Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0350040 | KAF3623146.1 | 51.069 | 795 | 300 | 13 | 2 | 770 | 428 | 1159 | 0.0 | 747 |
Msa0350040 | KAF3623146.1 | 54.693 | 799 | 329 | 12 | 1 | 770 | 17 | 811 | 0.0 | 840 |
Msa0350040 | KAF3623146.1 | 56.555 | 389 | 163 | 4 | 387 | 770 | 1 | 388 | 2.61e-137 | 445 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0350040 | sp|Q9S7T8|SPZX_ARATH | 51.392 | 395 | 176 | 6 | 387 | 770 | 1 | 390 | 3.51e-132 | 400 |
Msa0350040 | sp|Q9S7T8|SPZX_ARATH | 53.514 | 370 | 161 | 5 | 1 | 360 | 17 | 385 | 6.22e-128 | 389 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0350040 | A0A103XYS6 | 55.612 | 793 | 325 | 13 | 1 | 771 | 17 | 804 | 0.0 | 821 |
Msa0350040 | A0A103XYS6 | 59.896 | 384 | 148 | 5 | 387 | 765 | 1 | 383 | 1.53e-142 | 448 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0350040 | Msa0350060 | 0.868343 | 7.006749e-66 | -8.615850e-47 |
Msa0350040 | Msa0396610 | 0.858231 | 9.491528e-63 | -8.615850e-47 |
Msa0350040 | Msa0444180 | 0.894621 | 2.075833e-75 | -8.615850e-47 |
Msa0350040 | Msa0491740 | 0.831833 | 1.334160e-55 | -8.615850e-47 |
Msa0350040 | Msa0655860 | 0.817031 | 4.071438e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0350040 | MtrunA17_Chr3g0083861 | 80.569 | 422 | 74 | 3 | 354 | 772 | 25 | 441 | 0.0 | 656 |
Msa0350040 | MtrunA17_Chr3g0083861 | 80.601 | 366 | 64 | 2 | 1 | 360 | 70 | 434 | 0.0 | 572 |
Msa0350040 | MtrunA17_Chr3g0133391 | 72.938 | 388 | 100 | 3 | 387 | 770 | 1 | 387 | 0.0 | 548 |
Msa0350040 | MtrunA17_Chr3g0133391 | 73.370 | 368 | 88 | 4 | 1 | 360 | 17 | 382 | 1.96e-176 | 511 |
Msa0350040 | MtrunA17_Chr2g0302581 | 70.663 | 392 | 105 | 4 | 387 | 772 | 1 | 388 | 0.0 | 522 |
Msa0350040 | MtrunA17_Chr2g0302581 | 67.027 | 370 | 107 | 5 | 1 | 360 | 17 | 381 | 7.74e-160 | 468 |
Msa0350040 | MtrunA17_Chr2g0302611 | 69.643 | 392 | 109 | 4 | 387 | 772 | 1 | 388 | 2.44e-180 | 521 |
Msa0350040 | MtrunA17_Chr2g0302611 | 66.216 | 370 | 110 | 5 | 1 | 360 | 17 | 381 | 5.59e-160 | 469 |
Msa0350040 | MtrunA17_Chr8g0346621 | 66.583 | 398 | 121 | 5 | 379 | 770 | 4 | 395 | 2.64e-178 | 516 |
Msa0350040 | MtrunA17_Chr8g0346621 | 67.760 | 366 | 108 | 4 | 1 | 360 | 29 | 390 | 1.10e-165 | 484 |
Msa0350040 | MtrunA17_Chr4g0023671 | 68.930 | 383 | 116 | 2 | 390 | 770 | 5 | 386 | 1.08e-177 | 514 |
Msa0350040 | MtrunA17_Chr4g0023671 | 68.306 | 366 | 108 | 3 | 1 | 360 | 18 | 381 | 8.72e-168 | 489 |
Msa0350040 | MtrunA17_Chr3g0133411 | 66.332 | 398 | 110 | 5 | 396 | 770 | 40 | 436 | 3.46e-175 | 509 |
Msa0350040 | MtrunA17_Chr3g0133411 | 63.636 | 396 | 109 | 6 | 1 | 367 | 47 | 436 | 5.56e-163 | 478 |
Msa0350040 | MtrunA17_Chr3g0096411 | 63.300 | 406 | 113 | 8 | 381 | 772 | 9 | 392 | 4.38e-169 | 492 |
Msa0350040 | MtrunA17_Chr3g0096411 | 63.488 | 367 | 107 | 6 | 1 | 360 | 39 | 385 | 1.19e-154 | 455 |
Msa0350040 | MtrunA17_Chr3g0133511 | 65.012 | 403 | 117 | 10 | 387 | 770 | 1 | 398 | 1.32e-165 | 484 |
Msa0350040 | MtrunA17_Chr3g0133511 | 63.566 | 387 | 119 | 7 | 1 | 369 | 18 | 400 | 5.68e-155 | 456 |
Msa0350040 | MtrunA17_Chr3g0133481 | 63.990 | 386 | 131 | 4 | 390 | 770 | 5 | 387 | 2.30e-160 | 470 |
Msa0350040 | MtrunA17_Chr3g0133481 | 60.916 | 371 | 128 | 6 | 1 | 360 | 18 | 382 | 1.69e-142 | 424 |
Msa0350040 | MtrunA17_Chr7g0233731 | 61.500 | 400 | 144 | 5 | 378 | 768 | 2 | 400 | 7.08e-159 | 469 |
Msa0350040 | MtrunA17_Chr7g0233731 | 61.022 | 372 | 131 | 5 | 1 | 360 | 28 | 397 | 6.41e-146 | 436 |
Msa0350040 | MtrunA17_Chr3g0133431 | 63.708 | 383 | 124 | 6 | 394 | 770 | 32 | 405 | 6.03e-155 | 457 |
Msa0350040 | MtrunA17_Chr3g0133431 | 64.420 | 371 | 110 | 8 | 1 | 360 | 41 | 400 | 4.49e-143 | 426 |
Msa0350040 | MtrunA17_Chr7g0233701 | 63.613 | 393 | 130 | 6 | 389 | 771 | 6 | 395 | 1.75e-153 | 452 |
Msa0350040 | MtrunA17_Chr7g0233701 | 61.559 | 372 | 129 | 5 | 1 | 360 | 20 | 389 | 1.66e-138 | 414 |
Msa0350040 | MtrunA17_Chr3g0083871 | 82.443 | 262 | 23 | 4 | 515 | 772 | 9 | 251 | 9.86e-141 | 414 |
Msa0350040 | MtrunA17_Chr3g0083871 | 76.892 | 251 | 38 | 3 | 111 | 360 | 13 | 244 | 2.52e-121 | 364 |
Msa0350040 | MtrunA17_Chr3g0083001 | 59.432 | 387 | 121 | 4 | 391 | 771 | 16 | 372 | 1.38e-139 | 416 |
Msa0350040 | MtrunA17_Chr3g0083001 | 58.602 | 372 | 109 | 6 | 1 | 360 | 28 | 366 | 7.15e-126 | 380 |
Msa0350040 | MtrunA17_Chr3g0134681 | 57.037 | 405 | 126 | 8 | 383 | 770 | 43 | 416 | 6.48e-137 | 410 |
Msa0350040 | MtrunA17_Chr3g0134681 | 60.916 | 371 | 105 | 7 | 1 | 360 | 70 | 411 | 3.67e-135 | 406 |
Msa0350040 | MtrunA17_Chr3g0133531 | 62.706 | 303 | 106 | 4 | 472 | 770 | 5 | 304 | 2.01e-117 | 356 |
Msa0350040 | MtrunA17_Chr3g0133531 | 58.521 | 311 | 109 | 7 | 70 | 369 | 5 | 306 | 1.08e-104 | 323 |
Msa0350040 | MtrunA17_Chr4g0046911 | 68.077 | 260 | 78 | 3 | 513 | 770 | 2 | 258 | 2.26e-115 | 349 |
Msa0350040 | MtrunA17_Chr4g0046911 | 66.537 | 257 | 80 | 4 | 111 | 367 | 8 | 258 | 4.99e-106 | 325 |
Msa0350040 | MtrunA17_Chr3g0133371 | 66.929 | 254 | 82 | 2 | 519 | 771 | 35 | 287 | 1.25e-114 | 348 |
Msa0350040 | MtrunA17_Chr3g0133371 | 66.534 | 251 | 79 | 3 | 111 | 360 | 35 | 281 | 1.37e-108 | 333 |
Msa0350040 | MtrunA17_Chr8g0358841 | 66.421 | 271 | 78 | 7 | 511 | 772 | 3 | 269 | 1.27e-110 | 337 |
Msa0350040 | MtrunA17_Chr8g0358841 | 66.008 | 253 | 80 | 4 | 112 | 360 | 12 | 262 | 1.38e-103 | 319 |
Msa0350040 | MtrunA17_Chr7g0233691 | 64.552 | 268 | 88 | 3 | 510 | 771 | 11 | 277 | 1.29e-109 | 335 |
Msa0350040 | MtrunA17_Chr7g0233691 | 63.492 | 252 | 86 | 3 | 113 | 360 | 22 | 271 | 1.92e-99 | 308 |
Msa0350040 | MtrunA17_Chr7g0233721 | 61.940 | 268 | 95 | 3 | 510 | 771 | 11 | 277 | 3.45e-103 | 318 |
Msa0350040 | MtrunA17_Chr7g0233721 | 60.547 | 256 | 95 | 3 | 109 | 360 | 18 | 271 | 4.59e-93 | 292 |
Msa0350040 | MtrunA17_Chr8g0346661 | 69.507 | 223 | 67 | 1 | 389 | 611 | 4 | 225 | 1.39e-102 | 315 |
Msa0350040 | MtrunA17_Chr8g0346661 | 69.231 | 208 | 58 | 1 | 1 | 202 | 18 | 225 | 1.91e-94 | 293 |
Msa0350040 | MtrunA17_Chr7g0233751 | 56.190 | 315 | 105 | 7 | 381 | 683 | 4 | 297 | 2.90e-100 | 311 |
Msa0350040 | MtrunA17_Chr7g0233751 | 53.608 | 291 | 98 | 5 | 1 | 275 | 28 | 297 | 7.86e-92 | 290 |
Msa0350040 | MtrunA17_Chr3g0141031 | 71.233 | 219 | 58 | 3 | 556 | 770 | 1 | 218 | 6.57e-98 | 302 |
Msa0350040 | MtrunA17_Chr3g0141031 | 68.493 | 219 | 57 | 4 | 148 | 360 | 1 | 213 | 2.07e-89 | 280 |
Msa0350040 | MtrunA17_Chr3g0083041 | 63.424 | 257 | 89 | 4 | 518 | 771 | 44 | 298 | 1.86e-97 | 304 |
Msa0350040 | MtrunA17_Chr3g0083041 | 63.745 | 251 | 83 | 5 | 113 | 360 | 47 | 292 | 3.00e-90 | 285 |
Msa0350040 | MtrunA17_Chr2g0302701 | 68.599 | 207 | 58 | 3 | 572 | 772 | 9 | 214 | 1.21e-85 | 270 |
Msa0350040 | MtrunA17_Chr2g0302701 | 66.169 | 201 | 62 | 3 | 164 | 360 | 9 | 207 | 1.01e-78 | 252 |
Msa0350040 | MtrunA17_Chr3g0143151 | 42.025 | 395 | 205 | 12 | 392 | 769 | 20 | 407 | 1.41e-79 | 261 |
Msa0350040 | MtrunA17_Chr3g0143151 | 42.049 | 371 | 187 | 10 | 12 | 360 | 39 | 403 | 3.41e-77 | 255 |
Msa0350040 | MtrunA17_Chr3g0133091 | 65.896 | 173 | 57 | 2 | 148 | 319 | 1 | 172 | 3.47e-69 | 226 |
Msa0350040 | MtrunA17_Chr3g0133091 | 61.364 | 176 | 63 | 3 | 556 | 727 | 1 | 175 | 9.77e-63 | 208 |
Msa0350040 | MtrunA17_Chr3g0132731 | 69.333 | 150 | 45 | 1 | 104 | 253 | 10 | 158 | 1.88e-66 | 217 |
Msa0350040 | MtrunA17_Chr3g0132731 | 67.785 | 149 | 47 | 1 | 513 | 661 | 11 | 158 | 1.90e-63 | 209 |
Msa0350040 | MtrunA17_Chr3g0133471 | 65.060 | 166 | 52 | 3 | 181 | 341 | 1 | 165 | 1.61e-60 | 201 |
Msa0350040 | MtrunA17_Chr3g0133471 | 59.394 | 165 | 57 | 3 | 591 | 746 | 2 | 165 | 1.59e-55 | 188 |
Msa0350040 | MtrunA17_Chr3g0133501 | 63.694 | 157 | 49 | 3 | 622 | 770 | 1 | 157 | 3.24e-55 | 187 |
Msa0350040 | MtrunA17_Chr3g0133501 | 64.286 | 154 | 47 | 4 | 213 | 360 | 1 | 152 | 7.37e-52 | 177 |
Msa0350040 | MtrunA17_Chr8g0346651 | 64.238 | 151 | 50 | 2 | 622 | 770 | 1 | 149 | 2.45e-54 | 184 |
Msa0350040 | MtrunA17_Chr8g0346651 | 68.243 | 148 | 43 | 4 | 213 | 360 | 1 | 144 | 1.80e-53 | 181 |
Msa0350040 | MtrunA17_Chr3g0134651 | 58.434 | 166 | 62 | 3 | 170 | 330 | 1 | 164 | 3.60e-54 | 184 |
Msa0350040 | MtrunA17_Chr3g0134651 | 59.615 | 156 | 60 | 2 | 578 | 731 | 1 | 155 | 1.46e-53 | 182 |
Msa0350040 | MtrunA17_Chr4g0046951 | 74.576 | 118 | 29 | 1 | 513 | 630 | 2 | 118 | 6.30e-54 | 182 |
Msa0350040 | MtrunA17_Chr4g0046951 | 72.973 | 111 | 30 | 0 | 111 | 221 | 8 | 118 | 5.48e-49 | 169 |
Msa0350040 | MtrunA17_Chr3g0133351 | 69.767 | 129 | 39 | 0 | 387 | 515 | 1 | 129 | 7.96e-54 | 183 |
Msa0350040 | MtrunA17_Chr3g0133351 | 67.826 | 115 | 37 | 0 | 1 | 115 | 17 | 131 | 1.26e-47 | 166 |
Msa0350040 | MtrunA17_Chr3g0133401 | 54.696 | 181 | 47 | 2 | 591 | 771 | 2 | 147 | 1.37e-53 | 182 |
Msa0350040 | MtrunA17_Chr3g0133401 | 52.486 | 181 | 45 | 3 | 181 | 360 | 1 | 141 | 2.00e-48 | 167 |
Msa0350040 | MtrunA17_Chr4g0046941 | 68.000 | 125 | 40 | 0 | 391 | 515 | 7 | 131 | 1.47e-49 | 171 |
Msa0350040 | MtrunA17_Chr4g0046941 | 68.142 | 113 | 36 | 0 | 1 | 113 | 19 | 131 | 8.81e-46 | 160 |
Msa0350040 | MtrunA17_Chr8g0358851 | 70.079 | 127 | 36 | 1 | 391 | 515 | 6 | 132 | 1.51e-46 | 162 |
Msa0350040 | MtrunA17_Chr8g0358851 | 68.696 | 115 | 34 | 1 | 1 | 113 | 18 | 132 | 2.99e-42 | 150 |
Msa0350040 | MtrunA17_Chr7g0233681 | 58.156 | 141 | 52 | 3 | 381 | 516 | 3 | 141 | 3.75e-44 | 155 |
Msa0350040 | MtrunA17_Chr7g0233681 | 60.000 | 115 | 44 | 1 | 1 | 113 | 26 | 140 | 2.86e-40 | 144 |
Msa0350040 | MtrunA17_Chr7g0233711 | 60.606 | 132 | 46 | 2 | 389 | 516 | 6 | 135 | 7.17e-44 | 155 |
Msa0350040 | MtrunA17_Chr7g0233711 | 60.870 | 115 | 43 | 1 | 1 | 113 | 20 | 134 | 9.31e-40 | 144 |
Msa0350040 | MtrunA17_Chr3g0134661 | 73.267 | 101 | 25 | 1 | 1 | 99 | 3 | 103 | 1.20e-42 | 150 |
Msa0350040 | MtrunA17_Chr3g0134661 | 71.845 | 103 | 27 | 1 | 401 | 501 | 1 | 103 | 1.53e-41 | 147 |
Msa0350040 | MtrunA17_Chr3g0133521 | 70.968 | 93 | 27 | 0 | 111 | 203 | 5 | 97 | 5.08e-39 | 139 |
Msa0350040 | MtrunA17_Chr3g0133521 | 69.072 | 97 | 29 | 1 | 516 | 612 | 2 | 97 | 7.52e-38 | 136 |
Msa0350040 | MtrunA17_Chr4g0046961 | 64.912 | 114 | 37 | 3 | 247 | 360 | 6 | 116 | 4.87e-36 | 132 |
Msa0350040 | MtrunA17_Chr4g0046961 | 65.179 | 112 | 35 | 2 | 658 | 767 | 9 | 118 | 5.51e-35 | 129 |
Msa0350040 | MtrunA17_Chr3g0141021 | 74.648 | 71 | 18 | 0 | 499 | 569 | 1 | 71 | 6.36e-30 | 113 |
Msa0350040 | MtrunA17_Chr3g0141021 | 69.014 | 71 | 16 | 1 | 97 | 161 | 1 | 71 | 6.28e-26 | 102 |
Msa0350040 | MtrunA17_Chr3g0132691 | 71.667 | 60 | 17 | 0 | 591 | 650 | 2 | 61 | 3.14e-22 | 90.9 |
Msa0350040 | MtrunA17_Chr3g0132691 | 72.581 | 62 | 16 | 1 | 181 | 242 | 1 | 61 | 4.50e-22 | 90.5 |
Msa0350040 | MtrunA17_Chr3g0133491 | 83.871 | 31 | 5 | 0 | 740 | 770 | 14 | 44 | 5.19e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0350040 | AT1G47710.1 | 51.392 | 395 | 176 | 6 | 387 | 770 | 1 | 390 | 3.56e-133 | 400 |
Msa0350040 | AT1G47710.1 | 53.514 | 370 | 161 | 5 | 1 | 360 | 17 | 385 | 6.33e-129 | 389 |
Msa0350040 | AT1G47710.2 | 51.392 | 395 | 176 | 6 | 387 | 770 | 28 | 417 | 3.08e-132 | 399 |
Msa0350040 | AT1G47710.2 | 53.514 | 370 | 161 | 5 | 1 | 360 | 44 | 412 | 5.66e-128 | 388 |
Msa0350040 | AT3G45220.1 | 48.111 | 397 | 185 | 8 | 387 | 769 | 1 | 390 | 4.19e-117 | 359 |
Msa0350040 | AT3G45220.1 | 48.148 | 378 | 170 | 8 | 1 | 360 | 17 | 386 | 2.84e-110 | 341 |
Msa0350040 | AT2G25240.1 | 49.231 | 390 | 183 | 8 | 387 | 769 | 1 | 382 | 3.10e-115 | 354 |
Msa0350040 | AT2G25240.1 | 50.404 | 371 | 164 | 9 | 1 | 360 | 17 | 378 | 8.00e-112 | 345 |
Msa0350040 | AT2G26390.1 | 48.744 | 398 | 177 | 9 | 387 | 769 | 1 | 386 | 1.51e-114 | 352 |
Msa0350040 | AT2G26390.1 | 47.884 | 378 | 167 | 9 | 1 | 360 | 17 | 382 | 2.75e-106 | 331 |
Msa0350040 | AT1G64030.1 | 42.967 | 391 | 195 | 8 | 387 | 769 | 1 | 371 | 2.52e-95 | 302 |
Msa0350040 | AT1G64030.1 | 41.240 | 371 | 178 | 7 | 5 | 360 | 22 | 367 | 3.95e-80 | 262 |
Msa0350040 | AT2G14540.1 | 43.860 | 399 | 196 | 7 | 378 | 769 | 20 | 397 | 1.51e-93 | 298 |
Msa0350040 | AT2G14540.1 | 43.316 | 374 | 172 | 9 | 1 | 360 | 46 | 393 | 1.60e-84 | 275 |
Msa0350040 | AT1G62170.1 | 41.985 | 393 | 197 | 7 | 386 | 769 | 61 | 431 | 5.01e-92 | 295 |
Msa0350040 | AT1G62170.1 | 42.234 | 367 | 175 | 6 | 7 | 360 | 85 | 427 | 4.34e-86 | 280 |
Msa0350040 | AT2G35580.1 | 41.750 | 400 | 185 | 11 | 381 | 769 | 9 | 371 | 1.06e-89 | 287 |
Msa0350040 | AT2G35580.1 | 42.897 | 359 | 166 | 11 | 17 | 360 | 33 | 367 | 1.60e-79 | 260 |
Msa0350040 | AT1G62170.2 | 38.732 | 426 | 197 | 8 | 386 | 769 | 61 | 464 | 5.06e-85 | 278 |
Msa0350040 | AT1G62170.2 | 38.750 | 400 | 175 | 6 | 7 | 360 | 85 | 460 | 8.10e-81 | 266 |
Msa0350040 | AT1G64010.2 | 47.907 | 215 | 91 | 4 | 556 | 769 | 1 | 195 | 1.89e-58 | 197 |
Msa0350040 | AT1G64010.2 | 47.685 | 216 | 85 | 5 | 148 | 360 | 1 | 191 | 1.34e-53 | 184 |
Msa0350040 | AT1G64010.1 | 46.500 | 200 | 86 | 4 | 571 | 769 | 2 | 181 | 3.26e-51 | 177 |
Msa0350040 | AT1G64010.1 | 46.269 | 201 | 80 | 5 | 163 | 360 | 2 | 177 | 5.80e-46 | 162 |
Msa0350040 | AT1G62160.1 | 42.132 | 197 | 89 | 4 | 578 | 769 | 42 | 218 | 8.78e-33 | 126 |
Msa0350040 | AT1G62160.1 | 39.286 | 196 | 91 | 6 | 170 | 360 | 42 | 214 | 1.40e-30 | 120 |
Msa0350040 | AT1G63280.1 | 55.462 | 119 | 48 | 3 | 512 | 628 | 5 | 120 | 1.28e-32 | 122 |
Msa0350040 | AT1G63280.1 | 52.252 | 111 | 49 | 2 | 111 | 219 | 12 | 120 | 8.27e-29 | 112 |
Msa0350040 | AT1G51330.1 | 49.587 | 121 | 50 | 2 | 489 | 609 | 15 | 124 | 2.01e-25 | 104 |
Msa0350040 | AT1G51330.1 | 57.471 | 87 | 37 | 0 | 114 | 200 | 38 | 124 | 5.46e-25 | 103 |
Msa0350040 | AT1G64020.1 | 35.238 | 105 | 65 | 3 | 1 | 103 | 17 | 120 | 9.84e-13 | 65.9 |
Msa0350040 | AT1G64020.1 | 29.752 | 121 | 82 | 3 | 387 | 505 | 1 | 120 | 4.38e-12 | 64.3 |
Find 139 sgRNAs with CRISPR-Local
Find 501 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTAATGCACTCTACTTTAA+AGG | 0.124495 | 3_1:-14553845 | Msa0350040:CDS |
GCTAATGCGCTCTACTTTAA+AGG | 0.156076 | 3_1:-14548166 | Msa0350040:CDS |
CGACTAAAGAAGTGAATTTA+TGG | 0.178990 | 3_1:-14548267 | Msa0350040:CDS |
CAATGATACTTAGCACAATT+TGG | 0.212116 | 3_1:+14554760 | None:intergenic |
TGATTTAAGAAGTGAATTTA+TGG | 0.216698 | 3_1:-14553946 | Msa0350040:intron |
TTATCTTTGCCTTTCTTATA+CGG | 0.278481 | 3_1:+14547995 | None:intergenic |
GAGGAAGAAGTTCTTTAATA+AGG | 0.287252 | 3_1:+14548224 | None:intergenic |
GAGGAAGAAGTTCTTTAATA+AGG | 0.287252 | 3_1:+14553903 | None:intergenic |
AATCTGAGTTACTACATTAC+AGG | 0.294004 | 3_1:-14547895 | Msa0350040:CDS |
TTATCTTTGCCTTTCTTATA+CGG | 0.304297 | 3_1:+14553677 | None:intergenic |
GGACAAAGTAGATTTATAAT+TGG | 0.309459 | 3_1:+14554527 | None:intergenic |
TCTCCTTTGTCAATGGTGTA+TGG | 0.329536 | 3_1:-14554599 | Msa0350040:CDS |
TCTCCTTCGTCAGTGGTGTA+TGG | 0.338625 | 3_1:-14549018 | Msa0350040:CDS |
AATTCACCTACTTCTACTTT+AGG | 0.342079 | 3_1:+14553542 | None:intergenic |
CTATTGAAAGCCATAGTCTT+TGG | 0.347416 | 3_1:-14549349 | Msa0350040:CDS |
GTTGATTCATCTACTGATCT+TGG | 0.347636 | 3_1:+14553881 | None:intergenic |
GTTGAGATGATCTGTGGATT+TGG | 0.358590 | 3_1:+14554686 | None:intergenic |
AATAAACTGCATCTCCTTGC+TGG | 0.359084 | 3_1:+14548051 | None:intergenic |
ACTGGAACCATTCTCTTTGT+TGG | 0.359618 | 3_1:-14547554 | Msa0350040:CDS |
TATTTCTGATTAGAGAAGAT+TGG | 0.360147 | 3_1:-14547577 | Msa0350040:CDS |
AAAAGATGGCTTGTCGGCTT+TGG | 0.374648 | 3_1:-14547936 | Msa0350040:CDS |
AAAAGATGGCTTGTCGGCTT+TGG | 0.374648 | 3_1:-14553618 | Msa0350040:CDS |
AATTCACCTACTTCTTCTTC+AGG | 0.377679 | 3_1:+14547863 | None:intergenic |
TGAAGGAAGGTTGAAGAGAA+AGG | 0.378765 | 3_1:+14554565 | None:intergenic |
CTTGTCGGCTTTGGTTAATA+AGG | 0.379850 | 3_1:-14547927 | Msa0350040:CDS |
GATTTAAGAAGTGAATTTAT+GGG | 0.382972 | 3_1:-14553945 | Msa0350040:intron |
TTCTTTCAAGAACAGATGTT+TGG | 0.395078 | 3_1:+14549237 | None:intergenic |
ACTGAAATAATTCTCTTTGT+CGG | 0.397067 | 3_1:-14553224 | Msa0350040:CDS |
TGAAGGAAGGTTGAAGAGAA+AGG | 0.398588 | 3_1:+14548984 | None:intergenic |
AAGACTATGGCTTTCAATAG+AGG | 0.401767 | 3_1:+14549352 | None:intergenic |
TTCCTTCCAAATGCAAAAGA+TGG | 0.403729 | 3_1:-14547950 | Msa0350040:CDS |
TTCCTTCCAAATGCAAAAGA+TGG | 0.403729 | 3_1:-14553632 | Msa0350040:CDS |
TCAATAGAGGTTTGAATGCC+TGG | 0.406885 | 3_1:+14549365 | None:intergenic |
CTGATTAAGACCAAAGACTA+TGG | 0.411799 | 3_1:+14549339 | None:intergenic |
TTCTGTCGAGAACAGATGTT+TGG | 0.430392 | 3_1:+14554818 | None:intergenic |
AGATGACACGATTTCTTTGA+AGG | 0.432418 | 3_1:+14548967 | None:intergenic |
CTCCTTGCTGGTCGTCATGA+AGG | 0.435175 | 3_1:+14548063 | None:intergenic |
CTCCTTTGTCAATGGTGTAT+GGG | 0.438426 | 3_1:-14554598 | Msa0350040:CDS |
GTTAAGCTATCAACTGATCT+TGG | 0.441723 | 3_1:+14548202 | None:intergenic |
CTCTCCGATGCTGCTCCCAC+AGG | 0.449677 | 3_1:-14554633 | Msa0350040:CDS |
GAAGGAAGGTTGAAGAGAAA+GGG | 0.450222 | 3_1:+14548985 | None:intergenic |
GAAGGAAGGTTGAAGAGAAA+GGG | 0.450222 | 3_1:+14554566 | None:intergenic |
GAAATCAACATAAGCTATAG+TGG | 0.451415 | 3_1:+14548934 | None:intergenic |
CTCCTTCGTCAGTGGTGTAT+GGG | 0.456822 | 3_1:-14549017 | Msa0350040:CDS |
TTCATTGAAGTAAATGAAGA+AGG | 0.457204 | 3_1:-14553359 | Msa0350040:CDS |
CCTCGACTCTCCTTTGTCAA+TGG | 0.460604 | 3_1:-14554606 | Msa0350040:CDS |
CTTCGTCTTCCGTATAAGAA+AGG | 0.461270 | 3_1:-14548004 | Msa0350040:CDS |
CTTCGTCTTCCGTATAAGAA+AGG | 0.461270 | 3_1:-14553686 | Msa0350040:CDS |
GACTAAAGAAGTGAATTTAT+GGG | 0.462620 | 3_1:-14548266 | Msa0350040:CDS |
AGGAAAATGTACATAGAGAA+TGG | 0.462827 | 3_1:+14547968 | None:intergenic |
TTCATTGAAGTAAATGAAGA+AGG | 0.463233 | 3_1:-14547689 | Msa0350040:CDS |
GAAGCTGCTGCAGCTAGTGC+TGG | 0.463886 | 3_1:-14553332 | Msa0350040:CDS |
AACAGCTTCTCGACTTCCTC+CGG | 0.467511 | 3_1:-14549129 | Msa0350040:CDS |
CTCTCCGACGCTGCTCCCAC+AGG | 0.479432 | 3_1:-14549052 | Msa0350040:CDS |
CGCATTAGCAAAGATGAGTC+TGG | 0.481214 | 3_1:+14548180 | None:intergenic |
TCCACCTGTGGGAGCAGCAT+CGG | 0.481475 | 3_1:+14554629 | None:intergenic |
TCTCTAATCAGAAATAAGAA+AGG | 0.483189 | 3_1:+14547584 | None:intergenic |
TAGGGAAACATTCGTTTCGT+TGG | 0.488135 | 3_1:+14549267 | None:intergenic |
CGCTCTACTTTAAAGGAGCA+TGG | 0.493111 | 3_1:-14548159 | Msa0350040:CDS |
CGTCTTCCTAAAGTAGAAGT+AGG | 0.495565 | 3_1:-14553548 | Msa0350040:CDS |
CATCTCCTCGCTAGTCATGA+AGG | 0.499712 | 3_1:+14553742 | None:intergenic |
AAATGCAAAAGATGGCTTGT+CGG | 0.500590 | 3_1:-14547942 | Msa0350040:CDS |
AAATGCAAAAGATGGCTTGT+CGG | 0.500590 | 3_1:-14553624 | Msa0350040:CDS |
CTGATTAGAGAAGATTGGAC+TGG | 0.501644 | 3_1:-14547572 | Msa0350040:CDS |
CTTGTCGGCTTTGGTTAAGA+AGG | 0.503520 | 3_1:-14553609 | Msa0350040:CDS |
GTGCTAAGTATCATTGCTGC+TGG | 0.503595 | 3_1:-14554753 | Msa0350040:CDS |
TCTCTAATTAGAAATAAGAA+AGG | 0.509129 | 3_1:+14553254 | None:intergenic |
GAAATATTTCAGAAACAGAA+AGG | 0.510094 | 3_1:+14547720 | None:intergenic |
GTACTAAGCATCATCGCTGC+TGG | 0.510384 | 3_1:-14549172 | Msa0350040:CDS |
ATCATCGCTGCTGGCTCTGA+GGG | 0.511801 | 3_1:-14549163 | Msa0350040:CDS |
CACTCTACTTTAAAGGAGCA+TGG | 0.514338 | 3_1:-14553838 | Msa0350040:CDS |
TCCGATGCTGCTCCCACAGG+TGG | 0.515601 | 3_1:-14554630 | Msa0350040:CDS |
TGACCGAGCTGCCATTCAAA+AGG | 0.515686 | 3_1:+14548092 | None:intergenic |
CTCTAATCAGAAATAAGAAA+GGG | 0.516757 | 3_1:+14547585 | None:intergenic |
CATCATCGCTGCTGGCTCTG+AGG | 0.516897 | 3_1:-14549164 | Msa0350040:CDS |
TCCACCTGTGGGAGCAGCGT+CGG | 0.517655 | 3_1:+14549048 | None:intergenic |
CAGATGTTTGGCAATGCATA+GGG | 0.522319 | 3_1:+14549249 | None:intergenic |
GACACGATTTCTTTGAAGGA+AGG | 0.523677 | 3_1:+14548971 | None:intergenic |
GTCAAACCTCCAGGAGTGAA+AGG | 0.524050 | 3_1:+14547767 | None:intergenic |
GTCAAACCTCCAGGAGTGAA+AGG | 0.524050 | 3_1:+14553446 | None:intergenic |
TCTGTTGATTTCATGACCAA+AGG | 0.525190 | 3_1:-14554504 | Msa0350040:intron |
CACTTGTCCAACAAAGAGAA+TGG | 0.528533 | 3_1:+14547547 | None:intergenic |
TTTGAATGGCAGCTCGGTCA+AGG | 0.529731 | 3_1:-14548089 | Msa0350040:CDS |
GTCGGCTTTGGTTAATAAGG+TGG | 0.531612 | 3_1:-14547924 | Msa0350040:CDS |
AGTCTTCCTGAAGAAGAAGT+AGG | 0.534032 | 3_1:-14547869 | Msa0350040:CDS |
CTCTAATTAGAAATAAGAAA+GGG | 0.536391 | 3_1:+14553255 | None:intergenic |
TCTGATATGCTGAAAGAGCT+AGG | 0.538261 | 3_1:-14553479 | Msa0350040:CDS |
TCTCATATGCTGAAAGAGCT+AGG | 0.539995 | 3_1:-14547800 | Msa0350040:CDS |
ACAGATGTTTGGCAATGCAT+AGG | 0.540369 | 3_1:+14549248 | None:intergenic |
TATCATTGCTGCTGGTTGTG+AGG | 0.540874 | 3_1:-14554745 | Msa0350040:CDS |
ATCATTGCTGCTGGTTGTGA+GGG | 0.541244 | 3_1:-14554744 | Msa0350040:CDS |
TCCTTGCTGGTCGTCATGAA+GGG | 0.547728 | 3_1:+14548064 | None:intergenic |
GATGATCTGTGGATTTGGAC+TGG | 0.552896 | 3_1:+14554691 | None:intergenic |
GATGATCAGTGGATTTAGAC+CGG | 0.555777 | 3_1:+14549110 | None:intergenic |
TCCGACGCTGCTCCCACAGG+TGG | 0.557284 | 3_1:-14549049 | Msa0350040:CDS |
GAAATATATTAGAAACAGAA+AGG | 0.558448 | 3_1:+14553390 | None:intergenic |
TCTGAATGGCAGCTCAGTCA+AGG | 0.566372 | 3_1:-14553768 | Msa0350040:CDS |
GATTCATCTACTGATCTTGG+AGG | 0.568404 | 3_1:+14553884 | None:intergenic |
AAGCTATCAACTGATCTTGG+AGG | 0.569083 | 3_1:+14548205 | None:intergenic |
CCTCGACTCTCCTTCGTCAG+TGG | 0.575802 | 3_1:-14549025 | Msa0350040:CDS |
TGCTAAGATCACTCATCAAG+AGG | 0.579659 | 3_1:+14547518 | None:intergenic |
GTCGAGAAGCTGTTGTTGTG+TGG | 0.586119 | 3_1:+14549138 | None:intergenic |
GTCGAGAAGCTGTTGTTGTG+TGG | 0.586119 | 3_1:+14554719 | None:intergenic |
AGCACAATTTGGATTGACAA+TGG | 0.590144 | 3_1:+14554771 | None:intergenic |
TGCATTAGTAAAGATGAGCC+TGG | 0.591361 | 3_1:+14553859 | None:intergenic |
TTTCGTTGGTGATTGATTCG+CGG | 0.591419 | 3_1:+14549281 | None:intergenic |
TGACTGAGCTGCCATTCAGA+AGG | 0.595810 | 3_1:+14553771 | None:intergenic |
CACGACAGAAACAAGCTGAA+AGG | 0.599858 | 3_1:+14549075 | None:intergenic |
TCGAGAAGCTGTTGTTGTGT+GGG | 0.605173 | 3_1:+14549139 | None:intergenic |
TCGAGAAGCTGTTGTTGTGT+GGG | 0.605173 | 3_1:+14554720 | None:intergenic |
TTATGTTGATTTCATAACCA+AGG | 0.605386 | 3_1:-14548924 | Msa0350040:intron |
ATCTCCTCGCTAGTCATGAA+GGG | 0.610814 | 3_1:+14553743 | None:intergenic |
TAGTGCTGCAATATGTTCCG+AGG | 0.625856 | 3_1:-14547648 | Msa0350040:CDS |
CTTTAGGAAGACGAAACTTG+TGG | 0.629899 | 3_1:+14553558 | None:intergenic |
GAGAGTCGAGGTCCACCTGT+GGG | 0.635303 | 3_1:+14549037 | None:intergenic |
GAGAGTCGAGGTCCACCTGT+GGG | 0.635303 | 3_1:+14554618 | None:intergenic |
AGTTCGAAATCGAATACCCT+CGG | 0.638336 | 3_1:+14547631 | None:intergenic |
GGCTCCCTTCATGACTAGCG+AGG | 0.638343 | 3_1:-14553747 | Msa0350040:CDS |
AAAATGTACATAGAGAATTG+AGG | 0.639607 | 3_1:+14553653 | None:intergenic |
TAATCAGAAATAAGAAAGGG+TGG | 0.640706 | 3_1:+14547588 | None:intergenic |
TCCCTTCATGACGACCAGCA+AGG | 0.643413 | 3_1:-14548065 | Msa0350040:CDS |
GGAGAGTCGAGGTCCACCTG+TGG | 0.645915 | 3_1:+14549036 | None:intergenic |
GGAGAGTCGAGGTCCACCTG+TGG | 0.645915 | 3_1:+14554617 | None:intergenic |
AACCCATACACCATTGACAA+AGG | 0.645992 | 3_1:+14554596 | None:intergenic |
AGTGCTGCAATATGTTCCGA+GGG | 0.658631 | 3_1:-14547647 | Msa0350040:CDS |
AACCCATACACCACTGACGA+AGG | 0.659348 | 3_1:+14549015 | None:intergenic |
GAGATAGTTGAGATGATCAG+TGG | 0.676063 | 3_1:+14549099 | None:intergenic |
GAGATAGTTGAGATGATCTG+TGG | 0.676063 | 3_1:+14554680 | None:intergenic |
AGTACAATTTGAAGAGACAG+TGG | 0.677153 | 3_1:+14549190 | None:intergenic |
AATCGTGTCATCTAATTACG+AGG | 0.678044 | 3_1:-14548957 | Msa0350040:CDS |
CACGACAGAAACAAGCTGAG+AGG | 0.687540 | 3_1:+14554656 | None:intergenic |
TATGCTGAAAGAGCTAGGAG+TGG | 0.693506 | 3_1:-14547795 | Msa0350040:CDS |
GATCAGTAGATGAATCAACC+AGG | 0.703083 | 3_1:-14553877 | Msa0350040:CDS |
TATGCTGAAAGAGCTAGGAG+TGG | 0.709518 | 3_1:-14553474 | Msa0350040:CDS |
GATCTGTGGATTTGGACTGG+AGG | 0.724184 | 3_1:+14554694 | None:intergenic |
TTTGGTCATGAAATCAACAG+AGG | 0.735242 | 3_1:+14554506 | None:intergenic |
CCACTGACGAAGGAGAGTCG+AGG | 0.741972 | 3_1:+14549025 | None:intergenic |
GATCAGTGGATTTAGACCGG+AGG | 0.742435 | 3_1:+14549113 | None:intergenic |
CCATTGACAAAGGAGAGTCG+AGG | 0.747113 | 3_1:+14554606 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTATATTTATATAAA+GGG | + | chr3_1:14551351-14551370 | None:intergenic | 0.0% |
!!! | TTTGTTTTTATTTTATTTGA+GGG | + | chr3_1:14547921-14547940 | None:intergenic | 10.0% |
!! | ATTTCATGTTAATTAATTAA+AGG | - | chr3_1:14547952-14547971 | Msa0350040:CDS | 10.0% |
!! | TTTCATGTTAATTAATTAAA+GGG | - | chr3_1:14547953-14547972 | Msa0350040:CDS | 10.0% |
!!! | AATTTTTTTTTTTTTTGAAG+AGG | + | chr3_1:14548192-14548211 | None:intergenic | 10.0% |
!!! | TTTAAAATACATAAACATAT+GGG | + | chr3_1:14549417-14549436 | None:intergenic | 10.0% |
!!! | TTTTAAAATACATAAACATA+TGG | + | chr3_1:14549418-14549437 | None:intergenic | 10.0% |
!!! | ATAAATTAATTTTCTACATT+CGG | + | chr3_1:14551004-14551023 | None:intergenic | 10.0% |
!! | TTGATTTCTATTTATATAAA+GGG | + | chr3_1:14551444-14551463 | None:intergenic | 10.0% |
!!! | TTTGATTTCTATTTATATAA+AGG | + | chr3_1:14551445-14551464 | None:intergenic | 10.0% |
!! | TCAAATTTAAAAATCAATTA+TGG | + | chr3_1:14554038-14554057 | None:intergenic | 10.0% |
!!! | GTTTGTTTTTATTTTATTTG+AGG | + | chr3_1:14547922-14547941 | None:intergenic | 15.0% |
!!! | ACTGATTTTTAAATTTGATA+TGG | - | chr3_1:14548361-14548380 | Msa0350040:intron | 15.0% |
!! | GATTATGAAAAATTAAATGT+AGG | - | chr3_1:14549904-14549923 | Msa0350040:intron | 15.0% |
!! | TTTATTAGTACAAAAGAATT+CGG | + | chr3_1:14550096-14550115 | None:intergenic | 15.0% |
!! | ATATTGCAAATTTCTATTAA+GGG | - | chr3_1:14550338-14550357 | Msa0350040:intron | 15.0% |
!!! | TAAATTAATTTTCTACATTC+GGG | + | chr3_1:14551003-14551022 | None:intergenic | 15.0% |
!! | TGATTTCTATTTATATAAAG+GGG | + | chr3_1:14551443-14551462 | None:intergenic | 15.0% |
!!! | TTAAATATTGTTCTCTTTTT+AGG | - | chr3_1:14552502-14552521 | Msa0350040:intron | 15.0% |
!! | TAAACAAGTAGAATTATTAT+AGG | + | chr3_1:14552662-14552681 | None:intergenic | 15.0% |
!! | AAAACATAATCACTTAATTT+AGG | + | chr3_1:14552834-14552853 | None:intergenic | 15.0% |
!!! | TTTTTTCCATTAACAATTAA+TGG | - | chr3_1:14553502-14553521 | Msa0350040:CDS | 15.0% |
!!! | TAAATTTGATATTGTTTTGA+AGG | - | chr3_1:14554049-14554068 | Msa0350040:intron | 15.0% |
!! | TGATTTAAGAAGTGAATTTA+TGG | - | chr3_1:14548402-14548421 | Msa0350040:intron | 20.0% |
!! | GATTTAAGAAGTGAATTTAT+GGG | - | chr3_1:14548403-14548422 | Msa0350040:intron | 20.0% |
!!! | TCAAATGAAATTTTGAATCT+TGG | + | chr3_1:14548839-14548858 | None:intergenic | 20.0% |
!! | GAAATATATTAGAAACAGAA+AGG | + | chr3_1:14548961-14548980 | None:intergenic | 20.0% |
!! | CTCTAATTAGAAATAAGAAA+GGG | + | chr3_1:14549096-14549115 | None:intergenic | 20.0% |
!! | TCTCTAATTAGAAATAAGAA+AGG | + | chr3_1:14549097-14549116 | None:intergenic | 20.0% |
!! | ATGAATTTCTATTAGAAAAC+AGG | + | chr3_1:14549218-14549237 | None:intergenic | 20.0% |
!! | ATTCATTTATGATGAAAGTT+TGG | - | chr3_1:14549232-14549251 | Msa0350040:CDS | 20.0% |
!! | CTAGTTTAAATAGTTTAGTT+AGG | + | chr3_1:14549732-14549751 | None:intergenic | 20.0% |
!! | GATATTGCAAATTTCTATTA+AGG | - | chr3_1:14550337-14550356 | Msa0350040:intron | 20.0% |
!!! | GCTTTAAATATATTACAAGT+TGG | - | chr3_1:14550938-14550957 | Msa0350040:intron | 20.0% |
!! | GAGTTTCTATTTATACAAAA+GGG | + | chr3_1:14551030-14551049 | None:intergenic | 20.0% |
!! | TGAGTTTCTATTTATACAAA+AGG | + | chr3_1:14551031-14551050 | None:intergenic | 20.0% |
!!! | ATTTTAAATTCGTCATGAAT+AGG | + | chr3_1:14552050-14552069 | None:intergenic | 20.0% |
!!! | ATGACGAATTTAAAATAGTT+TGG | - | chr3_1:14552054-14552073 | Msa0350040:intron | 20.0% |
!! | TGAAGAAGAAGAAAAAAAAT+AGG | - | chr3_1:14552130-14552149 | Msa0350040:intron | 20.0% |
!!! | TTAACTATTGTTCTCTTTTT+AGG | - | chr3_1:14552443-14552462 | Msa0350040:intron | 20.0% |
!!! | TAACTATTGTTCTCTTTTTA+GGG | - | chr3_1:14552444-14552463 | Msa0350040:intron | 20.0% |
!!! | GATTTGATTTGAAAAAATCT+AGG | - | chr3_1:14552887-14552906 | Msa0350040:intron | 20.0% |
!!! | TTATAAGGCTTTAATAGTAT+CGG | - | chr3_1:14552947-14552966 | Msa0350040:intron | 20.0% |
!! | TTAATGGAAAAAAAAAAGCA+GGG | + | chr3_1:14553495-14553514 | None:intergenic | 20.0% |
!!! | AATAACATTTGCTCTAAATT+AGG | + | chr3_1:14553568-14553587 | None:intergenic | 20.0% |
!! | ATACCTCAAAATATACAATA+TGG | + | chr3_1:14553805-14553824 | None:intergenic | 20.0% |
!! | AATAGAAGAAATTATGCTAA+AGG | + | chr3_1:14553980-14553999 | None:intergenic | 20.0% |
!!! | TCAAATGAAATTTTGAATCT+TGG | + | chr3_1:14548839-14548858 | None:intergenic | 20.0% |
! | GGACAAAGTAGATTTATAAT+TGG | + | chr3_1:14547824-14547843 | None:intergenic | 25.0% |
! | ATAGTAAAAGTTCATGACTT+TGG | - | chr3_1:14548096-14548115 | Msa0350040:CDS | 25.0% |
! | TTCTTTAATCAGTGTAGAAT+TGG | + | chr3_1:14548128-14548147 | None:intergenic | 25.0% |
! | TATTACGTTGCTAAATTAGT+TGG | + | chr3_1:14548264-14548283 | None:intergenic | 25.0% |
! | TTATCTTTGCCTTTCTTATA+CGG | + | chr3_1:14548674-14548693 | None:intergenic | 25.0% |
! | AAAATGTACATAGAGAATTG+AGG | + | chr3_1:14548698-14548717 | None:intergenic | 25.0% |
! | TTCATTGAAGTAAATGAAGA+AGG | - | chr3_1:14548989-14549008 | Msa0350040:CDS | 25.0% |
! | ACTGAAATAATTCTCTTTGT+CGG | - | chr3_1:14549124-14549143 | Msa0350040:CDS | 25.0% |
! | TTAAATAGTTTAGTTAGGCT+TGG | + | chr3_1:14549727-14549746 | None:intergenic | 25.0% |
!!! | TCCATTTGTTGTTTTAGTTT+TGG | + | chr3_1:14550043-14550062 | None:intergenic | 25.0% |
! | TATAGCATTGCATTTAATGT+AGG | - | chr3_1:14550222-14550241 | Msa0350040:intron | 25.0% |
!! | CTTAGTCTAAAATCTTGTAT+TGG | - | chr3_1:14550268-14550287 | Msa0350040:intron | 25.0% |
! | GATATCTAATCAAGAACTTT+AGG | - | chr3_1:14550572-14550591 | Msa0350040:intron | 25.0% |
! | ACATACAAAAAAATAGCGTA+AGG | + | chr3_1:14550700-14550719 | None:intergenic | 25.0% |
! | AAGATGATCAAGGTTTAATA+AGG | - | chr3_1:14550916-14550935 | Msa0350040:intron | 25.0% |
!! | TTTTCTTCGATTTCAAAACA+CGG | - | chr3_1:14551242-14551261 | Msa0350040:intron | 25.0% |
! | TAAAAAAAATTATCCACTGC+TGG | - | chr3_1:14551668-14551687 | Msa0350040:intron | 25.0% |
! | AAAAAAAATTATCCACTGCT+GGG | - | chr3_1:14551669-14551688 | Msa0350040:intron | 25.0% |
! | ATCAAATATCATGTCTTTGT+TGG | - | chr3_1:14551824-14551843 | Msa0350040:intron | 25.0% |
!! | TCTTCAAATTACCTTTTGTT+CGG | + | chr3_1:14552116-14552135 | None:intergenic | 25.0% |
!!! | ACCATTTTTTAATATCGTGA+TGG | - | chr3_1:14552186-14552205 | Msa0350040:intron | 25.0% |
! | TCCATCACGATATTAAAAAA+TGG | + | chr3_1:14552190-14552209 | None:intergenic | 25.0% |
!! | ATAGAAACGATTGTTACTTA+TGG | + | chr3_1:14552544-14552563 | None:intergenic | 25.0% |
! | TTAAATAAGCAAGAGATTTG+AGG | + | chr3_1:14552574-14552593 | None:intergenic | 25.0% |
! | TTCTACTTGTTTAATACATC+TGG | - | chr3_1:14552669-14552688 | Msa0350040:intron | 25.0% |
! | TTATGTTCAAGAGAGTAATT+TGG | - | chr3_1:14552711-14552730 | Msa0350040:intron | 25.0% |
! | GTCTTAATCAGTTGAAAAAT+CGG | - | chr3_1:14553021-14553040 | Msa0350040:intron | 25.0% |
!!! | TTATGTTGATTTCATAACCA+AGG | - | chr3_1:14553424-14553443 | Msa0350040:CDS | 25.0% |
! | GTTAATGGAAAAAAAAAAGC+AGG | + | chr3_1:14553496-14553515 | None:intergenic | 25.0% |
! | GTAGATCCATTAATTGTTAA+TGG | + | chr3_1:14553511-14553530 | None:intergenic | 25.0% |
! | ATAAAATAAACTGTTTGCGA+AGG | + | chr3_1:14553533-14553552 | None:intergenic | 25.0% |
!!! | GTTATTTTACTTTTGAAGCA+TGG | - | chr3_1:14553582-14553601 | Msa0350040:CDS | 25.0% |
! | ACTTATAAGTATTATGCTCT+TGG | - | chr3_1:14553625-14553644 | Msa0350040:CDS | 25.0% |
!! | AAAGTAGGTTCTTCTTTTAA+AGG | - | chr3_1:14553681-14553700 | Msa0350040:CDS | 25.0% |
!! | TGTCCATATTGTATATTTTG+AGG | - | chr3_1:14553799-14553818 | Msa0350040:CDS | 25.0% |
! | TTCTTTGATCAATATAGCTT+TGG | + | chr3_1:14553875-14553894 | None:intergenic | 25.0% |
! | TAGAACAAATAGATTCTTTC+TGG | + | chr3_1:14554012-14554031 | None:intergenic | 25.0% |
! | GACTAAAGAAGTGAATTTAT+GGG | - | chr3_1:14554082-14554101 | Msa0350040:intron | 25.0% |
!! | TATGATTTTCACCTTTTGAA+TGG | - | chr3_1:14554245-14554264 | Msa0350040:intron | 25.0% |
! | TTATCTTTGCCTTTCTTATA+CGG | + | chr3_1:14548674-14548693 | None:intergenic | 25.0% |
! | GAAATATTTCAGAAACAGAA+AGG | + | chr3_1:14554631-14554650 | None:intergenic | 25.0% |
! | TTCATTGAAGTAAATGAAGA+AGG | - | chr3_1:14548989-14549008 | Msa0350040:CDS | 25.0% |
! | CTCTAATCAGAAATAAGAAA+GGG | + | chr3_1:14554766-14554785 | None:intergenic | 25.0% |
! | TCTCTAATCAGAAATAAGAA+AGG | + | chr3_1:14554767-14554786 | None:intergenic | 25.0% |
!! | TATTTCTGATTAGAGAAGAT+TGG | - | chr3_1:14554771-14554790 | Msa0350040:CDS | 25.0% |
CAATGATACTTAGCACAATT+TGG | + | chr3_1:14547591-14547610 | None:intergenic | 30.0% | |
ACAGATTGCTGTGAAAAAAA+GGG | + | chr3_1:14547886-14547905 | None:intergenic | 30.0% | |
! | CAGAAAATTTAGGGTATACT+AGG | + | chr3_1:14547998-14548017 | None:intergenic | 30.0% |
! | CTAGTATACCCTAAATTTTC+TGG | - | chr3_1:14547996-14548015 | Msa0350040:CDS | 30.0% |
CCAACTAACCAGAAAATTTA+GGG | + | chr3_1:14548007-14548026 | None:intergenic | 30.0% | |
TCCAACTAACCAGAAAATTT+AGG | + | chr3_1:14548008-14548027 | None:intergenic | 30.0% | |
! | CTGAAATAAAGTAGAAGCAT+TGG | + | chr3_1:14548044-14548063 | None:intergenic | 30.0% |
! | ACTTTATTTCAGCACAAAGT+AGG | - | chr3_1:14548052-14548071 | Msa0350040:CDS | 30.0% |
! | CTTTATTTCAGCACAAAGTA+GGG | - | chr3_1:14548053-14548072 | Msa0350040:CDS | 30.0% |
! | TAATAAAGTGTTTCGTCACA+TGG | + | chr3_1:14548165-14548184 | None:intergenic | 30.0% |
GGATGCTAGAAAACAATAAA+GGG | + | chr3_1:14548243-14548262 | None:intergenic | 30.0% | |
TGGATGCTAGAAAACAATAA+AGG | + | chr3_1:14548244-14548263 | None:intergenic | 30.0% | |
GAGGAAGAAGTTCTTTAATA+AGG | + | chr3_1:14548448-14548467 | None:intergenic | 30.0% | |
ACTAATGCACTCTACTTTAA+AGG | - | chr3_1:14548503-14548522 | Msa0350040:intron | 30.0% | |
! | TATGATTTTCACCTTCTGAA+TGG | - | chr3_1:14548566-14548585 | Msa0350040:intron | 30.0% |
AATTCACCTACTTCTACTTT+AGG | + | chr3_1:14548809-14548828 | None:intergenic | 30.0% | |
TGGATTGCCATAAGATAAAT+AGG | - | chr3_1:14549189-14549208 | Msa0350040:CDS | 30.0% | |
GGATTGCCATAAGATAAATA+GGG | - | chr3_1:14549190-14549209 | Msa0350040:CDS | 30.0% | |
TTGTGAATGTGATGTTCTTA+GGG | + | chr3_1:14549566-14549585 | None:intergenic | 30.0% | |
GTATCTTCATTCAAAGATTG+TGG | - | chr3_1:14549619-14549638 | Msa0350040:intron | 30.0% | |
! | TCACTACTTCACTAGTTTAA+AGG | + | chr3_1:14549681-14549700 | None:intergenic | 30.0% |
CTAGTGAAAACTGTTTAAGA+TGG | - | chr3_1:14549748-14549767 | Msa0350040:intron | 30.0% | |
!! | GTTTTGTATGTGTTTAGAGT+AGG | + | chr3_1:14549797-14549816 | None:intergenic | 30.0% |
CTAAACACATACAAAACTTC+AGG | - | chr3_1:14549800-14549819 | Msa0350040:intron | 30.0% | |
CCATTATGTACTACTACTTA+AGG | + | chr3_1:14549835-14549854 | None:intergenic | 30.0% | |
CCTTAAGTAGTAGTACATAA+TGG | - | chr3_1:14549832-14549851 | Msa0350040:intron | 30.0% | |
GAATTAAACGAAGGAAAAGT+TGG | + | chr3_1:14550001-14550020 | None:intergenic | 30.0% | |
!!! | TTGTTGTTTTAGTTTTGGCT+GGG | + | chr3_1:14550038-14550057 | None:intergenic | 30.0% |
!!! | TTTGTTGTTTTAGTTTTGGC+TGG | + | chr3_1:14550039-14550058 | None:intergenic | 30.0% |
GCCAAAACTAAAACAACAAA+TGG | - | chr3_1:14550039-14550058 | Msa0350040:intron | 30.0% | |
TGTAGGAACTTATTCTGTTA+TGG | - | chr3_1:14550239-14550258 | Msa0350040:intron | 30.0% | |
TTTGTTGACATCACAATCTT+TGG | + | chr3_1:14550305-14550324 | None:intergenic | 30.0% | |
! | AAGGGTCATTGCAAATTTTA+TGG | - | chr3_1:14550356-14550375 | Msa0350040:intron | 30.0% |
! | TTTTATGGAGCAACAAGTAA+AGG | - | chr3_1:14550371-14550390 | Msa0350040:intron | 30.0% |
AAATAAAAGATCATCAACCG+AGG | + | chr3_1:14550465-14550484 | None:intergenic | 30.0% | |
! | ACAAACACACTGAATTTTCA+GGG | - | chr3_1:14550499-14550518 | Msa0350040:intron | 30.0% |
ATCTAATCAAGAACTTTAGG+AGG | - | chr3_1:14550575-14550594 | Msa0350040:intron | 30.0% | |
! | AATGAAAGTTTTGCAAGACA+TGG | - | chr3_1:14550889-14550908 | Msa0350040:intron | 30.0% |
TGTGTGAGTGAAATGATATA+GGG | + | chr3_1:14551056-14551075 | None:intergenic | 30.0% | |
TTGTGTGAGTGAAATGATAT+AGG | + | chr3_1:14551057-14551076 | None:intergenic | 30.0% | |
CTTATTCATTCATATCTCGT+AGG | - | chr3_1:14551123-14551142 | Msa0350040:intron | 30.0% | |
TTTCTTCGATTTCAAAACAC+GGG | - | chr3_1:14551243-14551262 | Msa0350040:intron | 30.0% | |
!! | TGATTTTCTACATTCGAGTT+GGG | + | chr3_1:14551319-14551338 | None:intergenic | 30.0% |
! | TTGATTTTCTACATTCGAGT+TGG | + | chr3_1:14551320-14551339 | None:intergenic | 30.0% |
TGTGTGAGTGAAATGATTTA+GGG | + | chr3_1:14551379-14551398 | None:intergenic | 30.0% | |
TGTGTGAGTGAAATGATTTA+GGG | + | chr3_1:14551379-14551398 | None:intergenic | 30.0% | |
TGATATTTGATTGATGCTCA+TGG | + | chr3_1:14551815-14551834 | None:intergenic | 30.0% | |
TTAAAATAATCATCCACTGC+AGG | - | chr3_1:14551895-14551914 | Msa0350040:intron | 30.0% | |
TAAAATAATCATCCACTGCA+GGG | - | chr3_1:14551896-14551915 | Msa0350040:intron | 30.0% | |
TAGGGTAACAGGTAAATATT+TGG | - | chr3_1:14551996-14552015 | Msa0350040:intron | 30.0% | |
AGGGTAACAGGTAAATATTT+GGG | - | chr3_1:14551997-14552016 | Msa0350040:intron | 30.0% | |
GATTATATTTGCCGAACAAA+AGG | - | chr3_1:14552102-14552121 | Msa0350040:intron | 30.0% | |
!! | TGTCTATACTTGTTGTGAAT+GGG | + | chr3_1:14552241-14552260 | None:intergenic | 30.0% |
!! | TTGTCTATACTTGTTGTGAA+TGG | + | chr3_1:14552242-14552261 | None:intergenic | 30.0% |
TTAACTAACCTGTGATTAAG+AGG | + | chr3_1:14552427-14552446 | None:intergenic | 30.0% | |
!!! | TAGGGTTTTGTTCTCTATTT+AGG | - | chr3_1:14552462-14552481 | Msa0350040:intron | 30.0% |
!!! | AGGGTTTTGTTCTCTATTTA+GGG | - | chr3_1:14552463-14552482 | Msa0350040:intron | 30.0% |
ATCCATCGCAATAGATTATA+AGG | - | chr3_1:14552932-14552951 | Msa0350040:intron | 30.0% | |
TTCTTTCAAGAACAGATGTT+TGG | + | chr3_1:14553114-14553133 | None:intergenic | 30.0% | |
GAAATCAACATAAGCTATAG+TGG | + | chr3_1:14553417-14553436 | None:intergenic | 30.0% | |
TGCTCTTGGAATTTATTTGA+CGG | - | chr3_1:14553639-14553658 | Msa0350040:CDS | 30.0% | |
TGTATATTTCAGCACAAAGT+AGG | - | chr3_1:14553757-14553776 | Msa0350040:CDS | 30.0% | |
GTATATTTCAGCACAAAGTA+GGG | - | chr3_1:14553758-14553777 | Msa0350040:CDS | 30.0% | |
!! | CAAAAGTTTTGTCACATACA+CGG | + | chr3_1:14553901-14553920 | None:intergenic | 30.0% |
CGACTAAAGAAGTGAATTTA+TGG | - | chr3_1:14554081-14554100 | Msa0350040:intron | 30.0% | |
GAGGAAGAAGTTCTTTAATA+AGG | + | chr3_1:14548448-14548467 | None:intergenic | 30.0% | |
AGGAAAATGTACATAGAGAA+TGG | + | chr3_1:14548701-14548720 | None:intergenic | 30.0% | |
AATCTGAGTTACTACATTAC+AGG | - | chr3_1:14554453-14554472 | Msa0350040:intron | 30.0% | |
TAATCAGAAATAAGAAAGGG+TGG | + | chr3_1:14554763-14554782 | None:intergenic | 30.0% | |
AGCACAATTTGGATTGACAA+TGG | + | chr3_1:14547580-14547599 | None:intergenic | 35.0% | |
!! | GACAAGATTCTTTTGAAGGA+AGG | + | chr3_1:14547799-14547818 | None:intergenic | 35.0% |
! | GGAAGACAAGATTCTTTTGA+AGG | + | chr3_1:14547803-14547822 | None:intergenic | 35.0% |
TTTGGTCATGAAATCAACAG+AGG | + | chr3_1:14547845-14547864 | None:intergenic | 35.0% | |
!! | TCTGTTGATTTCATGACCAA+AGG | - | chr3_1:14547844-14547863 | Msa0350040:CDS | 35.0% |
ATTTCATGACCAAAGGTTTG+TGG | - | chr3_1:14547851-14547870 | Msa0350040:CDS | 35.0% | |
AGATATGTACCACAAACCTT+TGG | + | chr3_1:14547863-14547882 | None:intergenic | 35.0% | |
GACAGATTGCTGTGAAAAAA+AGG | + | chr3_1:14547887-14547906 | None:intergenic | 35.0% | |
!!! | CCCTAAATTTTCTGGTTAGT+TGG | - | chr3_1:14548004-14548023 | Msa0350040:CDS | 35.0% |
TGCTAGAAAACAATAAAGGG+AGG | + | chr3_1:14548240-14548259 | None:intergenic | 35.0% | |
! | GTTGATTCATCTACTGATCT+TGG | + | chr3_1:14548470-14548489 | None:intergenic | 35.0% |
TTCCTTCCAAATGCAAAAGA+TGG | - | chr3_1:14548716-14548735 | Msa0350040:intron | 35.0% | |
! | AAATGCAAAAGATGGCTTGT+CGG | - | chr3_1:14548724-14548743 | Msa0350040:intron | 35.0% |
GAGTGATCTTAGCAGTAAAT+TGG | - | chr3_1:14549169-14549188 | Msa0350040:CDS | 35.0% | |
CAGGTTCCCTATTTATCTTA+TGG | + | chr3_1:14549199-14549218 | None:intergenic | 35.0% | |
! | TATGTGTTGATACACCGTAA+TGG | - | chr3_1:14549258-14549277 | Msa0350040:CDS | 35.0% |
CATAAACATATGGGATCAAG+TGG | + | chr3_1:14549408-14549427 | None:intergenic | 35.0% | |
! | TTTACGAATTGACTAGCTCT+TGG | + | chr3_1:14549536-14549555 | None:intergenic | 35.0% |
CTTGTGAATGTGATGTTCTT+AGG | + | chr3_1:14549567-14549586 | None:intergenic | 35.0% | |
CTAAGAACATCACATTCACA+AGG | - | chr3_1:14549565-14549584 | Msa0350040:intron | 35.0% | |
ATCAAGGACAAAGGAAACAT+GGG | + | chr3_1:14549649-14549668 | None:intergenic | 35.0% | |
TTAAAGGCTTGGATTCATCA+AGG | + | chr3_1:14549665-14549684 | None:intergenic | 35.0% | |
! | ACTTCACTAGTTTAAAGGCT+TGG | + | chr3_1:14549676-14549695 | None:intergenic | 35.0% |
! | GTTTAAGATGGTTCAAAGCA+TGG | - | chr3_1:14549760-14549779 | Msa0350040:intron | 35.0% |
GTTCAAAGCATGGAAGTTAA+GGG | - | chr3_1:14549770-14549789 | Msa0350040:intron | 35.0% | |
AGATATGTTTCTCTCCTTAG+AGG | - | chr3_1:14549955-14549974 | Msa0350040:intron | 35.0% | |
ATTCGGACAGAATTAAACGA+AGG | + | chr3_1:14550010-14550029 | None:intergenic | 35.0% | |
! | GCTCTGAGTTCAAAAGAATT+CGG | + | chr3_1:14550138-14550157 | None:intergenic | 35.0% |
TTTGAACTCAGAGCATAACA+AGG | - | chr3_1:14550144-14550163 | Msa0350040:intron | 35.0% | |
TCAAATTGGGAGAATTCTAG+AGG | + | chr3_1:14550397-14550416 | None:intergenic | 35.0% | |
! | TCTAGAATTCTCCCAATTTG+AGG | - | chr3_1:14550396-14550415 | Msa0350040:intron | 35.0% |
AATAACCACTGCATCTGAAA+TGG | + | chr3_1:14550426-14550445 | None:intergenic | 35.0% | |
ATTTCAGATGCAGTGGTTAT+TGG | - | chr3_1:14550425-14550444 | Msa0350040:intron | 35.0% | |
CTGAAAATTCAGTGTGTTTG+TGG | + | chr3_1:14550500-14550519 | None:intergenic | 35.0% | |
! | CACAAACACACTGAATTTTC+AGG | - | chr3_1:14550498-14550517 | Msa0350040:intron | 35.0% |
! | TCAATTTTCTGCACAACACA+AGG | - | chr3_1:14550531-14550550 | Msa0350040:intron | 35.0% |
! | CAATTTTCTGCACAACACAA+GGG | - | chr3_1:14550532-14550551 | Msa0350040:intron | 35.0% |
TAGGAGGATTGTAGAAAACA+AGG | - | chr3_1:14550591-14550610 | Msa0350040:intron | 35.0% | |
CAAGGATCGTATAAGAAAGA+AGG | - | chr3_1:14550609-14550628 | Msa0350040:intron | 35.0% | |
TGAATACGAGAAATCAAGCT+TGG | - | chr3_1:14550650-14550669 | Msa0350040:intron | 35.0% | |
CCTATGAAATTGTCTAGGTT+AGG | + | chr3_1:14550840-14550859 | None:intergenic | 35.0% | |
CCTAACCTAGACAATTTCAT+AGG | - | chr3_1:14550837-14550856 | Msa0350040:intron | 35.0% | |
CAACACCTATGAAATTGTCT+AGG | + | chr3_1:14550845-14550864 | None:intergenic | 35.0% | |
ACATGGAATGAAGATGATCA+AGG | - | chr3_1:14550906-14550925 | Msa0350040:intron | 35.0% | |
ACATGTTTGAGTATGAGTTC+GGG | + | chr3_1:14550980-14550999 | None:intergenic | 35.0% | |
GACATGTTTGAGTATGAGTT+CGG | + | chr3_1:14550981-14551000 | None:intergenic | 35.0% | |
TCATTCATATCTCGTAGGTA+TGG | - | chr3_1:14551128-14551147 | Msa0350040:intron | 35.0% | |
ATACCCAAACTCAGTCAAAA+CGG | + | chr3_1:14551213-14551232 | None:intergenic | 35.0% | |
CTGTGTGAGTGAAATGATTT+AGG | + | chr3_1:14551380-14551399 | None:intergenic | 35.0% | |
CTGTGTGAGTGAAATGATTT+AGG | + | chr3_1:14551380-14551399 | None:intergenic | 35.0% | |
ATTATCCAGCAAAGAGATGA+TGG | + | chr3_1:14551603-14551622 | None:intergenic | 35.0% | |
AAGTATATGAGAGTAGGGTA+TGG | - | chr3_1:14551721-14551740 | Msa0350040:intron | 35.0% | |
AGTATATGAGAGTAGGGTAT+GGG | - | chr3_1:14551722-14551741 | Msa0350040:intron | 35.0% | |
ACAGGTAAATATTTGGGAGT+AGG | - | chr3_1:14552003-14552022 | Msa0350040:intron | 35.0% | |
CAGGTAAATATTTGGGAGTA+GGG | - | chr3_1:14552004-14552023 | Msa0350040:intron | 35.0% | |
AAATATTTGGGAGTAGGGTA+TGG | - | chr3_1:14552009-14552028 | Msa0350040:intron | 35.0% | |
AATATTTGGGAGTAGGGTAT+GGG | - | chr3_1:14552010-14552029 | Msa0350040:intron | 35.0% | |
AAATTCGTCATGAATAGGCA+TGG | + | chr3_1:14552045-14552064 | None:intergenic | 35.0% | |
ATACAATCCAAAATGCGGTT+CGG | - | chr3_1:14552080-14552099 | Msa0350040:intron | 35.0% | |
! | ATATAATCCGAACCGCATTT+TGG | + | chr3_1:14552090-14552109 | None:intergenic | 35.0% |
!! | AATATCGTGATGGATGAAGT+TGG | - | chr3_1:14552196-14552215 | Msa0350040:intron | 35.0% |
! | GATTAAGAGGAGAAGTATGA+TGG | + | chr3_1:14552414-14552433 | None:intergenic | 35.0% |
ATACTTCTCCTCTTAATCAC+AGG | - | chr3_1:14552416-14552435 | Msa0350040:intron | 35.0% | |
AATAAGCAAGAGATTTGAGG+TGG | + | chr3_1:14552571-14552590 | None:intergenic | 35.0% | |
! | AGCCTTATAATCTATTGCGA+TGG | + | chr3_1:14552937-14552956 | None:intergenic | 35.0% |
AAGACTATGGCTTTCAATAG+AGG | + | chr3_1:14552999-14553018 | None:intergenic | 35.0% | |
CTATTGAAAGCCATAGTCTT+TGG | - | chr3_1:14552999-14553018 | Msa0350040:intron | 35.0% | |
CTGATTAAGACCAAAGACTA+TGG | + | chr3_1:14553012-14553031 | None:intergenic | 35.0% | |
TCGGAGAAGAAAAAGAACAA+TGG | - | chr3_1:14553040-14553059 | Msa0350040:intron | 35.0% | |
AGTACAATTTGAAGAGACAG+TGG | + | chr3_1:14553161-14553180 | None:intergenic | 35.0% | |
AGATGACACGATTTCTTTGA+AGG | + | chr3_1:14553384-14553403 | None:intergenic | 35.0% | |
AATCGTGTCATCTAATTACG+AGG | - | chr3_1:14553391-14553410 | Msa0350040:CDS | 35.0% | |
CTGATTCTAGTGTAGAAAGT+AGG | - | chr3_1:14553666-14553685 | Msa0350040:CDS | 35.0% | |
CAGTGCGATAAAATTTGAAG+AGG | + | chr3_1:14553935-14553954 | None:intergenic | 35.0% | |
TGGGCTGAAAAAAAGACAAA+TGG | - | chr3_1:14554101-14554120 | Msa0350040:intron | 35.0% | |
GTTAAGCTATCAACTGATCT+TGG | + | chr3_1:14554149-14554168 | None:intergenic | 35.0% | |
TTCCTTCCAAATGCAAAAGA+TGG | - | chr3_1:14548716-14548735 | Msa0350040:intron | 35.0% | |
! | AAATGCAAAAGATGGCTTGT+CGG | - | chr3_1:14548724-14548743 | Msa0350040:intron | 35.0% |
AATTCACCTACTTCTTCTTC+AGG | + | chr3_1:14554488-14554507 | None:intergenic | 35.0% | |
TTCTGTCGAGAACAGATGTT+TGG | + | chr3_1:14547533-14547552 | None:intergenic | 40.0% | |
GTTGAGATGATCTGTGGATT+TGG | + | chr3_1:14547665-14547684 | None:intergenic | 40.0% | |
GAGATAGTTGAGATGATCTG+TGG | + | chr3_1:14547671-14547690 | None:intergenic | 40.0% | |
TCTCCTTTGTCAATGGTGTA+TGG | - | chr3_1:14547749-14547768 | Msa0350040:CDS | 40.0% | |
CTCCTTTGTCAATGGTGTAT+GGG | - | chr3_1:14547750-14547769 | Msa0350040:CDS | 40.0% | |
AACCCATACACCATTGACAA+AGG | + | chr3_1:14547755-14547774 | None:intergenic | 40.0% | |
GAAGGAAGGTTGAAGAGAAA+GGG | + | chr3_1:14547785-14547804 | None:intergenic | 40.0% | |
TGAAGGAAGGTTGAAGAGAA+AGG | + | chr3_1:14547786-14547805 | None:intergenic | 40.0% | |
GATTCATCTACTGATCTTGG+AGG | + | chr3_1:14548467-14548486 | None:intergenic | 40.0% | |
GATCAGTAGATGAATCAACC+AGG | - | chr3_1:14548471-14548490 | Msa0350040:intron | 40.0% | |
TGCATTAGTAAAGATGAGCC+TGG | + | chr3_1:14548492-14548511 | None:intergenic | 40.0% | |
! | CACTCTACTTTAAAGGAGCA+TGG | - | chr3_1:14548510-14548529 | Msa0350040:intron | 40.0% |
CTTCGTCTTCCGTATAAGAA+AGG | - | chr3_1:14548662-14548681 | Msa0350040:intron | 40.0% | |
! | AGCCATCTTTTGCATTTGGA+AGG | + | chr3_1:14548721-14548740 | None:intergenic | 40.0% |
! | GACAAGCCATCTTTTGCATT+TGG | + | chr3_1:14548725-14548744 | None:intergenic | 40.0% |
! | CTTTAGGAAGACGAAACTTG+TGG | + | chr3_1:14548793-14548812 | None:intergenic | 40.0% |
CGTCTTCCTAAAGTAGAAGT+AGG | - | chr3_1:14548800-14548819 | Msa0350040:intron | 40.0% | |
TCTGATATGCTGAAAGAGCT+AGG | - | chr3_1:14548869-14548888 | Msa0350040:intron | 40.0% | |
TCCTGGAGGTTTGACAAAAA+TGG | - | chr3_1:14548910-14548929 | Msa0350040:intron | 40.0% | |
!! | ACCATTTTTGTCAAACCTCC+AGG | + | chr3_1:14548914-14548933 | None:intergenic | 40.0% |
TGGAGGTTTGACAAAAATGG+TGG | - | chr3_1:14548913-14548932 | Msa0350040:intron | 40.0% | |
TGCTAAGATCACTCATGAAG+AGG | + | chr3_1:14549163-14549182 | None:intergenic | 40.0% | |
CATCAAGGACAAAGGAAACA+TGG | + | chr3_1:14549650-14549669 | None:intergenic | 40.0% | |
CTTGGATTCATCAAGGACAA+AGG | + | chr3_1:14549658-14549677 | None:intergenic | 40.0% | |
AGTTAGGCTTGGATTCATCA+AGG | + | chr3_1:14549716-14549735 | None:intergenic | 40.0% | |
GGTTCAAAGCATGGAAGTTA+AGG | - | chr3_1:14549769-14549788 | Msa0350040:intron | 40.0% | |
CTAACCTTCATGAACCTCTA+AGG | + | chr3_1:14549972-14549991 | None:intergenic | 40.0% | |
ATTCGGACAGAATGAAACGA+AGG | + | chr3_1:14550079-14550098 | None:intergenic | 40.0% | |
AGAATTCTCCCAATTTGAGG+AGG | - | chr3_1:14550399-14550418 | Msa0350040:intron | 40.0% | |
GAAATGGTCCTCCTCAAATT+GGG | + | chr3_1:14550410-14550429 | None:intergenic | 40.0% | |
TGAAATGGTCCTCCTCAAAT+TGG | + | chr3_1:14550411-14550430 | None:intergenic | 40.0% | |
AGATGCAGTGGTTATTGGAA+AGG | - | chr3_1:14550430-14550449 | Msa0350040:intron | 40.0% | |
AAGCTTGGATTCCTTGATAG+CGG | - | chr3_1:14550665-14550684 | Msa0350040:intron | 40.0% | |
GACTCAACTGTCTACTAAAC+TGG | + | chr3_1:14550730-14550749 | None:intergenic | 40.0% | |
AGACAGTTGAGTCATTGTAG+AGG | - | chr3_1:14550737-14550756 | Msa0350040:intron | 40.0% | |
CATGTTTGAGTATGAGTTCG+GGG | + | chr3_1:14550979-14550998 | None:intergenic | 40.0% | |
! | AAATTGGGTTTGGTTCGTGT+GGG | + | chr3_1:14551178-14551197 | None:intergenic | 40.0% |
ACGAACCAAACCCAATTTGA+CGG | - | chr3_1:14551180-14551199 | Msa0350040:intron | 40.0% | |
AAAACCCGTCAAATTGGGTT+TGG | + | chr3_1:14551188-14551207 | None:intergenic | 40.0% | |
!!! | TTACCCGTTTTGACTGAGTT+TGG | - | chr3_1:14551206-14551225 | Msa0350040:intron | 40.0% |
!!! | TACCCGTTTTGACTGAGTTT+GGG | - | chr3_1:14551207-14551226 | Msa0350040:intron | 40.0% |
TACCCAAACTCAGTCAAAAC+GGG | + | chr3_1:14551212-14551231 | None:intergenic | 40.0% | |
ACTGAGTTTGGGTATGAGTT+TGG | - | chr3_1:14551218-14551237 | Msa0350040:intron | 40.0% | |
CTGAGTTTGGGTATGAGTTT+GGG | - | chr3_1:14551219-14551238 | Msa0350040:intron | 40.0% | |
TCGATTTCAAAACACGGGTA+CGG | - | chr3_1:14551248-14551267 | Msa0350040:intron | 40.0% | |
! | AGTTGGGTTTGGTATGAGTT+CGG | + | chr3_1:14551303-14551322 | None:intergenic | 40.0% |
!! | TTCTACATTCGAGTTGGGTT+TGG | + | chr3_1:14551314-14551333 | None:intergenic | 40.0% |
CACTCACACAGTAAGAGTTT+CGG | - | chr3_1:14551479-14551498 | Msa0350040:intron | 40.0% | |
CCTTCCATATGTCACACTTT+CGG | - | chr3_1:14551543-14551562 | Msa0350040:intron | 40.0% | |
TATGGTGATAGAGAAGAGAG+AGG | + | chr3_1:14551569-14551588 | None:intergenic | 40.0% | |
! | ATGATGGCGATCGATGTATA+TGG | + | chr3_1:14551587-14551606 | None:intergenic | 40.0% |
AAAATTATCCACTGCTGGGA+TGG | - | chr3_1:14551673-14551692 | Msa0350040:intron | 40.0% | |
AAATTATCCACTGCTGGGAT+GGG | - | chr3_1:14551674-14551693 | Msa0350040:intron | 40.0% | |
ACGGGTAAGTATATGAGAGT+AGG | - | chr3_1:14551715-14551734 | Msa0350040:intron | 40.0% | |
CGGGTAAGTATATGAGAGTA+GGG | - | chr3_1:14551716-14551735 | Msa0350040:intron | 40.0% | |
TTCGATTTCTCATCCCCATT+AGG | - | chr3_1:14551967-14551986 | Msa0350040:intron | 40.0% | |
TTTCTCATCCCCATTAGGTA+TGG | - | chr3_1:14551972-14551991 | Msa0350040:intron | 40.0% | |
TTCTCATCCCCATTAGGTAT+GGG | - | chr3_1:14551973-14551992 | Msa0350040:intron | 40.0% | |
TTACCCTACCCATACCTAAT+GGG | + | chr3_1:14551984-14552003 | None:intergenic | 40.0% | |
ATATTTGGGAGTAGGGTATG+GGG | - | chr3_1:14552011-14552030 | Msa0350040:intron | 40.0% | |
GGCGAATACAATCCAAAATG+CGG | - | chr3_1:14552075-14552094 | Msa0350040:intron | 40.0% | |
AATGTAAGCGAAACGAGAGA+GGG | + | chr3_1:14552302-14552321 | None:intergenic | 40.0% | |
TTACATTCACTCGCATACTC+TGG | - | chr3_1:14552315-14552334 | Msa0350040:intron | 40.0% | |
! | TTCGTTTGCCTTGTTCACAA+AGG | - | chr3_1:14552597-14552616 | Msa0350040:intron | 40.0% |
AGCATCTTCCTTTGTGAACA+AGG | + | chr3_1:14552608-14552627 | None:intergenic | 40.0% | |
TCAATAGAGGTTTGAATGCC+TGG | + | chr3_1:14552986-14553005 | None:intergenic | 40.0% | |
!! | TTTCGTTGGTGATTGATTCG+CGG | + | chr3_1:14553070-14553089 | None:intergenic | 40.0% |
TAGGGAAACATTCGTTTCGT+TGG | + | chr3_1:14553084-14553103 | None:intergenic | 40.0% | |
CAGATGTTTGGCAATGCATA+GGG | + | chr3_1:14553102-14553121 | None:intergenic | 40.0% | |
ACAGATGTTTGGCAATGCAT+AGG | + | chr3_1:14553103-14553122 | None:intergenic | 40.0% | |
! | GATGATCAGTGGATTTAGAC+CGG | + | chr3_1:14553241-14553260 | None:intergenic | 40.0% |
GAGATAGTTGAGATGATCAG+TGG | + | chr3_1:14553252-14553271 | None:intergenic | 40.0% | |
GAAGGAAGGTTGAAGAGAAA+GGG | + | chr3_1:14547785-14547804 | None:intergenic | 40.0% | |
TGAAGGAAGGTTGAAGAGAA+AGG | + | chr3_1:14547786-14547805 | None:intergenic | 40.0% | |
! | GACACGATTTCTTTGAAGGA+AGG | + | chr3_1:14553380-14553399 | None:intergenic | 40.0% |
GGAAAAAAAAAAGCAGGGCA+TGG | + | chr3_1:14553490-14553509 | None:intergenic | 40.0% | |
AGGATGAAGTGTGTGATTCA+TGG | - | chr3_1:14553701-14553720 | Msa0350040:CDS | 40.0% | |
AAGCTATCAACTGATCTTGG+AGG | + | chr3_1:14554146-14554165 | None:intergenic | 40.0% | |
GCTAATGCGCTCTACTTTAA+AGG | - | chr3_1:14554182-14554201 | Msa0350040:intron | 40.0% | |
AATAAACTGCATCTCCTTGC+TGG | + | chr3_1:14554300-14554319 | None:intergenic | 40.0% | |
CTTCGTCTTCCGTATAAGAA+AGG | - | chr3_1:14548662-14548681 | Msa0350040:intron | 40.0% | |
! | AGCCATCTTTTGCATTTGGA+AGG | + | chr3_1:14548721-14548740 | None:intergenic | 40.0% |
! | GACAAGCCATCTTTTGCATT+TGG | + | chr3_1:14548725-14548744 | None:intergenic | 40.0% |
!! | CTTGTCGGCTTTGGTTAATA+AGG | - | chr3_1:14554421-14554440 | Msa0350040:intron | 40.0% |
AGTCTTCCTGAAGAAGAAGT+AGG | - | chr3_1:14554479-14554498 | Msa0350040:intron | 40.0% | |
TCTCATATGCTGAAAGAGCT+AGG | - | chr3_1:14554548-14554567 | Msa0350040:CDS | 40.0% | |
TCCTGGAGGTTTGACAAAAA+TGG | - | chr3_1:14548910-14548929 | Msa0350040:intron | 40.0% | |
!! | ACCATTTTTGTCAAACCTCC+AGG | + | chr3_1:14548914-14548933 | None:intergenic | 40.0% |
TGGAGGTTTGACAAAAATGG+TGG | - | chr3_1:14548913-14548932 | Msa0350040:intron | 40.0% | |
AGTTCGAAATCGAATACCCT+CGG | + | chr3_1:14554720-14554739 | None:intergenic | 40.0% | |
CTGATTAGAGAAGATTGGAC+TGG | - | chr3_1:14554776-14554795 | Msa0350040:CDS | 40.0% | |
ACTGGAACCATTCTCTTTGT+TGG | - | chr3_1:14554794-14554813 | Msa0350040:CDS | 40.0% | |
CACTTGTCCAACAAAGAGAA+TGG | + | chr3_1:14554804-14554823 | None:intergenic | 40.0% | |
GTGCTAAGTATCATTGCTGC+TGG | - | chr3_1:14547595-14547614 | Msa0350040:CDS | 45.0% | |
! | TATCATTGCTGCTGGTTGTG+AGG | - | chr3_1:14547603-14547622 | Msa0350040:CDS | 45.0% |
! | ATCATTGCTGCTGGTTGTGA+GGG | - | chr3_1:14547604-14547623 | Msa0350040:CDS | 45.0% |
TCGAGAAGCTGTTGTTGTGT+GGG | + | chr3_1:14547631-14547650 | None:intergenic | 45.0% | |
GATGATCTGTGGATTTGGAC+TGG | + | chr3_1:14547660-14547679 | None:intergenic | 45.0% | |
TTCGTCACATGGCACATACA+TGG | + | chr3_1:14548154-14548173 | None:intergenic | 45.0% | |
TGGGCTGAAAAAGAGACGAA+TGG | - | chr3_1:14548422-14548441 | Msa0350040:intron | 45.0% | |
ATCTCCTCGCTAGTCATGAA+GGG | + | chr3_1:14548608-14548627 | None:intergenic | 45.0% | |
!! | AAAAGATGGCTTGTCGGCTT+TGG | - | chr3_1:14548730-14548749 | Msa0350040:intron | 45.0% |
!! | CTTGTCGGCTTTGGTTAAGA+AGG | - | chr3_1:14548739-14548758 | Msa0350040:intron | 45.0% |
TATGCTGAAAGAGCTAGGAG+TGG | - | chr3_1:14548874-14548893 | Msa0350040:intron | 45.0% | |
!! | GTGGTTTTACCTTTCACTCC+TGG | - | chr3_1:14548893-14548912 | Msa0350040:intron | 45.0% |
! | GTTTTACCTTTCACTCCTGG+AGG | - | chr3_1:14548896-14548915 | Msa0350040:intron | 45.0% |
CGCATGGATCGTATCCATTA+CGG | + | chr3_1:14549275-14549294 | None:intergenic | 45.0% | |
! | ACGAATTGACTAGCTCTTGG+TGG | + | chr3_1:14549533-14549552 | None:intergenic | 45.0% |
GCTTGGATTCATCAAGGACA+AGG | + | chr3_1:14549659-14549678 | None:intergenic | 45.0% | |
CTCTCCTTAGAGGTTCATGA+AGG | - | chr3_1:14549965-14549984 | Msa0350040:intron | 45.0% | |
!!! | GTTTTGGCTGGGACAGAATT+CGG | + | chr3_1:14550027-14550046 | None:intergenic | 45.0% |
!! | TGGAAAGGCTTTGAAAGCCT+CGG | - | chr3_1:14550445-14550464 | Msa0350040:intron | 45.0% |
GGTTCATCAAACCGCTATCA+AGG | + | chr3_1:14550679-14550698 | None:intergenic | 45.0% | |
TTTGAGTATGAGTTCGGGGT+GGG | + | chr3_1:14550975-14550994 | None:intergenic | 45.0% | |
! | CAAATTGGGTTTGGTTCGTG+TGG | + | chr3_1:14551179-14551198 | None:intergenic | 45.0% |
CGAACCAAACCCAATTTGAC+GGG | - | chr3_1:14551181-14551200 | Msa0350040:intron | 45.0% | |
CGGGTAAAACCCGTCAAATT+GGG | + | chr3_1:14551193-14551212 | None:intergenic | 45.0% | |
ACGGGTAAAACCCGTCAAAT+TGG | + | chr3_1:14551194-14551213 | None:intergenic | 45.0% | |
CGATTTCAAAACACGGGTAC+GGG | - | chr3_1:14551249-14551268 | Msa0350040:intron | 45.0% | |
GTTTGGTATGAGTTCGGAGT+GGG | + | chr3_1:14551297-14551316 | None:intergenic | 45.0% | |
CACTCACACAGTCAGAGTTT+CGG | - | chr3_1:14551389-14551408 | Msa0350040:intron | 45.0% | |
! | CCGAAAGTGTGACATATGGA+AGG | + | chr3_1:14551546-14551565 | None:intergenic | 45.0% |
AATTATCCACTGCTGGGATG+GGG | - | chr3_1:14551675-14551694 | Msa0350040:intron | 45.0% | |
ATGAGAGTAGGGTATGGGAA+CGG | - | chr3_1:14551727-14551746 | Msa0350040:intron | 45.0% | |
! | GTGATGATGAAGAGAGACTG+AGG | + | chr3_1:14551793-14551812 | None:intergenic | 45.0% |
ATAATCATCCACTGCAGGGA+TGG | - | chr3_1:14551900-14551919 | Msa0350040:intron | 45.0% | |
TAATCATCCACTGCAGGGAT+GGG | - | chr3_1:14551901-14551920 | Msa0350040:intron | 45.0% | |
ATCCCCATTAGGTATGGGTA+GGG | - | chr3_1:14551978-14551997 | Msa0350040:intron | 45.0% | |
TACCCTACCCATACCTAATG+GGG | + | chr3_1:14551983-14552002 | None:intergenic | 45.0% | |
GTTACCCTACCCATACCTAA+TGG | + | chr3_1:14551985-14552004 | None:intergenic | 45.0% | |
TTAGGTATGGGTAGGGTAAC+AGG | - | chr3_1:14551985-14552004 | Msa0350040:intron | 45.0% | |
GAATGTAAGCGAAACGAGAG+AGG | + | chr3_1:14552303-14552322 | None:intergenic | 45.0% | |
GGAGAATAGAGAAGTAGGCA+GGG | + | chr3_1:14552376-14552395 | None:intergenic | 45.0% | |
TGATGGAAGAACAGATCGTG+CGG | + | chr3_1:14552397-14552416 | None:intergenic | 45.0% | |
TCGAGAAGCTGTTGTTGTGT+GGG | + | chr3_1:14547631-14547650 | None:intergenic | 45.0% | |
CACGACAGAAACAAGCTGAA+AGG | + | chr3_1:14553276-14553295 | None:intergenic | 45.0% | |
! | AGGGCATGGATTGAAAGAGT+GGG | + | chr3_1:14553476-14553495 | None:intergenic | 45.0% |
CGCATTAGCAAAGATGAGTC+TGG | + | chr3_1:14554171-14554190 | None:intergenic | 45.0% | |
! | CGCTCTACTTTAAAGGAGCA+TGG | - | chr3_1:14554189-14554208 | Msa0350040:intron | 45.0% |
! | TCACCTTTTGAATGGCAGCT+CGG | - | chr3_1:14554253-14554272 | Msa0350040:intron | 45.0% |
!! | AAAAGATGGCTTGTCGGCTT+TGG | - | chr3_1:14548730-14548749 | Msa0350040:intron | 45.0% |
! | GTCGGCTTTGGTTAATAAGG+TGG | - | chr3_1:14554424-14554443 | Msa0350040:intron | 45.0% |
TATGCTGAAAGAGCTAGGAG+TGG | - | chr3_1:14548874-14548893 | Msa0350040:intron | 45.0% | |
!! | GTGGTTTTACCTTTCACTCC+TGG | - | chr3_1:14548893-14548912 | Msa0350040:intron | 45.0% |
! | GTTTTACCTTTCACTCCTGG+AGG | - | chr3_1:14548896-14548915 | Msa0350040:intron | 45.0% |
TAGTGCTGCAATATGTTCCG+AGG | - | chr3_1:14554700-14554719 | Msa0350040:CDS | 45.0% | |
AGTGCTGCAATATGTTCCGA+GGG | - | chr3_1:14554701-14554720 | Msa0350040:CDS | 45.0% | |
!!! | TTTTTTATATTTATATAAAG+GGG | + | chr3_1:14551350-14551369 | None:intergenic | 5.0% |
!!! | GATTTTTTATATTTATATAA+AGG | + | chr3_1:14551352-14551371 | None:intergenic | 5.0% |
GTCGAGAAGCTGTTGTTGTG+TGG | + | chr3_1:14547632-14547651 | None:intergenic | 50.0% | |
! | GATCTGTGGATTTGGACTGG+AGG | + | chr3_1:14547657-14547676 | None:intergenic | 50.0% |
CACGACAGAAACAAGCTGAG+AGG | + | chr3_1:14547695-14547714 | None:intergenic | 50.0% | |
CCATTGACAAAGGAGAGTCG+AGG | + | chr3_1:14547745-14547764 | None:intergenic | 50.0% | |
CCTCGACTCTCCTTTGTCAA+TGG | - | chr3_1:14547742-14547761 | Msa0350040:CDS | 50.0% | |
TGACTGAGCTGCCATTCAGA+AGG | + | chr3_1:14548580-14548599 | None:intergenic | 50.0% | |
TCTGAATGGCAGCTCAGTCA+AGG | - | chr3_1:14548580-14548599 | Msa0350040:intron | 50.0% | |
CATCTCCTCGCTAGTCATGA+AGG | + | chr3_1:14548609-14548628 | None:intergenic | 50.0% | |
GTCAAACCTCCAGGAGTGAA+AGG | + | chr3_1:14548905-14548924 | None:intergenic | 50.0% | |
CCTTACATACCACTCACGCA+TGG | + | chr3_1:14549291-14549310 | None:intergenic | 50.0% | |
CCATGCGTGAGTGGTATGTA+AGG | - | chr3_1:14549288-14549307 | Msa0350040:CDS | 50.0% | |
GCGTGAGTGGTATGTAAGGA+AGG | - | chr3_1:14549292-14549311 | Msa0350040:CDS | 50.0% | |
GAGGACCATTTCAGATGCAG+TGG | - | chr3_1:14550418-14550437 | Msa0350040:intron | 50.0% | |
GTTTGAGTATGAGTTCGGGG+TGG | + | chr3_1:14550976-14550995 | None:intergenic | 50.0% | |
GGCAACAAAACCCATATCCG+CGG | - | chr3_1:14551149-14551168 | Msa0350040:intron | 50.0% | |
TTCAAAACACGGGTACGGGA+CGG | - | chr3_1:14551253-14551272 | Msa0350040:intron | 50.0% | |
! | GGTTTGGTATGAGTTCGGAG+TGG | + | chr3_1:14551298-14551317 | None:intergenic | 50.0% |
! | GAGGCCGAAAGTGTGACATA+TGG | + | chr3_1:14551550-14551569 | None:intergenic | 50.0% |
GATCGCCATCATCTCTTTGC+TGG | - | chr3_1:14551595-14551614 | Msa0350040:intron | 50.0% | |
TGAGAGTAGGGTATGGGAAC+GGG | - | chr3_1:14551728-14551747 | Msa0350040:intron | 50.0% | |
AGAGACTGAGGCATGGCAAT+GGG | + | chr3_1:14551781-14551800 | None:intergenic | 50.0% | |
GATGAAGAGAGACTGAGGCA+TGG | + | chr3_1:14551788-14551807 | None:intergenic | 50.0% | |
AATCATCCACTGCAGGGATG+GGG | - | chr3_1:14551902-14551921 | Msa0350040:intron | 50.0% | |
CATCCCCATTAGGTATGGGT+AGG | - | chr3_1:14551977-14551996 | Msa0350040:intron | 50.0% | |
CGGAGAATAGAGAAGTAGGC+AGG | + | chr3_1:14552377-14552396 | None:intergenic | 50.0% | |
CGTGCGGAGAATAGAGAAGT+AGG | + | chr3_1:14552381-14552400 | None:intergenic | 50.0% | |
ATCGGATTTCTTGCAGCACC+AGG | - | chr3_1:14552965-14552984 | Msa0350040:intron | 50.0% | |
GTACTAAGCATCATCGCTGC+TGG | - | chr3_1:14553176-14553195 | Msa0350040:intron | 50.0% | |
GTCGAGAAGCTGTTGTTGTG+TGG | + | chr3_1:14547632-14547651 | None:intergenic | 50.0% | |
AACAGCTTCTCGACTTCCTC+CGG | - | chr3_1:14547638-14547657 | Msa0350040:CDS | 50.0% | |
! | GATCAGTGGATTTAGACCGG+AGG | + | chr3_1:14553238-14553257 | None:intergenic | 50.0% |
TCTCCTTCGTCAGTGGTGTA+TGG | - | chr3_1:14553330-14553349 | Msa0350040:CDS | 50.0% | |
CTCCTTCGTCAGTGGTGTAT+GGG | - | chr3_1:14553331-14553350 | Msa0350040:CDS | 50.0% | |
AACCCATACACCACTGACGA+AGG | + | chr3_1:14553336-14553355 | None:intergenic | 50.0% | |
GGGGGTAGACAAACATACCT+TGG | + | chr3_1:14553444-14553463 | None:intergenic | 50.0% | |
TGGATTGAAAGAGTGGGGGT+GGG | + | chr3_1:14553470-14553489 | None:intergenic | 50.0% | |
! | ATGGATTGAAAGAGTGGGGG+TGG | + | chr3_1:14553471-14553490 | None:intergenic | 50.0% |
! | GGCATGGATTGAAAGAGTGG+GGG | + | chr3_1:14553474-14553493 | None:intergenic | 50.0% |
! | GGGCATGGATTGAAAGAGTG+GGG | + | chr3_1:14553475-14553494 | None:intergenic | 50.0% |
! | CAGGGCATGGATTGAAAGAG+TGG | + | chr3_1:14553477-14553496 | None:intergenic | 50.0% |
TGACCGAGCTGCCATTCAAA+AGG | + | chr3_1:14554259-14554278 | None:intergenic | 50.0% | |
TTTGAATGGCAGCTCGGTCA+AGG | - | chr3_1:14554259-14554278 | Msa0350040:intron | 50.0% | |
TCCTTGCTGGTCGTCATGAA+GGG | + | chr3_1:14554287-14554306 | None:intergenic | 50.0% | |
GTCAAACCTCCAGGAGTGAA+AGG | + | chr3_1:14548905-14548924 | None:intergenic | 50.0% | |
GGATACGATCCATGCGTGAG+TGG | - | chr3_1:14549279-14549298 | Msa0350040:CDS | 55.0% | |
TCAAAACACGGGTACGGGAC+GGG | - | chr3_1:14551254-14551273 | Msa0350040:intron | 55.0% | |
GAGAGTAGGGTATGGGAACG+GGG | - | chr3_1:14551729-14551748 | Msa0350040:intron | 55.0% | |
AGACTGAGGCATGGCAATGG+GGG | + | chr3_1:14551779-14551798 | None:intergenic | 55.0% | |
GAGACTGAGGCATGGCAATG+GGG | + | chr3_1:14551780-14551799 | None:intergenic | 55.0% | |
GAGAGACTGAGGCATGGCAA+TGG | + | chr3_1:14551782-14551801 | None:intergenic | 55.0% | |
AAGGATACCCGAACCTGTCG+AGG | - | chr3_1:14551932-14551951 | Msa0350040:intron | 55.0% | |
ATACCCGAACCTGTCGAGGA+CGG | - | chr3_1:14551936-14551955 | Msa0350040:intron | 55.0% | |
ATCTCCGTCCTCGACAGGTT+CGG | + | chr3_1:14551943-14551962 | None:intergenic | 55.0% | |
ATCTCATCTCCGTCCTCGAC+AGG | + | chr3_1:14551948-14551967 | None:intergenic | 55.0% | |
!! | CTCTGGTTCTCTCTCACAGC+AGG | - | chr3_1:14552332-14552351 | Msa0350040:intron | 55.0% |
!! | GAAGTAGGCAGGGCTTTGAG+TGG | + | chr3_1:14552366-14552385 | None:intergenic | 55.0% |
!! | ATCATCGCTGCTGGCTCTGA+GGG | - | chr3_1:14553185-14553204 | Msa0350040:intron | 55.0% |
GGATTGAAAGAGTGGGGGTG+GGG | + | chr3_1:14553469-14553488 | None:intergenic | 55.0% | |
TCCCTTCATGACGACCAGCA+AGG | - | chr3_1:14554283-14554302 | Msa0350040:intron | 55.0% | |
CTCCTTGCTGGTCGTCATGA+AGG | + | chr3_1:14554288-14554307 | None:intergenic | 55.0% | |
TCCACCTGTGGGAGCAGCAT+CGG | + | chr3_1:14547722-14547741 | None:intergenic | 60.0% | |
GAGAGTCGAGGTCCACCTGT+GGG | + | chr3_1:14547733-14547752 | None:intergenic | 60.0% | |
GGCTCCCTTCATGACTAGCG+AGG | - | chr3_1:14548601-14548620 | Msa0350040:intron | 60.0% | |
GAAGCTGCTGCAGCTAGTGC+TGG | - | chr3_1:14549016-14549035 | Msa0350040:CDS | 60.0% | |
GTGTGGGTAGCCGCGGATAT+GGG | + | chr3_1:14551162-14551181 | None:intergenic | 60.0% | |
! | TTGGTTCGTGTGGGTAGCCG+CGG | + | chr3_1:14551169-14551188 | None:intergenic | 60.0% |
!! | GGGACGGGTAACGGGGATAT+AGG | - | chr3_1:14551269-14551288 | Msa0350040:intron | 60.0% |
ATCCACTGCTGGGATGGGGA+TGG | - | chr3_1:14551679-14551698 | Msa0350040:intron | 60.0% | |
TCCACTGCTGGGATGGGGAT+GGG | - | chr3_1:14551680-14551699 | Msa0350040:intron | 60.0% | |
GTAGGGTATGGGAACGGGGA+AGG | - | chr3_1:14551733-14551752 | Msa0350040:intron | 60.0% | |
TCTCATCCCCATCCCTGCAG+TGG | + | chr3_1:14551911-14551930 | None:intergenic | 60.0% | |
GCAGGGATGGGGATGAGACA+AGG | - | chr3_1:14551913-14551932 | Msa0350040:intron | 60.0% | |
TCTCCGTCCTCGACAGGTTC+GGG | + | chr3_1:14551942-14551961 | None:intergenic | 60.0% | |
TGGGAGTAGGGTATGGGGAC+AGG | - | chr3_1:14552016-14552035 | Msa0350040:intron | 60.0% | |
!! | GTAGGCAGGGCTTTGAGTGG+TGG | + | chr3_1:14552363-14552382 | None:intergenic | 60.0% |
!! | CATCATCGCTGCTGGCTCTG+AGG | - | chr3_1:14553184-14553203 | Msa0350040:intron | 60.0% |
GAGAGTCGAGGTCCACCTGT+GGG | + | chr3_1:14547733-14547752 | None:intergenic | 60.0% | |
CCACTGACGAAGGAGAGTCG+AGG | + | chr3_1:14553326-14553345 | None:intergenic | 60.0% | |
CCTCGACTCTCCTTCGTCAG+TGG | - | chr3_1:14553323-14553342 | Msa0350040:CDS | 60.0% | |
TGAAAGAGTGGGGGTGGGGT+GGG | + | chr3_1:14553465-14553484 | None:intergenic | 60.0% | |
TTGAAAGAGTGGGGGTGGGG+TGG | + | chr3_1:14553466-14553485 | None:intergenic | 60.0% | |
CTCTCCGATGCTGCTCCCAC+AGG | - | chr3_1:14547715-14547734 | Msa0350040:CDS | 65.0% | |
TCCGATGCTGCTCCCACAGG+TGG | - | chr3_1:14547718-14547737 | Msa0350040:CDS | 65.0% | |
GGAGAGTCGAGGTCCACCTG+TGG | + | chr3_1:14547734-14547753 | None:intergenic | 65.0% | |
CGTGTGGGTAGCCGCGGATA+TGG | + | chr3_1:14551163-14551182 | None:intergenic | 65.0% | |
CACGGGTACGGGACGGGTAA+CGG | - | chr3_1:14551260-14551279 | Msa0350040:intron | 65.0% | |
ACGGGTACGGGACGGGTAAC+GGG | - | chr3_1:14551261-14551280 | Msa0350040:intron | 65.0% | |
CCACTGCTGGGATGGGGATG+GGG | - | chr3_1:14551681-14551700 | Msa0350040:intron | 65.0% | |
GGATGGGGCGGGAAGGGTAA+CGG | - | chr3_1:14551696-14551715 | Msa0350040:intron | 65.0% | |
GATGGGGCGGGAAGGGTAAC+GGG | - | chr3_1:14551697-14551716 | Msa0350040:intron | 65.0% | |
TGAGGCATGGCAATGGGGGC+GGG | + | chr3_1:14551775-14551794 | None:intergenic | 65.0% | |
CTGAGGCATGGCAATGGGGG+CGG | + | chr3_1:14551776-14551795 | None:intergenic | 65.0% | |
TCCACCTGTGGGAGCAGCGT+CGG | + | chr3_1:14553303-14553322 | None:intergenic | 65.0% | |
GGAGAGTCGAGGTCCACCTG+TGG | + | chr3_1:14547734-14547753 | None:intergenic | 65.0% | |
AAAGAGTGGGGGTGGGGTGG+GGG | + | chr3_1:14553463-14553482 | None:intergenic | 65.0% | |
GAAAGAGTGGGGGTGGGGTG+GGG | + | chr3_1:14553464-14553483 | None:intergenic | 65.0% | |
CGGGTACGGGACGGGTAACG+GGG | - | chr3_1:14551262-14551281 | Msa0350040:intron | 70.0% | |
CCCCATCCCCATCCCAGCAG+TGG | + | chr3_1:14551684-14551703 | None:intergenic | 70.0% | |
CTGCTGGGATGGGGATGGGG+CGG | - | chr3_1:14551684-14551703 | Msa0350040:intron | 70.0% | |
TGCTGGGATGGGGATGGGGC+GGG | - | chr3_1:14551685-14551704 | Msa0350040:intron | 70.0% | |
GGATGGGGATGGGGCGGGAA+GGG | - | chr3_1:14551690-14551709 | Msa0350040:intron | 70.0% | |
ATGGCAATGGGGGCGGGGTG+GGG | + | chr3_1:14551769-14551788 | None:intergenic | 70.0% | |
CATGGCAATGGGGGCGGGGT+GGG | + | chr3_1:14551770-14551789 | None:intergenic | 70.0% | |
GAGGCATGGCAATGGGGGCG+GGG | + | chr3_1:14551774-14551793 | None:intergenic | 70.0% | |
CTCTCCGACGCTGCTCCCAC+AGG | - | chr3_1:14553296-14553315 | Msa0350040:CDS | 70.0% | |
TCCGACGCTGCTCCCACAGG+TGG | - | chr3_1:14553299-14553318 | Msa0350040:CDS | 70.0% | |
AAGAGTGGGGGTGGGGTGGG+GGG | + | chr3_1:14553462-14553481 | None:intergenic | 70.0% | |
GGGATGGGGATGGGGCGGGA+AGG | - | chr3_1:14551689-14551708 | Msa0350040:intron | 75.0% | |
AATGGGGGCGGGGTGGGGAC+GGG | + | chr3_1:14551764-14551783 | None:intergenic | 75.0% | |
CAATGGGGGCGGGGTGGGGA+CGG | + | chr3_1:14551765-14551784 | None:intergenic | 75.0% | |
GCATGGCAATGGGGGCGGGG+TGG | + | chr3_1:14551771-14551790 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 14547526 | 14554844 | 14547526 | ID=Msa0350040;Name=Msa0350040 |
chr3_1 | mRNA | 14547526 | 14554844 | 14547526 | ID=Msa0350040-mRNA-1;Parent=Msa0350040;Name=Msa0350040-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.33|0|1|0.66|0.5|4|0|772 |
chr3_1 | exon | 14554505 | 14554844 | 14554505 | ID=Msa0350040-mRNA-1:exon:3619;Parent=Msa0350040-mRNA-1 |
chr3_1 | exon | 14553220 | 14553959 | 14553220 | ID=Msa0350040-mRNA-1:exon:3618;Parent=Msa0350040-mRNA-1 |
chr3_1 | exon | 14548925 | 14549389 | 14548925 | ID=Msa0350040-mRNA-1:exon:3617;Parent=Msa0350040-mRNA-1 |
chr3_1 | exon | 14547526 | 14548299 | 14547526 | ID=Msa0350040-mRNA-1:exon:3616;Parent=Msa0350040-mRNA-1 |
chr3_1 | CDS | 14554505 | 14554844 | 14554505 | ID=Msa0350040-mRNA-1:cds;Parent=Msa0350040-mRNA-1 |
chr3_1 | CDS | 14553220 | 14553959 | 14553220 | ID=Msa0350040-mRNA-1:cds;Parent=Msa0350040-mRNA-1 |
chr3_1 | CDS | 14548925 | 14549389 | 14548925 | ID=Msa0350040-mRNA-1:cds;Parent=Msa0350040-mRNA-1 |
chr3_1 | CDS | 14547526 | 14548299 | 14547526 | ID=Msa0350040-mRNA-1:cds;Parent=Msa0350040-mRNA-1 |
Gene Sequence |
Protein sequence |