665 | 3_4:+9634604 | None:intergenic |
| AATTTGAATTTGCTACAATT+TGG | 0.358353 | 3_4:+9640080 | None:intergenic |
| AAGAAGCTCAAATAATAGTT+TGG | 0.360133 | 3_4:+9641419 | None:intergenic |
| CCGTGGTTCTGCTTCTGGTT+GGG | 0.360673 | 3_4:-9640298 | Msa0489360:CDS |
| AACATTTGGATGGGCCTATT+GGG | 0.362817 | 3_4:-9634618 | Msa0489360:CDS |
| ATGGTTATATTGACATTTGT+AGG | 0.369968 | 3_4:+9634595 | None:intergenic |
| GTTAAACACTCTAAAATTGA+AGG | 0.404716 | 3_4:+9640132 | None:intergenic |
| GTGTATTCTCATGCAACATT+TGG | 0.419146 | 3_4:-9634632 | Msa0489360:CDS |
| TGGCTCATTTGCAGCTTTGG+AGG | 0.420703 | 3_4:-9640168 | Msa0489360:intron |
| TTTGTGCTTGGACATATCTC+TGG | 0.424881 | 3_4:+9634660 | None:intergenic |
| TACCAACTTACTAATGGTTA+TGG | 0.434769 | 3_4:-9639201 | Msa0489360:CDS |
| ATGGAACCTTCTCGCTTTGA+CGG | 0.442568 | 3_4:-9641308 | Msa0489360:CDS |
| ACATATCTTTCCGCTGAAGA+TGG | 0.444863 | 3_4:-9640345 | Msa0489360:CDS |
| GCATTACTACAATATGTATT+CGG | 0.453344 | 3_4:-9634946 | Msa0489360:CDS |
| ACCGTGGTTCTGCTTCTGGT+TGG | 0.462630 | 3_4:-9640299 | Msa0489360:CDS |
| AACAAGAAATTTGTGGGGCA+AGG | 0.463143 | 3_4:-9640112 | Msa0489360:CDS |
| GGCTCATTTGCAGCTTTGGA+GGG | 0.466108 | 3_4:-9640167 | Msa0489360:intron |
| ACATAAGAAATGACAGAGCC+TGG | 0.466178 | 3_4:-9634884 | Msa0489360:CDS |
| TTCTGGTTGGGAAACATTCA+GGG | 0.470013 | 3_4:-9640286 | Msa0489360:intron |
| CATATCTTTCCGCTGAAGAT+GGG | 0.471301 | 3_4:-9640344 | Msa0489360:CDS |
| TGGGCTATCCACCATCCAAC+AGG | 0.479749 | 3_4:+9638991 | None:intergenic |
| GTGTTTAACAAGAAATTTGT+GGG | 0.481041 | 3_4:-9640118 | Msa0489360:CDS |
| CTCAAGTGGTTGATCGAGAA+TGG | 0.484613 | 3_4:-9634566 | Msa0489360:CDS |
| CTTCTTCTCTCATTTGTCAA+AGG | 0.486302 | 3_4:-9634993 | Msa0489360:CDS |
| ATTCGAATCAAAGCATCAAA+TGG | 0.491455 | 3_4:-9640001 | Msa0489360:CDS |
| TGTTTGCTTTGCAGGAGCAT+TGG | 0.492765 | 3_4:-9639080 | Msa0489360:intron |
| TGCCATAACCATTAGTAAGT+TGG | 0.494045 | 3_4:+9639199 | None:intergenic |
| AATTGTCAACAAAGATCTCT+TGG | 0.496005 | 3_4:-9641285 | Msa0489360:intron |
| ATGTATTCGGATAAATTCAA+TGG | 0.504587 | 3_4:-9634933 | Msa0489360:CDS |
| CACTTGACAATGCTTTCACA+TGG | 0.508127 | 3_4:-9638924 | Msa0489360:CDS |
| GAGATATGTCCAAGCACAAA+TGG | 0.509273 | 3_4:-9634657 | Msa0489360:CDS |
| ACAAATGTCAATATAACCAT+TGG | 0.510720 | 3_4:-9634592 | Msa0489360:CDS |
| GACAGAGCCTGGGATCTTAG+TGG | 0.512889 | 3_4:-9634873 | Msa0489360:CDS |
| GGAGAGTACCAACTTACTAA+TGG | 0.515314 | 3_4:-9639207 | Msa0489360:CDS |
| TTCTCATGCAACATTTGGAT+GGG | 0.516811 | 3_4:-9634627 | Msa0489360:CDS |
| ATTCTCATGCAACATTTGGA+TGG | 0.521384 | 3_4:-9634628 | Msa0489360:CDS |
| ACTGGCTTGTTGCTGAAGGA+TGG | 0.521485 | 3_4:-9641331 | Msa0489360:CDS |
| ACAATTGTAAACACATTACA+AGG | 0.521868 | 3_4:-9639228 | Msa0489360:CDS |
| AGTGTTTAACAAGAAATTTG+TGG | 0.525940 | 3_4:-9640119 | Msa0489360:CDS |
| TTTCTTACTCGCATAACTTG+AGG | 0.526026 | 3_4:+9639168 | None:intergenic |
| AGATTATCAAGGCACAAATT+GGG | 0.526125 | 3_4:-9639280 | Msa0489360:CDS |
| TGTGATCATGTCAAATCCAT+TGG | 0.526301 | 3_4:-9635030 | Msa0489360:CDS |
| AAATTTGTGGGGCAAGGAGA+AGG | 0.537779 | 3_4:-9640106 | Msa0489360:CDS |
| AATACACATCCATTTGTGCT+TGG | 0.540193 | 3_4:+9634648 | None:intergenic |
| TAGGGGAATGGACAGCTGAA+TGG | 0.542964 | 3_4:-9634712 | Msa0489360:CDS |
| ACAGCTGAATGGAGCATACA+AGG | 0.544710 | 3_4:-9634701 | Msa0489360:CDS |
| CCCCAACAAAAGGTTTAGGT+GGG | 0.545640 | 3_4:+9638959 | None:intergenic |
| GCTTGTTGCTGAAGGATGGA+TGG | 0.547369 | 3_4:-9641327 | Msa0489360:CDS |
| TACATAAAGCTCTAGATGCA+AGG | 0.548863 | 3_4:-9634542 | Msa0489360:exon |
| ACATAAAGCTCTAGATGCAA+GGG | 0.560146 | 3_4:-9634541 | Msa0489360:exon |
| GAGAAGAAGTTTAGAATCTG+TGG | 0.563821 | 3_4:+9635007 | None:intergenic |
| ATATCTTTCCGCTGAAGATG+GGG | 0.565840 | 3_4:-9640343 | Msa0489360:CDS |
| AGTTTAGAATCTGTGGCCAA+TGG | 0.566970 | 3_4:+9635014 | None:intergenic |
| GGAAACTGGCTTGTTGCTGA+AGG | 0.571457 | 3_4:-9641335 | Msa0489360:CDS |
| TGAAATGTTTCATGGTTGCT+AGG | 0.572223 | 3_4:+9640055 | None:intergenic |
| CTGTGAGGATACCTGTTGGA+TGG | 0.577394 | 3_4:-9639002 | Msa0489360:CDS |
| GTACTTGAGACTGTAATGGC+TGG | 0.584059 | 3_4:+9634506 | None:intergenic |
| AAGTGTACTTGAGACTGTAA+TGG | 0.584668 | 3_4:+9634502 | None:intergenic |
| TTGGGATGACAATGATCCAT+CGG | 0.585148 | 3_4:-9639262 | Msa0489360:CDS |
| ACCAGAAGCAGAACCACGGT+TGG | 0.601567 | 3_4:+9640302 | None:intergenic |
| ACAATTCCGTCAAAGCGAGA+AGG | 0.606902 | 3_4:+9641302 | None:intergenic |
| TCAGTGACTGCAGATTATCA+AGG | 0.606979 | 3_4:-9639291 | Msa0489360:CDS |
| TATCTCTGGTAGTCTTGCAT+AGG | 0.607680 | 3_4:+9634674 | None:intergenic |
| TATTGTAGTAATGCACATCA+AGG | 0.609097 | 3_4:+9634955 | None:intergenic |
| CATAAGAAATGACAGAGCCT+GGG | 0.612530 | 3_4:-9634883 | Msa0489360:CDS |
| TGAGGATACCTGTTGGATGG+TGG | 0.627765 | 3_4:-9638999 | Msa0489360:CDS |
| AGAGACACCACTAAGATCCC+AGG | 0.628976 | 3_4:+9634866 | None:intergenic |
| ATAACCATTGGAGTCTCAAG+TGG | 0.641339 | 3_4:-9634580 | Msa0489360:CDS |
| CCCAACCAGAAGCAGAACCA+CGG | 0.648810 | 3_4:+9640298 | None:intergenic |
| TAAGCAAACGAAAGAGAGTG+AGG | 0.651768 | 3_4:+9641374 | None:intergenic |
| GGGAAGCTTATGATGTTGTG+AGG | 0.655321 | 3_4:-9635073 | Msa0489360:intron |
| TATCTTTCCGCTGAAGATGG+GGG | 0.660568 | 3_4:-9640342 | Msa0489360:CDS |
| CATAAAGCTCTAGATGCAAG+GGG | 0.667900 | 3_4:-9634540 | Msa0489360:exon |
| TCAACCACTTGAGACTCCAA+TGG | 0.670774 | 3_4:+9634576 | None:intergenic |
| TGTTTAACAAGAAATTTGTG+GGG | 0.672700 | 3_4:-9640117 | Msa0489360:CDS |
| GATGCTGTGAGGATACCTGT+TGG | 0.677897 | 3_4:-9639006 | Msa0489360:CDS |
| GAGCTGATGAATGAGCCACT+AGG | 0.678883 | 3_4:-9635128 | Msa0489360:intron |
| ACTTGACAATGCTTTCACAT+GGG | 0.683824 | 3_4:-9638923 | Msa0489360:CDS |
| ACTACTATTGTAGCCAACCG+TGG | 0.699222 | 3_4:-9640315 | Msa0489360:CDS |
| AAAATGGATTAGATGCTGTG+AGG | 0.731300 | 3_4:-9639017 | Msa0489360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATAATTTATTTATAT+GGG | + | chr3_4:9634638-9634657 | None:intergenic | 0.0% |
| !! | AAATTTATAATTTATTTATA+TGG | + | chr3_4:9634639-9634658 | None:intergenic | 0.0% |
| !!! | ATTATTATTTTAAATAAAAT+TGG | - | chr3_4:9640089-9640108 | Msa0489360:CDS | 0.0% |
| !!! | TTATTATTTTAAATAAAATT+GGG | - | chr3_4:9640090-9640109 | Msa0489360:CDS | 0.0% |
| !! | AAATAATATTAATGATTTAC+TGG | - | chr3_4:9635091-9635110 | Msa0489360:intron | 10.0% |
| !! | ATTAATTATAGTAACATTAA+TGG | - | chr3_4:9640130-9640149 | Msa0489360:CDS | 10.0% |
| !!! | TCTAAAATGTCTTATAATTT+GGG | + | chr3_4:9634933-9634952 | None:intergenic | 15.0% |
| !!! | TTTTTTCAAATCCTTTATTA+AGG | + | chr3_4:9635030-9635049 | None:intergenic | 15.0% |
| !! | AAATACAATAATTCATGTAA+AGG | + | chr3_4:9635264-9635283 | None:intergenic | 15.0% |
| !!! | ACATTGTTTGATTTATAAAT+TGG | + | chr3_4:9635406-9635425 | None:intergenic | 15.0% |
| !!! | ATCAAGGAATTTTTTTTTTA+AGG | - | chr3_4:9635641-9635660 | Msa0489360:intron | 15.0% |
| !!! | TTTTTTTAAGGAATATATCA+AGG | - | chr3_4:9635653-9635672 | Msa0489360:intron | 15.0% |
| !!! | GTAACTTGATTTAAAATAAT+TGG | + | chr3_4:9636023-9636042 | None:intergenic | 15.0% |
| !!! | TAATTTTCTATCAATCTTTT+TGG | - | chr3_4:9636138-9636157 | Msa0489360:intron | 15.0% |
| !!! | AGTTTTTTGATAAAAATCAA+AGG | + | chr3_4:9638342-9638361 | None:intergenic | 15.0% |
| !! | TGAAAATAATAATTGGTTAT+AGG | + | chr3_4:9638578-9638597 | None:intergenic | 15.0% |
| !! | AGATATCATATTATATATTG+AGG | - | chr3_4:9641123-9641142 | Msa0489360:intron | 15.0% |
| !!! | TGTTTTTACTTTTCTATTTT+TGG | - | chr3_4:9641155-9641174 | Msa0489360:intron | 15.0% |
| !!! | CATACTATTAGTTTTTATTG+AGG | - | chr3_4:9634759-9634778 | Msa0489360:intron | 20.0% |
| !! | CTAATAATTATTTCATCCTT+TGG | - | chr3_4:9634874-9634893 | Msa0489360:CDS | 20.0% |
| !!! | GTCTAAAATGTCTTATAATT+TGG | + | chr3_4:9634934-9634953 | None:intergenic | 20.0% |
| !! | TGCAAAATTATCCTTAATAA+AGG | - | chr3_4:9635016-9635035 | Msa0489360:CDS | 20.0% |
| !! | AAAGATAGAGAGTAATAAAT+AGG | - | chr3_4:9635051-9635070 | Msa0489360:CDS | 20.0% |
| !!! | TAAATAGGTAAAGGTATAAT+AGG | - | chr3_4:9635066-9635085 | Msa0489360:CDS | 20.0% |
| !! | ATATTAATGATTTACTGGTA+TGG | - | chr3_4:9635096-9635115 | Msa0489360:intron | 20.0% |
| !! | AAACGACATATAATTTAAGA+CGG | - | chr3_4:9635155-9635174 | Msa0489360:CDS | 20.0% |
| !!! | ACAAATGAGATACAAATTTT+TGG | - | chr3_4:9635212-9635231 | Msa0489360:intron | 20.0% |
| !! | TTGATTTATAAATTGGTCAT+GGG | + | chr3_4:9635399-9635418 | None:intergenic | 20.0% |
| !!! | TTTGATTTATAAATTGGTCA+TGG | + | chr3_4:9635400-9635419 | None:intergenic | 20.0% |
| !! | TCACATATCAAAACTTAATA+AGG | + | chr3_4:9635477-9635496 | None:intergenic | 20.0% |
| !!! | TTTTGATATGTGATGATTTT+AGG | - | chr3_4:9635484-9635503 | Msa0489360:intron | 20.0% |
| !! | GGTAAGTTATTTATATATCA+AGG | - | chr3_4:9635625-9635644 | Msa0489360:intron | 20.0% |
| !!! | ACTTGATAAGTTCTAATTAT+TGG | - | chr3_4:9635702-9635721 | Msa0489360:intron | 20.0% |
| !!! | AATTTGAATTTGCTACAATT+TGG | + | chr3_4:9635813-9635832 | None:intergenic | 20.0% |
| !!! | TTATAATCTGAAATGTTTCA+TGG | + | chr3_4:9635846-9635865 | None:intergenic | 20.0% |
| !! | ATGAAACATTTCAGATTATA+AGG | - | chr3_4:9635845-9635864 | Msa0489360:intron | 20.0% |
| !! | GATTTAAATTGAATAGCTTA+AGG | + | chr3_4:9635941-9635960 | None:intergenic | 20.0% |
| !!! | ATACTCTGAAAAAATTACAT+TGG | - | chr3_4:9636065-9636084 | Msa0489360:intron | 20.0% |
| !! | ATGAATTTGGTTATGAATTT+AGG | - | chr3_4:9637068-9637087 | Msa0489360:intron | 20.0% |
| !! | TGAATTTGGTTATGAATTTA+GGG | - | chr3_4:9637069-9637088 | Msa0489360:intron | 20.0% |
| !! | AAATTGGAAACTTGAATTAA+GGG | + | chr3_4:9637352-9637371 | None:intergenic | 20.0% |
| !! | ATAAAGTTCCTGAATAAATA+TGG | + | chr3_4:9637587-9637606 | None:intergenic | 20.0% |
| !! | ATGAATTTAGTAAGAAGATT+TGG | + | chr3_4:9637952-9637971 | None:intergenic | 20.0% |
| !!! | TTTGACAAAGAAAAGATTTT+GGG | + | chr3_4:9638163-9638182 | None:intergenic | 20.0% |
| !!! | ATTTGACAAAGAAAAGATTT+TGG | + | chr3_4:9638164-9638183 | None:intergenic | 20.0% |
| !!! | CTTTAAAAAATTATCCTTCA+TGG | - | chr3_4:9638360-9638379 | Msa0489360:intron | 20.0% |
| !! | ACATGACTGAAAATAATAAT+TGG | + | chr3_4:9638585-9638604 | None:intergenic | 20.0% |
| !!! | AATAACAAAGGTACTAAAAA+AGG | + | chr3_4:9638874-9638893 | None:intergenic | 20.0% |
| !! | ATTTACAACATTGATCAATT+TGG | - | chr3_4:9639197-9639216 | Msa0489360:CDS | 20.0% |
| !!! | ATGATTTTGGTTATGAATTT+AGG | - | chr3_4:9639761-9639780 | Msa0489360:intron | 20.0% |
| !!! | TGATTTTGGTTATGAATTTA+GGG | - | chr3_4:9639762-9639781 | Msa0489360:intron | 20.0% |
| !! | TTTAAATAAAATTGGGTTTG+AGG | - | chr3_4:9640097-9640116 | Msa0489360:CDS | 20.0% |
| !! | TTAAATAAAATTGGGTTTGA+GGG | - | chr3_4:9640098-9640117 | Msa0489360:CDS | 20.0% |
| !!! | GGTTAACAAAGTTTTAAATA+AGG | + | chr3_4:9640654-9640673 | None:intergenic | 20.0% |
| !! | CAATATAGTTAACTATCATT+GGG | + | chr3_4:9641092-9641111 | None:intergenic | 20.0% |
| !! | TCAATATAGTTAACTATCAT+TGG | + | chr3_4:9641093-9641112 | None:intergenic | 20.0% |
| !!! | TTTACTTTTCTATTTTTGGT+AGG | - | chr3_4:9641159-9641178 | Msa0489360:intron | 20.0% |
| !!! | TTACTTTTCTATTTTTGGTA+GGG | - | chr3_4:9641160-9641179 | Msa0489360:intron | 20.0% |
| ! | AAGAAGCTCAAATAATAGTT+TGG | + | chr3_4:9634474-9634493 | None:intergenic | 25.0% |
| ! | CTATTATTTGAGCTTCTTAT+TGG | - | chr3_4:9634476-9634495 | Msa0489360:three_prime_UTR | 25.0% |
| ! | GAGAAAATCAAACATTTCAA+AGG | + | chr3_4:9634737-9634756 | None:intergenic | 25.0% |
| ! | ATAATTATTTCATCCTTTGG+AGG | - | chr3_4:9634877-9634896 | Msa0489360:CDS | 25.0% |
| ! | TAATTATTTCATCCTTTGGA+GGG | - | chr3_4:9634878-9634897 | Msa0489360:CDS | 25.0% |
| ! | AGGAAAAAGATATTATGAGT+TGG | - | chr3_4:9634991-9635010 | Msa0489360:CDS | 25.0% |
| ! | AGAGAGTAATAAATAGGTAA+AGG | - | chr3_4:9635057-9635076 | Msa0489360:CDS | 25.0% |
| ! | CAGACTCTTAAAAAATATGA+GGG | + | chr3_4:9635293-9635312 | None:intergenic | 25.0% |
| ! | ACAGACTCTTAAAAAATATG+AGG | + | chr3_4:9635294-9635313 | None:intergenic | 25.0% |
| !!! | CATATTTTTTAAGAGTCTGT+AGG | - | chr3_4:9635294-9635313 | Msa0489360:intron | 25.0% |
| !!! | GTTAAACACTCTAAAATTGA+AGG | + | chr3_4:9635761-9635780 | None:intergenic | 25.0% |
| ! | AGTGTTTAACAAGAAATTTG+TGG | - | chr3_4:9635771-9635790 | Msa0489360:intron | 25.0% |
| ! | GTGTTTAACAAGAAATTTGT+GGG | - | chr3_4:9635772-9635791 | Msa0489360:intron | 25.0% |
| ! | TGTTTAACAAGAAATTTGTG+GGG | - | chr3_4:9635773-9635792 | Msa0489360:intron | 25.0% |
| ! | TAAATTGAATAGCTTAAGGA+TGG | + | chr3_4:9635937-9635956 | None:intergenic | 25.0% |
| !!! | ATTACATTGGTCTCATATTT+TGG | - | chr3_4:9636078-9636097 | Msa0489360:intron | 25.0% |
| !!! | TTTCTATCAATCTTTTTGGT+TGG | - | chr3_4:9636142-9636161 | Msa0489360:intron | 25.0% |
| !!! | TTTAGTTTGTGATTTTACCA+TGG | - | chr3_4:9636203-9636222 | Msa0489360:intron | 25.0% |
| ! | TCTACATAAGTGTTTATAAG+TGG | + | chr3_4:9636274-9636293 | None:intergenic | 25.0% |
| ! | AGGATTAATAACTAAAGTCT+TGG | + | chr3_4:9636545-9636564 | None:intergenic | 25.0% |
| ! | ATTGTAATATGAAAAACCGA+TGG | + | chr3_4:9636647-9636666 | None:intergenic | 25.0% |
| ! | ACAATTGTAAACACATTACA+AGG | - | chr3_4:9636662-9636681 | Msa0489360:intron | 25.0% |
| !!! | AAATAGTAAACTTGCTAGAT+TGG | - | chr3_4:9636765-9636784 | Msa0489360:intron | 25.0% |
| ! | TTCAGATTTATGTCACAAAA+TGG | - | chr3_4:9636857-9636876 | Msa0489360:intron | 25.0% |
| ! | TCTAATTCAAGCAATGAATT+TGG | - | chr3_4:9637055-9637074 | Msa0489360:intron | 25.0% |
| !! | AACAAACTTTTATACCCTAA+AGG | - | chr3_4:9637264-9637283 | Msa0489360:intron | 25.0% |
| !! | ACAAACTTTTATACCCTAAA+GGG | - | chr3_4:9637265-9637284 | Msa0489360:intron | 25.0% |
| ! | GGTATATATTATACCCTTTA+GGG | + | chr3_4:9637281-9637300 | None:intergenic | 25.0% |
| ! | TATTAGACTATATACACGTT+GGG | + | chr3_4:9637303-9637322 | None:intergenic | 25.0% |
| ! | GAAATTGGAAACTTGAATTA+AGG | + | chr3_4:9637353-9637372 | None:intergenic | 25.0% |
| ! | CTTCAAATTTAACATACTTC+CGG | - | chr3_4:9637686-9637705 | Msa0489360:intron | 25.0% |
| !!! | ATTAAGATTTTGAGAACTGA+TGG | + | chr3_4:9637845-9637864 | None:intergenic | 25.0% |
| ! | CTTTGTCAAATAAATGATTG+AGG | - | chr3_4:9638173-9638192 | Msa0489360:intron | 25.0% |
| !!! | GATTGAGGTTTCTAAAATTT+AGG | - | chr3_4:9638188-9638207 | Msa0489360:intron | 25.0% |
| ! | CTATGAATAAAAAAGGTAGA+TGG | + | chr3_4:9638237-9638256 | None:intergenic | 25.0% |
| ! | TCTGCTACTATGAATAAAAA+AGG | + | chr3_4:9638244-9638263 | None:intergenic | 25.0% |
| ! | GAAAGATGGTTCTTAAATAA+TGG | + | chr3_4:9638619-9638638 | None:intergenic | 25.0% |
| ! | TCTTATCAAAACAAGAAGAA+AGG | + | chr3_4:9638829-9638848 | None:intergenic | 25.0% |
| ! | AAAGGAAAGAATAACTCTAA+GGG | + | chr3_4:9638916-9638935 | None:intergenic | 25.0% |
| !!! | TTCAAGGTTTGATTTTATTG+TGG | + | chr3_4:9639109-9639128 | None:intergenic | 25.0% |
| ! | TTATGAGAACTTTATCTTCA+AGG | + | chr3_4:9639125-9639144 | None:intergenic | 25.0% |
| ! | AAAGTTTGAATTGATGCAAA+TGG | + | chr3_4:9639253-9639272 | None:intergenic | 25.0% |
| !!! | AAACTGTTTTTTTCCATTCA+TGG | - | chr3_4:9639612-9639631 | Msa0489360:intron | 25.0% |
| ! | ATATAGAAATTGAGAGAAGA+AGG | - | chr3_4:9639793-9639812 | Msa0489360:intron | 25.0% |
| ! | TATAGAAATTGAGAGAAGAA+GGG | - | chr3_4:9639794-9639813 | Msa0489360:intron | 25.0% |
| ! | GGTATATATTATACCTGTTA+GGG | + | chr3_4:9639981-9640000 | None:intergenic | 25.0% |
| ! | TATTAGACTATATACCTGTT+GGG | + | chr3_4:9640003-9640022 | None:intergenic | 25.0% |
| ! | AAATTGAATGTTGCACAAAA+GGG | + | chr3_4:9640060-9640079 | None:intergenic | 25.0% |
| ! | TAAATTGAATGTTGCACAAA+AGG | + | chr3_4:9640061-9640080 | None:intergenic | 25.0% |
| ! | TCATAGAATTCTTAGCAAAA+AGG | - | chr3_4:9640356-9640375 | Msa0489360:intron | 25.0% |
| ! | ATAAAGTTGTGAGATTCATA+TGG | + | chr3_4:9640490-9640509 | None:intergenic | 25.0% |
| ! | GATATATCAAACATTGGAAA+TGG | + | chr3_4:9640520-9640539 | None:intergenic | 25.0% |
| ! | TACAGTCATAGAAAAAGTTT+AGG | - | chr3_4:9640732-9640751 | Msa0489360:intron | 25.0% |
| ! | ACATGATCACATAAGTATTT+GGG | + | chr3_4:9640851-9640870 | None:intergenic | 25.0% |
| ! | GCATTACTACAATATGTATT+CGG | - | chr3_4:9640944-9640963 | Msa0489360:intron | 25.0% |
| ! | ATGTATTCGGATAAATTCAA+TGG | - | chr3_4:9640957-9640976 | Msa0489360:intron | 25.0% |
| !!! | TACTTTTCTATTTTTGGTAG+GGG | - | chr3_4:9641161-9641180 | Msa0489360:intron | 25.0% |
| ! | ATGGTTATATTGACATTTGT+AGG | + | chr3_4:9641298-9641317 | None:intergenic | 25.0% |
| ! | ACAAATGTCAATATAACCAT+TGG | - | chr3_4:9641298-9641317 | Msa0489360:CDS | 25.0% |
| AATTGTCAACAAAGATCTCT+TGG | - | chr3_4:9634605-9634624 | Msa0489360:CDS | 30.0% | |
| AGTTAGGATGATTGTATTAG+TGG | + | chr3_4:9634837-9634856 | None:intergenic | 30.0% | |
| GTAGTTAGATTAGATGAGTT+AGG | + | chr3_4:9634853-9634872 | None:intergenic | 30.0% | |
| ! | AATTATTTCATCCTTTGGAG+GGG | - | chr3_4:9634879-9634898 | Msa0489360:CDS | 30.0% |
| ! | ATGTCTTATAATTTGGGACT+GGG | + | chr3_4:9634927-9634946 | None:intergenic | 30.0% |
| ! | AATGTCTTATAATTTGGGAC+TGG | + | chr3_4:9634928-9634947 | None:intergenic | 30.0% |
| ! | GACATATAATTTAAGACGGA+GGG | - | chr3_4:9635159-9635178 | Msa0489360:intron | 30.0% |
| !! | GATATGTGATGATTTTAGGA+TGG | - | chr3_4:9635488-9635507 | Msa0489360:intron | 30.0% |
| !! | TGCTTTGATTCGAATTTTGA+GGG | + | chr3_4:9635884-9635903 | None:intergenic | 30.0% |
| !! | ATGCTTTGATTCGAATTTTG+AGG | + | chr3_4:9635885-9635904 | None:intergenic | 30.0% |
| ! | ATTCGAATCAAAGCATCAAA+TGG | - | chr3_4:9635889-9635908 | Msa0489360:intron | 30.0% |
| ! | AAGCATCAAATGGTCTATTT+TGG | - | chr3_4:9635899-9635918 | Msa0489360:intron | 30.0% |
| CTCTTTACTGTAAAGAATGT+TGG | + | chr3_4:9636309-9636328 | None:intergenic | 30.0% | |
| CAACATTCTTTACAGTAAAG+AGG | - | chr3_4:9636307-9636326 | Msa0489360:intron | 30.0% | |
| ! | GAAATGGATTCTACATAAAG+TGG | - | chr3_4:9636413-9636432 | Msa0489360:intron | 30.0% |
| ! | CTAATATTCGCTCTTTTGTT+GGG | + | chr3_4:9636458-9636477 | None:intergenic | 30.0% |
| ! | TCTAATATTCGCTCTTTTGT+TGG | + | chr3_4:9636459-9636478 | None:intergenic | 30.0% |
| AGATTATCAAGGCACAAATT+GGG | - | chr3_4:9636610-9636629 | Msa0489360:intron | 30.0% | |
| TACCAACTTACTAATGGTTA+TGG | - | chr3_4:9636689-9636708 | Msa0489360:intron | 30.0% | |
| TACAACATGCCTTATATAAG+AGG | - | chr3_4:9637166-9637185 | Msa0489360:intron | 30.0% | |
| GTGAATAAGCCTCTTATATA+AGG | + | chr3_4:9637178-9637197 | None:intergenic | 30.0% | |
| !! | AAGTTTGTTGCAAGATAGTT+AGG | + | chr3_4:9637253-9637272 | None:intergenic | 30.0% |
| GGGTATATATTATACCCTTT+AGG | + | chr3_4:9637282-9637301 | None:intergenic | 30.0% | |
| ATTAGACTATATACACGTTG+GGG | + | chr3_4:9637302-9637321 | None:intergenic | 30.0% | |
| GTATTAGACTATATACACGT+TGG | + | chr3_4:9637304-9637323 | None:intergenic | 30.0% | |
| CTTGATTGGAATGATGAAAT+TGG | + | chr3_4:9637368-9637387 | None:intergenic | 30.0% | |
| CTAAGGCAATTAAGATTGAA+AGG | + | chr3_4:9637408-9637427 | None:intergenic | 30.0% | |
| GTTCCTGAATAAATATGGAT+GGG | + | chr3_4:9637582-9637601 | None:intergenic | 30.0% | |
| AGTTCCTGAATAAATATGGA+TGG | + | chr3_4:9637583-9637602 | None:intergenic | 30.0% | |
| ! | CTGCAACATACATTTTGAAT+AGG | + | chr3_4:9637629-9637648 | None:intergenic | 30.0% |
| AATATGCCAAATACTTTCTG+GGG | + | chr3_4:9637666-9637685 | None:intergenic | 30.0% | |
| GAATATGCCAAATACTTTCT+GGG | + | chr3_4:9637667-9637686 | None:intergenic | 30.0% | |
| AGAATATGCCAAATACTTTC+TGG | + | chr3_4:9637668-9637687 | None:intergenic | 30.0% | |
| GAAATAGAACATTGTTTGAC+AGG | + | chr3_4:9637713-9637732 | None:intergenic | 30.0% | |
| GTCTTAGTAGAAAAGAAAAG+TGG | + | chr3_4:9637875-9637894 | None:intergenic | 30.0% | |
| ! | CGAATATTTCATCAGTTTTG+TGG | + | chr3_4:9637975-9637994 | None:intergenic | 30.0% |
| TTAGATTTGAATGCAGCTTT+AGG | - | chr3_4:9638079-9638098 | Msa0489360:intron | 30.0% | |
| ! | TTGGTAATACTTGCTTGATA+GGG | + | chr3_4:9638111-9638130 | None:intergenic | 30.0% |
| AACTTTCATATCAGTCTGAA+AGG | - | chr3_4:9638282-9638301 | Msa0489360:intron | 30.0% | |
| AAAGGTTCTATTCTTTGCAA+GGG | - | chr3_4:9638300-9638319 | Msa0489360:intron | 30.0% | |
| ATAGCTATTGAAGGAAAGAA+CGG | + | chr3_4:9638481-9638500 | None:intergenic | 30.0% | |
| TGCTATAATTGTGAGAAGTT+TGG | + | chr3_4:9638784-9638803 | None:intergenic | 30.0% | |
| !! | GAAAGGTTTTGATAAGAAGA+AGG | + | chr3_4:9638812-9638831 | None:intergenic | 30.0% |
| TGGTCAAAAGGAAATAACAA+AGG | + | chr3_4:9638886-9638905 | None:intergenic | 30.0% | |
| GAAAGGAAAGAATAACTCTA+AGG | + | chr3_4:9638917-9638936 | None:intergenic | 30.0% | |
| GATAAGAAGAACTTCAAGAA+AGG | + | chr3_4:9638934-9638953 | None:intergenic | 30.0% | |
| TGAAGAATTGCAAAGTTCTT+TGG | + | chr3_4:9639046-9639065 | None:intergenic | 30.0% | |
| TTGCAATTCTTCAATCTTCA+AGG | - | chr3_4:9639053-9639072 | Msa0489360:CDS | 30.0% | |
| !! | CACATCTTTTGATTCTTGTA+TGG | - | chr3_4:9639080-9639099 | Msa0489360:intron | 30.0% |
| !! | AAGGTTTGATTTTATTGTGG+TGG | + | chr3_4:9639106-9639125 | None:intergenic | 30.0% |
| GTAAATCAGATGAAATCTTG+TGG | + | chr3_4:9639183-9639202 | None:intergenic | 30.0% | |
| ATTCAACAAAGTGTAGATTC+AGG | + | chr3_4:9639390-9639409 | None:intergenic | 30.0% | |
| ATCTACACTTTGTTGAATGA+AGG | - | chr3_4:9639392-9639411 | Msa0489360:intron | 30.0% | |
| TTGTTGGAAATTGTGCAAAA+CGG | + | chr3_4:9639510-9639529 | None:intergenic | 30.0% | |
| ! | AATGATGAAGAACTTGTTTG+TGG | + | chr3_4:9639541-9639560 | None:intergenic | 30.0% |
| ACACTTGAAAATGGAAACTA+GGG | + | chr3_4:9639576-9639595 | None:intergenic | 30.0% | |
| AACACTTGAAAATGGAAACT+AGG | + | chr3_4:9639577-9639596 | None:intergenic | 30.0% | |
| !!! | TAGTTTCCATTTTCAAGTGT+TGG | - | chr3_4:9639576-9639595 | Msa0489360:intron | 30.0% |
| AATCAATGTCTAGAAACGTT+GGG | + | chr3_4:9639645-9639664 | None:intergenic | 30.0% | |
| TAATCAATGTCTAGAAACGT+TGG | + | chr3_4:9639646-9639665 | None:intergenic | 30.0% | |
| ! | TCTAATGCAAGCAATGATTT+TGG | - | chr3_4:9639748-9639767 | Msa0489360:intron | 30.0% |
| ATAGAAATTGAGAGAAGAAG+GGG | - | chr3_4:9639795-9639814 | Msa0489360:intron | 30.0% | |
| TAAAGCATGCCTTATATAAG+AGG | - | chr3_4:9639866-9639885 | Msa0489360:intron | 30.0% | |
| GTGAATAAGCCTCTTATATA+AGG | + | chr3_4:9637178-9637197 | None:intergenic | 30.0% | |
| ! | ACAAACTTTTATACCCTAAC+AGG | - | chr3_4:9639965-9639984 | Msa0489360:intron | 30.0% |
| GGGTATATATTATACCTGTT+AGG | + | chr3_4:9639982-9640001 | None:intergenic | 30.0% | |
| ATTAGACTATATACCTGTTG+GGG | + | chr3_4:9640002-9640021 | None:intergenic | 30.0% | |
| GTATTAGACTATATACCTGT+TGG | + | chr3_4:9640004-9640023 | None:intergenic | 30.0% | |
| ! | TTTATAACTTGCAGTAAGCA+TGG | - | chr3_4:9640214-9640233 | Msa0489360:intron | 30.0% |
| ! | TTATAACTTGCAGTAAGCAT+GGG | - | chr3_4:9640215-9640234 | Msa0489360:intron | 30.0% |
| !!! | AAAATGGTTTTGAGCATAGT+GGG | - | chr3_4:9640278-9640297 | Msa0489360:intron | 30.0% |
| AAGAGATGGATATACAGAAT+GGG | - | chr3_4:9640303-9640322 | Msa0489360:CDS | 30.0% | |
| TGTTCTTAACATTCTGTCTA+AGG | + | chr3_4:9640418-9640437 | None:intergenic | 30.0% | |
| CATGTGGATATATCAAACAT+TGG | + | chr3_4:9640526-9640545 | None:intergenic | 30.0% | |
| CAATGTTTGATATATCCACA+TGG | - | chr3_4:9640524-9640543 | Msa0489360:intron | 30.0% | |
| ! | TTTCGAGTAGGTAATTCATT+TGG | + | chr3_4:9640675-9640694 | None:intergenic | 30.0% |
| ! | TAAAGAAATCAGTTTCGAGT+AGG | + | chr3_4:9640687-9640706 | None:intergenic | 30.0% |
| AGTCATAGAAAAAGTTTAGG+AGG | - | chr3_4:9640735-9640754 | Msa0489360:intron | 30.0% | |
| GACATGATCACATAAGTATT+TGG | + | chr3_4:9640852-9640871 | None:intergenic | 30.0% | |
| TATTGTAGTAATGCACATCA+AGG | + | chr3_4:9640938-9640957 | None:intergenic | 30.0% | |
| !!! | TCAAATGCTCTTAGTTTTGT+AGG | - | chr3_4:9641050-9641069 | Msa0489360:intron | 30.0% |
| ATAGTTAACTATCATTGGGA+AGG | + | chr3_4:9641088-9641107 | None:intergenic | 30.0% | |
| GCTTACAAAGCTGTGAATTT+AGG | - | chr3_4:9634534-9634553 | Msa0489360:exon | 35.0% | |
| AAGCTGTGAATTTAGGAAAC+TGG | - | chr3_4:9634541-9634560 | Msa0489360:exon | 35.0% | |
| ! | CGACATATAATTTAAGACGG+AGG | - | chr3_4:9635158-9635177 | Msa0489360:intron | 35.0% |
| TAGGACAAAAAGTTTGCCAT+GGG | - | chr3_4:9635313-9635332 | Msa0489360:intron | 35.0% | |
| TTATAAATTGGTCATGGGAC+TGG | + | chr3_4:9635394-9635413 | None:intergenic | 35.0% | |
| TGAAATGTTTCATGGTTGCT+AGG | + | chr3_4:9635838-9635857 | None:intergenic | 35.0% | |
| !! | GCTTTGATTCGAATTTTGAG+GGG | + | chr3_4:9635883-9635902 | None:intergenic | 35.0% |
| !! | CATCAAATGGTCTATTTTGG+CGG | - | chr3_4:9635902-9635921 | Msa0489360:intron | 35.0% |
| !!! | ATCAAATGGTCTATTTTGGC+GGG | - | chr3_4:9635903-9635922 | Msa0489360:intron | 35.0% |
| GATTATTGCACATAGCCAAT+TGG | - | chr3_4:9636164-9636183 | Msa0489360:intron | 35.0% | |
| ! | GATTTTACCATGGAAACTCA+TGG | - | chr3_4:9636213-9636232 | Msa0489360:intron | 35.0% |
| ! | TTTTTGACCATGAGTTTCCA+TGG | + | chr3_4:9636223-9636242 | None:intergenic | 35.0% |
| ATGGAAACTCATGGTCAAAA+AGG | - | chr3_4:9636222-9636241 | Msa0489360:intron | 35.0% | |
| TGAGTCTCACACTTAAGAAA+TGG | - | chr3_4:9636397-9636416 | Msa0489360:intron | 35.0% | |
| CCTTCACACATATATGATCA+AGG | + | chr3_4:9636565-9636584 | None:intergenic | 35.0% | |
| CCTTGATCATATATGTGTGA+AGG | - | chr3_4:9636562-9636581 | Msa0489360:intron | 35.0% | |
| CAGATTATCAAGGCACAAAT+TGG | - | chr3_4:9636609-9636628 | Msa0489360:intron | 35.0% | |
| TGCCATAACCATTAGTAAGT+TGG | + | chr3_4:9636694-9636713 | None:intergenic | 35.0% | |
| TTTCTTACTCGCATAACTTG+AGG | + | chr3_4:9636725-9636744 | None:intergenic | 35.0% | |
| ! | TTGAACTTTGTTTGCTTTGC+AGG | - | chr3_4:9636802-9636821 | Msa0489360:intron | 35.0% |
| !! | AAAATGGATTAGATGCTGTG+AGG | - | chr3_4:9636873-9636892 | Msa0489360:intron | 35.0% |
| ACTTGACAATGCTTTCACAT+GGG | - | chr3_4:9636967-9636986 | Msa0489360:intron | 35.0% | |
| ! | TTAGGGTTTGAAATTGAGAG+AGG | - | chr3_4:9637086-9637105 | Msa0489360:intron | 35.0% |
| TTGGAAACTTGAATTAAGGG+AGG | + | chr3_4:9637349-9637368 | None:intergenic | 35.0% | |
| AACAAGCTTAGGAACTTGAT+TGG | + | chr3_4:9637382-9637401 | None:intergenic | 35.0% | |
| TTGAAAGGTTCAACAAGCTT+AGG | + | chr3_4:9637393-9637412 | None:intergenic | 35.0% | |
| GGGATTTGAAGATTGTTCAT+TGG | + | chr3_4:9637462-9637481 | None:intergenic | 35.0% | |
| TAGGGAACAAGTAAACAAAG+GGG | + | chr3_4:9637482-9637501 | None:intergenic | 35.0% | |
| CTAGGGAACAAGTAAACAAA+GGG | + | chr3_4:9637483-9637502 | None:intergenic | 35.0% | |
| CTGATGCTAAAAGAAAGCTA+GGG | + | chr3_4:9637500-9637519 | None:intergenic | 35.0% | |
| GCTAAACATTTGAGAGTCTT+TGG | + | chr3_4:9637546-9637565 | None:intergenic | 35.0% | |
| CTGAATAAATATGGATGGGA+AGG | + | chr3_4:9637578-9637597 | None:intergenic | 35.0% | |
| CTTCCCATCCATATTTATTC+AGG | - | chr3_4:9637576-9637595 | Msa0489360:intron | 35.0% | |
| TTAGCTAATCCATTGTGTTG+TGG | - | chr3_4:9637738-9637757 | Msa0489360:intron | 35.0% | |
| ! | TGGTGGAGATTTTACTTCAA+AGG | + | chr3_4:9637822-9637841 | None:intergenic | 35.0% |
| !! | AAGATTTTGAGAACTGATGG+TGG | + | chr3_4:9637842-9637861 | None:intergenic | 35.0% |
| GTAGTGTATTCTGATGTATG+TGG | + | chr3_4:9638028-9638047 | None:intergenic | 35.0% | |
| !! | GTTGGTAATACTTGCTTGAT+AGG | + | chr3_4:9638112-9638131 | None:intergenic | 35.0% |
| CAAGTATTACCAACCTGATT+TGG | - | chr3_4:9638118-9638137 | Msa0489360:intron | 35.0% | |
| ! | TAAGTTGGATACACCAAATC+AGG | + | chr3_4:9638134-9638153 | None:intergenic | 35.0% |
| !! | TGATTTGGTGTATCCAACTT+AGG | - | chr3_4:9638133-9638152 | Msa0489360:intron | 35.0% |
| GAAAGGTTCTATTCTTTGCA+AGG | - | chr3_4:9638299-9638318 | Msa0489360:intron | 35.0% | |
| ATGGGAAAGATAGCTATTGA+AGG | + | chr3_4:9638490-9638509 | None:intergenic | 35.0% | |
| TGCAACTAGTGTTCTATGAT+CGG | - | chr3_4:9638516-9638535 | Msa0489360:intron | 35.0% | |
| ! | TTAACTTTTGCATTCTTCCC+AGG | - | chr3_4:9638544-9638563 | Msa0489360:intron | 35.0% |
| GGTTATAGGAAATTGATCCT+GGG | + | chr3_4:9638564-9638583 | None:intergenic | 35.0% | |
| TGGTTATAGGAAATTGATCC+TGG | + | chr3_4:9638565-9638584 | None:intergenic | 35.0% | |
| AGAGATGCAATTCAGAAAGA+TGG | + | chr3_4:9638633-9638652 | None:intergenic | 35.0% | |
| TTCTGACACAGTTCAATTGA+TGG | + | chr3_4:9638674-9638693 | None:intergenic | 35.0% | |
| CTGAATGTTGGTATGGTAAA+GGG | + | chr3_4:9638750-9638769 | None:intergenic | 35.0% | |
| TCTGAATGTTGGTATGGTAA+AGG | + | chr3_4:9638751-9638770 | None:intergenic | 35.0% | |
| TATGCTTCTGAATGTTGGTA+TGG | + | chr3_4:9638757-9638776 | None:intergenic | 35.0% | |
| ! | AACTTGAAGTGCTTGTTGAA+TGG | - | chr3_4:9638978-9638997 | Msa0489360:CDS | 35.0% |
| GTATCATGAAGGTGATGTTT+AGG | + | chr3_4:9639307-9639326 | None:intergenic | 35.0% | |
| !! | GTTCTTGAAAGGTATCATGA+AGG | + | chr3_4:9639318-9639337 | None:intergenic | 35.0% |
| AAAATCCACAAAGTCTAAGG+AGG | + | chr3_4:9639349-9639368 | None:intergenic | 35.0% | |
| CTCAAAATCCACAAAGTCTA+AGG | + | chr3_4:9639352-9639371 | None:intergenic | 35.0% | |
| ACAGAAGAAGAAGAAGAAGA+AGG | + | chr3_4:9639433-9639452 | None:intergenic | 35.0% | |
| CAAAACGGTTATGATGAGTT+GGG | + | chr3_4:9639495-9639514 | None:intergenic | 35.0% | |
| AAAATGGAAACTAGGGAAGA+TGG | + | chr3_4:9639569-9639588 | None:intergenic | 35.0% | |
| CATCTTCCAACACTTGAAAA+TGG | + | chr3_4:9639585-9639604 | None:intergenic | 35.0% | |
| GGTATAATATATACCCCAAC+AGG | - | chr3_4:9637286-9637305 | Msa0489360:intron | 35.0% | |
| GTACATAATTCAAATCCGCT+CGG | + | chr3_4:9640176-9640195 | None:intergenic | 35.0% | |
| !!! | CAAAATGGTTTTGAGCATAG+TGG | - | chr3_4:9640277-9640296 | Msa0489360:intron | 35.0% |
| CAAGAGATGGATATACAGAA+TGG | - | chr3_4:9640302-9640321 | Msa0489360:CDS | 35.0% | |
| AGAGATGGATATACAGAATG+GGG | - | chr3_4:9640304-9640323 | Msa0489360:CDS | 35.0% | |
| CTTATTGAGTGAAATCCATG+TGG | + | chr3_4:9640542-9640561 | None:intergenic | 35.0% | |
| GATTTCACTCAATAAGAGAG+TGG | - | chr3_4:9640546-9640565 | Msa0489360:intron | 35.0% | |
| ATAGCCTGAAGAACTATTAC+AGG | - | chr3_4:9640796-9640815 | Msa0489360:intron | 35.0% | |
| TAGCCTGAAGAACTATTACA+GGG | - | chr3_4:9640797-9640816 | Msa0489360:intron | 35.0% | |
| TGTGATCATGTCAAATCCAT+TGG | - | chr3_4:9640860-9640879 | Msa0489360:intron | 35.0% | |
| ! | GAGAAGAAGTTTAGAATCTG+TGG | + | chr3_4:9640886-9640905 | None:intergenic | 35.0% |
| CTTCTTCTCTCATTTGTCAA+AGG | - | chr3_4:9640897-9640916 | Msa0489360:intron | 35.0% | |
| !!! | TTCTATTTTTGGTAGGGGAA+TGG | - | chr3_4:9641166-9641185 | Msa0489360:intron | 35.0% |
| AATACACATCCATTTGTGCT+TGG | + | chr3_4:9641245-9641264 | None:intergenic | 35.0% | |
| GTGTATTCTCATGCAACATT+TGG | - | chr3_4:9641258-9641277 | Msa0489360:intron | 35.0% | |
| ATTCTCATGCAACATTTGGA+TGG | - | chr3_4:9641262-9641281 | Msa0489360:intron | 35.0% | |
| TTCTCATGCAACATTTGGAT+GGG | - | chr3_4:9641263-9641282 | Msa0489360:intron | 35.0% | |
| !! | TACATAAAGCTCTAGATGCA+AGG | - | chr3_4:9641348-9641367 | Msa0489360:CDS | 35.0% |
| !! | ACATAAAGCTCTAGATGCAA+GGG | - | chr3_4:9641349-9641368 | Msa0489360:CDS | 35.0% |
| AAGTGTACTTGAGACTGTAA+TGG | + | chr3_4:9641391-9641410 | None:intergenic | 35.0% | |
| TAAGCAAACGAAAGAGAGTG+AGG | + | chr3_4:9634519-9634538 | None:intergenic | 40.0% | |
| GTAGGACAAAAAGTTTGCCA+TGG | - | chr3_4:9635312-9635331 | Msa0489360:intron | 40.0% | |
| TTTGTCTCTCACTAAACCCA+TGG | + | chr3_4:9635332-9635351 | None:intergenic | 40.0% | |
| ACATATCTTTCCGCTGAAGA+TGG | - | chr3_4:9635545-9635564 | Msa0489360:intron | 40.0% | |
| CATATCTTTCCGCTGAAGAT+GGG | - | chr3_4:9635546-9635565 | Msa0489360:intron | 40.0% | |
| ATATCTTTCCGCTGAAGATG+GGG | - | chr3_4:9635547-9635566 | Msa0489360:intron | 40.0% | |
| ! | TTCTGGTTGGGAAACATTCA+GGG | - | chr3_4:9635604-9635623 | Msa0489360:intron | 40.0% |
| !! | TATTGGCTCATTTGCAGCTT+TGG | - | chr3_4:9635719-9635738 | Msa0489360:intron | 40.0% |
| AACAAGAAATTTGTGGGGCA+AGG | - | chr3_4:9635778-9635797 | Msa0489360:intron | 40.0% | |
| GGTCAAAAAGGTCAAACCAA+CGG | - | chr3_4:9636234-9636253 | Msa0489360:intron | 40.0% | |
| GTCAAAAAGGTCAAACCAAC+GGG | - | chr3_4:9636235-9636254 | Msa0489360:intron | 40.0% | |
| TCAGTGACTGCAGATTATCA+AGG | - | chr3_4:9636599-9636618 | Msa0489360:intron | 40.0% | |
| TTGGGATGACAATGATCCAT+CGG | - | chr3_4:9636628-9636647 | Msa0489360:intron | 40.0% | |
| !! | GGAGAGTACCAACTTACTAA+TGG | - | chr3_4:9636683-9636702 | Msa0489360:intron | 40.0% |
| ! | TTTAGGTGGGTTTGGATCTT+GGG | + | chr3_4:9636921-9636940 | None:intergenic | 40.0% |
| ! | ACAAAAGGTTTAGGTGGGTT+TGG | + | chr3_4:9636929-9636948 | None:intergenic | 40.0% |
| ! | AACCCACCTAAACCTTTTGT+TGG | - | chr3_4:9636929-9636948 | Msa0489360:intron | 40.0% |
| ! | ACCCACCTAAACCTTTTGTT+GGG | - | chr3_4:9636930-9636949 | Msa0489360:intron | 40.0% |
| CACTTGACAATGCTTTCACA+TGG | - | chr3_4:9636966-9636985 | Msa0489360:intron | 40.0% | |
| ! | GGTTTGAAATTGAGAGAGGA+AGG | - | chr3_4:9637090-9637109 | Msa0489360:intron | 40.0% |
| ! | GCTTGCTGACATATTCACTA+AGG | + | chr3_4:9637425-9637444 | None:intergenic | 40.0% |
| GCTAGGGAACAAGTAAACAA+AGG | + | chr3_4:9637484-9637503 | None:intergenic | 40.0% | |
| CCTGATGCTAAAAGAAAGCT+AGG | + | chr3_4:9637501-9637520 | None:intergenic | 40.0% | |
| !! | CCTAGCTTTCTTTTAGCATC+AGG | - | chr3_4:9637498-9637517 | Msa0489360:intron | 40.0% |
| AGGAATGTGCTTGTAGAACA+AGG | - | chr3_4:9637518-9637537 | Msa0489360:intron | 40.0% | |
| AGAACATTGTTTGACAGGAC+CGG | + | chr3_4:9637708-9637727 | None:intergenic | 40.0% | |
| ACATGTACTCCACAACACAA+TGG | + | chr3_4:9637750-9637769 | None:intergenic | 40.0% | |
| !!! | ATTTTGAGAACTGATGGTGG+TGG | + | chr3_4:9637839-9637858 | None:intergenic | 40.0% |
| CCATTGGAGGTTTCTTCTTT+CGG | + | chr3_4:9638004-9638023 | None:intergenic | 40.0% | |
| TTCTGATGTATGTGGTCCAT+TGG | + | chr3_4:9638020-9638039 | None:intergenic | 40.0% | |
| TTGGATACACCAAATCAGGT+TGG | + | chr3_4:9638130-9638149 | None:intergenic | 40.0% | |
| !!! | GATTTTGGGAGTACCTAAGT+TGG | + | chr3_4:9638149-9638168 | None:intergenic | 40.0% |
| TGGCTATGACACTATAGGTT+TGG | + | chr3_4:9638217-9638236 | None:intergenic | 40.0% | |
| GTAGATGGCTATGACACTAT+AGG | + | chr3_4:9638222-9638241 | None:intergenic | 40.0% | |
| ! | TCTTTGCAAGGGAAGTTTTC+AGG | - | chr3_4:9638311-9638330 | Msa0489360:intron | 40.0% |
| GTTGGTCAATTAGTGCAGAA+GGG | + | chr3_4:9638397-9638416 | None:intergenic | 40.0% | |
| TGTTGGTCAATTAGTGCAGA+AGG | + | chr3_4:9638398-9638417 | None:intergenic | 40.0% | |
| CCAACAGTTAGAAAGTTGCA+CGG | - | chr3_4:9638412-9638431 | Msa0489360:intron | 40.0% | |
| CATAGAACACTAGTTGCAGA+AGG | + | chr3_4:9638514-9638533 | None:intergenic | 40.0% | |
| ! | AGAACAAGCTAAACTTGCTC+AGG | + | chr3_4:9638707-9638726 | None:intergenic | 40.0% |
| GTCACTATGCTTCTGAATGT+TGG | + | chr3_4:9638762-9638781 | None:intergenic | 40.0% | |
| ! | ATAACTCTAAGGGAGGATAC+TGG | + | chr3_4:9638906-9638925 | None:intergenic | 40.0% |
| ! | GGAAAGAATAACTCTAAGGG+AGG | + | chr3_4:9638913-9638932 | None:intergenic | 40.0% |
| TTTGGAAGCTCATGAACTGA+TGG | + | chr3_4:9639028-9639047 | None:intergenic | 40.0% | |
| GAAGAAGAAGAAGGACTACA+AGG | + | chr3_4:9639424-9639443 | None:intergenic | 40.0% | |
| GCAAAACGGTTATGATGAGT+TGG | + | chr3_4:9639496-9639515 | None:intergenic | 40.0% | |
| GTTTGTGGCACAAGATTTGT+TGG | + | chr3_4:9639526-9639545 | None:intergenic | 40.0% | |
| GCATTGTTGCGCTATCAAAT+CGG | + | chr3_4:9639723-9639742 | None:intergenic | 40.0% | |
| TTACTACAATAGTCACCGAG+CGG | - | chr3_4:9640158-9640177 | Msa0489360:intron | 40.0% | |
| GCAGTTGAAGGTTCTCAAAA+TGG | - | chr3_4:9640262-9640281 | Msa0489360:intron | 40.0% | |
| TGTTCCTAGCATTCTGTCTA+AGG | + | chr3_4:9640599-9640618 | None:intergenic | 40.0% | |
| CTATCTAGATTGACACCTAG+TGG | + | chr3_4:9640780-9640799 | None:intergenic | 40.0% | |
| CTTCCCTGTAATAGTTCTTC+AGG | + | chr3_4:9640803-9640822 | None:intergenic | 40.0% | |
| ! | AGTTTAGAATCTGTGGCCAA+TGG | + | chr3_4:9640879-9640898 | None:intergenic | 40.0% |
| ACATAAGAAATGACAGAGCC+TGG | - | chr3_4:9641006-9641025 | Msa0489360:intron | 40.0% | |
| CATAAGAAATGACAGAGCCT+GGG | - | chr3_4:9641007-9641026 | Msa0489360:intron | 40.0% | |
| ! | TATCTCTGGTAGTCTTGCAT+AGG | + | chr3_4:9641219-9641238 | None:intergenic | 40.0% |
| TTTGTGCTTGGACATATCTC+TGG | + | chr3_4:9641233-9641252 | None:intergenic | 40.0% | |
| GAGATATGTCCAAGCACAAA+TGG | - | chr3_4:9641233-9641252 | Msa0489360:intron | 40.0% | |
| AACATTTGGATGGGCCTATT+GGG | - | chr3_4:9641272-9641291 | Msa0489360:intron | 40.0% | |
| TTGACATTTGTAGGCCCAAT+AGG | + | chr3_4:9641289-9641308 | None:intergenic | 40.0% | |
| ATAACCATTGGAGTCTCAAG+TGG | - | chr3_4:9641310-9641329 | Msa0489360:CDS | 40.0% | |
| !! | CATAAAGCTCTAGATGCAAG+GGG | - | chr3_4:9641350-9641369 | Msa0489360:CDS | 40.0% |
| ATGGAACCTTCTCGCTTTGA+CGG | - | chr3_4:9634582-9634601 | Msa0489360:CDS | 45.0% | |
| ACAATTCCGTCAAAGCGAGA+AGG | + | chr3_4:9634591-9634610 | None:intergenic | 45.0% | |
| AACTACTTTGTCCCCTCCAA+AGG | + | chr3_4:9634893-9634912 | None:intergenic | 45.0% | |
| CTTCAGCGGAAAGATATGTC+TGG | + | chr3_4:9635544-9635563 | None:intergenic | 45.0% | |
| TATCTTTCCGCTGAAGATGG+GGG | - | chr3_4:9635548-9635567 | Msa0489360:intron | 45.0% | |
| ACTACTATTGTAGCCAACCG+TGG | - | chr3_4:9635575-9635594 | Msa0489360:intron | 45.0% | |
| ! | CTTCTGGTTGGGAAACATTC+AGG | - | chr3_4:9635603-9635622 | Msa0489360:intron | 45.0% |
| AAATTTGTGGGGCAAGGAGA+AGG | - | chr3_4:9635784-9635803 | Msa0489360:intron | 45.0% | |
| CACTACTGTCACACTCCAAT+TGG | + | chr3_4:9636182-9636201 | None:intergenic | 45.0% | |
| CAATTGGAGTGTGACAGTAG+TGG | - | chr3_4:9636180-9636199 | Msa0489360:intron | 45.0% | |
| ! | TGTTTGCTTTGCAGGAGCAT+TGG | - | chr3_4:9636810-9636829 | Msa0489360:intron | 45.0% |
| ! | GTTTAGGTGGGTTTGGATCT+TGG | + | chr3_4:9636922-9636941 | None:intergenic | 45.0% |
| CCCCAACAAAAGGTTTAGGT+GGG | + | chr3_4:9636934-9636953 | None:intergenic | 45.0% | |
| ! | CCCACCTAAACCTTTTGTTG+GGG | - | chr3_4:9636931-9636950 | Msa0489360:intron | 45.0% |
| ! | CCACCTAAACCTTTTGTTGG+GGG | - | chr3_4:9636932-9636951 | Msa0489360:intron | 45.0% |
| GATCCCCCAACAAAAGGTTT+AGG | + | chr3_4:9636938-9636957 | None:intergenic | 45.0% | |
| ! | ACCTTTTGTTGGGGGATCTT+TGG | - | chr3_4:9636940-9636959 | Msa0489360:intron | 45.0% |
| TATGTCAGCAAGCTGCAGAT+CGG | - | chr3_4:9637432-9637451 | Msa0489360:intron | 45.0% | |
| !! | GCATCTCCCCAGAAAGTATT+TGG | - | chr3_4:9637657-9637676 | Msa0489360:intron | 45.0% |
| CAAAGCAAAGCGTGATGCTT+TGG | + | chr3_4:9637918-9637937 | None:intergenic | 45.0% | |
| CCGAAAGAAGAAACCTCCAA+TGG | - | chr3_4:9638001-9638020 | Msa0489360:intron | 45.0% | |
| TGATGTATGTGGTCCATTGG+AGG | + | chr3_4:9638017-9638036 | None:intergenic | 45.0% | |
| GGGTTACTCAGTAACCATGA+AGG | + | chr3_4:9638377-9638396 | None:intergenic | 45.0% | |
| CCGTGCAACTTTCTAACTGT+TGG | + | chr3_4:9638415-9638434 | None:intergenic | 45.0% | |
| AGAAAGTTGCACGGCATACT+AGG | - | chr3_4:9638421-9638440 | Msa0489360:intron | 45.0% | |
| GAAAGTTGCACGGCATACTA+GGG | - | chr3_4:9638422-9638441 | Msa0489360:intron | 45.0% | |
| ! | ACACTAGTTGCAGAAGGCAT+GGG | + | chr3_4:9638508-9638527 | None:intergenic | 45.0% |
| AACACTAGTTGCAGAAGGCA+TGG | + | chr3_4:9638509-9638528 | None:intergenic | 45.0% | |
| AAGGGAGGATACTGGTCAAA+AGG | + | chr3_4:9638898-9638917 | None:intergenic | 45.0% | |
| AGGCTTGGGATGTTCTTGAA+AGG | + | chr3_4:9639329-9639348 | None:intergenic | 45.0% | |
| CACAAAGTCTAAGGAGGCTT+GGG | + | chr3_4:9639343-9639362 | None:intergenic | 45.0% | |
| !! | GAGCTTCTGGTTCTGATTCA+AGG | + | chr3_4:9639694-9639713 | None:intergenic | 45.0% |
| TGAATCAGAACCAGAAGCTC+TGG | - | chr3_4:9639694-9639713 | Msa0489360:intron | 45.0% | |
| AAATCGGTATCCAGAGCTTC+TGG | + | chr3_4:9639707-9639726 | None:intergenic | 45.0% | |
| GCATGGGATGAAAGTGATTG+TGG | - | chr3_4:9640231-9640250 | Msa0489360:intron | 45.0% | |
| GTGGATTTGCATGCAGTTGA+AGG | - | chr3_4:9640250-9640269 | Msa0489360:intron | 45.0% | |
| TCTATGACAGAGACTGTCTG+AGG | + | chr3_4:9640343-9640362 | None:intergenic | 45.0% | |
| TCCTCCTTAGACAGAATGCT+AGG | - | chr3_4:9640592-9640611 | Msa0489360:intron | 45.0% | |
| TCCTAGCATTCTGTCTAAGG+AGG | + | chr3_4:9640596-9640615 | None:intergenic | 45.0% | |
| GGGAAGCTTATGATGTTGTG+AGG | - | chr3_4:9640817-9640836 | Msa0489360:intron | 45.0% | |
| ACAGCTGAATGGAGCATACA+AGG | - | chr3_4:9641189-9641208 | Msa0489360:intron | 45.0% | |
| CAACATTTGGATGGGCCTAT+TGG | - | chr3_4:9641271-9641290 | Msa0489360:intron | 45.0% | |
| TCAACCACTTGAGACTCCAA+TGG | + | chr3_4:9641317-9641336 | None:intergenic | 45.0% | |
| CTCAAGTGGTTGATCGAGAA+TGG | - | chr3_4:9641324-9641343 | Msa0489360:CDS | 45.0% | |
| GTACTTGAGACTGTAATGGC+TGG | + | chr3_4:9641387-9641406 | None:intergenic | 45.0% | |
| !!! | AAATATAATTAATTTTGTAT+AGG | - | chr3_4:9634971-9634990 | Msa0489360:CDS | 5.0% |
| !! | GGAAACTGGCTTGTTGCTGA+AGG | - | chr3_4:9634555-9634574 | Msa0489360:CDS | 50.0% |
| !! | ACTGGCTTGTTGCTGAAGGA+TGG | - | chr3_4:9634559-9634578 | Msa0489360:CDS | 50.0% |
| ! | GCTTGTTGCTGAAGGATGGA+TGG | - | chr3_4:9634563-9634582 | Msa0489360:CDS | 50.0% |
| ! | TGGCTCATTTGCAGCTTTGG+AGG | - | chr3_4:9635722-9635741 | Msa0489360:intron | 50.0% |
| !! | GGCTCATTTGCAGCTTTGGA+GGG | - | chr3_4:9635723-9635742 | Msa0489360:intron | 50.0% |
| !!! | GGTCTATTTTGGCGGGTACT+TGG | - | chr3_4:9635910-9635929 | Msa0489360:intron | 50.0% |
| GATGCTGTGAGGATACCTGT+TGG | - | chr3_4:9636884-9636903 | Msa0489360:intron | 50.0% | |
| CTGTGAGGATACCTGTTGGA+TGG | - | chr3_4:9636888-9636907 | Msa0489360:intron | 50.0% | |
| TGAGGATACCTGTTGGATGG+TGG | - | chr3_4:9636891-9636910 | Msa0489360:intron | 50.0% | |
| CCCCCAACAAAAGGTTTAGG+TGG | + | chr3_4:9636935-9636954 | None:intergenic | 50.0% | |
| GCCAAAGATCCCCCAACAAA+AGG | + | chr3_4:9636944-9636963 | None:intergenic | 50.0% | |
| CCACAAAGTCTAAGGAGGCT+TGG | + | chr3_4:9639344-9639363 | None:intergenic | 50.0% | |
| CCAAGCCTCCTTAGACTTTG+TGG | - | chr3_4:9639341-9639360 | Msa0489360:intron | 50.0% | |
| CAAATGCTACTGTGCTGCAG+AGG | + | chr3_4:9639470-9639489 | None:intergenic | 50.0% | |
| GTTGGGAGTGAAGCCATGAA+TGG | + | chr3_4:9639628-9639647 | None:intergenic | 50.0% | |
| ! | GAGCATAGTGGGACAAGAGA+TGG | - | chr3_4:9640289-9640308 | Msa0489360:CDS | 50.0% |
| GAGCTGATGAATGAGCCACT+AGG | - | chr3_4:9640762-9640781 | Msa0489360:intron | 50.0% | |
| AGAGACACCACTAAGATCCC+AGG | + | chr3_4:9641027-9641046 | None:intergenic | 50.0% | |
| TAGGGGAATGGACAGCTGAA+TGG | - | chr3_4:9641178-9641197 | Msa0489360:intron | 50.0% | |
| AGTTCCTCCCCCATCTTCAG+CGG | + | chr3_4:9635558-9635577 | None:intergenic | 55.0% | |
| ACCAGAAGCAGAACCACGGT+TGG | + | chr3_4:9635591-9635610 | None:intergenic | 55.0% | |
| ! | ACCGTGGTTCTGCTTCTGGT+TGG | - | chr3_4:9635591-9635610 | Msa0489360:intron | 55.0% |
| CCCAACCAGAAGCAGAACCA+CGG | + | chr3_4:9635595-9635614 | None:intergenic | 55.0% | |
| ! | CCGTGGTTCTGCTTCTGGTT+GGG | - | chr3_4:9635592-9635611 | Msa0489360:intron | 55.0% |
| TGGGCTATCCACCATCCAAC+AGG | + | chr3_4:9636902-9636921 | None:intergenic | 55.0% | |
| GACAGAGCCTGGGATCTTAG+TGG | - | chr3_4:9641017-9641036 | Msa0489360:intron | 55.0% | |
| CTTTCCGCTGAAGATGGGGG+AGG | - | chr3_4:9635551-9635570 | Msa0489360:intron | 60.0% | |
| ! | GCCAACCGTGGTTCTGCTTC+TGG | - | chr3_4:9635587-9635606 | Msa0489360:intron | 60.0% |
| GGTGCAGAGTTTGAGCCCGT+TGG | + | chr3_4:9636253-9636272 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 9634462 | 9641450 | 9634462 | ID=Msa0489360;Name=Msa0489360 |
| chr3_4 | mRNA | 9634462 | 9641450 | 9634462 | ID=Msa0489360-mRNA-1;Parent=Msa0489360;Name=Msa0489360-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.14|0.12|1|0.57|0.62|8|88|411 |
| chr3_4 | exon | 9634462 | 9634731 | 9634462 | ID=Msa0489360-mRNA-1:exon:3140;Parent=Msa0489360-mRNA-1 |
| chr3_4 | exon | 9634841 | 9635089 | 9634841 | ID=Msa0489360-mRNA-1:exon:3139;Parent=Msa0489360-mRNA-1 |
| chr3_4 | exon | 9635129 | 9635175 | 9635129 | ID=Msa0489360-mRNA-1:exon:3138;Parent=Msa0489360-mRNA-1 |
| chr3_4 | exon | 9638919 | 9639088 | 9638919 | ID=Msa0489360-mRNA-1:exon:3137;Parent=Msa0489360-mRNA-1 |
| chr3_4 | exon | 9639176 | 9639328 | 9639176 | ID=Msa0489360-mRNA-1:exon:3136;Parent=Msa0489360-mRNA-1 |
| chr3_4 | exon | 9639988 | 9640176 | 9639988 | ID=Msa0489360-mRNA-1:exon:3135;Parent=Msa0489360-mRNA-1 |
| chr3_4 | exon | 9640287 | 9640367 | 9640287 | ID=Msa0489360-mRNA-1:exon:3134;Parent=Msa0489360-mRNA-1 |
| chr3_4 | exon | 9641286 | 9641450 | 9641286 | ID=Msa0489360-mRNA-1:exon:3133;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9641286 | 9641450 | 9641286 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9640287 | 9640367 | 9640287 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9639988 | 9640176 | 9639988 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9639176 | 9639328 | 9639176 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9638919 | 9639088 | 9638919 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9635129 | 9635175 | 9635129 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9634841 | 9635089 | 9634841 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | CDS | 9634550 | 9634731 | 9634550 | ID=Msa0489360-mRNA-1:cds;Parent=Msa0489360-mRNA-1 |
| chr3_4 | three_prime_UTR | 9634462 | 9634549 | 9634462 | ID=Msa0489360-mRNA-1:three_prime_utr;Parent=Msa0489360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
