Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356870 | XP_024633839.1 | 97.143 | 490 | 14 | 0 | 1 | 490 | 1 | 490 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356870 | sp|O48791|SCAB1_ARATH | 73.887 | 494 | 121 | 3 | 1 | 488 | 1 | 492 | 0.0 | 753 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356870 | A0A396IPJ6 | 97.143 | 490 | 14 | 0 | 1 | 490 | 1 | 490 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0356870 | Msa0403140 | 0.960342 | 1.892544e-118 | -8.615850e-47 |
| Msa0356870 | Msa0528210 | 0.816706 | 4.815508e-52 | -8.615850e-47 |
| Msa0356870 | Msa1130030 | 0.814584 | 1.430188e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356870 | MtrunA17_Chr3g0093711 | 97.143 | 490 | 14 | 0 | 1 | 490 | 1 | 490 | 0.0 | 986 |
| Msa0356870 | MtrunA17_Chr5g0441311 | 83.910 | 491 | 75 | 2 | 1 | 487 | 12 | 502 | 0.0 | 847 |
| Msa0356870 | MtrunA17_Chr7g0255781 | 58.197 | 488 | 198 | 3 | 1 | 483 | 1 | 487 | 0.0 | 574 |
| Msa0356870 | MtrunA17_Chr6g0482421 | 58.120 | 117 | 34 | 3 | 91 | 206 | 11 | 113 | 5.88e-29 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356870 | AT2G26770.2 | 73.887 | 494 | 121 | 3 | 1 | 488 | 1 | 492 | 0.0 | 753 |
| Msa0356870 | AT2G26770.3 | 73.887 | 494 | 121 | 3 | 1 | 488 | 1 | 492 | 0.0 | 753 |
| Msa0356870 | AT2G26770.1 | 73.887 | 494 | 121 | 3 | 1 | 488 | 1 | 492 | 0.0 | 753 |
| Msa0356870 | AT2G40820.4 | 54.140 | 471 | 209 | 3 | 19 | 483 | 47 | 516 | 0.0 | 522 |
| Msa0356870 | AT2G40820.3 | 54.140 | 471 | 209 | 3 | 19 | 483 | 34 | 503 | 0.0 | 521 |
| Msa0356870 | AT2G40820.2 | 54.140 | 471 | 209 | 3 | 19 | 483 | 22 | 491 | 0.0 | 521 |
| Msa0356870 | AT2G40820.1 | 54.140 | 471 | 209 | 3 | 19 | 483 | 22 | 491 | 0.0 | 521 |
| Msa0356870 | AT3G56480.1 | 55.579 | 466 | 199 | 4 | 25 | 483 | 25 | 489 | 5.94e-180 | 514 |
| Msa0356870 | AT2G40820.5 | 53.403 | 382 | 175 | 2 | 104 | 483 | 1 | 381 | 2.46e-147 | 427 |
Find 124 sgRNAs with CRISPR-Local
Find 509 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTTTCTGCTACCTTCT+TGG | 0.111033 | 3_1:+37120047 | Msa0356870:five_prime_UTR |
| CAGAAAATTCAGACAATATT+TGG | 0.112490 | 3_1:-37127540 | None:intergenic |
| CTGCGGCGCAGGCACTATTT+TGG | 0.185288 | 3_1:+37126965 | Msa0356870:CDS |
| CGATTTCCTACTTATCAAAT+TGG | 0.208725 | 3_1:+37120362 | Msa0356870:CDS |
| CCTCATTTATATGAATTAGA+AGG | 0.272590 | 3_1:+37124035 | Msa0356870:CDS |
| TCCTTCATCGATAGCACTTT+CGG | 0.275084 | 3_1:-37120410 | None:intergenic |
| GATGGGTTGGAATCCTTAAA+AGG | 0.280491 | 3_1:+37120718 | Msa0356870:CDS |
| GAAAGTTTAGAGTACAATTA+TGG | 0.281165 | 3_1:+37127446 | Msa0356870:three_prime_UTR |
| GATGATGTGAATCATTTGTC+TGG | 0.288215 | 3_1:-37126640 | None:intergenic |
| CGTCCAACGTCAAAAGGTTC+TGG | 0.297621 | 3_1:-37126009 | None:intergenic |
| TGAACTCGAATAGAATTCTT+TGG | 0.297696 | 3_1:-37126735 | None:intergenic |
| CCTTCATCGATAGCACTTTC+GGG | 0.304015 | 3_1:-37120409 | None:intergenic |
| TGTACACGAAGCTATTTCTT+TGG | 0.342988 | 3_1:+37120768 | Msa0356870:CDS |
| ACAAGGATGACCCGCAGTTT+TGG | 0.345696 | 3_1:+37120281 | Msa0356870:CDS |
| GCGGGTGGCGGGAAGAAATA+AGG | 0.347173 | 3_1:+37120741 | Msa0356870:CDS |
| ATTGAACATTCTGAAAGTTC+GGG | 0.352004 | 3_1:-37124110 | None:intergenic |
| AATTGAACATTCTGAAAGTT+CGG | 0.353771 | 3_1:-37124111 | None:intergenic |
| AACACGAGCTTCAAGCATTA+AGG | 0.356617 | 3_1:+37123768 | Msa0356870:CDS |
| CCACTCTTTGAACTGCTGCC+CGG | 0.360438 | 3_1:-37122282 | None:intergenic |
| TTGCAGTTCAGTTAACTCAT+AGG | 0.368181 | 3_1:+37121552 | Msa0356870:CDS |
| GAGAGAATGTCTCAAACTTC+AGG | 0.371204 | 3_1:+37122325 | Msa0356870:CDS |
| TTCTGGGGCATAAACTGATT+TGG | 0.372582 | 3_1:-37125992 | None:intergenic |
| ATCACCCGAAAATGCCAAAA+AGG | 0.374989 | 3_1:+37124148 | Msa0356870:CDS |
| CACTCTTTGAACTGCTGCCC+GGG | 0.388647 | 3_1:-37122281 | None:intergenic |
| GATTCCATAGCACAATAAAA+AGG | 0.394049 | 3_1:-37127338 | None:intergenic |
| TTAGATCCAATTTGATAAGT+AGG | 0.394532 | 3_1:-37120368 | None:intergenic |
| GTAGCCAAACCTGGTTCAAT+TGG | 0.395153 | 3_1:-37126090 | None:intergenic |
| TTACAGATTATGAGTAGTTA+AGG | 0.398519 | 3_1:-37120115 | None:intergenic |
| TCCCACATTAAGTATATGAA+TGG | 0.411218 | 3_1:-37126672 | None:intergenic |
| AGCCTTGAGGTGCTAATTGA+TGG | 0.411294 | 3_1:+37127497 | Msa0356870:three_prime_UTR |
| CTTTGTGGAGTTCGAGGAGG+TGG | 0.411973 | 3_1:+37126937 | Msa0356870:CDS |
| TCCTTAAAAGGGCGGGTGGC+GGG | 0.420523 | 3_1:+37120730 | Msa0356870:CDS |
| CTTCAGCTTTGTGGAGTTCG+AGG | 0.431632 | 3_1:+37126931 | Msa0356870:intron |
| AGGTGGGAATGCTGCGGCGC+AGG | 0.440198 | 3_1:+37126954 | Msa0356870:CDS |
| ACAAAAGAGAGTCCTTGCTT+TGG | 0.450797 | 3_1:-37126991 | None:intergenic |
| TTAGAGTACAATTATGGAGT+TGG | 0.457153 | 3_1:+37127452 | Msa0356870:three_prime_UTR |
| TGCTAAGAAACTTGTATATG+AGG | 0.457477 | 3_1:+37122225 | Msa0356870:CDS |
| CATTTGAATCAGAGAGAGAA+AGG | 0.460633 | 3_1:+37127019 | Msa0356870:CDS |
| CCAGTTGAGGGACCAGGACT+GGG | 0.460817 | 3_1:+37119950 | None:intergenic |
| AAAGAAGATCAGAGATGGGT+TGG | 0.465534 | 3_1:+37120705 | Msa0356870:CDS |
| TGAGAATGAAGCTTTGTAAA+GGG | 0.466239 | 3_1:+37126699 | Msa0356870:CDS |
| AGTATATGAATGGATTCAGT+TGG | 0.467239 | 3_1:-37126662 | None:intergenic |
| GTCCAACGTCAAAAGGTTCT+GGG | 0.473124 | 3_1:-37126008 | None:intergenic |
| TTAGAAGGGACTGAAACATT+AGG | 0.479469 | 3_1:+37124050 | Msa0356870:CDS |
| GATTCATTTGTAGGCTTCTG+AGG | 0.480823 | 3_1:+37122201 | Msa0356870:intron |
| ATCCTTAAAAGGGCGGGTGG+CGG | 0.480854 | 3_1:+37120729 | Msa0356870:CDS |
| TGCAGTTCAGTTAACTCATA+GGG | 0.484553 | 3_1:+37121553 | Msa0356870:CDS |
| TTCATCAACTATCACTCATA+AGG | 0.485027 | 3_1:-37127426 | None:intergenic |
| ATGAGAATGAAGCTTTGTAA+AGG | 0.488741 | 3_1:+37126698 | Msa0356870:CDS |
| TAGTAAATTTGAGAAGGGTT+TGG | 0.490035 | 3_1:+37120499 | Msa0356870:CDS |
| ATCCATTCATATACTTAATG+TGG | 0.494470 | 3_1:+37126670 | Msa0356870:CDS |
| GAGTACAATTATGGAGTTGG+TGG | 0.495107 | 3_1:+37127455 | Msa0356870:three_prime_UTR |
| GCACCTCAAGGCTCAAACAC+TGG | 0.496627 | 3_1:-37127487 | None:intergenic |
| CTCATTTATATGAATTAGAA+GGG | 0.497583 | 3_1:+37124036 | Msa0356870:CDS |
| AGAGAATGCCGCCCCAGTCC+TGG | 0.498801 | 3_1:-37119962 | None:intergenic |
| TGGATCTAATAATCAGATCA+TGG | 0.501525 | 3_1:+37120382 | Msa0356870:CDS |
| TAATTGCAGATTGTTCTAGC+TGG | 0.505097 | 3_1:+37127201 | Msa0356870:intron |
| CAAGTTTGTATTATTTCAGA+AGG | 0.506009 | 3_1:+37126039 | Msa0356870:CDS |
| CACATGTAATACAACAAAAG+AGG | 0.507686 | 3_1:-37127298 | None:intergenic |
| ATTCTATTCGAGTTCAATGC+AGG | 0.509177 | 3_1:+37126742 | Msa0356870:CDS |
| AGCAGTTCAAAGAGTGGAGG+AGG | 0.517740 | 3_1:+37122288 | Msa0356870:CDS |
| CAAGTCCATCATGTTTCTGA+AGG | 0.520285 | 3_1:-37127240 | None:intergenic |
| AATATGCGTCCAACGTCAAA+AGG | 0.523688 | 3_1:-37126015 | None:intergenic |
| CTTGCTAGTAAATTTGAGAA+GGG | 0.528068 | 3_1:+37120494 | Msa0356870:CDS |
| TTTCAGAATGTTCAATTCAG+TGG | 0.532345 | 3_1:+37124117 | Msa0356870:CDS |
| CCCGAAAGTGCTATCGATGA+AGG | 0.534861 | 3_1:+37120409 | Msa0356870:CDS |
| GTCTCAAACTTCAGGAAACC+AGG | 0.541401 | 3_1:+37122333 | Msa0356870:CDS |
| CCTTGCTAGTAAATTTGAGA+AGG | 0.543952 | 3_1:+37120493 | Msa0356870:CDS |
| AAACTCCTTCAGAAACATGA+TGG | 0.544547 | 3_1:+37127235 | Msa0356870:CDS |
| GGACTTGGAACAATTAATGA+AGG | 0.548634 | 3_1:+37123111 | Msa0356870:intron |
| CCTTCTCAAATTTACTAGCA+AGG | 0.554709 | 3_1:-37120493 | None:intergenic |
| TTCAGTTAACTCATAGGGAA+GGG | 0.556887 | 3_1:+37121558 | Msa0356870:CDS |
| ATGGGTTGGAATCCTTAAAA+GGG | 0.558486 | 3_1:+37120719 | Msa0356870:CDS |
| CAAGGCTCAAACACTGGACA+TGG | 0.560433 | 3_1:-37127481 | None:intergenic |
| CAGTTGGCAAGGGAAAAGAA+AGG | 0.562244 | 3_1:+37123999 | Msa0356870:intron |
| TGCTGCTAAGTTGTCTGAAG+AGG | 0.562336 | 3_1:+37120526 | Msa0356870:CDS |
| TCCATTCATATACTTAATGT+GGG | 0.569079 | 3_1:+37126671 | Msa0356870:CDS |
| CAAACCTGGTTCAATTGGAC+CGG | 0.569962 | 3_1:-37126085 | None:intergenic |
| ACGCGAAACTGCACAGCTGT+TGG | 0.571348 | 3_1:+37120442 | Msa0356870:CDS |
| ACCTGGTTCAATTGGACCGG+TGG | 0.575977 | 3_1:-37126082 | None:intergenic |
| AACCATCAATTAGCACCTCA+AGG | 0.578304 | 3_1:-37127499 | None:intergenic |
| CCTTCTAATTCATATAAATG+AGG | 0.579496 | 3_1:-37124035 | None:intergenic |
| GGCAGCAGTTCAAAGAGTGG+AGG | 0.581141 | 3_1:+37122285 | Msa0356870:CDS |
| TGTCCAGTGTTTGAGCCTTG+AGG | 0.582661 | 3_1:+37127484 | Msa0356870:three_prime_UTR |
| CATAGTGTCACCAAAACTGC+GGG | 0.582763 | 3_1:-37120291 | None:intergenic |
| ATTAATGAAGGAGGTTCAAG+AGG | 0.588663 | 3_1:+37123123 | Msa0356870:CDS |
| TTGAGGGACCAGGACTGGGG+CGG | 0.588773 | 3_1:+37119954 | None:intergenic |
| GTTCAGTTAACTCATAGGGA+AGG | 0.590453 | 3_1:+37121557 | Msa0356870:CDS |
| TCAGTTAACTCATAGGGAAG+GGG | 0.591057 | 3_1:+37121559 | Msa0356870:CDS |
| ATGATGAGAGATACCTTGCT+TGG | 0.592908 | 3_1:-37123172 | None:intergenic |
| ATGATGTGAATCATTTGTCT+GGG | 0.597530 | 3_1:-37126639 | None:intergenic |
| GTTGGAATCCTTAAAAGGGC+GGG | 0.598527 | 3_1:+37120723 | Msa0356870:CDS |
| ACATGTAATACAACAAAAGA+GGG | 0.599840 | 3_1:-37127297 | None:intergenic |
| GGCAAGGGAAAAGAAAGGAG+AGG | 0.600428 | 3_1:+37124004 | Msa0356870:CDS |
| CAGCTTTGTGGAGTTCGAGG+AGG | 0.602632 | 3_1:+37126934 | Msa0356870:intron |
| ATGCAGCTATCATGCTTGCA+AGG | 0.603055 | 3_1:+37127043 | Msa0356870:CDS |
| TGAGATTGTATGATGAGAAG+TGG | 0.603250 | 3_1:-37120091 | None:intergenic |
| TTTGTGGAGTTCGAGGAGGT+GGG | 0.607486 | 3_1:+37126938 | Msa0356870:CDS |
| CTTGGAACAATTAATGAAGG+AGG | 0.607672 | 3_1:+37123114 | Msa0356870:CDS |
| AGCAGAAAGAGAGAGAGTGT+AGG | 0.610026 | 3_1:-37120037 | None:intergenic |
| ACCACCGGTCCAATTGAACC+AGG | 0.610618 | 3_1:+37126081 | Msa0356870:CDS |
| TGACACTATGATGATGCATA+AGG | 0.614210 | 3_1:+37120304 | Msa0356870:CDS |
| AGGGGAGCTAGTACAACAGA+AGG | 0.616255 | 3_1:+37121577 | Msa0356870:CDS |
| AATTTAGTTAGACACCAAGA+AGG | 0.620369 | 3_1:-37120061 | None:intergenic |
| CAGATCACACTGTCAACCAC+CGG | 0.621680 | 3_1:+37126066 | Msa0356870:CDS |
| ATGAGTTAACTGAACTGCAA+GGG | 0.627954 | 3_1:-37121549 | None:intergenic |
| CAGTTGAGGGACCAGGACTG+GGG | 0.630313 | 3_1:+37119951 | None:intergenic |
| GCTAGTACAACAGAAGGCTG+AGG | 0.635371 | 3_1:+37121583 | Msa0356870:CDS |
| TTGAACATTCTGAAAGTTCG+GGG | 0.637142 | 3_1:-37124109 | None:intergenic |
| TATGAGTTAACTGAACTGCA+AGG | 0.638190 | 3_1:-37121550 | None:intergenic |
| AATGCTGCATCAGCCAAGCA+AGG | 0.639243 | 3_1:+37123159 | Msa0356870:CDS |
| TCGAGGAGGTGGGAATGCTG+CGG | 0.640974 | 3_1:+37126948 | Msa0356870:CDS |
| CCGGGCAGCAGTTCAAAGAG+TGG | 0.642685 | 3_1:+37122282 | Msa0356870:CDS |
| TCCAACGTCAAAAGGTTCTG+GGG | 0.650573 | 3_1:-37126007 | None:intergenic |
| ATAAAGGAATTCAGACCACA+AGG | 0.657475 | 3_1:-37127364 | None:intergenic |
| GGTTGGAATCCTTAAAAGGG+CGG | 0.659287 | 3_1:+37120722 | Msa0356870:CDS |
| TGAACATTCTGAAAGTTCGG+GGG | 0.661686 | 3_1:-37124108 | None:intergenic |
| GGAATCCTTAAAAGGGCGGG+TGG | 0.666667 | 3_1:+37120726 | Msa0356870:CDS |
| CAGCTATCATGCTTGCAAGG+AGG | 0.667212 | 3_1:+37127046 | Msa0356870:CDS |
| TATGATGATGCATAAGGACG+TGG | 0.671817 | 3_1:+37120310 | Msa0356870:CDS |
| TGGTTTGGGAAACTATGTAG+AGG | 0.678930 | 3_1:+37126279 | Msa0356870:CDS |
| TCATAGTGTCACCAAAACTG+CGG | 0.680285 | 3_1:-37120292 | None:intergenic |
| GAAAGTGCTATCGATGAAGG+AGG | 0.682437 | 3_1:+37120412 | Msa0356870:CDS |
| TGCTATGGAATCATACCTTG+TGG | 0.686461 | 3_1:+37127349 | Msa0356870:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAATAATTTATAGAATTTT+AGG | + | chr3_1:37125033-37125052 | Msa0356870:intron | 10.0% |
| !! | TAATTCTTTATAAATAAAGA+AGG | - | chr3_1:37125828-37125847 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+AGG | + | chr3_1:37124516-37124535 | Msa0356870:intron | 100.0% |
| !!! | AATCATTGATTATTTCAATT+TGG | - | chr3_1:37120589-37120608 | None:intergenic | 15.0% |
| !!! | AATGATTATAATAATTTGCA+AGG | + | chr3_1:37120602-37120621 | Msa0356870:intron | 15.0% |
| !! | ACAATACTTCAATTATTTAT+CGG | - | chr3_1:37121795-37121814 | None:intergenic | 15.0% |
| !!! | GAAAAATTCATTTCTTTTTA+CGG | + | chr3_1:37122793-37122812 | Msa0356870:intron | 15.0% |
| !!! | TTTAATAAAATTTAGTTCTG+TGG | + | chr3_1:37123080-37123099 | Msa0356870:intron | 15.0% |
| !!! | TTAATAAAATTTAGTTCTGT+GGG | + | chr3_1:37123081-37123100 | Msa0356870:intron | 15.0% |
| !! | AAAACAGAAAGAAAAAAAAA+AGG | - | chr3_1:37123343-37123362 | None:intergenic | 15.0% |
| !! | TCATAAACAATAAACAAATA+TGG | - | chr3_1:37123408-37123427 | None:intergenic | 15.0% |
| !!! | ACTTTTTTATCATTATTTTG+AGG | + | chr3_1:37123698-37123717 | Msa0356870:intron | 15.0% |
| !! | TTAAAAACAGTATTTATAAC+AGG | - | chr3_1:37126814-37126833 | None:intergenic | 15.0% |
| !!! | AATACTGTTTTTAACATTTT+CGG | + | chr3_1:37126820-37126839 | Msa0356870:intron | 15.0% |
| !!! | AATAGTTTTGCTTTTTTGAA+AGG | - | chr3_1:37120003-37120022 | None:intergenic | 20.0% |
| !! | TTATTTCAATTTGGAAAGTT+AGG | - | chr3_1:37120580-37120599 | None:intergenic | 20.0% |
| !! | ATTTCAAAGAACTTGTAATT+AGG | + | chr3_1:37121233-37121252 | Msa0356870:intron | 20.0% |
| !! | TTTCAAAGAACTTGTAATTA+GGG | + | chr3_1:37121234-37121253 | Msa0356870:intron | 20.0% |
| !! | CAATACTTCAATTATTTATC+GGG | - | chr3_1:37121794-37121813 | None:intergenic | 20.0% |
| !! | GAAAGAAAGAATTGAATAAT+CGG | + | chr3_1:37121904-37121923 | Msa0356870:intron | 20.0% |
| !! | AACGTAATGATCAAATAAAA+AGG | - | chr3_1:37122071-37122090 | None:intergenic | 20.0% |
| !! | TTTAATTCCTATTTGTGAAA+TGG | + | chr3_1:37122107-37122126 | Msa0356870:intron | 20.0% |
| !!! | TGATTAAATTTTACGGAAAA+AGG | - | chr3_1:37122820-37122839 | None:intergenic | 20.0% |
| !! | AAATATCAATTGATACATCA+CGG | - | chr3_1:37123027-37123046 | None:intergenic | 20.0% |
| !!! | TTCTTTCTGTTTTTTTGTTA+AGG | + | chr3_1:37123350-37123369 | Msa0356870:intron | 20.0% |
| !! | AGGGAAAAATATTATGATTA+TGG | + | chr3_1:37123576-37123595 | Msa0356870:intron | 20.0% |
| !! | CTCATTTATATGAATTAGAA+GGG | + | chr3_1:37124036-37124055 | Msa0356870:CDS | 20.0% |
| !!! | TTTGTTAATTTTCTCATTCT+GGG | - | chr3_1:37124361-37124380 | None:intergenic | 20.0% |
| !!! | TTTTGTTAATTTTCTCATTC+TGG | - | chr3_1:37124362-37124381 | None:intergenic | 20.0% |
| !!! | ACAAAATATCATTTTAGAAG+AGG | + | chr3_1:37124376-37124395 | Msa0356870:intron | 20.0% |
| !!! | CAAAATATCATTTTAGAAGA+GGG | + | chr3_1:37124377-37124396 | Msa0356870:intron | 20.0% |
| !! | AAAATCGAGAAAAAGTAATT+AGG | + | chr3_1:37124400-37124419 | Msa0356870:intron | 20.0% |
| !!! | TCTCTTTTTATAAACTAGAA+GGG | - | chr3_1:37124439-37124458 | None:intergenic | 20.0% |
| !!! | TTCTCTTTTTATAAACTAGA+AGG | - | chr3_1:37124440-37124459 | None:intergenic | 20.0% |
| !!! | AATTTTAGGAAACAAATGAT+AGG | + | chr3_1:37125047-37125066 | Msa0356870:intron | 20.0% |
| !!! | ATTTTAGGAAACAAATGATA+GGG | + | chr3_1:37125048-37125067 | Msa0356870:intron | 20.0% |
| !! | AAAAATAAATTACCCTAGTA+AGG | + | chr3_1:37125684-37125703 | Msa0356870:intron | 20.0% |
| !! | ATTGATGTTATATCATTATC+AGG | + | chr3_1:37125908-37125927 | Msa0356870:intron | 20.0% |
| !!! | ACAATCCTTTTAAATTTGTT+TGG | + | chr3_1:37126344-37126363 | Msa0356870:intron | 20.0% |
| !! | AAAGACCAAACAAATTTAAA+AGG | - | chr3_1:37126352-37126371 | None:intergenic | 20.0% |
| !! | TTGGTGAAAGAAAAATATAA+AGG | - | chr3_1:37127383-37127402 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAGGAAAAAGAGA+AGG | - | chr3_1:37119991-37120010 | None:intergenic | 25.0% |
| ! | TTACAGATTATGAGTAGTTA+AGG | - | chr3_1:37120118-37120137 | None:intergenic | 25.0% |
| ! | AAAAGAAGAAGAAAAGACAA+AGG | - | chr3_1:37120147-37120166 | None:intergenic | 25.0% |
| ! | TTAGATCCAATTTGATAAGT+AGG | - | chr3_1:37120371-37120390 | None:intergenic | 25.0% |
| ! | ATGTCTATATTGTTTGATTG+TGG | + | chr3_1:37120631-37120650 | Msa0356870:intron | 25.0% |
| ! | TGTCTATATTGTTTGATTGT+GGG | + | chr3_1:37120632-37120651 | Msa0356870:intron | 25.0% |
| !!! | TTTTAAAGAAGATCAGAGAT+GGG | + | chr3_1:37120701-37120720 | Msa0356870:CDS | 25.0% |
| !!! | GTTTTAGCAAAAAGCATTTT+AGG | + | chr3_1:37121121-37121140 | Msa0356870:intron | 25.0% |
| !!! | AAAAGCATTTTAGGTGATTA+CGG | + | chr3_1:37121130-37121149 | Msa0356870:intron | 25.0% |
| ! | TTCAAAGAACTTGTAATTAG+GGG | + | chr3_1:37121235-37121254 | Msa0356870:intron | 25.0% |
| !! | AAGTCTTTGAGAATGAATAA+TGG | + | chr3_1:37121348-37121367 | Msa0356870:intron | 25.0% |
| !! | AGTCTTTGAGAATGAATAAT+GGG | + | chr3_1:37121349-37121368 | Msa0356870:intron | 25.0% |
| !!! | AACTTCTTCAATCTCTTTTT+TGG | + | chr3_1:37121643-37121662 | Msa0356870:intron | 25.0% |
| ! | ATAGGAATTAAACATTGAGA+GGG | - | chr3_1:37121748-37121767 | None:intergenic | 25.0% |
| ! | AATAGGAATTAAACATTGAG+AGG | - | chr3_1:37121749-37121768 | None:intergenic | 25.0% |
| ! | ATTACACAGTTCTTTCAAAT+AGG | - | chr3_1:37121766-37121785 | None:intergenic | 25.0% |
| ! | AAAGAATCCATTTCACAAAT+AGG | - | chr3_1:37122117-37122136 | None:intergenic | 25.0% |
| ! | ATCCTTCAAAGTTAAAAGTT+GGG | - | chr3_1:37122390-37122409 | None:intergenic | 25.0% |
| ! | AATCCTTCAAAGTTAAAAGT+TGG | - | chr3_1:37122391-37122410 | None:intergenic | 25.0% |
| !!! | ACTTTTAACTTTGAAGGATT+AGG | + | chr3_1:37122391-37122410 | Msa0356870:intron | 25.0% |
| ! | TTTCGAAACTGATCAATTAA+TGG | + | chr3_1:37122467-37122486 | Msa0356870:intron | 25.0% |
| ! | ATTAATGGAATGAGAAATTG+TGG | + | chr3_1:37122482-37122501 | Msa0356870:intron | 25.0% |
| ! | TGTCTTGAAATAATTCTGTT+GGG | + | chr3_1:37122613-37122632 | Msa0356870:intron | 25.0% |
| ! | AAAAGAAACAAGCAAAAATC+TGG | - | chr3_1:37122690-37122709 | None:intergenic | 25.0% |
| ! | TAAATTTGTGGAGAAATTTG+TGG | + | chr3_1:37122764-37122783 | Msa0356870:intron | 25.0% |
| !! | TAATCATTTTATTGCTTCTC+TGG | + | chr3_1:37122834-37122853 | Msa0356870:intron | 25.0% |
| ! | CTCTTCAATAATCAAAATAC+TGG | + | chr3_1:37122965-37122984 | Msa0356870:intron | 25.0% |
| ! | TTACTATTGAAAGATATCAG+CGG | - | chr3_1:37123488-37123507 | None:intergenic | 25.0% |
| !!! | TTGATTTCTGATTGACTTTT+AGG | + | chr3_1:37123733-37123752 | Msa0356870:intron | 25.0% |
| ! | ACGTTTCTTTGATTAAATTG+AGG | + | chr3_1:37123919-37123938 | Msa0356870:intron | 25.0% |
| ! | AAATCAGTGATAACTTAGAA+TGG | - | chr3_1:37123962-37123981 | None:intergenic | 25.0% |
| ! | CCTTCTAATTCATATAAATG+AGG | - | chr3_1:37124038-37124057 | None:intergenic | 25.0% |
| ! | CCTCATTTATATGAATTAGA+AGG | + | chr3_1:37124035-37124054 | Msa0356870:CDS | 25.0% |
| !! | AATTGAACATTCTGAAAGTT+CGG | - | chr3_1:37124114-37124133 | None:intergenic | 25.0% |
| !!! | GTTTCTATTTTGCTTTTCAA+GGG | + | chr3_1:37124232-37124251 | Msa0356870:intron | 25.0% |
| ! | AGAAAGAAACCAAGAATATA+GGG | + | chr3_1:37124456-37124475 | Msa0356870:intron | 25.0% |
| ! | AAGAATATAGGGGATATTAA+GGG | + | chr3_1:37124467-37124486 | Msa0356870:intron | 25.0% |
| ! | AGGATATCAGAAAGTTTATA+AGG | + | chr3_1:37124723-37124742 | Msa0356870:intron | 25.0% |
| ! | GGATATCAGAAAGTTTATAA+GGG | + | chr3_1:37124724-37124743 | Msa0356870:intron | 25.0% |
| ! | AAAGTTTATAAGGGAATTCT+TGG | + | chr3_1:37124733-37124752 | Msa0356870:intron | 25.0% |
| ! | CGTTACTAGATGATTTAAAA+TGG | - | chr3_1:37124826-37124845 | None:intergenic | 25.0% |
| ! | CATAACAATTTCTGTTTGTA+AGG | + | chr3_1:37124856-37124875 | Msa0356870:intron | 25.0% |
| !!! | GTATTTCTTCTACCTTTTTT+TGG | + | chr3_1:37124929-37124948 | Msa0356870:intron | 25.0% |
| !! | TAATGTTTGGAACCAAAAAA+AGG | - | chr3_1:37124944-37124963 | None:intergenic | 25.0% |
| ! | TCCAATTATATCTTTAGATG+CGG | - | chr3_1:37125268-37125287 | None:intergenic | 25.0% |
| ! | AGTTATACTTTGTGTCATAT+CGG | + | chr3_1:37125309-37125328 | Msa0356870:intron | 25.0% |
| ! | TTCAAGGTATATATTCCATT+CGG | - | chr3_1:37125353-37125372 | None:intergenic | 25.0% |
| !! | TGATAATTGACTCTGTTTAA+GGG | - | chr3_1:37125532-37125551 | None:intergenic | 25.0% |
| !! | ATGATAATTGACTCTGTTTA+AGG | - | chr3_1:37125533-37125552 | None:intergenic | 25.0% |
| ! | ATACTTGTAAGTTCATGAAT+AGG | - | chr3_1:37125603-37125622 | None:intergenic | 25.0% |
| ! | TACATATTTGTGCAAGTTAA+TGG | - | chr3_1:37125872-37125891 | None:intergenic | 25.0% |
| !! | TAACTTGCACAAATATGTAA+AGG | + | chr3_1:37125873-37125892 | Msa0356870:intron | 25.0% |
| ! | ACAAAAACGTGTTACATAAA+AGG | - | chr3_1:37125958-37125977 | None:intergenic | 25.0% |
| ! | CAAGTTTGTATTATTTCAGA+AGG | + | chr3_1:37126039-37126058 | Msa0356870:CDS | 25.0% |
| ! | TATTAAGTAGTCAACAAGAA+TGG | + | chr3_1:37126134-37126153 | Msa0356870:intron | 25.0% |
| ! | CAAATTATAAGAGGGAAAAA+AGG | - | chr3_1:37126375-37126394 | None:intergenic | 25.0% |
| !! | TGCTTTTGCAAATTATAAGA+GGG | - | chr3_1:37126383-37126402 | None:intergenic | 25.0% |
| !! | ATGCTTTTGCAAATTATAAG+AGG | - | chr3_1:37126384-37126403 | None:intergenic | 25.0% |
| ! | TTGAAGGTTTATTATAAGCA+TGG | - | chr3_1:37126487-37126506 | None:intergenic | 25.0% |
| ! | AGTTATATTCAATACTTTGC+AGG | + | chr3_1:37126607-37126626 | Msa0356870:intron | 25.0% |
| ! | ATCCATTCATATACTTAATG+TGG | + | chr3_1:37126670-37126689 | Msa0356870:CDS | 25.0% |
| ! | TCCATTCATATACTTAATGT+GGG | + | chr3_1:37126671-37126690 | Msa0356870:CDS | 25.0% |
| ! | AAACTAATGCCATATTTGTT+AGG | + | chr3_1:37127125-37127144 | Msa0356870:intron | 25.0% |
| ! | TGCTAAAATCCTAACAAATA+TGG | - | chr3_1:37127137-37127156 | None:intergenic | 25.0% |
| ! | ACATGTAATACAACAAAAGA+GGG | - | chr3_1:37127300-37127319 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTGTATTACATGT+GGG | + | chr3_1:37127300-37127319 | Msa0356870:three_prime_UTR | 25.0% |
| !! | GAAAGTTTAGAGTACAATTA+TGG | + | chr3_1:37127446-37127465 | Msa0356870:three_prime_UTR | 25.0% |
| AATTTAGTTAGACACCAAGA+AGG | - | chr3_1:37120064-37120083 | None:intergenic | 30.0% | |
| !! | TTCATTTTTGTGATTTGCAG+AGG | + | chr3_1:37120239-37120258 | Msa0356870:intron | 30.0% |
| CGATTTCCTACTTATCAAAT+TGG | + | chr3_1:37120362-37120381 | Msa0356870:CDS | 30.0% | |
| TGGATCTAATAATCAGATCA+TGG | + | chr3_1:37120382-37120401 | Msa0356870:CDS | 30.0% | |
| CTTGCTAGTAAATTTGAGAA+GGG | + | chr3_1:37120494-37120513 | Msa0356870:CDS | 30.0% | |
| TAGTAAATTTGAGAAGGGTT+TGG | + | chr3_1:37120499-37120518 | Msa0356870:CDS | 30.0% | |
| !! | CTTTTAAAGAAGATCAGAGA+TGG | + | chr3_1:37120700-37120719 | Msa0356870:CDS | 30.0% |
| ! | AGAGATTATCAAAGAAGCAT+AGG | - | chr3_1:37120806-37120825 | None:intergenic | 30.0% |
| ACTCTTTAACAATGACAATG+CGG | - | chr3_1:37120852-37120871 | None:intergenic | 30.0% | |
| TATCATGACTCTTAGAAATC+AGG | - | chr3_1:37120963-37120982 | None:intergenic | 30.0% | |
| ATGATAGTCTTTCTTGATTG+CGG | + | chr3_1:37120977-37120996 | Msa0356870:intron | 30.0% | |
| ! | GCTAACAAATTTTCTTAAGC+AGG | + | chr3_1:37121613-37121632 | Msa0356870:CDS | 30.0% |
| ACAATGACACTAATGTCAAA+AGG | + | chr3_1:37121715-37121734 | Msa0356870:intron | 30.0% | |
| ATAATACGCTTCTCAATTTG+CGG | - | chr3_1:37121876-37121895 | None:intergenic | 30.0% | |
| TAATCTGTCTATTGACCTAT+TGG | + | chr3_1:37122027-37122046 | Msa0356870:intron | 30.0% | |
| AATCTGTCTATTGACCTATT+GGG | + | chr3_1:37122028-37122047 | Msa0356870:intron | 30.0% | |
| CAACTCAAATCCTTTATACT+TGG | + | chr3_1:37122139-37122158 | Msa0356870:intron | 30.0% | |
| CTTTGTAAAGCCAAGTATAA+AGG | - | chr3_1:37122152-37122171 | None:intergenic | 30.0% | |
| ! | CAAAGAAATTTCCTTTTCCA+AGG | + | chr3_1:37122167-37122186 | Msa0356870:intron | 30.0% |
| GAGTATCTAGATTCATTTGT+AGG | + | chr3_1:37122192-37122211 | Msa0356870:intron | 30.0% | |
| TGCTAAGAAACTTGTATATG+AGG | + | chr3_1:37122225-37122244 | Msa0356870:CDS | 30.0% | |
| !!! | GTTTTGAAATAGATAATGCC+CGG | + | chr3_1:37122263-37122282 | Msa0356870:CDS | 30.0% |
| !!! | TTTTGAAATAGATAATGCCC+GGG | + | chr3_1:37122264-37122283 | Msa0356870:CDS | 30.0% |
| AAAAGGAAATACAATGAACC+TGG | - | chr3_1:37122354-37122373 | None:intergenic | 30.0% | |
| TGGGAAACATAAATGACAAA+AGG | - | chr3_1:37122371-37122390 | None:intergenic | 30.0% | |
| !!! | TTCCCAACTTTTAACTTTGA+AGG | + | chr3_1:37122385-37122404 | Msa0356870:intron | 30.0% |
| TTTCTACTTGTACTTCTGAA+TGG | + | chr3_1:37122531-37122550 | Msa0356870:intron | 30.0% | |
| CTGTCTTGAAATAATTCTGT+TGG | + | chr3_1:37122612-37122631 | Msa0356870:intron | 30.0% | |
| AAGTGCAAGATATTCTATGA+AGG | + | chr3_1:37123529-37123548 | Msa0356870:intron | 30.0% | |
| ! | TATTCTATGAAGGTGTAGAA+TGG | + | chr3_1:37123539-37123558 | Msa0356870:intron | 30.0% |
| !! | AAAGAAGGGTATTTCAACAA+AGG | - | chr3_1:37123639-37123658 | None:intergenic | 30.0% |
| ! | AAAGAAAGTAGTGGAAAGAA+GGG | - | chr3_1:37123653-37123672 | None:intergenic | 30.0% |
| !!! | TCTGATTGACTTTTAGGTTA+TGG | + | chr3_1:37123739-37123758 | Msa0356870:intron | 30.0% |
| !!! | TGACTTTTAGGTTATGGATA+TGG | + | chr3_1:37123745-37123764 | Msa0356870:intron | 30.0% |
| TTATATTCGACTCCAAAAAG+AGG | + | chr3_1:37123817-37123836 | Msa0356870:CDS | 30.0% | |
| TCAAAATGGCATAACATGAT+TGG | - | chr3_1:37123847-37123866 | None:intergenic | 30.0% | |
| ! | ATTGAACATTCTGAAAGTTC+GGG | - | chr3_1:37124113-37124132 | None:intergenic | 30.0% |
| TTTCAGAATGTTCAATTCAG+TGG | + | chr3_1:37124117-37124136 | Msa0356870:CDS | 30.0% | |
| !! | AAGTTCCTTTTTGGCATTTT+CGG | - | chr3_1:37124156-37124175 | None:intergenic | 30.0% |
| ! | ACCTGAAATAAGTTCCTTTT+TGG | - | chr3_1:37124165-37124184 | None:intergenic | 30.0% |
| !! | GGTTTCTATTTTGCTTTTCA+AGG | + | chr3_1:37124231-37124250 | Msa0356870:intron | 30.0% |
| !! | TTTCTACTTTTATCTACCTC+TGG | + | chr3_1:37124297-37124316 | Msa0356870:intron | 30.0% |
| GAGAAAGAAACCAAGAATAT+AGG | + | chr3_1:37124455-37124474 | Msa0356870:intron | 30.0% | |
| GAAAGAAACCAAGAATATAG+GGG | + | chr3_1:37124457-37124476 | Msa0356870:intron | 30.0% | |
| CTTAATATCCCCTATATTCT+TGG | - | chr3_1:37124468-37124487 | None:intergenic | 30.0% | |
| CAAGAATATAGGGGATATTA+AGG | + | chr3_1:37124466-37124485 | Msa0356870:intron | 30.0% | |
| AGAATATAGGGGATATTAAG+GGG | + | chr3_1:37124468-37124487 | Msa0356870:intron | 30.0% | |
| GACATGTATAATTGGTTGAA+GGG | + | chr3_1:37124496-37124515 | Msa0356870:intron | 30.0% | |
| ACATGTATAATTGGTTGAAG+GGG | + | chr3_1:37124497-37124516 | Msa0356870:intron | 30.0% | |
| AGAGATAACAGAAAAAGAAC+AGG | + | chr3_1:37124613-37124632 | Msa0356870:intron | 30.0% | |
| ! | TTATGTCTTATTCATCAGTC+AGG | + | chr3_1:37124990-37125009 | Msa0356870:intron | 30.0% |
| GATTCTCAAATGCTCAAAAA+CGG | + | chr3_1:37125172-37125191 | Msa0356870:intron | 30.0% | |
| ATTCTCAAATGCTCAAAAAC+GGG | + | chr3_1:37125173-37125192 | Msa0356870:intron | 30.0% | |
| CCAATTATATCTTTAGATGC+GGG | - | chr3_1:37125267-37125286 | None:intergenic | 30.0% | |
| GATATATAATTGCTCCAAAG+AGG | + | chr3_1:37125286-37125305 | Msa0356870:intron | 30.0% | |
| TTCGGCTAATTCAAAGAATT+TGG | - | chr3_1:37125335-37125354 | None:intergenic | 30.0% | |
| AATTCTTTGAATTAGCCGAA+TGG | + | chr3_1:37125335-37125354 | Msa0356870:intron | 30.0% | |
| CTTTACATGTTCACTTTGTT+TGG | + | chr3_1:37125627-37125646 | Msa0356870:intron | 30.0% | |
| GTTTGGCATAGATTGTAATA+CGG | + | chr3_1:37125644-37125663 | Msa0356870:intron | 30.0% | |
| !!! | GGGTAATTTATTTTTGAAGC+AGG | - | chr3_1:37125679-37125698 | None:intergenic | 30.0% |
| CTGATTTACTATCCTTACTA+GGG | - | chr3_1:37125699-37125718 | None:intergenic | 30.0% | |
| TCTGATTTACTATCCTTACT+AGG | - | chr3_1:37125700-37125719 | None:intergenic | 30.0% | |
| AACGTGTTACATAAAAGGAA+AGG | - | chr3_1:37125953-37125972 | None:intergenic | 30.0% | |
| GTCTTGTCAATTCAAAGAAA+TGG | + | chr3_1:37126196-37126215 | Msa0356870:intron | 30.0% | |
| !! | TTTTATTTGTTTTCAGCTGC+TGG | + | chr3_1:37126259-37126278 | Msa0356870:intron | 30.0% |
| AGGTTTATTATAAGCATGGA+TGG | - | chr3_1:37126483-37126502 | None:intergenic | 30.0% | |
| CAAAACTAGACACTAATTGA+AGG | - | chr3_1:37126503-37126522 | None:intergenic | 30.0% | |
| !! | CTTCAATTAGTGTCTAGTTT+TGG | + | chr3_1:37126501-37126520 | Msa0356870:intron | 30.0% |
| ATTACTATTGTCACTGAATC+TGG | - | chr3_1:37126587-37126606 | None:intergenic | 30.0% | |
| TATATTCAATACTTTGCAGG+TGG | + | chr3_1:37126610-37126629 | Msa0356870:intron | 30.0% | |
| ATGATGTGAATCATTTGTCT+GGG | - | chr3_1:37126642-37126661 | None:intergenic | 30.0% | |
| ! | AGTATATGAATGGATTCAGT+TGG | - | chr3_1:37126665-37126684 | None:intergenic | 30.0% |
| TCCCACATTAAGTATATGAA+TGG | - | chr3_1:37126675-37126694 | None:intergenic | 30.0% | |
| ! | ATGAGAATGAAGCTTTGTAA+AGG | + | chr3_1:37126698-37126717 | Msa0356870:CDS | 30.0% |
| ! | TGAGAATGAAGCTTTGTAAA+GGG | + | chr3_1:37126699-37126718 | Msa0356870:CDS | 30.0% |
| TGAACTCGAATAGAATTCTT+TGG | - | chr3_1:37126738-37126757 | None:intergenic | 30.0% | |
| !!! | ACTGTTTTTAACATTTTCGG+TGG | + | chr3_1:37126823-37126842 | Msa0356870:intron | 30.0% |
| !! | AGGTATTGGAAATTTAGCAA+TGG | - | chr3_1:37127181-37127200 | None:intergenic | 30.0% |
| ACAATCTGCAATTAAGGTAT+TGG | - | chr3_1:37127195-37127214 | None:intergenic | 30.0% | |
| CACATGTAATACAACAAAAG+AGG | - | chr3_1:37127301-37127320 | None:intergenic | 30.0% | |
| !! | CTCTTTTGTTGTATTACATG+TGG | + | chr3_1:37127299-37127318 | Msa0356870:three_prime_UTR | 30.0% |
| ! | TATGCCTTTTTATTGTGCTA+TGG | + | chr3_1:37127334-37127353 | Msa0356870:three_prime_UTR | 30.0% |
| GATTCCATAGCACAATAAAA+AGG | - | chr3_1:37127341-37127360 | None:intergenic | 30.0% | |
| ! | ATTTTTCTTTCACCAACAGT+AGG | + | chr3_1:37127387-37127406 | Msa0356870:three_prime_UTR | 30.0% |
| ! | TTTTTCTTTCACCAACAGTA+GGG | + | chr3_1:37127388-37127407 | Msa0356870:three_prime_UTR | 30.0% |
| TTCATCAACTATCACTCATA+AGG | - | chr3_1:37127429-37127448 | None:intergenic | 30.0% | |
| TTAGAGTACAATTATGGAGT+TGG | + | chr3_1:37127452-37127471 | Msa0356870:three_prime_UTR | 30.0% | |
| TGAGATTGTATGATGAGAAG+TGG | - | chr3_1:37120094-37120113 | None:intergenic | 35.0% | |
| ATACTTCGCGAAAAATGACA+AGG | + | chr3_1:37120264-37120283 | Msa0356870:exon | 35.0% | |
| ! | TGACACTATGATGATGCATA+AGG | + | chr3_1:37120304-37120323 | Msa0356870:CDS | 35.0% |
| CCTTCTCAAATTTACTAGCA+AGG | - | chr3_1:37120496-37120515 | None:intergenic | 35.0% | |
| CCTTGCTAGTAAATTTGAGA+AGG | + | chr3_1:37120493-37120512 | Msa0356870:CDS | 35.0% | |
| ATTGTTTGATTGTGGGATTC+AGG | + | chr3_1:37120639-37120658 | Msa0356870:intron | 35.0% | |
| !! | ATGGGTTGGAATCCTTAAAA+GGG | + | chr3_1:37120719-37120738 | Msa0356870:CDS | 35.0% |
| !! | TGTACACGAAGCTATTTCTT+TGG | + | chr3_1:37120768-37120787 | Msa0356870:CDS | 35.0% |
| AACAAATACTCACACATTGC+AGG | - | chr3_1:37120829-37120848 | None:intergenic | 35.0% | |
| TGACTCTTAGAAATCAGGTT+GGG | - | chr3_1:37120958-37120977 | None:intergenic | 35.0% | |
| ATGACTCTTAGAAATCAGGT+TGG | - | chr3_1:37120959-37120978 | None:intergenic | 35.0% | |
| TTTCTTGATTGCGGTATATC+TGG | + | chr3_1:37120986-37121005 | Msa0356870:intron | 35.0% | |
| ! | AACATGGAGTTGGTTGTAAA+GGG | - | chr3_1:37121023-37121042 | None:intergenic | 35.0% |
| AAAGAACTTGTAATTAGGGG+TGG | + | chr3_1:37121238-37121257 | Msa0356870:intron | 35.0% | |
| AAGAACTTGTAATTAGGGGT+GGG | + | chr3_1:37121239-37121258 | Msa0356870:intron | 35.0% | |
| ATGGAGACAGAGTAGAATTA+TGG | + | chr3_1:37121297-37121316 | Msa0356870:intron | 35.0% | |
| TGGAGACAGAGTAGAATTAT+GGG | + | chr3_1:37121298-37121317 | Msa0356870:intron | 35.0% | |
| AGAGTAGAATTATGGGAGAA+TGG | + | chr3_1:37121305-37121324 | Msa0356870:intron | 35.0% | |
| ATGAGTTAACTGAACTGCAA+GGG | - | chr3_1:37121552-37121571 | None:intergenic | 35.0% | |
| TATGAGTTAACTGAACTGCA+AGG | - | chr3_1:37121553-37121572 | None:intergenic | 35.0% | |
| TTGCAGTTCAGTTAACTCAT+AGG | + | chr3_1:37121552-37121571 | Msa0356870:CDS | 35.0% | |
| TGCAGTTCAGTTAACTCATA+GGG | + | chr3_1:37121553-37121572 | Msa0356870:CDS | 35.0% | |
| TTCAGTTAACTCATAGGGAA+GGG | + | chr3_1:37121558-37121577 | Msa0356870:CDS | 35.0% | |
| GAATTAAACATTGAGAGGGT+TGG | - | chr3_1:37121744-37121763 | None:intergenic | 35.0% | |
| CAAAAATTAGACAGCCCAAT+AGG | - | chr3_1:37122045-37122064 | None:intergenic | 35.0% | |
| ! | GGATCTTCCTTTTGACATAA+TGG | + | chr3_1:37122412-37122431 | Msa0356870:intron | 35.0% |
| ACACTTGCCATTATGTCAAA+AGG | - | chr3_1:37122422-37122441 | None:intergenic | 35.0% | |
| TTGTACTTCTGAATGGTTCA+TGG | + | chr3_1:37122538-37122557 | Msa0356870:intron | 35.0% | |
| ATATTTCCATCTAACTACGC+AGG | + | chr3_1:37122564-37122583 | Msa0356870:intron | 35.0% | |
| TTTCAAACCAAAGGAGAAAG+TGG | - | chr3_1:37122656-37122675 | None:intergenic | 35.0% | |
| GATCATGCGACATAAATTTG+TGG | + | chr3_1:37122752-37122771 | Msa0356870:intron | 35.0% | |
| GGACTTGGAACAATTAATGA+AGG | + | chr3_1:37123111-37123130 | Msa0356870:intron | 35.0% | |
| CTTGGAACAATTAATGAAGG+AGG | + | chr3_1:37123114-37123133 | Msa0356870:CDS | 35.0% | |
| ATTAATGAAGGAGGTTCAAG+AGG | + | chr3_1:37123123-37123142 | Msa0356870:CDS | 35.0% | |
| AACTACAACCACAAACAAGA+GGG | - | chr3_1:37123223-37123242 | None:intergenic | 35.0% | |
| TCTTTGGTTGTGAAATCGTT+AGG | + | chr3_1:37123258-37123277 | Msa0356870:intron | 35.0% | |
| CAAATATGGCACTATTGTGA+GGG | - | chr3_1:37123394-37123413 | None:intergenic | 35.0% | |
| ACAAATATGGCACTATTGTG+AGG | - | chr3_1:37123395-37123414 | None:intergenic | 35.0% | |
| ! | AATGGATTCAGAGCATTTCA+GGG | + | chr3_1:37123557-37123576 | Msa0356870:intron | 35.0% |
| ! | CAAAGAAAGTAGTGGAAAGA+AGG | - | chr3_1:37123654-37123673 | None:intergenic | 35.0% |
| ! | ATGATTGGCATACCTCTTTT+TGG | - | chr3_1:37123832-37123851 | None:intergenic | 35.0% |
| !!! | CATGTTATGCCATTTTGAAG+AGG | + | chr3_1:37123849-37123868 | Msa0356870:intron | 35.0% |
| CAATCACAACCTCTTCAAAA+TGG | - | chr3_1:37123861-37123880 | None:intergenic | 35.0% | |
| !! | CTTCCATTTCACTTTTCAGT+TGG | + | chr3_1:37123983-37124002 | Msa0356870:intron | 35.0% |
| TTGCCAACTGAAAAGTGAAA+TGG | - | chr3_1:37123989-37124008 | None:intergenic | 35.0% | |
| !! | ATTTCACTTTTCAGTTGGCA+AGG | + | chr3_1:37123988-37124007 | Msa0356870:intron | 35.0% |
| !! | TTTCACTTTTCAGTTGGCAA+GGG | + | chr3_1:37123989-37124008 | Msa0356870:intron | 35.0% |
| TTAGAAGGGACTGAAACATT+AGG | + | chr3_1:37124050-37124069 | Msa0356870:CDS | 35.0% | |
| ! | TTGAACATTCTGAAAGTTCG+GGG | - | chr3_1:37124112-37124131 | None:intergenic | 35.0% |
| !! | AGTTCCTTTTTGGCATTTTC+GGG | - | chr3_1:37124155-37124174 | None:intergenic | 35.0% |
| GCCAAAAAGGAACTTATTTC+AGG | + | chr3_1:37124161-37124180 | Msa0356870:CDS | 35.0% | |
| CAAAAAAATTGCACTGTGCT+GGG | + | chr3_1:37124193-37124212 | Msa0356870:intron | 35.0% | |
| TATCTACCTCTGGTATATTG+TGG | + | chr3_1:37124307-37124326 | Msa0356870:intron | 35.0% | |
| GGGACAAGTAAAATGAATGA+TGG | - | chr3_1:37124341-37124360 | None:intergenic | 35.0% | |
| GGACATGTATAATTGGTTGA+AGG | + | chr3_1:37124495-37124514 | Msa0356870:intron | 35.0% | |
| CATGTATAATTGGTTGAAGG+GGG | + | chr3_1:37124498-37124517 | Msa0356870:intron | 35.0% | |
| ATGTATAATTGGTTGAAGGG+GGG | + | chr3_1:37124499-37124518 | Msa0356870:intron | 35.0% | |
| GATAACAGAAAAAGAACAGG+TGG | + | chr3_1:37124616-37124635 | Msa0356870:intron | 35.0% | |
| AAGTGAGAAGGACTATATGA+AGG | + | chr3_1:37124685-37124704 | Msa0356870:intron | 35.0% | |
| AGTGAGAAGGACTATATGAA+GGG | + | chr3_1:37124686-37124705 | Msa0356870:intron | 35.0% | |
| TATAAGGGAATTCTTGGACT+AGG | + | chr3_1:37124739-37124758 | Msa0356870:intron | 35.0% | |
| ATATCTATGCACCAACTTGA+TGG | - | chr3_1:37125136-37125155 | None:intergenic | 35.0% | |
| GAGCATTTGAGAATCAAGTT+GGG | - | chr3_1:37125167-37125186 | None:intergenic | 35.0% | |
| TGAGCATTTGAGAATCAAGT+TGG | - | chr3_1:37125168-37125187 | None:intergenic | 35.0% | |
| ! | TGTTGACTAGAAGTCACAAA+AGG | + | chr3_1:37125230-37125249 | Msa0356870:intron | 35.0% |
| CCCGCATCTAAAGATATAAT+TGG | + | chr3_1:37125264-37125283 | Msa0356870:intron | 35.0% | |
| CACAAAGTATAACTCCTCTT+TGG | - | chr3_1:37125303-37125322 | None:intergenic | 35.0% | |
| ! | ATGGAATACTGGAAAGCATA+TGG | - | chr3_1:37125557-37125576 | None:intergenic | 35.0% |
| GTTCATGAATAGGTGAGATT+CGG | - | chr3_1:37125593-37125612 | None:intergenic | 35.0% | |
| AAAGATAGTCCAATCACTAG+AGG | + | chr3_1:37125722-37125741 | Msa0356870:intron | 35.0% | |
| ! | ATGTCTCCTATAGGTGTTTT+CGG | - | chr3_1:37125758-37125777 | None:intergenic | 35.0% |
| AACGTCATAATGTCTCCTAT+AGG | - | chr3_1:37125767-37125786 | None:intergenic | 35.0% | |
| ! | TAACACGTTTTTGTGTTCTC+AGG | + | chr3_1:37125964-37125983 | Msa0356870:intron | 35.0% |
| ACTTGATTGGACAGAAAAAC+AGG | - | chr3_1:37126223-37126242 | None:intergenic | 35.0% | |
| !! | TTTTCTGTCCAATCAAGTTG+AGG | + | chr3_1:37126225-37126244 | Msa0356870:intron | 35.0% |
| CAGTTTAACCTCAACTTGAT+TGG | - | chr3_1:37126236-37126255 | None:intergenic | 35.0% | |
| TCATCGCTTGTTCTTGTATA+TGG | + | chr3_1:37126455-37126474 | Msa0356870:intron | 35.0% | |
| GATGATGTGAATCATTTGTC+TGG | - | chr3_1:37126643-37126662 | None:intergenic | 35.0% | |
| ! | ATTCTATTCGAGTTCAATGC+AGG | + | chr3_1:37126742-37126761 | Msa0356870:CDS | 35.0% |
| GGGAGAGGAAAATATCAAAA+TGG | - | chr3_1:37126853-37126872 | None:intergenic | 35.0% | |
| !!! | TCTTGTTTTCTTCAGCTTTG+TGG | + | chr3_1:37126922-37126941 | Msa0356870:intron | 35.0% |
| CATTTGAATCAGAGAGAGAA+AGG | + | chr3_1:37127019-37127038 | Msa0356870:CDS | 35.0% | |
| GCTAGAACAATCTGCAATTA+AGG | - | chr3_1:37127201-37127220 | None:intergenic | 35.0% | |
| TAATTGCAGATTGTTCTAGC+TGG | + | chr3_1:37127201-37127220 | Msa0356870:intron | 35.0% | |
| AAACTCCTTCAGAAACATGA+TGG | + | chr3_1:37127235-37127254 | Msa0356870:CDS | 35.0% | |
| ATAAAGGAATTCAGACCACA+AGG | - | chr3_1:37127367-37127386 | None:intergenic | 35.0% | |
| CAAAAAAAATGCCCTACTGT+TGG | - | chr3_1:37127402-37127421 | None:intergenic | 35.0% | |
| TCATAGTGTCACCAAAACTG+CGG | - | chr3_1:37120295-37120314 | None:intergenic | 40.0% | |
| ! | TATGATGATGCATAAGGACG+TGG | + | chr3_1:37120310-37120329 | Msa0356870:CDS | 40.0% |
| TCCTTCATCGATAGCACTTT+CGG | - | chr3_1:37120413-37120432 | None:intergenic | 40.0% | |
| AAAGAAGATCAGAGATGGGT+TGG | + | chr3_1:37120705-37120724 | Msa0356870:CDS | 40.0% | |
| !! | GATGGGTTGGAATCCTTAAA+AGG | + | chr3_1:37120718-37120737 | Msa0356870:CDS | 40.0% |
| ACAAAAGATGGCCTGAACAT+GGG | + | chr3_1:37120888-37120907 | Msa0356870:intron | 40.0% | |
| ! | CAACATGGAGTTGGTTGTAA+AGG | - | chr3_1:37121024-37121043 | None:intergenic | 40.0% |
| TACAACCAACTCCATGTTGT+TGG | + | chr3_1:37121025-37121044 | Msa0356870:intron | 40.0% | |
| !! | AGGTGATTACGGAGCATTTT+AGG | + | chr3_1:37121141-37121160 | Msa0356870:intron | 40.0% |
| !! | CAAGTTCTTTGAAATCACGC+TGG | - | chr3_1:37121228-37121247 | None:intergenic | 40.0% |
| AGAACTTGTAATTAGGGGTG+GGG | + | chr3_1:37121240-37121259 | Msa0356870:intron | 40.0% | |
| GAATTATGGGAGAATGGATG+AGG | + | chr3_1:37121311-37121330 | Msa0356870:intron | 40.0% | |
| TACAGTAGTGTTCAATCTGC+AGG | + | chr3_1:37121520-37121539 | Msa0356870:intron | 40.0% | |
| GTTCAGTTAACTCATAGGGA+AGG | + | chr3_1:37121557-37121576 | Msa0356870:CDS | 40.0% | |
| TCAGTTAACTCATAGGGAAG+GGG | + | chr3_1:37121559-37121578 | Msa0356870:CDS | 40.0% | |
| AAGCATTCAGCTTCAACCAA+AGG | + | chr3_1:37121831-37121850 | Msa0356870:intron | 40.0% | |
| TGTGCAATTTGTGATGCCTT+TGG | - | chr3_1:37121850-37121869 | None:intergenic | 40.0% | |
| TAGATACTCAGCCTTGGAAA+AGG | - | chr3_1:37122181-37122200 | None:intergenic | 40.0% | |
| TGAATCTAGATACTCAGCCT+TGG | - | chr3_1:37122187-37122206 | None:intergenic | 40.0% | |
| GATTCATTTGTAGGCTTCTG+AGG | + | chr3_1:37122201-37122220 | Msa0356870:intron | 40.0% | |
| GAGAGAATGTCTCAAACTTC+AGG | + | chr3_1:37122325-37122344 | Msa0356870:CDS | 40.0% | |
| TACTTCTGAATGGTTCATGG+TGG | + | chr3_1:37122541-37122560 | Msa0356870:intron | 40.0% | |
| TTAAAGCCTGCGTAGTTAGA+TGG | - | chr3_1:37122573-37122592 | None:intergenic | 40.0% | |
| ! | TTTTCGACCACTTTCTCCTT+TGG | + | chr3_1:37122646-37122665 | Msa0356870:intron | 40.0% |
| CGTAACAGCTTTCAAACCAA+AGG | - | chr3_1:37122665-37122684 | None:intergenic | 40.0% | |
| TTCTCTGGTGATTTAGTGCA+TGG | + | chr3_1:37122849-37122868 | Msa0356870:intron | 40.0% | |
| TCTCTGGTGATTTAGTGCAT+GGG | + | chr3_1:37122850-37122869 | Msa0356870:intron | 40.0% | |
| !! | TTTAGTTCTGTGGGTTCTGT+AGG | + | chr3_1:37123090-37123109 | Msa0356870:intron | 40.0% |
| ATGATGAGAGATACCTTGCT+TGG | - | chr3_1:37123175-37123194 | None:intergenic | 40.0% | |
| ! | TTGAAACACCCTCTTGTTTG+TGG | + | chr3_1:37123212-37123231 | Msa0356870:intron | 40.0% |
| GAACTACAACCACAAACAAG+AGG | - | chr3_1:37123224-37123243 | None:intergenic | 40.0% | |
| TTCACAACCAAAGAGAGGTA+AGG | - | chr3_1:37123252-37123271 | None:intergenic | 40.0% | |
| ACGATTTCACAACCAAAGAG+AGG | - | chr3_1:37123257-37123276 | None:intergenic | 40.0% | |
| ! | GAATGGATTCAGAGCATTTC+AGG | + | chr3_1:37123556-37123575 | Msa0356870:intron | 40.0% |
| TGACGAGACAAAGAAAGTAG+TGG | - | chr3_1:37123662-37123681 | None:intergenic | 40.0% | |
| AACACGAGCTTCAAGCATTA+AGG | + | chr3_1:37123768-37123787 | Msa0356870:CDS | 40.0% | |
| ! | TGAACATTCTGAAAGTTCGG+GGG | - | chr3_1:37124111-37124130 | None:intergenic | 40.0% |
| ATCACCCGAAAATGCCAAAA+AGG | + | chr3_1:37124148-37124167 | Msa0356870:CDS | 40.0% | |
| !!! | CCAGCACAGTGCAATTTTTT+TGG | - | chr3_1:37124195-37124214 | None:intergenic | 40.0% |
| CCAAAAAAATTGCACTGTGC+TGG | + | chr3_1:37124192-37124211 | Msa0356870:intron | 40.0% | |
| AGAAATCACGAGTCCAATGA+TGG | - | chr3_1:37124282-37124301 | None:intergenic | 40.0% | |
| TACCTCTGGTATATTGTGGT+TGG | + | chr3_1:37124311-37124330 | Msa0356870:intron | 40.0% | |
| ACCTCTGGTATATTGTGGTT+GGG | + | chr3_1:37124312-37124331 | Msa0356870:intron | 40.0% | |
| AGTAATTAGGCCCAAAGAAC+AGG | + | chr3_1:37124413-37124432 | Msa0356870:intron | 40.0% | |
| ATATAGGGGATATTAAGGGG+AGG | + | chr3_1:37124471-37124490 | Msa0356870:intron | 40.0% | |
| TATAGGGGATATTAAGGGGA+GGG | + | chr3_1:37124472-37124491 | Msa0356870:intron | 40.0% | |
| TGTATAATTGGTTGAAGGGG+GGG | + | chr3_1:37124500-37124519 | Msa0356870:intron | 40.0% | |
| AGAAAAAGAACAGGTGGCAA+TGG | + | chr3_1:37124622-37124641 | Msa0356870:intron | 40.0% | |
| AGAGAAGATACATGGATCAC+AGG | + | chr3_1:37124660-37124679 | Msa0356870:intron | 40.0% | |
| GTGAGAAGGACTATATGAAG+GGG | + | chr3_1:37124687-37124706 | Msa0356870:intron | 40.0% | |
| CTATATGAAGGGGTAGCTAA+AGG | + | chr3_1:37124697-37124716 | Msa0356870:intron | 40.0% | |
| ! | AGAGAAGTTAGTTCTTCCTC+TGG | + | chr3_1:37124765-37124784 | Msa0356870:intron | 40.0% |
| ! | AGTTAGTTCTTCCTCTGGAA+AGG | + | chr3_1:37124770-37124789 | Msa0356870:intron | 40.0% |
| ! | GTTAGTTCTTCCTCTGGAAA+GGG | + | chr3_1:37124771-37124790 | Msa0356870:intron | 40.0% |
| ! | TTAGTTCTTCCTCTGGAAAG+GGG | + | chr3_1:37124772-37124791 | Msa0356870:intron | 40.0% |
| TCACACTTTGTACTCGTCAA+TGG | - | chr3_1:37125425-37125444 | None:intergenic | 40.0% | |
| TCACACTTTGTACTCGTCAA+TGG | - | chr3_1:37125425-37125444 | None:intergenic | 40.0% | |
| ATGCTTTCCAGTATTCCATG+AGG | + | chr3_1:37125558-37125577 | Msa0356870:intron | 40.0% | |
| TTTCCAGTATTCCATGAGGT+TGG | + | chr3_1:37125562-37125581 | Msa0356870:intron | 40.0% | |
| AGAAGACCGAAAACACCTAT+AGG | + | chr3_1:37125749-37125768 | Msa0356870:intron | 40.0% | |
| TAAAGAAGGCTTATCCCACA+AGG | - | chr3_1:37125814-37125833 | None:intergenic | 40.0% | |
| CATTATCAGGTAGTTTCGTC+TGG | + | chr3_1:37125921-37125940 | Msa0356870:intron | 40.0% | |
| !! | TTCTGGGGCATAAACTGATT+TGG | - | chr3_1:37125995-37126014 | None:intergenic | 40.0% |
| AATATGCGTCCAACGTCAAA+AGG | - | chr3_1:37126018-37126037 | None:intergenic | 40.0% | |
| !! | TTTGTTTTCAGCTGCTGGTT+TGG | + | chr3_1:37126264-37126283 | Msa0356870:intron | 40.0% |
| !!! | TTGTTTTCAGCTGCTGGTTT+GGG | + | chr3_1:37126265-37126284 | Msa0356870:intron | 40.0% |
| ! | TGGTTTGGGAAACTATGTAG+AGG | + | chr3_1:37126279-37126298 | Msa0356870:CDS | 40.0% |
| CAATGCAGGTATTTCAACTG+TGG | + | chr3_1:37126756-37126775 | Msa0356870:intron | 40.0% | |
| ACTGTGGTAACTGTCAATTC+TGG | + | chr3_1:37126772-37126791 | Msa0356870:intron | 40.0% | |
| TGACAACAAGAAGCAAGAGT+GGG | - | chr3_1:37126873-37126892 | None:intergenic | 40.0% | |
| ATGACAACAAGAAGCAAGAG+TGG | - | chr3_1:37126874-37126893 | None:intergenic | 40.0% | |
| !!! | CTATTTTGGCAACCAAAGCA+AGG | + | chr3_1:37126979-37126998 | Msa0356870:CDS | 40.0% |
| ACAAAAGAGAGTCCTTGCTT+TGG | - | chr3_1:37126994-37127013 | None:intergenic | 40.0% | |
| !! | TCTGAAGGAGTTTTGTGATC+TGG | - | chr3_1:37127228-37127247 | None:intergenic | 40.0% |
| ! | CAAGTCCATCATGTTTCTGA+AGG | - | chr3_1:37127243-37127262 | None:intergenic | 40.0% |
| TGCTATGGAATCATACCTTG+TGG | + | chr3_1:37127349-37127368 | Msa0356870:three_prime_UTR | 40.0% | |
| GAGTACAATTATGGAGTTGG+TGG | + | chr3_1:37127455-37127474 | Msa0356870:three_prime_UTR | 40.0% | |
| AACCATCAATTAGCACCTCA+AGG | - | chr3_1:37127502-37127521 | None:intergenic | 40.0% | |
| ! | AGCAGAAAGAGAGAGAGTGT+AGG | - | chr3_1:37120040-37120059 | None:intergenic | 45.0% |
| CTCTCTTTCTGCTACCTTCT+TGG | + | chr3_1:37120047-37120066 | Msa0356870:five_prime_UTR | 45.0% | |
| CATAGTGTCACCAAAACTGC+GGG | - | chr3_1:37120294-37120313 | None:intergenic | 45.0% | |
| CCTTCATCGATAGCACTTTC+GGG | - | chr3_1:37120412-37120431 | None:intergenic | 45.0% | |
| !! | GAAAGTGCTATCGATGAAGG+AGG | + | chr3_1:37120412-37120431 | Msa0356870:CDS | 45.0% |
| TGCTGCTAAGTTGTCTGAAG+AGG | + | chr3_1:37120526-37120545 | Msa0356870:CDS | 45.0% | |
| GGTTGGAATCCTTAAAAGGG+CGG | + | chr3_1:37120722-37120741 | Msa0356870:CDS | 45.0% | |
| GTTGGAATCCTTAAAAGGGC+GGG | + | chr3_1:37120723-37120742 | Msa0356870:CDS | 45.0% | |
| GACAAAAGATGGCCTGAACA+TGG | + | chr3_1:37120887-37120906 | Msa0356870:intron | 45.0% | |
| CAAAAGATGGCCTGAACATG+GGG | + | chr3_1:37120889-37120908 | Msa0356870:intron | 45.0% | |
| AAAAGATGGCCTGAACATGG+GGG | + | chr3_1:37120890-37120909 | Msa0356870:intron | 45.0% | |
| CTAACACAACCCCACTAAAC+CGG | - | chr3_1:37120934-37120953 | None:intergenic | 45.0% | |
| AACCAACTCCATGTTGTTGG+AGG | + | chr3_1:37121028-37121047 | Msa0356870:intron | 45.0% | |
| GTCTCAAACTTCAGGAAACC+AGG | + | chr3_1:37122333-37122352 | Msa0356870:CDS | 45.0% | |
| GTGGAGAAATTTGTGGCAGT+TGG | + | chr3_1:37122771-37122790 | Msa0356870:intron | 45.0% | |
| ACCAAAGAGAGGTAAGGTCA+GGG | - | chr3_1:37123246-37123265 | None:intergenic | 45.0% | |
| AACCAAAGAGAGGTAAGGTC+AGG | - | chr3_1:37123247-37123266 | None:intergenic | 45.0% | |
| CAGTTGGCAAGGGAAAAGAA+AGG | + | chr3_1:37123999-37124018 | Msa0356870:intron | 45.0% | |
| !! | TGAAAGTTCGGGGGCATTAT+TGG | - | chr3_1:37124102-37124121 | None:intergenic | 45.0% |
| ! | GCTGGGTGAATAGCTTTTGA+AGG | + | chr3_1:37124210-37124229 | Msa0356870:intron | 45.0% |
| GTCAGTTGGGTATCCATCAT+TGG | + | chr3_1:37124266-37124285 | Msa0356870:intron | 45.0% | |
| ACCCAACCACAATATACCAG+AGG | - | chr3_1:37124316-37124335 | None:intergenic | 45.0% | |
| ACTAGAAGGGCCTGTTCTTT+GGG | - | chr3_1:37124426-37124445 | None:intergenic | 45.0% | |
| AACTAGAAGGGCCTGTTCTT+TGG | - | chr3_1:37124427-37124446 | None:intergenic | 45.0% | |
| ATAGGGGATATTAAGGGGAG+GGG | + | chr3_1:37124473-37124492 | Msa0356870:intron | 45.0% | |
| GTATAATTGGTTGAAGGGGG+GGG | + | chr3_1:37124501-37124520 | Msa0356870:intron | 45.0% | |
| TATAATTGGTTGAAGGGGGG+GGG | + | chr3_1:37124502-37124521 | Msa0356870:intron | 45.0% | |
| ACTAAGAAACCCCTTTCCAG+AGG | - | chr3_1:37124784-37124803 | None:intergenic | 45.0% | |
| CTATGCACCAACTTGATGGA+GGG | - | chr3_1:37125132-37125151 | None:intergenic | 45.0% | |
| TCTATGCACCAACTTGATGG+AGG | - | chr3_1:37125133-37125152 | None:intergenic | 45.0% | |
| CTTCCAACCTCATGGAATAC+TGG | - | chr3_1:37125568-37125587 | None:intergenic | 45.0% | |
| CTTCTGCAACCTCTAGTGAT+TGG | - | chr3_1:37125734-37125753 | None:intergenic | 45.0% | |
| ATGTAGCCAATTCCTCCTTG+TGG | + | chr3_1:37125796-37125815 | Msa0356870:intron | 45.0% | |
| TGTAGCCAATTCCTCCTTGT+GGG | + | chr3_1:37125797-37125816 | Msa0356870:intron | 45.0% | |
| CTTATCCCACAAGGAGGAAT+TGG | - | chr3_1:37125805-37125824 | None:intergenic | 45.0% | |
| GTGCAAGTTAATGGCACAGT+AGG | - | chr3_1:37125863-37125882 | None:intergenic | 45.0% | |
| TCCAACGTCAAAAGGTTCTG+GGG | - | chr3_1:37126010-37126029 | None:intergenic | 45.0% | |
| GTCCAACGTCAAAAGGTTCT+GGG | - | chr3_1:37126011-37126030 | None:intergenic | 45.0% | |
| CAAACCTGGTTCAATTGGAC+CGG | - | chr3_1:37126088-37126107 | None:intergenic | 45.0% | |
| GTAGCCAAACCTGGTTCAAT+TGG | - | chr3_1:37126093-37126112 | None:intergenic | 45.0% | |
| ATGCAGCTATCATGCTTGCA+AGG | + | chr3_1:37127043-37127062 | Msa0356870:CDS | 45.0% | |
| ! | AGCCTTGAGGTGCTAATTGA+TGG | + | chr3_1:37127497-37127516 | Msa0356870:three_prime_UTR | 45.0% |
| !!! | AATAAAATGATTAAATTTTA+CGG | - | chr3_1:37122827-37122846 | None:intergenic | 5.0% |
| ! | ACAAGGATGACCCGCAGTTT+TGG | + | chr3_1:37120281-37120300 | Msa0356870:CDS | 50.0% |
| !! | CCCGAAAGTGCTATCGATGA+AGG | + | chr3_1:37120409-37120428 | Msa0356870:CDS | 50.0% |
| AAAGAGTCCCTGTCCCACAT+CGG | + | chr3_1:37120865-37120884 | Msa0356870:intron | 50.0% | |
| ! | CTTTTGTCCGATGTGGGACA+GGG | - | chr3_1:37120875-37120894 | None:intergenic | 50.0% |
| ! | TCTTTTGTCCGATGTGGGAC+AGG | - | chr3_1:37120876-37120895 | None:intergenic | 50.0% |
| GTCCCACATCGGACAAAAGA+TGG | + | chr3_1:37120876-37120895 | Msa0356870:intron | 50.0% | |
| ! | GGCCATCTTTTGTCCGATGT+GGG | - | chr3_1:37120881-37120900 | None:intergenic | 50.0% |
| ! | AGGCCATCTTTTGTCCGATG+TGG | - | chr3_1:37120882-37120901 | None:intergenic | 50.0% |
| ! | ACCTCACAAGCCGGTTTAGT+GGG | + | chr3_1:37120921-37120940 | Msa0356870:intron | 50.0% |
| CGGTTTAGTGGGGTTGTGTT+AGG | + | chr3_1:37120932-37120951 | Msa0356870:intron | 50.0% | |
| ACATGAGGCCTCCAACAACA+TGG | - | chr3_1:37121039-37121058 | None:intergenic | 50.0% | |
| AAGGCCATGACTCGTACATG+AGG | - | chr3_1:37121054-37121073 | None:intergenic | 50.0% | |
| ACTTGTAATTAGGGGTGGGG+TGG | + | chr3_1:37121243-37121262 | Msa0356870:intron | 50.0% | |
| CTTGTAATTAGGGGTGGGGT+GGG | + | chr3_1:37121244-37121263 | Msa0356870:intron | 50.0% | |
| TTGTAATTAGGGGTGGGGTG+GGG | + | chr3_1:37121245-37121264 | Msa0356870:intron | 50.0% | |
| ACACTCACAGAGGGAGTAGA+TGG | + | chr3_1:37121278-37121297 | Msa0356870:intron | 50.0% | |
| AGGGGAGCTAGTACAACAGA+AGG | + | chr3_1:37121577-37121596 | Msa0356870:CDS | 50.0% | |
| GCTAGTACAACAGAAGGCTG+AGG | + | chr3_1:37121583-37121602 | Msa0356870:CDS | 50.0% | |
| GGTTGAAGCTGAATGCTTGC+AGG | - | chr3_1:37121829-37121848 | None:intergenic | 50.0% | |
| AGCAGTTCAAAGAGTGGAGG+AGG | + | chr3_1:37122288-37122307 | Msa0356870:CDS | 50.0% | |
| TCTGTGGGTTCTGTAGGACT+TGG | + | chr3_1:37123096-37123115 | Msa0356870:intron | 50.0% | |
| AATGCTGCATCAGCCAAGCA+AGG | + | chr3_1:37123159-37123178 | Msa0356870:CDS | 50.0% | |
| TCCCTGACCTTACCTCTCTT+TGG | + | chr3_1:37123242-37123261 | Msa0356870:intron | 50.0% | |
| GGCAAGGGAAAAGAAAGGAG+AGG | + | chr3_1:37124004-37124023 | Msa0356870:CDS | 50.0% | |
| GGTCTTCATGCGAGTCAGTT+GGG | + | chr3_1:37124253-37124272 | Msa0356870:intron | 50.0% | |
| TAGGGGATATTAAGGGGAGG+GGG | + | chr3_1:37124474-37124493 | Msa0356870:intron | 50.0% | |
| GGGAGGGGGACATGTATAAT+TGG | + | chr3_1:37124488-37124507 | Msa0356870:intron | 50.0% | |
| ATAATTGGTTGAAGGGGGGG+GGG | + | chr3_1:37124503-37124522 | Msa0356870:intron | 50.0% | |
| ACAGGTGGCAATGGCATGAA+TGG | + | chr3_1:37124631-37124650 | Msa0356870:intron | 50.0% | |
| TGGCAATGGCATGAATGGAG+AGG | + | chr3_1:37124636-37124655 | Msa0356870:intron | 50.0% | |
| GGCAATGGCATGAATGGAGA+GGG | + | chr3_1:37124637-37124656 | Msa0356870:intron | 50.0% | |
| GGAGAGGGAGAGAAGATACA+TGG | + | chr3_1:37124652-37124671 | Msa0356870:intron | 50.0% | |
| GGATCACAGGACAAGTGAGA+AGG | + | chr3_1:37124673-37124692 | Msa0356870:intron | 50.0% | |
| GAAGGGGTAGCTAAAGGAAG+AGG | + | chr3_1:37124703-37124722 | Msa0356870:intron | 50.0% | |
| TCCAACACCCTCCATCAAGT+TGG | + | chr3_1:37125122-37125141 | Msa0356870:intron | 50.0% | |
| ! | ACCAACTTGATGGAGGGTGT+TGG | - | chr3_1:37125126-37125145 | None:intergenic | 50.0% |
| ! | AACGGGTCTTGTCAAGCTCT+TGG | + | chr3_1:37125190-37125209 | Msa0356870:intron | 50.0% |
| ATTCGGAGCTTCCAACCTCA+TGG | - | chr3_1:37125576-37125595 | None:intergenic | 50.0% | |
| AGAAGGCTTATCCCACAAGG+AGG | - | chr3_1:37125811-37125830 | None:intergenic | 50.0% | |
| CGTCCAACGTCAAAAGGTTC+TGG | - | chr3_1:37126012-37126031 | None:intergenic | 50.0% | |
| CAGATCACACTGTCAACCAC+CGG | + | chr3_1:37126066-37126085 | Msa0356870:CDS | 50.0% | |
| CGGTCCAATTGAACCAGGTT+TGG | + | chr3_1:37126086-37126105 | Msa0356870:intron | 50.0% | |
| ACCAGGTTTGGCTACAATGC+TGG | + | chr3_1:37126098-37126117 | Msa0356870:intron | 50.0% | |
| TCCAGCATTGTAGCCAAACC+TGG | - | chr3_1:37126102-37126121 | None:intergenic | 50.0% | |
| ACAAGAAGCAAGAGTGGGAG+AGG | - | chr3_1:37126868-37126887 | None:intergenic | 50.0% | |
| ! | CTTCAGCTTTGTGGAGTTCG+AGG | + | chr3_1:37126931-37126950 | Msa0356870:intron | 50.0% |
| TTTGTGGAGTTCGAGGAGGT+GGG | + | chr3_1:37126938-37126957 | Msa0356870:CDS | 50.0% | |
| CAGCTATCATGCTTGCAAGG+AGG | + | chr3_1:37127046-37127065 | Msa0356870:CDS | 50.0% | |
| CAAGGCTCAAACACTGGACA+TGG | - | chr3_1:37127484-37127503 | None:intergenic | 50.0% | |
| TGTCCAGTGTTTGAGCCTTG+AGG | + | chr3_1:37127484-37127503 | Msa0356870:three_prime_UTR | 50.0% | |
| ACGCGAAACTGCACAGCTGT+TGG | + | chr3_1:37120442-37120461 | Msa0356870:CDS | 55.0% | |
| GGAATCCTTAAAAGGGCGGG+TGG | + | chr3_1:37120726-37120745 | Msa0356870:CDS | 55.0% | |
| ATCCTTAAAAGGGCGGGTGG+CGG | + | chr3_1:37120729-37120748 | Msa0356870:CDS | 55.0% | |
| TGAGGATTGCCCCCATGTTC+AGG | - | chr3_1:37120902-37120921 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr3_1:37120912-37120931 | Msa0356870:intron | 55.0% | |
| !! | CTAAACCGGCTTGTGAGGTG+AGG | - | chr3_1:37120920-37120939 | None:intergenic | 55.0% |
| ! | CACCTCACAAGCCGGTTTAG+TGG | + | chr3_1:37120920-37120939 | Msa0356870:intron | 55.0% |
| ! | CCTCACAAGCCGGTTTAGTG+GGG | + | chr3_1:37120922-37120941 | Msa0356870:intron | 55.0% |
| GGCCTCCAACAACATGGAGT+TGG | - | chr3_1:37121033-37121052 | None:intergenic | 55.0% | |
| GAGGCCTCATGTACGAGTCA+TGG | + | chr3_1:37121047-37121066 | Msa0356870:intron | 55.0% | |
| GTACGAGTCATGGCCTTCTG+TGG | + | chr3_1:37121057-37121076 | Msa0356870:intron | 55.0% | |
| TGTAATTAGGGGTGGGGTGG+GGG | + | chr3_1:37121246-37121265 | Msa0356870:intron | 55.0% | |
| TTTGGGGGGACACTCACAGA+GGG | + | chr3_1:37121269-37121288 | Msa0356870:intron | 55.0% | |
| CACTCTTTGAACTGCTGCCC+GGG | - | chr3_1:37122284-37122303 | None:intergenic | 55.0% | |
| CCACTCTTTGAACTGCTGCC+CGG | - | chr3_1:37122285-37122304 | None:intergenic | 55.0% | |
| GGCAGCAGTTCAAAGAGTGG+AGG | + | chr3_1:37122285-37122304 | Msa0356870:CDS | 55.0% | |
| !! | TCGGGGGCATTATTGGAGCA+AGG | - | chr3_1:37124095-37124114 | None:intergenic | 55.0% |
| GGGTCTTCATGCGAGTCAGT+TGG | + | chr3_1:37124252-37124271 | Msa0356870:intron | 55.0% | |
| TAATTGGTTGAAGGGGGGGG+GGG | + | chr3_1:37124504-37124523 | Msa0356870:intron | 55.0% | |
| !! | CCAGACAGAGAAGCGCTTCA+AGG | - | chr3_1:37125369-37125388 | None:intergenic | 55.0% |
| ! | CCTTGAAGCGCTTCTCTGTC+TGG | + | chr3_1:37125366-37125385 | Msa0356870:intron | 55.0% |
| !! | CCAGACAGAGAAGCGCTTCA+AGG | - | chr3_1:37125369-37125388 | None:intergenic | 55.0% |
| ! | CCTTGAAGCGCTTCTCTGTC+TGG | + | chr3_1:37125366-37125385 | Msa0356870:intron | 55.0% |
| ! | GCCCCAGAACCTTTTGACGT+TGG | + | chr3_1:37126006-37126025 | Msa0356870:CDS | 55.0% |
| ACCACCGGTCCAATTGAACC+AGG | + | chr3_1:37126081-37126100 | Msa0356870:CDS | 55.0% | |
| ACCTGGTTCAATTGGACCGG+TGG | - | chr3_1:37126085-37126104 | None:intergenic | 55.0% | |
| ! | CAGCTTTGTGGAGTTCGAGG+AGG | + | chr3_1:37126934-37126953 | Msa0356870:intron | 55.0% |
| CTTTGTGGAGTTCGAGGAGG+TGG | + | chr3_1:37126937-37126956 | Msa0356870:CDS | 55.0% | |
| GCACCTCAAGGCTCAAACAC+TGG | - | chr3_1:37127490-37127509 | None:intergenic | 55.0% | |
| TCCTTAAAAGGGCGGGTGGC+GGG | + | chr3_1:37120730-37120749 | Msa0356870:CDS | 60.0% | |
| !! | GCGGGTGGCGGGAAGAAATA+AGG | + | chr3_1:37120741-37120760 | Msa0356870:CDS | 60.0% |
| !! | CCCCACTAAACCGGCTTGTG+AGG | - | chr3_1:37120925-37120944 | None:intergenic | 60.0% |
| TGGCCTTCTGTGGAGCTGCT+CGG | + | chr3_1:37121067-37121086 | Msa0356870:intron | 60.0% | |
| GTACCGAGCAGCTCCACAGA+AGG | - | chr3_1:37121073-37121092 | None:intergenic | 60.0% | |
| GTTTGGGGGGACACTCACAG+AGG | + | chr3_1:37121268-37121287 | Msa0356870:intron | 60.0% | |
| CCGGGCAGCAGTTCAAAGAG+TGG | + | chr3_1:37122282-37122301 | Msa0356870:CDS | 60.0% | |
| AATTGGTTGAAGGGGGGGGG+GGG | + | chr3_1:37124505-37124524 | Msa0356870:intron | 60.0% | |
| TCGAGGAGGTGGGAATGCTG+CGG | + | chr3_1:37126948-37126967 | Msa0356870:CDS | 60.0% | |
| ! | CTGCGGCGCAGGCACTATTT+TGG | + | chr3_1:37126965-37126984 | Msa0356870:CDS | 60.0% |
| ! | TCCCGCCACCCGCCCTTTTA+AGG | - | chr3_1:37120734-37120753 | None:intergenic | 65.0% |
| TTAGGGGTGGGGTGGGGGTT+TGG | + | chr3_1:37121251-37121270 | Msa0356870:intron | 65.0% | |
| TAGGGGTGGGGTGGGGGTTT+GGG | + | chr3_1:37121252-37121271 | Msa0356870:intron | 65.0% | |
| ATTGGTTGAAGGGGGGGGGG+GGG | + | chr3_1:37124506-37124525 | Msa0356870:intron | 65.0% | |
| AGGGGTGGGGTGGGGGTTTG+GGG | + | chr3_1:37121253-37121272 | Msa0356870:intron | 70.0% | |
| TTGGTTGAAGGGGGGGGGGG+GGG | + | chr3_1:37124507-37124526 | Msa0356870:intron | 70.0% | |
| AGGTGGGAATGCTGCGGCGC+AGG | + | chr3_1:37126954-37126973 | Msa0356870:CDS | 70.0% | |
| GGGGTGGGGTGGGGGTTTGG+GGG | + | chr3_1:37121254-37121273 | Msa0356870:intron | 75.0% | |
| GGGTGGGGTGGGGGTTTGGG+GGG | + | chr3_1:37121255-37121274 | Msa0356870:intron | 75.0% | |
| TGGTTGAAGGGGGGGGGGGG+GGG | + | chr3_1:37124508-37124527 | Msa0356870:intron | 75.0% | |
| ! | GGTTGAAGGGGGGGGGGGGG+GGG | + | chr3_1:37124509-37124528 | Msa0356870:intron | 80.0% |
| ! | GTTGAAGGGGGGGGGGGGGG+GGG | + | chr3_1:37124510-37124529 | Msa0356870:intron | 80.0% |
| ! | TTGAAGGGGGGGGGGGGGGG+GGG | + | chr3_1:37124511-37124530 | Msa0356870:intron | 80.0% |
| ! | TGAAGGGGGGGGGGGGGGGG+GGG | + | chr3_1:37124512-37124531 | Msa0356870:intron | 85.0% |
| ! | GAAGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:37124513-37124532 | Msa0356870:intron | 90.0% |
| ! | AAGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:37124514-37124533 | Msa0356870:intron | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:37124515-37124534 | Msa0356870:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 37119965 | 37127559 | 37119965 | ID=Msa0356870;Name=Msa0356870 |
| chr3_1 | mRNA | 37119965 | 37127559 | 37119965 | ID=Msa0356870-mRNA-1;Parent=Msa0356870;Name=Msa0356870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=188|1|1|1|0.83|0.84|13|305|490 |
| chr3_1 | exon | 37119965 | 37120133 | 37119965 | ID=Msa0356870-mRNA-1:exon:6719;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37120259 | 37120547 | 37120259 | ID=Msa0356870-mRNA-1:exon:6720;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37120661 | 37120789 | 37120661 | ID=Msa0356870-mRNA-1:exon:6721;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37121542 | 37121634 | 37121542 | ID=Msa0356870-mRNA-1:exon:6722;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37122214 | 37122354 | 37122214 | ID=Msa0356870-mRNA-1:exon:6723;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37123112 | 37123180 | 37123112 | ID=Msa0356870-mRNA-1:exon:6724;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37123755 | 37123838 | 37123755 | ID=Msa0356870-mRNA-1:exon:6725;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37124002 | 37124182 | 37124002 | ID=Msa0356870-mRNA-1:exon:6726;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37125986 | 37126102 | 37125986 | ID=Msa0356870-mRNA-1:exon:6727;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37126275 | 37126333 | 37126275 | ID=Msa0356870-mRNA-1:exon:6728;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37126629 | 37126763 | 37126629 | ID=Msa0356870-mRNA-1:exon:6729;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37126937 | 37127086 | 37126937 | ID=Msa0356870-mRNA-1:exon:6730;Parent=Msa0356870-mRNA-1 |
| chr3_1 | exon | 37127210 | 37127559 | 37127210 | ID=Msa0356870-mRNA-1:exon:6731;Parent=Msa0356870-mRNA-1 |
| chr3_1 | five_prime_UTR | 37119965 | 37120133 | 37119965 | ID=Msa0356870-mRNA-1:five_prime_utr;Parent=Msa0356870-mRNA-1 |
| chr3_1 | five_prime_UTR | 37120259 | 37120277 | 37120259 | ID=Msa0356870-mRNA-1:five_prime_utr;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37120278 | 37120547 | 37120278 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37120661 | 37120789 | 37120661 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37121542 | 37121634 | 37121542 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37122214 | 37122354 | 37122214 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37123112 | 37123180 | 37123112 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37123755 | 37123838 | 37123755 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37124002 | 37124182 | 37124002 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37125986 | 37126102 | 37125986 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37126275 | 37126333 | 37126275 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37126629 | 37126763 | 37126629 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37126937 | 37127086 | 37126937 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | CDS | 37127210 | 37127254 | 37127210 | ID=Msa0356870-mRNA-1:cds;Parent=Msa0356870-mRNA-1 |
| chr3_1 | three_prime_UTR | 37127255 | 37127559 | 37127255 | ID=Msa0356870-mRNA-1:three_prime_utr;Parent=Msa0356870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
