AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0353030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0353030 MtrunA17_Chr3g0088461 97.085 343 6 3 1 339 1 343 0.0 676
Msa0353030 MtrunA17_Chr4g0032401 44.687 367 134 12 3 337 1 330 1.91e-84 258
Msa0353030 MtrunA17_Chr2g0328771 46.746 338 150 9 3 332 1 316 1.03e-76 238
Msa0353030 MtrunA17_Chr1g0193371 78.899 109 23 0 19 127 9 117 4.95e-59 194
Msa0353030 MtrunA17_Chr1g0193801 76.147 109 26 0 19 127 9 117 6.78e-58 192
Msa0353030 MtrunA17_Chr1g0211161 59.146 164 63 3 19 180 10 171 1.92e-57 186
Msa0353030 MtrunA17_Chr2g0330041 73.394 109 29 0 18 126 8 116 2.65e-57 191
Msa0353030 MtrunA17_Chr8g0342541 72.477 109 30 0 18 126 8 116 3.54e-57 189
Msa0353030 MtrunA17_Chr3g0117091 77.778 108 24 0 19 126 9 116 4.17e-57 188
Msa0353030 MtrunA17_Chr7g0270891 76.147 109 26 0 19 127 9 117 4.63e-57 189
Msa0353030 MtrunA17_Chr8g0342521 73.394 109 29 0 18 126 8 116 8.13e-57 187
Msa0353030 MtrunA17_Chr4g0058631 76.852 108 25 0 19 126 9 116 1.23e-56 187
Msa0353030 MtrunA17_Chr8g0387421 67.273 110 36 0 18 127 8 117 1.52e-54 181
Msa0353030 MtrunA17_Chr8g0342481 66.942 121 39 1 18 137 8 128 3.10e-54 182
Msa0353030 MtrunA17_Chr5g0397231 69.903 103 31 0 18 120 8 110 1.90e-53 179
Msa0353030 MtrunA17_Chr7g0271241 60.403 149 44 2 19 152 9 157 2.00e-53 180
Msa0353030 MtrunA17_Chr2g0309911 42.986 221 111 5 18 229 7 221 2.19e-52 175
Msa0353030 MtrunA17_Chr4g0037141 34.688 320 150 9 19 325 9 282 1.65e-50 169
Msa0353030 MtrunA17_Chr1g0203441 70.370 108 32 0 19 126 10 117 5.62e-50 167
Msa0353030 MtrunA17_Chr6g0470971 66.055 109 37 0 17 125 9 117 5.48e-48 163
Msa0353030 MtrunA17_Chr5g0435101 58.871 124 42 2 3 126 1 115 5.59e-48 160
Msa0353030 MtrunA17_Chr3g0131121 64.815 108 38 0 19 126 9 116 6.02e-48 163
Msa0353030 MtrunA17_Chr2g0323411 66.972 109 36 0 18 126 8 116 6.70e-48 164
Msa0353030 MtrunA17_Chr2g0281071 67.619 105 34 0 22 126 13 117 7.14e-48 164
Msa0353030 MtrunA17_Chr3g0115821 65.138 109 38 0 18 126 8 116 9.33e-48 164
Msa0353030 MtrunA17_Chr2g0323351 55.303 132 56 1 18 146 8 139 3.29e-47 160
Msa0353030 MtrunA17_Chr4g0048511 66.667 105 35 0 22 126 13 117 4.96e-47 162
Msa0353030 MtrunA17_Chr8g0385321 61.261 111 43 0 24 134 14 124 7.13e-47 161
Msa0353030 MtrunA17_Chr1g0203411 54.615 130 57 1 19 146 9 138 1.32e-46 159
Msa0353030 MtrunA17_Chr7g0217741 64.815 108 38 0 19 126 9 116 6.67e-46 158
Msa0353030 MtrunA17_Chr6g0453471 64.220 109 39 0 18 126 8 116 9.11e-46 159
Msa0353030 MtrunA17_Chr4g0042671 65.741 108 37 0 19 126 9 116 1.15e-45 160
Msa0353030 MtrunA17_Chr7g0274581 62.264 106 40 0 22 127 12 117 2.33e-45 154
Msa0353030 MtrunA17_Chr4g0022931 56.061 132 55 1 19 147 10 141 2.37e-45 155
Msa0353030 MtrunA17_Chr8g0349261 61.017 118 45 1 10 126 1 118 2.41e-45 156
Msa0353030 MtrunA17_Chr4g0057031 61.468 109 42 0 18 126 8 116 3.16e-45 155
Msa0353030 MtrunA17_Chr5g0410961 61.905 105 40 0 22 126 12 116 4.51e-45 157
Msa0353030 MtrunA17_Chr3g0110351 61.818 110 42 0 18 127 8 117 6.42e-45 155
Msa0353030 MtrunA17_Chr4g0044421 58.065 124 44 1 3 126 1 116 7.18e-45 152
Msa0353030 MtrunA17_Chr5g0434571 55.556 144 57 4 9 146 36 178 8.86e-45 156
Msa0353030 MtrunA17_Chr4g0070611 58.678 121 46 1 19 135 9 129 1.26e-44 155
Msa0353030 MtrunA17_Chr5g0395281 63.303 109 40 0 18 126 8 116 1.29e-44 155
Msa0353030 MtrunA17_Chr4g0070641 58.197 122 47 1 19 136 9 130 1.61e-44 150
Msa0353030 MtrunA17_Chr1g0167661 57.364 129 55 0 19 147 9 137 2.69e-44 152
Msa0353030 MtrunA17_Chr4g0039971 61.468 109 42 0 18 126 9 117 3.25e-44 155
Msa0353030 MtrunA17_Chr6g0452271 57.798 109 46 0 18 126 8 116 3.42e-44 154
Msa0353030 MtrunA17_Chr4g0068061 61.111 108 42 0 19 126 9 116 7.20e-44 154
Msa0353030 MtrunA17_Chr4g0022901 62.617 107 40 0 19 125 10 116 1.17e-43 151
Msa0353030 MtrunA17_Chr1g0187761 55.556 135 54 1 19 147 9 143 1.37e-43 150
Msa0353030 MtrunA17_Chr7g0275911 59.091 110 45 0 18 127 8 117 2.03e-43 150
Msa0353030 MtrunA17_Chr8g0343831 61.538 104 40 0 24 127 10 113 3.01e-43 149
Msa0353030 MtrunA17_Chr7g0228891 60.909 110 43 0 18 127 8 117 3.14e-43 150
Msa0353030 MtrunA17_Chr8g0346561 53.125 128 59 1 19 146 9 135 4.43e-43 150
Msa0353030 MtrunA17_Chr3g0103281 62.037 108 41 0 19 126 9 116 5.50e-43 151
Msa0353030 MtrunA17_Chr7g0261281 59.664 119 45 1 19 134 9 127 7.88e-43 149
Msa0353030 MtrunA17_Chr3g0121241 59.259 108 44 0 19 126 39 146 9.22e-43 150
Msa0353030 MtrunA17_Chr1g0167691 62.963 108 40 0 19 126 9 116 1.64e-42 148
Msa0353030 MtrunA17_Chr4g0055981 55.085 118 53 0 8 125 41 158 2.16e-42 147
Msa0353030 MtrunA17_Chr4g0022911 48.993 149 72 2 20 166 11 157 3.37e-42 148
Msa0353030 MtrunA17_Chr7g0254411 51.773 141 63 2 19 156 9 147 1.16e-41 148
Msa0353030 MtrunA17_Chr7g0228231 53.982 113 52 0 22 134 14 126 1.79e-41 144
Msa0353030 MtrunA17_Chr1g0151941 49.612 129 55 2 18 136 8 136 2.68e-41 144
Msa0353030 MtrunA17_Chr1g0194951 60.185 108 43 0 19 126 9 116 4.35e-41 147
Msa0353030 MtrunA17_Chr6g0450101 53.448 116 54 0 12 127 4 119 9.68e-41 142
Msa0353030 MtrunA17_Chr2g0311221 61.165 103 40 0 18 120 10 112 1.04e-40 145
Msa0353030 MtrunA17_Chr1g0209661 53.982 113 52 0 15 127 20 132 1.60e-40 144
Msa0353030 MtrunA17_Chr1g0168661 60.000 105 42 0 23 127 22 126 1.75e-40 142
Msa0353030 MtrunA17_Chr7g0217221 55.932 118 49 1 17 131 7 124 5.45e-40 142
Msa0353030 MtrunA17_Chr1g0186061 51.639 122 59 0 17 138 15 136 8.59e-40 140
Msa0353030 MtrunA17_Chr8g0342511 71.605 81 23 0 17 97 7 87 2.92e-39 134
Msa0353030 MtrunA17_Chr4g0060721 38.889 180 100 1 19 198 10 179 4.54e-39 141
Msa0353030 MtrunA17_Chr8g0342531 64.773 88 31 0 12 99 2 89 4.66e-39 136
Msa0353030 MtrunA17_Chr3g0099131 54.630 108 49 0 20 127 39 146 4.72e-39 145
Msa0353030 MtrunA17_Chr3g0092401 55.357 112 50 0 19 130 10 121 7.18e-39 140
Msa0353030 MtrunA17_Chr5g0417821 59.048 105 43 0 22 126 7 111 8.38e-39 139
Msa0353030 MtrunA17_Chr1g0180391 49.618 131 64 1 22 150 19 149 1.01e-38 137
Msa0353030 MtrunA17_Chr1g0194291 57.273 110 47 0 18 127 17 126 1.07e-38 138
Msa0353030 MtrunA17_Chr1g0154031 56.481 108 47 0 22 129 76 183 1.18e-38 142
Msa0353030 MtrunA17_Chr4g0022881 48.092 131 68 0 17 147 7 137 1.23e-38 137
Msa0353030 MtrunA17_Chr6g0453211 58.252 103 43 0 18 120 8 110 1.85e-38 139
Msa0353030 MtrunA17_Chr3g0080861 55.140 107 48 0 22 128 37 143 3.06e-38 142
Msa0353030 MtrunA17_Chr4g0022891 46.154 143 73 1 18 160 8 146 3.19e-38 136
Msa0353030 MtrunA17_Chr5g0400821 55.455 110 48 1 18 126 8 117 3.75e-38 138
Msa0353030 MtrunA17_Chr1g0152011 56.364 110 47 1 18 126 8 117 4.00e-38 139
Msa0353030 MtrunA17_Chr8g0354661 55.769 104 46 0 22 125 37 140 5.33e-38 142
Msa0353030 MtrunA17_Chr4g0028311 55.455 110 48 1 18 126 8 117 6.74e-38 137
Msa0353030 MtrunA17_Chr7g0247131 74.667 75 19 0 54 128 10 84 1.48e-37 135
Msa0353030 MtrunA17_Chr7g0269831 57.851 121 51 0 19 139 9 129 1.94e-37 137
Msa0353030 MtrunA17_Chr3g0135311 53.636 110 50 1 18 126 8 117 2.48e-37 137
Msa0353030 MtrunA17_Chr7g0264641 48.760 121 61 1 18 137 8 128 9.39e-37 133
Msa0353030 MtrunA17_Chr1g0194301 53.774 106 49 0 22 127 33 138 9.87e-37 133
Msa0353030 MtrunA17_Chr4g0030881 50.833 120 52 1 23 135 8 127 1.21e-36 132
Msa0353030 MtrunA17_Chr8g0342461 68.675 83 25 1 18 99 8 90 1.43e-36 129
Msa0353030 MtrunA17_Chr2g0327351 55.769 104 45 1 18 120 8 111 2.34e-36 133
Msa0353030 MtrunA17_Chr8g0342471 68.675 83 25 1 18 99 8 90 2.65e-36 128
Msa0353030 MtrunA17_Chr2g0327821 50.000 118 59 0 19 136 3 120 4.28e-36 130
Msa0353030 MtrunA17_Chr2g0322521 53.636 110 51 0 19 128 26 135 4.99e-36 134
Msa0353030 MtrunA17_Chr5g0434931 48.855 131 61 4 1 126 10 139 2.85e-35 129
Msa0353030 MtrunA17_Chr7g0240821 49.138 116 59 0 27 142 6 121 7.41e-35 127
Msa0353030 MtrunA17_Chr4g0054391 55.340 103 45 1 18 119 8 110 8.64e-35 129
Msa0353030 MtrunA17_Chr6g0487491 42.262 168 85 4 18 173 8 175 8.94e-35 127
Msa0353030 MtrunA17_Chr5g0434911 47.581 124 62 1 6 126 2 125 1.30e-34 127
Msa0353030 MtrunA17_Chr4g0072751 53.846 104 47 1 18 120 8 111 1.65e-34 129
Msa0353030 MtrunA17_Chr2g0293911 55.660 106 47 0 22 127 24 129 3.58e-34 128
Msa0353030 MtrunA17_Chr1g0192411 52.336 107 51 0 21 127 11 117 3.95e-34 129
Msa0353030 MtrunA17_Chr8g0360111 53.333 105 49 0 18 122 21 125 5.99e-34 125
Msa0353030 MtrunA17_Chr4g0068921 54.717 106 48 0 22 127 24 129 1.07e-33 123
Msa0353030 MtrunA17_Chr5g0434831 52.381 105 50 0 22 126 7 111 3.05e-33 121
Msa0353030 MtrunA17_Chr7g0220341 45.455 132 70 1 18 147 21 152 5.15e-33 123
Msa0353030 MtrunA17_Chr5g0440781 48.305 118 57 2 23 139 13 127 6.77e-33 120
Msa0353030 MtrunA17_Chr5g0440761 48.305 118 57 2 23 139 13 127 1.57e-32 122
Msa0353030 MtrunA17_Chr5g0441141 48.305 118 57 2 23 139 13 127 1.85e-32 122
Msa0353030 MtrunA17_Chr4g0042611 60.000 80 32 0 19 98 9 88 4.56e-32 115
Msa0353030 MtrunA17_Chr5g0434841 49.524 105 53 0 22 126 20 124 1.52e-31 120
Msa0353030 MtrunA17_Chr7g0228991 51.887 106 49 2 22 126 29 133 2.17e-31 119
Msa0353030 MtrunA17_Chr5g0395221 64.198 81 29 0 18 98 8 88 7.89e-31 112
Msa0353030 MtrunA17_Chr5g0441131 44.355 124 65 2 23 145 10 130 4.72e-30 113
Msa0353030 MtrunA17_Chr2g0323321 58.889 90 32 1 13 102 7 91 1.57e-29 109
Msa0353030 MtrunA17_Chr8g0334881 50.962 104 50 1 22 124 10 113 1.74e-29 115
Msa0353030 MtrunA17_Chr4g0013361 49.573 117 56 3 22 137 10 124 2.41e-29 114
Msa0353030 MtrunA17_Chr4g0053431 41.566 166 76 4 24 169 5 169 2.93e-29 113
Msa0353030 MtrunA17_Chr4g0008551 54.902 102 45 1 24 125 38 138 4.64e-29 114
Msa0353030 MtrunA17_Chr3g0099141 49.425 87 44 0 18 104 36 122 3.54e-28 107
Msa0353030 MtrunA17_Chr5g0429661 41.880 117 67 1 9 125 107 222 3.56e-28 112
Msa0353030 MtrunA17_Chr5g0401731 37.500 200 91 6 13 180 2 199 3.59e-28 111
Msa0353030 MtrunA17_Chr6g0454921 49.524 105 52 1 24 128 15 118 8.71e-28 107
Msa0353030 MtrunA17_Chr3g0133601 53.636 110 50 1 16 125 29 137 1.80e-27 107
Msa0353030 MtrunA17_Chr2g0294811 57.500 80 34 0 19 98 9 88 2.41e-27 103
Msa0353030 MtrunA17_Chr3g0117511 30.147 272 168 8 4 272 170 422 2.76e-26 108
Msa0353030 MtrunA17_Chr7g0238631 50.000 106 52 1 21 126 110 214 6.31e-26 108
Msa0353030 MtrunA17_Chr5g0417621 42.149 121 69 1 11 131 121 240 2.05e-25 105
Msa0353030 MtrunA17_Chr5g0437321 51.515 99 47 1 24 122 19 116 2.72e-25 103
Msa0353030 MtrunA17_Chr3g0139671 49.057 106 53 1 21 126 82 186 3.27e-25 106
Msa0353030 MtrunA17_Chr5g0434901 60.294 68 27 0 56 123 7 74 1.19e-24 96.7
Msa0353030 MtrunA17_Chr7g0229131 39.456 147 77 4 54 197 4 141 1.74e-24 98.2
Msa0353030 MtrunA17_Chr7g0229101 60.000 70 28 0 54 123 4 73 2.24e-24 99.0
Msa0353030 MtrunA17_Chr4g0058991 43.925 107 59 1 19 125 204 309 3.56e-24 102
Msa0353030 MtrunA17_Chr6g0480581 47.525 101 52 1 24 124 4 103 5.03e-24 98.6
Msa0353030 MtrunA17_Chr4g0042501 40.336 119 70 1 9 127 90 207 5.51e-23 99.0
Msa0353030 MtrunA17_Chr1g0157731 45.283 106 57 1 21 126 88 192 5.87e-23 100
Msa0353030 MtrunA17_Chr6g0460661 40.541 111 63 2 16 125 8 116 1.13e-22 92.8
Msa0353030 MtrunA17_Chr5g0425591 50.000 82 40 1 23 103 10 91 1.66e-22 90.1
Msa0353030 MtrunA17_Chr6g0460671 41.739 115 65 2 12 125 86 199 4.40e-22 95.5
Msa0353030 MtrunA17_Chr7g0228531 44.037 109 58 3 24 132 220 325 5.13e-22 96.3
Msa0353030 MtrunA17_Chr6g0453751 47.253 91 39 2 22 103 20 110 7.73e-22 89.7
Msa0353030 MtrunA17_Chr5g0397841 46.939 98 51 1 22 119 108 204 9.52e-22 95.9
Msa0353030 MtrunA17_Chr1g0177901 36.296 135 84 2 35 169 5 137 1.62e-21 91.3
Msa0353030 MtrunA17_Chr7g0228401 46.154 104 49 3 35 138 290 386 4.79e-21 94.0
Msa0353030 MtrunA17_Chr3g0093811 49.398 83 39 1 47 126 4 86 9.48e-21 90.1
Msa0353030 MtrunA17_Chr3g0125801 44.762 105 55 2 24 127 16 118 3.15e-19 86.7
Msa0353030 MtrunA17_Chr7g0228481 40.708 113 63 3 24 134 220 330 8.63e-19 86.7
Msa0353030 MtrunA17_Chr7g0254261 42.727 110 61 2 17 125 81 189 4.79e-18 84.0
Msa0353030 MtrunA17_Chr7g0233061 37.692 130 65 5 5 129 167 285 7.20e-18 83.6
Msa0353030 MtrunA17_Chr5g0416341 36.296 135 78 3 27 154 29 162 1.08e-17 83.6
Msa0353030 MtrunA17_Chr7g0238651 38.298 94 56 1 27 118 10 103 4.05e-16 78.6
Msa0353030 MtrunA17_Chr1g0193901 51.515 66 30 2 14 78 4 68 9.35e-16 72.4
Msa0353030 MtrunA17_Chr1g0193891 51.515 66 30 2 14 78 4 68 9.35e-16 72.4
Msa0353030 MtrunA17_Chr1g0193871 51.515 66 30 2 14 78 4 68 9.35e-16 72.4
Msa0353030 MtrunA17_Chr1g0193881 51.515 66 30 2 14 78 4 68 9.35e-16 72.4
Msa0353030 MtrunA17_Chr8g0362231 37.624 101 62 1 27 127 25 124 2.08e-15 76.6
Msa0353030 MtrunA17_Chr5g0434871 58.140 43 18 0 84 126 2 44 6.80e-13 63.2
Msa0353030 MtrunA17_Chr3g0104491 39.474 76 41 2 64 135 2 76 3.38e-12 66.2
Msa0353030 MtrunA17_Chr2g0322831 58.537 41 17 0 80 120 34 74 8.22e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0353030 AT3G08500.1 45.179 363 154 9 1 339 1 342 1.05e-80 249
Msa0353030 AT5G12870.1 78.400 125 25 1 3 127 1 123 1.37e-69 219
Msa0353030 AT4G01680.3 77.982 109 24 0 19 127 9 117 2.57e-59 191
Msa0353030 AT4G01680.1 77.982 109 24 0 19 127 9 117 1.33e-58 192
Msa0353030 AT5G26660.1 53.226 186 71 2 19 204 9 178 1.65e-58 192
Msa0353030 AT1G09540.1 76.147 109 26 0 19 127 9 117 4.65e-58 192
Msa0353030 AT3G13890.2 74.312 109 28 0 18 126 8 116 4.73e-58 191
Msa0353030 AT1G57560.2 75.000 108 27 0 19 126 9 116 4.26e-57 186
Msa0353030 AT1G57560.1 75.000 108 27 0 19 126 9 116 4.31e-57 188
Msa0353030 AT1G63910.1 68.182 110 35 0 18 127 8 117 2.27e-55 185
Msa0353030 AT3G13890.1 68.644 118 28 1 18 126 8 125 4.21e-55 184
Msa0353030 AT4G01680.2 70.248 121 24 1 19 127 9 129 5.07e-55 183
Msa0353030 AT3G12720.1 68.519 108 34 0 19 126 19 126 3.78e-52 175
Msa0353030 AT4G05100.1 64.103 117 42 0 10 126 1 117 6.84e-50 169
Msa0353030 AT4G21440.1 67.593 108 35 0 19 126 9 116 2.11e-48 166
Msa0353030 AT2G16720.1 66.667 108 36 0 19 126 9 116 2.22e-48 164
Msa0353030 AT3G48920.1 45.263 190 92 2 18 195 14 203 6.15e-48 162
Msa0353030 AT5G54230.1 67.619 105 34 0 22 126 12 116 8.62e-48 164
Msa0353030 AT4G38620.1 44.086 186 90 4 19 203 9 181 9.11e-48 162
Msa0353030 AT4G34990.1 59.350 123 49 1 24 145 14 136 1.26e-47 162
Msa0353030 AT1G22640.1 51.389 144 66 1 19 162 9 148 1.49e-47 161
Msa0353030 AT5G10280.1 65.421 107 37 0 20 126 10 116 7.35e-47 162
Msa0353030 AT3G01140.2 64.220 109 39 0 18 126 8 116 8.81e-47 162
Msa0353030 AT4G28110.1 63.303 109 40 0 18 126 8 116 1.24e-46 160
Msa0353030 AT5G15310.4 52.703 148 65 2 18 164 8 151 1.85e-46 158
Msa0353030 AT4G12350.1 57.812 128 53 1 18 144 8 135 2.72e-46 159
Msa0353030 AT3G01140.1 64.220 109 39 0 18 126 51 159 3.13e-46 161
Msa0353030 AT5G65230.1 62.385 109 41 0 18 126 8 116 3.17e-46 159
Msa0353030 AT4G09460.1 62.037 108 41 0 19 126 9 116 3.24e-46 157
Msa0353030 AT5G52600.1 55.385 130 57 1 19 147 9 138 3.49e-46 156
Msa0353030 AT5G15310.1 52.703 148 65 2 18 164 8 151 3.78e-46 160
Msa0353030 AT5G14750.1 47.126 174 75 4 3 165 1 168 3.95e-46 156
Msa0353030 AT5G60890.1 61.321 106 41 0 22 127 12 117 3.99e-46 159
Msa0353030 AT5G15310.2 52.703 148 65 2 18 164 8 151 4.63e-46 159
Msa0353030 AT3G61250.1 64.220 109 39 0 18 126 8 116 5.08e-46 159
Msa0353030 AT2G31180.1 62.281 114 43 0 19 132 9 122 6.03e-46 157
Msa0353030 AT5G56110.1 63.889 108 39 0 19 126 9 116 2.21e-45 157
Msa0353030 AT1G74430.1 65.714 105 36 0 22 126 12 116 2.42e-45 156
Msa0353030 AT3G02940.2 59.633 109 44 0 18 126 8 116 3.03e-45 157
Msa0353030 AT5G40330.1 40.191 209 114 4 23 222 13 219 3.48e-45 154
Msa0353030 AT4G25560.1 67.961 103 33 0 23 125 11 113 4.38e-45 155
Msa0353030 AT1G34670.1 64.762 105 37 0 22 126 12 116 5.81e-45 157
Msa0353030 AT3G02940.1 59.633 109 44 0 18 126 8 116 7.12e-45 156
Msa0353030 AT3G02940.3 59.633 109 44 0 18 126 8 116 7.12e-45 156
Msa0353030 AT5G52260.1 59.375 128 45 1 19 139 9 136 1.32e-44 154
Msa0353030 AT3G23250.1 45.402 174 92 2 19 192 9 179 1.33e-44 154
Msa0353030 AT5G35550.1 46.369 179 92 2 10 187 1 176 1.89e-44 153
Msa0353030 AT1G56160.1 46.243 173 85 1 17 189 9 173 3.76e-44 154
Msa0353030 AT1G66230.1 60.909 110 43 0 18 127 8 117 6.40e-44 152
Msa0353030 AT4G22680.1 53.571 140 62 2 18 156 8 145 7.78e-44 152
Msa0353030 AT5G16770.4 60.952 105 41 0 22 126 12 116 1.48e-43 153
Msa0353030 AT5G16770.3 60.952 105 41 0 22 126 12 116 1.48e-43 153
Msa0353030 AT1G35515.1 57.407 108 46 0 19 126 9 116 2.15e-43 149
Msa0353030 AT1G06180.1 63.889 108 39 0 19 126 9 116 2.21e-43 150
Msa0353030 AT2G47460.1 61.111 108 42 0 19 126 9 116 2.79e-43 153
Msa0353030 AT5G61420.2 61.905 105 40 0 22 126 12 116 2.96e-43 153
Msa0353030 AT5G16770.1 60.952 105 41 0 22 126 12 116 3.21e-43 152
Msa0353030 AT5G16770.2 60.952 105 41 0 22 126 12 116 3.21e-43 152
Msa0353030 AT5G07700.1 61.905 105 40 0 22 126 12 116 3.33e-43 152
Msa0353030 AT5G07700.2 61.905 105 40 0 22 126 12 116 3.33e-43 152
Msa0353030 AT5G16600.1 60.000 110 44 0 18 127 8 117 5.56e-43 151
Msa0353030 AT1G79180.1 46.914 162 83 2 18 176 10 171 6.11e-43 150
Msa0353030 AT1G18570.1 61.905 105 40 0 22 126 13 117 8.43e-43 152
Msa0353030 AT5G07690.1 61.905 105 40 0 22 126 12 116 1.05e-42 151
Msa0353030 AT1G16490.1 57.018 114 49 0 18 131 10 123 2.27e-42 148
Msa0353030 AT5G49330.1 61.111 108 42 0 19 126 9 116 2.43e-42 150
Msa0353030 AT3G62610.1 59.259 108 44 0 19 126 9 116 2.48e-42 150
Msa0353030 AT3G27920.1 51.220 123 60 0 21 143 13 135 3.20e-42 146
Msa0353030 AT3G27810.1 49.206 126 64 0 19 144 17 142 5.15e-42 146
Msa0353030 AT3G13540.1 46.575 146 77 1 18 162 19 164 6.19e-42 146
Msa0353030 AT4G17785.2 59.048 105 43 0 22 126 13 117 1.67e-41 148
Msa0353030 AT5G62320.1 41.848 184 95 3 10 185 1 180 1.71e-41 145
Msa0353030 AT4G17785.1 59.048 105 43 0 22 126 13 117 1.89e-41 148
Msa0353030 AT5G14340.1 51.007 149 70 2 18 165 20 166 2.19e-41 145
Msa0353030 AT3G01530.1 54.054 111 51 0 22 132 25 135 3.53e-41 143
Msa0353030 AT3G28470.1 62.136 103 39 0 18 120 8 110 3.55e-41 146
Msa0353030 AT1G68320.1 41.143 175 88 2 21 195 18 177 6.20e-41 145
Msa0353030 AT5G40350.1 49.180 122 62 0 20 141 15 136 6.30e-41 142
Msa0353030 AT4G13480.1 56.757 111 48 0 23 133 7 117 8.77e-41 144
Msa0353030 AT3G24310.1 56.034 116 51 0 23 138 19 134 9.01e-41 144
Msa0353030 AT3G30210.1 58.333 108 45 0 23 130 28 135 1.03e-40 144
Msa0353030 AT3G12820.1 58.716 109 45 0 18 126 10 118 1.22e-40 143
Msa0353030 AT3G47600.1 51.128 133 64 1 18 149 8 140 2.41e-40 144
Msa0353030 AT1G08810.1 56.881 109 47 0 18 126 8 116 3.97e-40 142
Msa0353030 AT2G26960.1 54.386 114 52 0 11 124 9 122 4.16e-40 146
Msa0353030 AT1G74080.1 60.000 105 42 0 22 126 12 116 4.56e-40 144
Msa0353030 AT1G18710.1 58.095 105 44 0 22 126 12 116 5.74e-40 142
Msa0353030 AT5G26660.2 50.000 156 62 2 49 204 8 147 6.53e-40 143
Msa0353030 AT5G55020.1 57.547 106 45 0 22 127 26 131 1.29e-39 146
Msa0353030 AT4G26930.1 57.282 103 44 0 22 124 19 121 2.00e-39 144
Msa0353030 AT1G74650.1 57.407 108 46 0 19 126 9 116 2.53e-39 142
Msa0353030 AT3G28910.1 54.310 116 53 0 18 133 8 123 2.79e-39 141
Msa0353030 AT2G32460.1 54.206 107 49 0 22 128 18 124 2.87e-39 145
Msa0353030 AT2G32460.2 54.206 107 49 0 22 128 6 112 3.22e-39 145
Msa0353030 AT5G62470.2 54.386 114 52 0 19 132 9 122 5.88e-39 141
Msa0353030 AT2G47190.1 36.179 246 130 6 20 254 18 247 7.18e-39 139
Msa0353030 AT3G11440.2 49.593 123 62 0 6 128 25 147 7.48e-39 144
Msa0353030 AT3G49690.1 56.364 110 47 1 18 126 8 117 1.27e-38 139
Msa0353030 AT1G48000.1 57.009 107 46 0 21 127 31 137 1.49e-38 137
Msa0353030 AT5G06100.1 55.140 107 48 0 22 128 32 138 1.82e-38 142
Msa0353030 AT3G11440.3 49.593 123 62 0 6 128 25 147 3.12e-38 143
Msa0353030 AT3G11440.4 49.593 123 62 0 6 128 25 147 3.12e-38 143
Msa0353030 AT3G11440.1 49.593 123 62 0 6 128 25 147 3.12e-38 143
Msa0353030 AT5G06100.5 55.140 107 48 0 22 128 32 138 4.86e-38 142
Msa0353030 AT5G06100.2 55.140 107 48 0 22 128 32 138 4.86e-38 142
Msa0353030 AT5G06100.3 55.140 107 48 0 22 128 32 138 4.86e-38 142
Msa0353030 AT5G06100.4 55.140 107 48 0 22 128 32 138 4.86e-38 142
Msa0353030 AT5G23000.1 55.455 110 48 1 18 126 8 117 8.34e-38 138
Msa0353030 AT5G65790.1 55.455 110 48 1 18 126 8 117 8.94e-38 139
Msa0353030 AT1G25340.1 50.820 122 60 0 12 133 8 129 1.26e-37 136
Msa0353030 AT5G57620.1 55.455 110 48 1 18 126 8 117 1.31e-37 137
Msa0353030 AT1G79180.2 43.713 167 59 2 18 149 10 176 2.32e-37 137
Msa0353030 AT5G62470.1 54.386 114 51 1 19 132 9 121 3.71e-37 137
Msa0353030 AT3G06490.1 55.172 116 52 0 12 127 9 124 3.04e-36 134
Msa0353030 AT4G37780.1 37.264 212 118 4 18 218 8 215 4.44e-36 132
Msa0353030 AT3G53200.1 53.211 109 51 0 22 130 9 117 1.33e-35 129
Msa0353030 AT5G59780.3 48.305 118 61 0 19 136 5 122 1.39e-35 129
Msa0353030 AT2G36890.1 52.727 110 51 1 18 126 8 117 1.40e-35 131
Msa0353030 AT3G46130.1 50.877 114 56 0 23 136 10 123 1.86e-35 130
Msa0353030 AT2G36890.2 48.819 127 63 2 1 126 33 158 2.48e-35 131
Msa0353030 AT5G35550.2 42.458 179 92 2 9 187 12 179 4.83e-34 126
Msa0353030 AT1G66370.1 47.015 134 61 2 22 148 8 138 2.78e-33 124
Msa0353030 AT5G49620.1 53.774 106 49 0 22 127 26 131 6.98e-33 124
Msa0353030 AT1G25340.2 48.361 122 58 1 12 133 8 124 7.93e-33 123
Msa0353030 AT1G25340.3 48.361 122 58 1 12 133 8 124 1.70e-32 123
Msa0353030 AT5G14750.3 50.420 119 46 3 58 165 18 134 4.15e-32 118
Msa0353030 AT3G47600.2 49.573 117 54 2 34 149 22 134 2.90e-31 120
Msa0353030 AT2G26950.1 47.706 109 56 1 19 127 13 120 3.03e-31 121
Msa0353030 AT1G66380.1 54.808 104 47 0 22 125 8 111 6.15e-31 114
Msa0353030 AT3G27810.2 53.333 90 42 0 55 144 4 93 2.18e-30 114
Msa0353030 AT3G12820.2 72.464 69 19 0 58 126 2 70 2.20e-30 114
Msa0353030 AT1G56650.1 49.180 122 56 1 22 137 8 129 3.21e-30 115
Msa0353030 AT3G60460.1 48.696 115 58 1 18 131 7 121 5.00e-30 116
Msa0353030 AT1G66390.1 56.190 105 44 2 22 125 8 111 2.00e-29 113
Msa0353030 AT5G40350.2 52.809 89 42 0 53 141 3 91 2.76e-29 110
Msa0353030 AT5G49620.2 47.500 120 49 1 22 127 26 145 2.87e-29 115
Msa0353030 AT3G46130.3 55.422 83 37 0 54 136 9 91 5.82e-29 112
Msa0353030 AT5G59780.2 56.098 82 36 0 55 136 20 101 1.01e-28 110
Msa0353030 AT3G46130.4 56.098 82 36 0 55 136 20 101 1.35e-28 111
Msa0353030 AT5G40360.1 45.833 120 62 3 7 126 142 258 2.21e-28 113
Msa0353030 AT3G53200.2 59.211 76 31 0 55 130 9 84 2.79e-27 106
Msa0353030 AT2G39880.1 52.212 113 52 2 13 125 40 150 4.20e-27 110
Msa0353030 AT4G18770.1 44.628 121 65 2 19 138 212 331 4.28e-27 110
Msa0353030 AT3G27785.1 47.222 108 54 2 19 125 184 289 1.87e-26 109
Msa0353030 AT5G67300.1 50.000 102 50 1 24 125 6 106 2.42e-26 106
Msa0353030 AT3G55730.1 44.595 148 77 3 19 166 52 194 1.18e-25 106
Msa0353030 AT4G37260.1 51.961 102 48 1 24 125 13 113 2.73e-25 104
Msa0353030 AT5G58850.1 39.200 125 75 1 22 146 103 226 3.64e-25 105
Msa0353030 AT3G50060.1 44.715 123 66 2 24 146 6 126 4.19e-25 103
Msa0353030 AT3G09230.1 52.427 103 48 1 24 126 55 156 4.49e-25 104
Msa0353030 AT5G11050.1 40.164 122 71 2 24 144 105 225 6.71e-25 104
Msa0353030 AT5G02320.3 46.729 107 56 1 21 127 64 169 1.53e-24 104
Msa0353030 AT5G02320.1 46.729 107 56 1 21 127 124 229 1.58e-24 104
Msa0353030 AT5G02320.2 46.729 107 56 1 21 127 124 229 1.58e-24 104
Msa0353030 AT1G69560.1 39.516 124 72 2 5 127 88 209 3.67e-24 101
Msa0353030 AT1G69560.2 39.516 124 72 2 5 127 104 225 4.52e-24 101
Msa0353030 AT3G09370.2 49.038 104 52 1 22 125 133 235 4.53e-24 103
Msa0353030 AT3G09370.1 49.038 104 52 1 22 125 128 230 4.60e-24 103
Msa0353030 AT3G09370.3 49.038 104 52 1 22 125 141 243 6.31e-24 102
Msa0353030 AT5G11510.3 47.170 106 55 1 21 126 78 182 1.03e-23 102
Msa0353030 AT5G11510.1 47.170 106 55 1 21 126 78 182 1.03e-23 102
Msa0353030 AT5G11510.4 47.170 106 55 1 21 126 78 182 1.03e-23 102
Msa0353030 AT5G11510.5 47.170 106 55 1 21 126 78 182 1.22e-23 102
Msa0353030 AT5G11510.2 47.170 106 55 1 21 126 78 182 1.27e-23 102
Msa0353030 AT2G25230.1 40.496 121 69 2 17 137 19 136 1.29e-23 97.8
Msa0353030 AT1G22640.3 69.492 59 18 0 68 126 1 59 1.86e-23 96.3
Msa0353030 AT3G23250.2 43.200 125 68 2 68 192 1 122 2.20e-23 97.1
Msa0353030 AT2G23290.1 49.020 102 51 1 24 125 13 113 4.76e-23 97.8
Msa0353030 AT1G66380.3 61.111 72 28 0 54 125 7 78 6.13e-23 92.0
Msa0353030 AT1G17950.1 47.059 102 53 1 24 125 5 105 9.55e-23 95.9
Msa0353030 AT5G14750.4 45.872 109 46 3 68 165 1 107 1.10e-22 92.8
Msa0353030 AT5G14750.2 45.872 109 46 3 68 165 1 107 1.10e-22 92.8
Msa0353030 AT1G26780.2 43.925 107 57 2 22 127 96 200 4.23e-22 95.9
Msa0353030 AT1G26780.1 43.925 107 57 2 22 127 96 200 4.86e-22 94.4
Msa0353030 AT4G33450.1 36.090 133 84 1 7 139 2 133 1.92e-21 92.0
Msa0353030 AT4G32730.1 43.396 106 59 1 21 126 84 188 2.55e-21 95.5
Msa0353030 AT4G32730.5 43.396 106 59 1 21 126 84 188 2.73e-21 95.5
Msa0353030 AT4G32730.4 43.396 106 59 1 21 126 84 188 2.73e-21 95.5
Msa0353030 AT4G32730.3 43.396 106 59 1 21 126 84 188 2.73e-21 95.5
Msa0353030 AT4G32730.2 43.396 106 59 1 21 126 84 188 2.73e-21 95.5
Msa0353030 AT5G17800.1 35.036 137 87 2 12 147 81 216 2.59e-20 90.5
Msa0353030 AT1G73410.1 46.154 104 55 1 24 127 6 108 3.43e-20 88.6
Msa0353030 AT2G02820.3 41.584 101 58 1 27 127 33 132 3.74e-20 90.1
Msa0353030 AT2G02820.1 41.584 101 58 1 27 127 33 132 4.12e-20 91.3
Msa0353030 AT1G71030.2 56.061 66 29 0 61 126 5 70 5.18e-20 86.7
Msa0353030 AT2G02820.2 41.584 101 58 1 27 127 33 132 6.12e-20 90.9
Msa0353030 AT1G71030.1 56.061 66 29 0 61 126 19 84 7.32e-20 86.7
Msa0353030 AT1G73410.2 46.154 104 55 1 24 127 6 108 9.16e-20 86.7
Msa0353030 AT3G29020.1 33.846 130 85 1 24 153 65 193 9.66e-20 87.0
Msa0353030 AT3G29020.2 33.846 130 85 1 24 153 67 195 1.68e-19 87.8
Msa0353030 AT1G18960.1 42.857 105 53 4 24 126 10 109 2.31e-19 87.4
Msa0353030 AT5G40430.1 36.937 111 67 3 17 127 47 154 3.12e-19 86.3
Msa0353030 AT4G00540.2 41.284 109 60 2 22 127 101 208 1.51e-18 86.3
Msa0353030 AT4G00540.1 41.284 109 60 2 22 127 99 206 2.50e-18 85.9
Msa0353030 AT1G66380.2 50.633 79 39 0 22 100 8 86 5.11e-18 79.0
Msa0353030 AT1G14350.2 40.594 101 59 1 27 127 28 127 1.17e-17 84.0
Msa0353030 AT1G14350.1 40.594 101 59 1 27 127 28 127 1.17e-17 84.0
Msa0353030 AT2G37630.1 31.783 129 85 2 27 152 7 135 9.30e-15 74.7
Msa0353030 AT5G39700.1 33.884 121 79 1 19 139 51 170 9.55e-15 72.0
Msa0353030 AT4G25560.2 71.111 45 13 0 81 125 3 47 2.06e-14 72.0
Msa0353030 AT5G59780.1 47.368 57 30 0 80 136 1 57 4.69e-14 69.7
Msa0353030 AT3G46130.2 48.214 56 29 0 81 136 2 57 8.95e-14 69.3
Msa0353030 AT1G14350.3 46.774 62 33 0 66 127 23 84 8.50e-13 69.3
Msa0353030 AT1G14350.4 46.774 62 33 0 66 127 23 84 8.50e-13 69.3
Msa0353030 AT3G28910.2 55.319 47 21 0 87 133 1 47 2.01e-11 63.9
Msa0353030 AT1G74650.3 62.500 40 15 0 87 126 1 40 2.83e-11 63.5

Find 141 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACATTATGATCACCAATT+AGG 0.152899 3_1:-22584919 None:intergenic
ACTTGTCTTTGTTTATATTT+TGG 0.168716 3_1:-22585773 None:intergenic
ACTTGTGTTAAACAACTATT+TGG 0.180604 3_1:-22584758 None:intergenic
ATTAGTTCTTGTTCATTAAT+TGG 0.192848 3_1:-22584584 None:intergenic
TGATGATCATTATGGGATTT+TGG 0.196511 3_1:+22584814 Msa0353030:CDS
TAGAAAGTCTAAGAGAAAAT+TGG 0.237860 3_1:-22585610 None:intergenic
ACATTTGTGTATATGCAAAT+TGG 0.244524 3_1:-22585675 None:intergenic
ATTCATTTCCACTCCATTCT+TGG 0.254594 3_1:+22582777 Msa0353030:CDS
GGCAATATGGTTGATGATAT+TGG 0.254643 3_1:+22584782 Msa0353030:CDS
CACATTATGATCACCAATTA+GGG 0.256108 3_1:-22584918 None:intergenic
CTTCATAGTGATGATCATTA+TGG 0.268893 3_1:+22584806 Msa0353030:CDS
CCTCTGATCTCTCTCTAAAT+TGG 0.292372 3_1:+22585168 Msa0353030:three_prime_UTR
TAAAATACCTTATGGAATCT+TGG 0.317280 3_1:+22585721 Msa0353030:three_prime_UTR
TAGATTAATCTAATGGCTAT+AGG 0.317469 3_1:+22585408 Msa0353030:three_prime_UTR
ATTTCTCTGTTTGAATTTAA+CGG 0.322359 3_1:+22585252 Msa0353030:three_prime_UTR
GCAATATGGTTGATGATATT+GGG 0.322671 3_1:+22584783 Msa0353030:CDS
GAAATCAAGAGGAGGAAAAT+AGG 0.323976 3_1:-22585095 None:intergenic
TATTATTGAAGTGGTTGTTA+TGG 0.328348 3_1:-22584946 None:intergenic
AACTCCAATGAGGACATGTT+TGG 0.328489 3_1:+22584998 Msa0353030:CDS
TTGTTAGACAACAAGGAAAA+TGG 0.336500 3_1:-22584698 None:intergenic
CAGGTAGACGTGCTGCAATT+TGG 0.342428 3_1:-22584406 None:intergenic
AGGTAGACGTGCTGCAATTT+GGG 0.345262 3_1:-22584405 None:intergenic
TTTAACACAAGTTGGCAATA+TGG 0.356129 3_1:+22584769 Msa0353030:CDS
TATCTACCACAACATACAAT+TGG 0.357750 3_1:-22585867 None:intergenic
TCCACTCCATTCTTGGCAAC+AGG 0.366668 3_1:+22582784 Msa0353030:CDS
TTTCTCCTTGAATATCTTTG+TGG 0.371969 3_1:+22585334 Msa0353030:three_prime_UTR
TGGAGTAGAGTTGTTGTTGT+TGG 0.373139 3_1:-22584489 None:intergenic
AAGAATGGGAGAATGGGATT+TGG 0.378844 3_1:+22585051 Msa0353030:CDS
GAAGATAAGAGTGCCCTAAT+TGG 0.381814 3_1:+22584905 Msa0353030:CDS
CTACAGCCGGCTGCACCTTA+AGG 0.383201 3_1:-22585206 None:intergenic
AATGAGGACATGTTTGGGTT+TGG 0.385323 3_1:+22585004 Msa0353030:CDS
AAAATTCTTTATTTCATTGT+CGG 0.387116 3_1:-22584435 None:intergenic
CAGAGGGGACAAGGGGTGAT+TGG 0.388262 3_1:-22585151 None:intergenic
TGCATTCTTTGTGCCCTTGT+GGG 0.388916 3_1:+22585954 Msa0353030:three_prime_UTR
GTGAAGATTAAGAGAAATCA+AGG 0.400765 3_1:-22585579 None:intergenic
GATCTTTGAGAAAGCTATAT+AGG 0.402970 3_1:-22582378 None:intergenic
ACTCCAATGAGGACATGTTT+GGG 0.406163 3_1:+22584999 Msa0353030:CDS
ACAAGGAAAATGGATCAAAT+TGG 0.406250 3_1:-22584688 None:intergenic
AAAATACCTTATGGAATCTT+GGG 0.410847 3_1:+22585722 Msa0353030:three_prime_UTR
TTCATAGTGATGATCATTAT+GGG 0.411437 3_1:+22584807 Msa0353030:CDS
TCCGAAGTGTCACTGTTGTT+TGG 0.430031 3_1:-22584515 None:intergenic
AAAACTTAAGAATGGGAGAA+TGG 0.437647 3_1:+22585044 Msa0353030:CDS
AATTTAACGGTACGTACAAC+CGG 0.438874 3_1:+22585265 Msa0353030:three_prime_UTR
CAAAGATATTCAAGGAGAAA+AGG 0.439458 3_1:-22585331 None:intergenic
TAACTAAAGGACAAGGTTGT+TGG 0.440286 3_1:+22582631 Msa0353030:CDS
TCTTATGAAGAAGCACTTTG+AGG 0.443236 3_1:-22582436 None:intergenic
ATGTTTGGGTTTGGAAGTCA+TGG 0.448037 3_1:+22585013 Msa0353030:CDS
GCAAGCTAAGGAAAGGGTTA+TGG 0.448835 3_1:+22582571 Msa0353030:CDS
AATGTACCTGTTGCCAAGAA+TGG 0.449357 3_1:-22582790 None:intergenic
AAACCCAAACATGTCCTCAT+TGG 0.453573 3_1:-22585002 None:intergenic
AAACTTAAGAATGGGAGAAT+GGG 0.456783 3_1:+22585045 Msa0353030:CDS
GAACTAAAGACAAGAAAGAA+TGG 0.462003 3_1:-22585748 None:intergenic
CTCTCTCTCTAATGCAAATG+AGG 0.464940 3_1:+22582502 Msa0353030:exon
GAGGAAACCTGATTTGATCA+TGG 0.466267 3_1:+22582521 Msa0353030:CDS
AATAGTTGTTTAACACAAGT+TGG 0.469190 3_1:+22584761 Msa0353030:CDS
GTGTATACATAGTCTTGCTT+CGG 0.472005 3_1:+22585924 Msa0353030:three_prime_UTR
GTAAAAGTTGCCGTCTTCGT+TGG 0.474947 3_1:+22582691 Msa0353030:CDS
ACCAACTTCTCATCTTCCTC+AGG 0.478429 3_1:-22582597 None:intergenic
ATGCTAATTCTACTTTCTAG+TGG 0.482535 3_1:-22584881 None:intergenic
GAGAGAGATCAGAGGGGACA+AGG 0.483920 3_1:-22585160 None:intergenic
GAAAATGGATCAAATTGGTC+AGG 0.485864 3_1:-22584683 None:intergenic
AAGGTGACTAAAATACCTTA+TGG 0.487741 3_1:+22585713 Msa0353030:three_prime_UTR
GATTTCCACAAAGATATTCA+AGG 0.489134 3_1:-22585339 None:intergenic
ATACTCTACAACGAACCTTA+AGG 0.489425 3_1:+22585191 Msa0353030:three_prime_UTR
AATGGGAGAATGGGATTTGG+AGG 0.489531 3_1:+22585054 Msa0353030:CDS
TTCAAATGAAATGTGAATAG+TGG 0.489585 3_1:+22586048 Msa0353030:three_prime_UTR
AGAGATAGAAAGACTTTGAA+AGG 0.490896 3_1:-22585521 None:intergenic
ATCTACCACAACATACAATT+GGG 0.496280 3_1:-22585866 None:intergenic
TGAAGCAACTATTATTGAAG+TGG 0.497587 3_1:-22584955 None:intergenic
ACATATATGTATGAAACAAA+AGG 0.497809 3_1:-22585796 None:intergenic
AATGCGCCGCGCTTAAGATC+AGG 0.500512 3_1:-22582729 None:intergenic
CAAATTGCAGCACGTCTACC+TGG 0.503672 3_1:+22584407 Msa0353030:CDS
CAAAAGAGGCAAATAAATGT+AGG 0.507043 3_1:+22586085 Msa0353030:three_prime_UTR
GCAAGGAGAAAACTTAAGAA+TGG 0.509485 3_1:+22585036 Msa0353030:CDS
TTGCATTCTTTGTGCCCTTG+TGG 0.514381 3_1:+22585953 Msa0353030:three_prime_UTR
TCCAAGTCAATGTCTTCTCA+TGG 0.517738 3_1:+22585639 Msa0353030:three_prime_UTR
CAATTTAGAGAGAGATCAGA+GGG 0.520054 3_1:-22585167 None:intergenic
AGAGAGATCAGAGGGGACAA+GGG 0.521321 3_1:-22585159 None:intergenic
AGGAAACCTGATTTGATCAT+GGG 0.522620 3_1:+22582522 Msa0353030:CDS
AGTGACATTGCTAGGAATGC+TGG 0.522915 3_1:+22582654 Msa0353030:CDS
AACTAAAGACAAGAAAGAAT+GGG 0.525033 3_1:-22585747 None:intergenic
CTTTGAAAGGATTGTCATAG+AGG 0.528220 3_1:-22585508 None:intergenic
CAAGGAGAAAACTTAAGAAT+GGG 0.528613 3_1:+22585037 Msa0353030:CDS
ATGAGAAGACATTGACTTGG+AGG 0.530705 3_1:-22585637 None:intergenic
CAGGTATAGTTGTCTACAGC+CGG 0.536191 3_1:-22585219 None:intergenic
AACAAGAGCAAGCTAAGGAA+AGG 0.537747 3_1:+22582564 Msa0353030:CDS
GTGTCACTGTTGTTTGGAGA+TGG 0.538069 3_1:-22584509 None:intergenic
GTTGTTGGAGTGACATTGCT+AGG 0.540759 3_1:+22582646 Msa0353030:CDS
GTAAGATACATGATAACTAA+AGG 0.545634 3_1:+22582618 Msa0353030:CDS
CTAGGAATGCTGGTCTTCAA+AGG 0.546339 3_1:+22582664 Msa0353030:CDS
ACCTGAGGAAGATGAGAAGT+TGG 0.546873 3_1:+22582596 Msa0353030:CDS
TACAACCCAATTGTATGTTG+TGG 0.547350 3_1:+22585861 Msa0353030:three_prime_UTR
GAAAACTTGTCATGTCATAA+CGG 0.554873 3_1:-22584721 None:intergenic
AATGAAAAGACAATTAAACT+TGG 0.554955 3_1:-22585117 None:intergenic
ACAAGAGCAAGCTAAGGAAA+GGG 0.557354 3_1:+22582565 Msa0353030:CDS
ATTACACAAAGTGCTTTACA+AGG 0.561207 3_1:-22585980 None:intergenic
ATTCATCTTTACAATGCAGC+CGG 0.565105 3_1:-22585284 None:intergenic
ATGGGAGAATGGGATTTGGA+GGG 0.566954 3_1:+22585055 Msa0353030:CDS
ATGCATGTGCATGGATTGCA+TGG 0.568158 3_1:-22584648 None:intergenic
AGTAATTAATCCAACGAAGA+CGG 0.569053 3_1:-22582701 None:intergenic
TGGGTGCCCAAGATTCCATA+AGG 0.570181 3_1:-22585728 None:intergenic
GGGTTTGGAAGTCATGGGCA+AGG 0.571571 3_1:+22585019 Msa0353030:CDS
AACGAACCTTAAGGTGCAGC+CGG 0.573342 3_1:+22585200 Msa0353030:three_prime_UTR
AGAACTAATGACATTATGCA+TGG 0.576802 3_1:+22584598 Msa0353030:CDS
CTAATTCTACTTTCTAGTGG+AGG 0.578837 3_1:-22584878 None:intergenic
ACCATGAGAAGACATTGACT+TGG 0.579728 3_1:-22585640 None:intergenic
TTCAAGGAGAAAAGGAAGAG+TGG 0.581796 3_1:-22585323 None:intergenic
ATTTCATTGTCGGTACGACC+AGG 0.583529 3_1:-22584425 None:intergenic
AACCATGGTATGCATGTGCA+TGG 0.586474 3_1:-22584657 None:intergenic
TCCAAACAACAGTGACACTT+CGG 0.586789 3_1:+22584514 Msa0353030:CDS
ATGTCTTCAATCAATATGCA+AGG 0.592778 3_1:+22585694 Msa0353030:three_prime_UTR
ATGATGAGTTCTTCCTCTTG+TGG 0.593884 3_1:-22582756 None:intergenic
TCATTTAGAAATGTCAAAAG+AGG 0.599559 3_1:+22586071 Msa0353030:three_prime_UTR
GAGAGATCAGAGGGGACAAG+GGG 0.603225 3_1:-22585158 None:intergenic
TTAGCAGTGTTTATAGCACT+AGG 0.605228 3_1:+22586125 Msa0353030:three_prime_UTR
TAGGTAATACTATACACCGT+TGG 0.605293 3_1:+22585427 Msa0353030:three_prime_UTR
CAATTGTTGAATTAATCCAA+CGG 0.606586 3_1:-22585443 None:intergenic
TGTTTGGGTTTGGAAGTCAT+GGG 0.607029 3_1:+22585014 Msa0353030:CDS
CCAATTTAGAGAGAGATCAG+AGG 0.607332 3_1:-22585168 None:intergenic
TGATGATGAAGTTGATGATG+AGG 0.619533 3_1:-22584624 None:intergenic
AATTAAACTTGGAAATCAAG+AGG 0.628285 3_1:-22585106 None:intergenic
ACATTAACAAGAGCAAGCTA+AGG 0.643937 3_1:+22582559 Msa0353030:CDS
AAAAGGTAGATGGGCCGCAG+AGG 0.645421 3_1:+22585478 Msa0353030:three_prime_UTR
CATTGTAAAGATGAATGTAG+AGG 0.647469 3_1:+22585291 Msa0353030:three_prime_UTR
GCTTTACAAGGAAACCCACA+AGG 0.648903 3_1:-22585968 None:intergenic
ATAACGGTTGTTAGACAACA+AGG 0.651413 3_1:-22584705 None:intergenic
AATGCTGGTCTTCAAAGGTG+TGG 0.659770 3_1:+22582669 Msa0353030:CDS
ATCCATGCACATGCATACCA+TGG 0.661611 3_1:+22584655 Msa0353030:CDS
TTGAGACCTGATCTTAAGCG+CGG 0.663731 3_1:+22582723 Msa0353030:CDS
AGGTTGGTACAAATAATCAA+AGG 0.668289 3_1:+22586015 Msa0353030:three_prime_UTR
ACCTGTTGCCAAGAATGGAG+TGG 0.673651 3_1:-22582785 None:intergenic
TAAACTTGGAAATCAAGAGG+AGG 0.676931 3_1:-22585103 None:intergenic
TCACATTCAAAACTCCAATG+AGG 0.682309 3_1:+22584988 Msa0353030:CDS
GAAAGGGTTATGGTCACCTG+AGG 0.691016 3_1:+22582581 Msa0353030:CDS
TACATGATAACTAAAGGACA+AGG 0.707656 3_1:+22582624 Msa0353030:CDS
AAATTGGTCAGGTAAAACCA+TGG 0.714456 3_1:-22584672 None:intergenic
ATAGAGGACGAGATCCTCTG+CGG 0.733801 3_1:-22585492 None:intergenic
GGAAGTAAGAGGGGTCATAG+CGG 0.749256 3_1:-22585366 None:intergenic
TTATAGCACTAGGAACAATG+TGG 0.760025 3_1:+22586135 Msa0353030:three_prime_UTR
CTTTACAAGGAAACCCACAA+GGG 0.761370 3_1:-22585967 None:intergenic
AATTTAGAGAGAGATCAGAG+GGG 0.794291 3_1:-22585166 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATATATTTTTTTTTTTT+TGG + chr3_1:22583295-22583314 Msa0353030:intron 0.0%
!!! AAATATTTTAAAAAAATTAA+GGG - chr3_1:22583574-22583593 None:intergenic 0.0%
!!! AAAATATTTTAAAAAAATTA+AGG - chr3_1:22583575-22583594 None:intergenic 0.0%
!!! TTTTTTAAAATATTTTAATT+AGG + chr3_1:22583579-22583598 Msa0353030:intron 0.0%
!! TATATACATATAGAATAATT+TGG + chr3_1:22583706-22583725 Msa0353030:intron 10.0%
!! TCAAAAAAAAAAAAAAAAGT+TGG - chr3_1:22583775-22583794 None:intergenic 10.0%
!!! AACTTTTTTTTTTTTTTTTG+AGG + chr3_1:22583774-22583793 Msa0353030:intron 10.0%
!!! ACTTTTTTTTTTTTTTTTGA+GGG + chr3_1:22583775-22583794 Msa0353030:intron 10.0%
!! AAAGTGAATTAAAAAAATAT+AGG - chr3_1:22584000-22584019 None:intergenic 10.0%
!!! TATTTATTATTACATCTTTT+GGG - chr3_1:22584049-22584068 None:intergenic 10.0%
!!! TTATTTATTATTACATCTTT+TGG - chr3_1:22584050-22584069 None:intergenic 10.0%
!! GTTATTCAAAAAAACAATTA+CGG - chr3_1:22582925-22582944 None:intergenic 15.0%
!!! ATATTTTTTTTATCTCTCAA+AGG - chr3_1:22583095-22583114 None:intergenic 15.0%
!! TTATAACTTCTTGATTAATA+AGG - chr3_1:22583189-22583208 None:intergenic 15.0%
!!! ATATTCATTTTGTTATTGAA+TGG - chr3_1:22583223-22583242 None:intergenic 15.0%
!! TTGAAATTTGATTGAAAATA+GGG + chr3_1:22583743-22583762 Msa0353030:intron 15.0%
!! TCAAATAAAGTTGTTAAAAA+AGG + chr3_1:22584096-22584115 Msa0353030:intron 15.0%
!! ATTAAATTAAAAATCGTAAC+TGG - chr3_1:22584164-22584183 None:intergenic 15.0%
!! TCATGTTACAAAAAATTATA+AGG + chr3_1:22584193-22584212 Msa0353030:intron 15.0%
!! AAATTATAAGGAAATATTGA+AGG + chr3_1:22584205-22584224 Msa0353030:intron 15.0%
!! AATAATTTATAAGTTTAGAG+TGG + chr3_1:22584244-22584263 Msa0353030:intron 15.0%
!!! AGTGTAACTTTTTTTTTATA+TGG + chr3_1:22584308-22584327 Msa0353030:intron 15.0%
!!! AAAATTCTTTATTTCATTGT+CGG - chr3_1:22584438-22584457 None:intergenic 15.0%
!!! ACAATGAAATAAAGAATTTT+TGG + chr3_1:22584438-22584457 Msa0353030:CDS 15.0%
!!! AATTGAAATTTTGCTATAAA+AGG + chr3_1:22585461-22585480 Msa0353030:three_prime_UTR 15.0%
!!! TGAATTATGGTTTTAAATTG+TGG - chr3_1:22582962-22582981 None:intergenic 20.0%
!! TATCAATTTCAGTAAAACAA+TGG - chr3_1:22583131-22583150 None:intergenic 20.0%
!!! TTGCTTGAATACTTTTTTAT+TGG - chr3_1:22583274-22583293 None:intergenic 20.0%
!! ATAAATCTTAAGATCTTAGT+GGG - chr3_1:22583683-22583702 None:intergenic 20.0%
!! TATAAATCTTAAGATCTTAG+TGG - chr3_1:22583684-22583703 None:intergenic 20.0%
!! GTTGAAATTTGATTGAAAAT+AGG + chr3_1:22583742-22583761 Msa0353030:intron 20.0%
!!! TTTTTTTTTTTTTTGAGGGA+AGG + chr3_1:22583779-22583798 Msa0353030:intron 20.0%
!!! TTTTTTTTTTTTTGAGGGAA+GGG + chr3_1:22583780-22583799 Msa0353030:intron 20.0%
!! TCACTTTGATATTTATTTGA+TGG + chr3_1:22584013-22584032 Msa0353030:intron 20.0%
!! AAATGCTAATAATTGAAGAA+GGG - chr3_1:22584277-22584296 None:intergenic 20.0%
!!! TTAATAAGTGTAACCTATTT+TGG + chr3_1:22584331-22584350 Msa0353030:intron 20.0%
!! AAAGAAGAAAAATCCAAAAT+AGG - chr3_1:22584347-22584366 None:intergenic 20.0%
!!! ATTTTGGATTTTTCTTCTTT+CGG + chr3_1:22584347-22584366 Msa0353030:intron 20.0%
!! ACATCAAAAACATTATCTAT+TGG - chr3_1:22584545-22584564 None:intergenic 20.0%
!!! ATTAGTTCTTGTTCATTAAT+TGG - chr3_1:22584587-22584606 None:intergenic 20.0%
!! AATGAAAAGACAATTAAACT+TGG - chr3_1:22585120-22585139 None:intergenic 20.0%
!! ATTTCTCTGTTTGAATTTAA+CGG + chr3_1:22585252-22585271 Msa0353030:three_prime_UTR 20.0%
!!! ACTTGTCTTTGTTTATATTT+TGG - chr3_1:22585776-22585795 None:intergenic 20.0%
!! ACATATATGTATGAAACAAA+AGG - chr3_1:22585799-22585818 None:intergenic 20.0%
!!! GTTTGTTATATTTTAGTGTT+AGG + chr3_1:22586166-22586185 Msa0353030:three_prime_UTR 20.0%
! GTAAGATACATGATAACTAA+AGG + chr3_1:22582618-22582637 Msa0353030:CDS 25.0%
!! TATTTTCATATTTGAACCCT+AGG + chr3_1:22582855-22582874 Msa0353030:intron 25.0%
! TGTCAAAAAACAAATCTTGA+AGG + chr3_1:22583021-22583040 Msa0353030:intron 25.0%
! GTCAAAAAACAAATCTTGAA+GGG + chr3_1:22583022-22583041 Msa0353030:intron 25.0%
! TCAAAAAACAAATCTTGAAG+GGG + chr3_1:22583023-22583042 Msa0353030:intron 25.0%
!!! TTCTCATTTTTTTGAGAGAA+GGG - chr3_1:22583438-22583457 None:intergenic 25.0%
!! CAGATTCTAAACCTTTTAAA+GGG + chr3_1:22583541-22583560 Msa0353030:intron 25.0%
! ATGTAAGTTAAACTTTCATC+TGG - chr3_1:22583615-22583634 None:intergenic 25.0%
! TAAATCTTAAGATCTTAGTG+GGG - chr3_1:22583682-22583701 None:intergenic 25.0%
! ATTTGATTGAAAATAGGGTT+TGG + chr3_1:22583748-22583767 Msa0353030:intron 25.0%
! GAAATGCTAATAATTGAAGA+AGG - chr3_1:22584278-22584297 None:intergenic 25.0%
! TTACTATAAACAATCTCAGA+TGG + chr3_1:22584381-22584400 Msa0353030:intron 25.0%
! ACTTGTGTTAAACAACTATT+TGG - chr3_1:22584761-22584780 None:intergenic 25.0%
! AATAGTTGTTTAACACAAGT+TGG + chr3_1:22584761-22584780 Msa0353030:CDS 25.0%
! TTCATAGTGATGATCATTAT+GGG + chr3_1:22584807-22584826 Msa0353030:CDS 25.0%
!!! ATTTTGGAGGCTAATAAAAT+GGG + chr3_1:22584830-22584849 Msa0353030:CDS 25.0%
! TATTATTGAAGTGGTTGTTA+TGG - chr3_1:22584949-22584968 None:intergenic 25.0%
! AATTAAACTTGGAAATCAAG+AGG - chr3_1:22585109-22585128 None:intergenic 25.0%
!! CAGCTTTTAGATTAATCTAA+TGG + chr3_1:22585401-22585420 Msa0353030:three_prime_UTR 25.0%
! TAGATTAATCTAATGGCTAT+AGG + chr3_1:22585408-22585427 Msa0353030:three_prime_UTR 25.0%
! CAATTGTTGAATTAATCCAA+CGG - chr3_1:22585446-22585465 None:intergenic 25.0%
!!! ATTTTGCTATAAAAGGTAGA+TGG + chr3_1:22585468-22585487 Msa0353030:three_prime_UTR 25.0%
!!! TTTTGCTATAAAAGGTAGAT+GGG + chr3_1:22585469-22585488 Msa0353030:three_prime_UTR 25.0%
! TAGAAAGTCTAAGAGAAAAT+TGG - chr3_1:22585613-22585632 None:intergenic 25.0%
! ACATTTGTGTATATGCAAAT+TGG - chr3_1:22585678-22585697 None:intergenic 25.0%
! TAAAATACCTTATGGAATCT+TGG + chr3_1:22585721-22585740 Msa0353030:three_prime_UTR 25.0%
! AAAATACCTTATGGAATCTT+GGG + chr3_1:22585722-22585741 Msa0353030:three_prime_UTR 25.0%
! AACTAAAGACAAGAAAGAAT+GGG - chr3_1:22585750-22585769 None:intergenic 25.0%
!!! ACATTCATTGTTTCTTTTCA+TGG + chr3_1:22585828-22585847 Msa0353030:three_prime_UTR 25.0%
!!! TAGTTTTGCAATGAAAATTG+CGG + chr3_1:22585898-22585917 Msa0353030:three_prime_UTR 25.0%
!! AAGCACTTTGTGTAATTTTT+CGG + chr3_1:22585987-22586006 Msa0353030:three_prime_UTR 25.0%
! TTCAAATGAAATGTGAATAG+TGG + chr3_1:22586048-22586067 Msa0353030:three_prime_UTR 25.0%
! TCATTTAGAAATGTCAAAAG+AGG + chr3_1:22586071-22586090 Msa0353030:three_prime_UTR 25.0%
!!! ATTTTAGTGTTAGGTGATAT+AGG + chr3_1:22586175-22586194 Msa0353030:three_prime_UTR 25.0%
! GATCTTTGAGAAAGCTATAT+AGG - chr3_1:22582381-22582400 None:intergenic 30.0%
TACATGATAACTAAAGGACA+AGG + chr3_1:22582624-22582643 Msa0353030:CDS 30.0%
AGTAATTAATCCAACGAAGA+CGG - chr3_1:22582704-22582723 None:intergenic 30.0%
!!! CTTCTCATTTTTTTGAGAGA+AGG - chr3_1:22583439-22583458 None:intergenic 30.0%
! GCAGATTCTAAACCTTTTAA+AGG + chr3_1:22583540-22583559 Msa0353030:intron 30.0%
AAATCTTAAGATCTTAGTGG+GGG - chr3_1:22583681-22583700 None:intergenic 30.0%
TAATATGTAACACAGACAGT+TGG - chr3_1:22583812-22583831 None:intergenic 30.0%
!! TCATAAAGCATCGATTATTG+AGG + chr3_1:22583936-22583955 Msa0353030:intron 30.0%
! TTTCAATCTTTTCTTCAGTG+TGG - chr3_1:22584468-22584487 None:intergenic 30.0%
AGAACTAATGACATTATGCA+TGG + chr3_1:22584598-22584617 Msa0353030:CDS 30.0%
ACAAGGAAAATGGATCAAAT+TGG - chr3_1:22584691-22584710 None:intergenic 30.0%
TTGTTAGACAACAAGGAAAA+TGG - chr3_1:22584701-22584720 None:intergenic 30.0%
GAAAACTTGTCATGTCATAA+CGG - chr3_1:22584724-22584743 None:intergenic 30.0%
! TTTAACACAAGTTGGCAATA+TGG + chr3_1:22584769-22584788 Msa0353030:CDS 30.0%
!! GCAATATGGTTGATGATATT+GGG + chr3_1:22584783-22584802 Msa0353030:CDS 30.0%
CTTCATAGTGATGATCATTA+TGG + chr3_1:22584806-22584825 Msa0353030:CDS 30.0%
! TGATGATCATTATGGGATTT+TGG + chr3_1:22584814-22584833 Msa0353030:CDS 30.0%
!! GATTTTGGAGGCTAATAAAA+TGG + chr3_1:22584829-22584848 Msa0353030:CDS 30.0%
!! TTTTGGAGGCTAATAAAATG+GGG + chr3_1:22584831-22584850 Msa0353030:CDS 30.0%
ATGCTAATTCTACTTTCTAG+TGG - chr3_1:22584884-22584903 None:intergenic 30.0%
CACATTATGATCACCAATTA+GGG - chr3_1:22584921-22584940 None:intergenic 30.0%
TCACATTATGATCACCAATT+AGG - chr3_1:22584922-22584941 None:intergenic 30.0%
TGAAGCAACTATTATTGAAG+TGG - chr3_1:22584958-22584977 None:intergenic 30.0%
CAAGGAGAAAACTTAAGAAT+GGG + chr3_1:22585037-22585056 Msa0353030:CDS 30.0%
AAAACTTAAGAATGGGAGAA+TGG + chr3_1:22585044-22585063 Msa0353030:CDS 30.0%
AAACTTAAGAATGGGAGAAT+GGG + chr3_1:22585045-22585064 Msa0353030:CDS 30.0%
! CAGAGAAATTTTCTCTATTC+AGG - chr3_1:22585241-22585260 None:intergenic 30.0%
CATTGTAAAGATGAATGTAG+AGG + chr3_1:22585291-22585310 Msa0353030:three_prime_UTR 30.0%
CAAAGATATTCAAGGAGAAA+AGG - chr3_1:22585334-22585353 None:intergenic 30.0%
TTTCTCCTTGAATATCTTTG+TGG + chr3_1:22585334-22585353 Msa0353030:three_prime_UTR 30.0%
GATTTCCACAAAGATATTCA+AGG - chr3_1:22585342-22585361 None:intergenic 30.0%
! ATTTTACTGAGGAAGTAAGA+GGG - chr3_1:22585379-22585398 None:intergenic 30.0%
! TAAAAGCTGAGATTTTACTG+AGG - chr3_1:22585390-22585409 None:intergenic 30.0%
AGAGATAGAAAGACTTTGAA+AGG - chr3_1:22585524-22585543 None:intergenic 30.0%
GTGAAGATTAAGAGAAATCA+AGG - chr3_1:22585582-22585601 None:intergenic 30.0%
ATGTCTTCAATCAATATGCA+AGG + chr3_1:22585694-22585713 Msa0353030:three_prime_UTR 30.0%
AAGGTGACTAAAATACCTTA+TGG + chr3_1:22585713-22585732 Msa0353030:three_prime_UTR 30.0%
GAACTAAAGACAAGAAAGAA+TGG - chr3_1:22585751-22585770 None:intergenic 30.0%
ATCTACCACAACATACAATT+GGG - chr3_1:22585869-22585888 None:intergenic 30.0%
TATCTACCACAACATACAAT+TGG - chr3_1:22585870-22585889 None:intergenic 30.0%
! ATTACACAAAGTGCTTTACA+AGG - chr3_1:22585983-22586002 None:intergenic 30.0%
!! TGTGTAATTTTTCGGTATGT+AGG + chr3_1:22585995-22586014 Msa0353030:three_prime_UTR 30.0%
!! TAATTTTTCGGTATGTAGGT+TGG + chr3_1:22585999-22586018 Msa0353030:three_prime_UTR 30.0%
!! AGGTTGGTACAAATAATCAA+AGG + chr3_1:22586015-22586034 Msa0353030:three_prime_UTR 30.0%
CAAAAGAGGCAAATAAATGT+AGG + chr3_1:22586085-22586104 Msa0353030:three_prime_UTR 30.0%
!! TCTTATGAAGAAGCACTTTG+AGG - chr3_1:22582439-22582458 None:intergenic 35.0%
! AGGAAACCTGATTTGATCAT+GGG + chr3_1:22582522-22582541 Msa0353030:CDS 35.0%
! TCTTTTCCCATGATCAAATC+AGG - chr3_1:22582531-22582550 None:intergenic 35.0%
ACATTAACAAGAGCAAGCTA+AGG + chr3_1:22582559-22582578 Msa0353030:CDS 35.0%
TAACTAAAGGACAAGGTTGT+TGG + chr3_1:22582631-22582650 Msa0353030:CDS 35.0%
ATTCATTTCCACTCCATTCT+TGG + chr3_1:22582777-22582796 Msa0353030:CDS 35.0%
!! TGGACTAGTTAAATGACCTA+GGG - chr3_1:22582874-22582893 None:intergenic 35.0%
CACACCATAGCTATAAATTG+CGG + chr3_1:22582892-22582911 Msa0353030:intron 35.0%
AAGACCGCAATTTATAGCTA+TGG - chr3_1:22582899-22582918 None:intergenic 35.0%
CAAAGATACTCTTAGTTGAG+AGG + chr3_1:22582997-22583016 Msa0353030:intron 35.0%
TCCAACAAGACTACTTTGAA+AGG + chr3_1:22583063-22583082 Msa0353030:intron 35.0%
!! TCCTTTCAAAGTAGTCTTGT+TGG - chr3_1:22583067-22583086 None:intergenic 35.0%
ATCCCAAAATGTAACCAATC+TGG + chr3_1:22583461-22583480 Msa0353030:intron 35.0%
!! GTCCAGATTGGTTACATTTT+GGG - chr3_1:22583466-22583485 None:intergenic 35.0%
!! TGTCCAGATTGGTTACATTT+TGG - chr3_1:22583467-22583486 None:intergenic 35.0%
AGAATCTGCTATTGCTATGA+AGG - chr3_1:22583529-22583548 None:intergenic 35.0%
AGGGTACATTTCCCTTTAAA+AGG - chr3_1:22583555-22583574 None:intergenic 35.0%
ACATGCATATTCATCGCATA+AGG + chr3_1:22583631-22583650 Msa0353030:intron 35.0%
AATCTTAAGATCTTAGTGGG+GGG - chr3_1:22583680-22583699 None:intergenic 35.0%
!!! TTTTTTTTGAGGGAAGGGTT+TGG + chr3_1:22583785-22583804 Msa0353030:intron 35.0%
! TATAAGCATGCTAGGGTTTT+TGG + chr3_1:22583861-22583880 Msa0353030:intron 35.0%
GGCAGCATTAGCTATTATTA+AGG + chr3_1:22583882-22583901 Msa0353030:intron 35.0%
GGTCTATAGCTTTCAACTTA+AGG + chr3_1:22583903-22583922 Msa0353030:intron 35.0%
!! TGATGATGAAGTTGATGATG+AGG - chr3_1:22584627-22584646 None:intergenic 35.0%
AAATTGGTCAGGTAAAACCA+TGG - chr3_1:22584675-22584694 None:intergenic 35.0%
GAAAATGGATCAAATTGGTC+AGG - chr3_1:22584686-22584705 None:intergenic 35.0%
ATAACGGTTGTTAGACAACA+AGG - chr3_1:22584708-22584727 None:intergenic 35.0%
!! GGCAATATGGTTGATGATAT+TGG + chr3_1:22584782-22584801 Msa0353030:CDS 35.0%
! TGATCATTATGGGATTTTGG+AGG + chr3_1:22584817-22584836 Msa0353030:CDS 35.0%
! CTAATTCTACTTTCTAGTGG+AGG - chr3_1:22584881-22584900 None:intergenic 35.0%
TCACATTCAAAACTCCAATG+AGG + chr3_1:22584988-22585007 Msa0353030:CDS 35.0%
GCAAGGAGAAAACTTAAGAA+TGG + chr3_1:22585036-22585055 Msa0353030:CDS 35.0%
GAAATCAAGAGGAGGAAAAT+AGG - chr3_1:22585098-22585117 None:intergenic 35.0%
TAAACTTGGAAATCAAGAGG+AGG - chr3_1:22585106-22585125 None:intergenic 35.0%
AATTTAGAGAGAGATCAGAG+GGG - chr3_1:22585169-22585188 None:intergenic 35.0%
CAATTTAGAGAGAGATCAGA+GGG - chr3_1:22585170-22585189 None:intergenic 35.0%
ATACTCTACAACGAACCTTA+AGG + chr3_1:22585191-22585210 Msa0353030:three_prime_UTR 35.0%
AATTTAACGGTACGTACAAC+CGG + chr3_1:22585265-22585284 Msa0353030:three_prime_UTR 35.0%
ATTCATCTTTACAATGCAGC+CGG - chr3_1:22585287-22585306 None:intergenic 35.0%
! TTTTACTGAGGAAGTAAGAG+GGG - chr3_1:22585378-22585397 None:intergenic 35.0%
! GATTTTACTGAGGAAGTAAG+AGG - chr3_1:22585380-22585399 None:intergenic 35.0%
TAGGTAATACTATACACCGT+TGG + chr3_1:22585427-22585446 Msa0353030:three_prime_UTR 35.0%
! CTTTGAAAGGATTGTCATAG+AGG - chr3_1:22585511-22585530 None:intergenic 35.0%
TACAACCCAATTGTATGTTG+TGG + chr3_1:22585861-22585880 Msa0353030:three_prime_UTR 35.0%
! GTGTATACATAGTCTTGCTT+CGG + chr3_1:22585924-22585943 Msa0353030:three_prime_UTR 35.0%
TTAGCAGTGTTTATAGCACT+AGG + chr3_1:22586125-22586144 Msa0353030:three_prime_UTR 35.0%
TTATAGCACTAGGAACAATG+TGG + chr3_1:22586135-22586154 Msa0353030:three_prime_UTR 35.0%
CTCTCTCTCTAATGCAAATG+AGG + chr3_1:22582502-22582521 Msa0353030:exon 40.0%
! GAGGAAACCTGATTTGATCA+TGG + chr3_1:22582521-22582540 Msa0353030:CDS 40.0%
AACAAGAGCAAGCTAAGGAA+AGG + chr3_1:22582564-22582583 Msa0353030:CDS 40.0%
ACAAGAGCAAGCTAAGGAAA+GGG + chr3_1:22582565-22582584 Msa0353030:CDS 40.0%
ATGATGAGTTCTTCCTCTTG+TGG - chr3_1:22582759-22582778 None:intergenic 40.0%
AATGTACCTGTTGCCAAGAA+TGG - chr3_1:22582793-22582812 None:intergenic 40.0%
!! GTGGACTAGTTAAATGACCT+AGG - chr3_1:22582875-22582894 None:intergenic 40.0%
CGCAATTTATAGCTATGGTG+TGG - chr3_1:22582894-22582913 None:intergenic 40.0%
GCATTCTGACGTGTGAATTA+TGG - chr3_1:22582975-22582994 None:intergenic 40.0%
GCAGTGAAAATTGTCCAGAT+TGG - chr3_1:22583478-22583497 None:intergenic 40.0%
ATCTTAAGATCTTAGTGGGG+GGG - chr3_1:22583679-22583698 None:intergenic 40.0%
ACGTAGCATATAAGCATGCT+AGG + chr3_1:22583853-22583872 Msa0353030:intron 40.0%
CGTAGCATATAAGCATGCTA+GGG + chr3_1:22583854-22583873 Msa0353030:intron 40.0%
! TGGAGTAGAGTTGTTGTTGT+TGG - chr3_1:22584492-22584511 None:intergenic 40.0%
TCCAAACAACAGTGACACTT+CGG + chr3_1:22584514-22584533 Msa0353030:CDS 40.0%
!! GAAGATAAGAGTGCCCTAAT+TGG + chr3_1:22584905-22584924 Msa0353030:CDS 40.0%
AACTCCAATGAGGACATGTT+TGG + chr3_1:22584998-22585017 Msa0353030:CDS 40.0%
ACTCCAATGAGGACATGTTT+GGG + chr3_1:22584999-22585018 Msa0353030:CDS 40.0%
AAACCCAAACATGTCCTCAT+TGG - chr3_1:22585005-22585024 None:intergenic 40.0%
! AATGAGGACATGTTTGGGTT+TGG + chr3_1:22585004-22585023 Msa0353030:CDS 40.0%
! ATGTTTGGGTTTGGAAGTCA+TGG + chr3_1:22585013-22585032 Msa0353030:CDS 40.0%
! TGTTTGGGTTTGGAAGTCAT+GGG + chr3_1:22585014-22585033 Msa0353030:CDS 40.0%
AAGAATGGGAGAATGGGATT+TGG + chr3_1:22585051-22585070 Msa0353030:CDS 40.0%
CCAATTTAGAGAGAGATCAG+AGG - chr3_1:22585171-22585190 None:intergenic 40.0%
CCTCTGATCTCTCTCTAAAT+TGG + chr3_1:22585168-22585187 Msa0353030:three_prime_UTR 40.0%
TTCAAGGAGAAAAGGAAGAG+TGG - chr3_1:22585326-22585345 None:intergenic 40.0%
!! ATGAGAAGACATTGACTTGG+AGG - chr3_1:22585640-22585659 None:intergenic 40.0%
TCCAAGTCAATGTCTTCTCA+TGG + chr3_1:22585639-22585658 Msa0353030:three_prime_UTR 40.0%
! ACCATGAGAAGACATTGACT+TGG - chr3_1:22585643-22585662 None:intergenic 40.0%
CTTTACAAGGAAACCCACAA+GGG - chr3_1:22585970-22585989 None:intergenic 40.0%
GCAAGCTAAGGAAAGGGTTA+TGG + chr3_1:22582571-22582590 Msa0353030:CDS 45.0%
ACCTGAGGAAGATGAGAAGT+TGG + chr3_1:22582596-22582615 Msa0353030:CDS 45.0%
ACCAACTTCTCATCTTCCTC+AGG - chr3_1:22582600-22582619 None:intergenic 45.0%
GTTGTTGGAGTGACATTGCT+AGG + chr3_1:22582646-22582665 Msa0353030:CDS 45.0%
AGTGACATTGCTAGGAATGC+TGG + chr3_1:22582654-22582673 Msa0353030:CDS 45.0%
!! CTAGGAATGCTGGTCTTCAA+AGG + chr3_1:22582664-22582683 Msa0353030:CDS 45.0%
!! AATGCTGGTCTTCAAAGGTG+TGG + chr3_1:22582669-22582688 Msa0353030:CDS 45.0%
GTAAAAGTTGCCGTCTTCGT+TGG + chr3_1:22582691-22582710 Msa0353030:CDS 45.0%
TTGAGACCTGATCTTAAGCG+CGG + chr3_1:22582723-22582742 Msa0353030:CDS 45.0%
AGGTAGACGTGCTGCAATTT+GGG - chr3_1:22584408-22584427 None:intergenic 45.0%
ATTTCATTGTCGGTACGACC+AGG - chr3_1:22584428-22584447 None:intergenic 45.0%
! GTGTCACTGTTGTTTGGAGA+TGG - chr3_1:22584512-22584531 None:intergenic 45.0%
! TCCGAAGTGTCACTGTTGTT+TGG - chr3_1:22584518-22584537 None:intergenic 45.0%
! ATGCATGTGCATGGATTGCA+TGG - chr3_1:22584651-22584670 None:intergenic 45.0%
ATCCATGCACATGCATACCA+TGG + chr3_1:22584655-22584674 Msa0353030:CDS 45.0%
AACCATGGTATGCATGTGCA+TGG - chr3_1:22584660-22584679 None:intergenic 45.0%
AATGGGAGAATGGGATTTGG+AGG + chr3_1:22585054-22585073 Msa0353030:CDS 45.0%
ATGGGAGAATGGGATTTGGA+GGG + chr3_1:22585055-22585074 Msa0353030:CDS 45.0%
CAGGTATAGTTGTCTACAGC+CGG - chr3_1:22585222-22585241 None:intergenic 45.0%
TTGCATTCTTTGTGCCCTTG+TGG + chr3_1:22585953-22585972 Msa0353030:three_prime_UTR 45.0%
TGCATTCTTTGTGCCCTTGT+GGG + chr3_1:22585954-22585973 Msa0353030:three_prime_UTR 45.0%
GCTTTACAAGGAAACCCACA+AGG - chr3_1:22585971-22585990 None:intergenic 45.0%
!! AATTAATTATTTATTTCAAA+AGG + chr3_1:22583364-22583383 Msa0353030:intron 5.0%
!! ATTAATTATTTATTTCAAAA+GGG + chr3_1:22583365-22583384 Msa0353030:intron 5.0%
GAAAGGGTTATGGTCACCTG+AGG + chr3_1:22582581-22582600 Msa0353030:CDS 50.0%
TCCACTCCATTCTTGGCAAC+AGG + chr3_1:22582784-22582803 Msa0353030:CDS 50.0%
ACCTGTTGCCAAGAATGGAG+TGG - chr3_1:22582788-22582807 None:intergenic 50.0%
TTGAGGTCTGTCTTGTGCAG+TGG + chr3_1:22583953-22583972 Msa0353030:intron 50.0%
CAGGTAGACGTGCTGCAATT+TGG - chr3_1:22584409-22584428 None:intergenic 50.0%
CAAATTGCAGCACGTCTACC+TGG + chr3_1:22584407-22584426 Msa0353030:CDS 50.0%
AGAGAGATCAGAGGGGACAA+GGG - chr3_1:22585162-22585181 None:intergenic 50.0%
AACGAACCTTAAGGTGCAGC+CGG + chr3_1:22585200-22585219 Msa0353030:three_prime_UTR 50.0%
GGAAGTAAGAGGGGTCATAG+CGG - chr3_1:22585369-22585388 None:intergenic 50.0%
ATAGAGGACGAGATCCTCTG+CGG - chr3_1:22585495-22585514 None:intergenic 50.0%
TGGGTGCCCAAGATTCCATA+AGG - chr3_1:22585731-22585750 None:intergenic 50.0%
AATGCGCCGCGCTTAAGATC+AGG - chr3_1:22582732-22582751 None:intergenic 55.0%
GGGTTTGGAAGTCATGGGCA+AGG + chr3_1:22585019-22585038 Msa0353030:CDS 55.0%
GAGAGATCAGAGGGGACAAG+GGG - chr3_1:22585161-22585180 None:intergenic 55.0%
GAGAGAGATCAGAGGGGACA+AGG - chr3_1:22585163-22585182 None:intergenic 55.0%
AAAAGGTAGATGGGCCGCAG+AGG + chr3_1:22585478-22585497 Msa0353030:three_prime_UTR 55.0%
! CGGCGCATTTTCGCCACAAG+AGG + chr3_1:22582743-22582762 Msa0353030:CDS 60.0%
CAGAGGGGACAAGGGGTGAT+TGG - chr3_1:22585154-22585173 None:intergenic 60.0%
CTACAGCCGGCTGCACCTTA+AGG - chr3_1:22585209-22585228 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 22582344 22586217 22582344 ID=Msa0353030;Name=Msa0353030
chr3_1 mRNA 22582344 22586217 22582344 ID=Msa0353030-mRNA-1;Parent=Msa0353030;Name=Msa0353030-mRNA-1;_AED=0.03;_eAED=0.03;_QI=169|1|1|1|1|1|2|1091|339
chr3_1 exon 22582344 22582805 22582344 ID=Msa0353030-mRNA-1:exon:5071;Parent=Msa0353030-mRNA-1
chr3_1 exon 22584400 22586217 22584400 ID=Msa0353030-mRNA-1:exon:5072;Parent=Msa0353030-mRNA-1
chr3_1 five_prime_UTR 22582344 22582512 22582344 ID=Msa0353030-mRNA-1:five_prime_utr;Parent=Msa0353030-mRNA-1
chr3_1 CDS 22582513 22582805 22582513 ID=Msa0353030-mRNA-1:cds;Parent=Msa0353030-mRNA-1
chr3_1 CDS 22584400 22585126 22584400 ID=Msa0353030-mRNA-1:cds;Parent=Msa0353030-mRNA-1
chr3_1 three_prime_UTR 22585127 22586217 22585127 ID=Msa0353030-mRNA-1:three_prime_utr;Parent=Msa0353030-mRNA-1
Gene Sequence

>Msa0353030

ATGCAAATGAGGAAACCTGATTTGATCATGGGAAAAGACAACAACAACATTAACAAGAGCAAGCTAAGGAAAGGGTTATGGTCACCTGAGGAAGATGAGAAGTTGGTAAGATACATGATAACTAAAGGACAAGGTTGTTGGAGTGACATTGCTAGGAATGCTGGTCTTCAAAGGTGTGGTAAAAGTTGCCGTCTTCGTTGGATTAATTACTTGAGACCTGATCTTAAGCGCGGCGCATTTTCGCCACAAGAGGAAGAACTCATCATTCATTTCCACTCCATTCTTGGCAACAGATGGTCCCAAATTGCAGCACGTCTACCTGGTCGTACCGACAATGAAATAAAGAATTTTTGGAATTCCACACTGAAGAAAAGATTGAAAACCAACAACAACAACTCTACTCCATCTCCAAACAACAGTGACACTTCGGATCAACCAATAGATAATGTTTTTGATGTGAAAAATAACATGATCATGCCAATTAATGAACAAGAACTAATGACATTATGCATGGATTCCTCATCATCAACTTCATCATCATCCATGCAATCCATGCACATGCATACCATGGTTTTACCTGACCAATTTGATCCATTTTCCTTGTTGTCTAACAACCGTTATGACATGACAAGTTTTCATGCTCATGACTTGCCAAATAGTTGTTTAACACAAGTTGGCAATATGGTTGATGATATTGGGCTTCATAGTGATGATCATTATGGGATTTTGGAGGCTAATAAAATGGGGTTATTAGAAAATGATTTTGAACTTCCTCCACTAGAAAGTAGAATTAGCATTGAAGATAAGAGTGCCCTAATTGGTGATCATAATGTGAAAAGCCATAACAACCACTTCAATAATAGTTGCTTCAATAACACTAATCACATTCAAAACTCCAATGAGGACATGTTTGGGTTTGGAAGTCATGGGCAAGGAGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGACATATCCTATTTTCCTCCTCTTGATTTCCAAGTTTAA
Protein sequence

>Msa0353030

MQMRKPDLIMGKDNNNINKSKLRKGLWSPEEDEKLVRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKTNNNNSTPSPNNSDTSDQPIDNVFDVKNNMIMPINEQELMTLCMDSSSSTSSSSMQSMHMHTMVLPDQFDPFSLLSNNRYDMTSFHAHDLPNSCLTQVGNMVDDIGLHSDDHYGILEANKMGLLENDFELPPLESRISIEDKSALIGDHNVKSHNNHFNNSCFNNTNHIQNSNEDMFGFGSHGQGENLRMGEWDLEGLMQDISYFPPLDFQV*