Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403140 | XP_024633839.1 | 95.510 | 490 | 15 | 1 | 1 | 483 | 1 | 490 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403140 | sp|O48791|SCAB1_ARATH | 73.077 | 494 | 118 | 4 | 1 | 481 | 1 | 492 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403140 | A0A396IPJ6 | 95.510 | 490 | 15 | 1 | 1 | 483 | 1 | 490 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0403140 | Msa0528210 | 0.809415 | 1.913608e-50 | -8.615850e-47 |
| Msa0403140 | Msa1130030 | 0.815311 | 9.867194e-52 | -8.615850e-47 |
| Msa0356870 | Msa0403140 | 0.960342 | 1.892544e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403140 | MtrunA17_Chr3g0093711 | 95.510 | 490 | 15 | 1 | 1 | 483 | 1 | 490 | 0.0 | 964 |
| Msa0403140 | MtrunA17_Chr5g0441311 | 83.299 | 491 | 71 | 3 | 1 | 480 | 12 | 502 | 0.0 | 833 |
| Msa0403140 | MtrunA17_Chr7g0255781 | 57.582 | 488 | 194 | 4 | 1 | 476 | 1 | 487 | 0.0 | 562 |
| Msa0403140 | MtrunA17_Chr6g0482421 | 55.556 | 117 | 30 | 4 | 91 | 199 | 11 | 113 | 1.71e-24 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403140 | AT2G26770.2 | 73.077 | 494 | 118 | 4 | 1 | 481 | 1 | 492 | 0.0 | 738 |
| Msa0403140 | AT2G26770.3 | 73.077 | 494 | 118 | 4 | 1 | 481 | 1 | 492 | 0.0 | 738 |
| Msa0403140 | AT2G26770.1 | 73.077 | 494 | 118 | 4 | 1 | 481 | 1 | 492 | 0.0 | 738 |
| Msa0403140 | AT2G40820.2 | 53.503 | 471 | 205 | 4 | 19 | 476 | 22 | 491 | 5.78e-178 | 508 |
| Msa0403140 | AT2G40820.1 | 53.503 | 471 | 205 | 4 | 19 | 476 | 22 | 491 | 5.78e-178 | 508 |
| Msa0403140 | AT2G40820.4 | 53.503 | 471 | 205 | 4 | 19 | 476 | 47 | 516 | 1.86e-177 | 508 |
| Msa0403140 | AT2G40820.3 | 53.503 | 471 | 205 | 4 | 19 | 476 | 34 | 503 | 1.96e-177 | 508 |
| Msa0403140 | AT3G56480.1 | 54.936 | 466 | 195 | 5 | 25 | 476 | 25 | 489 | 4.04e-175 | 501 |
| Msa0403140 | AT2G40820.5 | 52.356 | 382 | 172 | 3 | 104 | 476 | 1 | 381 | 9.41e-142 | 412 |
Find 120 sgRNAs with CRISPR-Local
Find 490 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAAATTCAGACAATATT+TGG | 0.092970 | 3_2:-32663996 | None:intergenic |
| CTCTCTTTCTGCTACCTTCT+TGG | 0.111033 | 3_2:+32656527 | Msa0403140:five_prime_UTR |
| CGATTTCCTACTTACAAAAT+TGG | 0.176588 | 3_2:+32656842 | Msa0403140:CDS |
| CTGCGGCGCAGGCACTATTT+TGG | 0.185288 | 3_2:+32663421 | Msa0403140:CDS |
| CCTCATTTATATGAATTAGA+AGG | 0.272590 | 3_2:+32660608 | Msa0403140:CDS |
| TCCTTCATCGATAGCACTTT+CGG | 0.275084 | 3_2:-32656890 | None:intergenic |
| GAAAGTTTAGAGTACAATTA+TGG | 0.281165 | 3_2:+32663902 | Msa0403140:three_prime_UTR |
| GATGATGTGAATCATTTGTC+TGG | 0.288215 | 3_2:-32663096 | None:intergenic |
| GATGGGTTGGAATCCTTAAA+AGG | 0.293122 | 3_2:+32657198 | Msa0403140:CDS |
| CGTCCAACGTCAAAAGGTTC+TGG | 0.297621 | 3_2:-32662465 | None:intergenic |
| TGAACTCGAATAGAATTCTT+TGG | 0.297696 | 3_2:-32663191 | None:intergenic |
| CCTTCATCGATAGCACTTTC+GGG | 0.304015 | 3_2:-32656889 | None:intergenic |
| ACAAGGATGACCCGCAGTTT+TGG | 0.345696 | 3_2:+32656761 | Msa0403140:CDS |
| ATTGAACATTCTGAAAGTTC+GGG | 0.352004 | 3_2:-32660683 | None:intergenic |
| AATTGAACATTCTGAAAGTT+CGG | 0.353771 | 3_2:-32660684 | None:intergenic |
| AACACGAGCTTCAAGCATTA+AGG | 0.356617 | 3_2:+32660341 | Msa0403140:CDS |
| GCGAGTGGCGGGAAGAAATA+AGG | 0.360346 | 3_2:+32657221 | Msa0403140:CDS |
| CCACTCTTTGAACTGCTGCC+CGG | 0.360438 | 3_2:-32658829 | None:intergenic |
| TTGCAGTTCAGTTAACTCAT+AGG | 0.368181 | 3_2:+32658064 | Msa0403140:CDS |
| GAGAGAATGTCTCAAACTTC+AGG | 0.371204 | 3_2:+32658872 | Msa0403140:CDS |
| TTCTGGGGCATAAACTGATT+TGG | 0.372582 | 3_2:-32662448 | None:intergenic |
| ATCACCCGAAAATGCCAAAA+AGG | 0.374989 | 3_2:+32660721 | Msa0403140:CDS |
| CACTCTTTGAACTGCTGCCC+GGG | 0.388647 | 3_2:-32658828 | None:intergenic |
| GATTCCATAGCACAATAAAA+AGG | 0.394049 | 3_2:-32663794 | None:intergenic |
| GTAGCCAAACCTGGTTCAAT+TGG | 0.395153 | 3_2:-32662546 | None:intergenic |
| TTACAGATTATGAGTAGTTA+AGG | 0.398519 | 3_2:-32656595 | None:intergenic |
| TCCCACATTAAGTATATGAA+TGG | 0.411218 | 3_2:-32663128 | None:intergenic |
| AGCCTTGAGGTGCTAATTGA+TGG | 0.411294 | 3_2:+32663953 | Msa0403140:three_prime_UTR |
| CTTTGTGGAGTTCGAGGAGG+TGG | 0.411973 | 3_2:+32663393 | Msa0403140:CDS |
| CTTCAGCTTTGTGGAGTTCG+AGG | 0.431632 | 3_2:+32663387 | Msa0403140:intron |
| CCAGTTGAGGGACCAGTACT+GGG | 0.432783 | 3_2:+32656424 | None:intergenic |
| AGGTGGGAATGCTGCGGCGC+AGG | 0.440198 | 3_2:+32663410 | Msa0403140:CDS |
| ACAAAAGAGAGTCCTTGCTT+TGG | 0.450797 | 3_2:-32663447 | None:intergenic |
| TCCTTAAAAGGGCGAGTGGC+GGG | 0.450878 | 3_2:+32657210 | Msa0403140:CDS |
| TTAGAGTACAATTATGGAGT+TGG | 0.457153 | 3_2:+32663908 | Msa0403140:three_prime_UTR |
| TGCTAAGAAACTTGTATATG+AGG | 0.457477 | 3_2:+32658772 | Msa0403140:CDS |
| AAAGAAGATAAGAGATGGGT+TGG | 0.458713 | 3_2:+32657185 | Msa0403140:CDS |
| CATTTGAATCAGAGAGAGAA+AGG | 0.460633 | 3_2:+32663475 | Msa0403140:CDS |
| TGAGAATGAAGCTTTGTAAA+GGG | 0.466239 | 3_2:+32663155 | Msa0403140:CDS |
| AGTATATGAATGGATTCAGT+TGG | 0.467239 | 3_2:-32663118 | None:intergenic |
| GTCCAACGTCAAAAGGTTCT+GGG | 0.473124 | 3_2:-32662464 | None:intergenic |
| TTAGAAGGGACTGAAACATT+AGG | 0.479469 | 3_2:+32660623 | Msa0403140:CDS |
| GATTCATTTGTAGGCTTCTG+AGG | 0.480823 | 3_2:+32658748 | Msa0403140:intron |
| AGAGAATGCCGCCCCAGTAC+TGG | 0.484186 | 3_2:-32656436 | None:intergenic |
| TGCAGTTCAGTTAACTCATA+GGG | 0.484553 | 3_2:+32658065 | Msa0403140:CDS |
| TTCATCAACTATCACTCATA+AGG | 0.485027 | 3_2:-32663882 | None:intergenic |
| ATGAGAATGAAGCTTTGTAA+AGG | 0.488741 | 3_2:+32663154 | Msa0403140:CDS |
| TAGTAAATTTGAGAAGGGTT+TGG | 0.490035 | 3_2:+32656979 | Msa0403140:CDS |
| ATCCATTCATATACTTAATG+TGG | 0.494470 | 3_2:+32663126 | Msa0403140:CDS |
| GAGTACAATTATGGAGTTGG+TGG | 0.495107 | 3_2:+32663911 | Msa0403140:three_prime_UTR |
| GCACCTCAAGGCTCAAACAC+TGG | 0.496627 | 3_2:-32663943 | None:intergenic |
| CTCATTTATATGAATTAGAA+GGG | 0.497583 | 3_2:+32660609 | Msa0403140:CDS |
| TGGATCTAATAATCAGATCA+TGG | 0.501525 | 3_2:+32656862 | Msa0403140:CDS |
| TAATTGCAGATTGTTCTAGC+TGG | 0.505097 | 3_2:+32663657 | Msa0403140:intron |
| CAAGTTTGTATTATTTCAGA+AGG | 0.506009 | 3_2:+32662495 | Msa0403140:CDS |
| CACATGTAATACAACAAAAG+AGG | 0.507686 | 3_2:-32663754 | None:intergenic |
| ATTCTATTCGAGTTCAATGC+AGG | 0.509177 | 3_2:+32663198 | Msa0403140:CDS |
| AGCAGTTCAAAGAGTGGAGG+AGG | 0.517740 | 3_2:+32658835 | Msa0403140:CDS |
| CAAGTCCATCATGTTTCTGA+AGG | 0.520285 | 3_2:-32663696 | None:intergenic |
| AATATGCGTCCAACGTCAAA+AGG | 0.523688 | 3_2:-32662471 | None:intergenic |
| CTTGCTAGTAAATTTGAGAA+GGG | 0.528068 | 3_2:+32656974 | Msa0403140:CDS |
| TTTCAGAATGTTCAATTCAG+TGG | 0.532345 | 3_2:+32660690 | Msa0403140:CDS |
| CCCGAAAGTGCTATCGATGA+AGG | 0.534861 | 3_2:+32656889 | Msa0403140:CDS |
| GTCTCAAACTTCAGGAAACC+AGG | 0.541401 | 3_2:+32658880 | Msa0403140:CDS |
| CCTTGCTAGTAAATTTGAGA+AGG | 0.543952 | 3_2:+32656973 | Msa0403140:CDS |
| AAACTCCTTCAGAAACATGA+TGG | 0.544547 | 3_2:+32663691 | Msa0403140:CDS |
| GGACTTGGAACAATTAATGA+AGG | 0.548634 | 3_2:+32659683 | Msa0403140:intron |
| CCTTCTCAAATTTACTAGCA+AGG | 0.554709 | 3_2:-32656973 | None:intergenic |
| TTCAGTTAACTCATAGGGAA+GGG | 0.556887 | 3_2:+32658070 | Msa0403140:CDS |
| ATGGGTTGGAATCCTTAAAA+GGG | 0.558486 | 3_2:+32657199 | Msa0403140:CDS |
| CAAGGCTCAAACACTGGACA+TGG | 0.560433 | 3_2:-32663937 | None:intergenic |
| CAGTTGGCAAGGGAAAAGAA+AGG | 0.562244 | 3_2:+32660572 | Msa0403140:intron |
| TGCTGCTAAGTTGTCTGAAG+AGG | 0.562336 | 3_2:+32657006 | Msa0403140:CDS |
| TCCATTCATATACTTAATGT+GGG | 0.569079 | 3_2:+32663127 | Msa0403140:CDS |
| CAAACCTGGTTCAATTGGAC+CGG | 0.569962 | 3_2:-32662541 | None:intergenic |
| ACCTGGTTCAATTGGACCGG+TGG | 0.575977 | 3_2:-32662538 | None:intergenic |
| AACCATCAATTAGCACCTCA+AGG | 0.578304 | 3_2:-32663955 | None:intergenic |
| CCTTCTAATTCATATAAATG+AGG | 0.579496 | 3_2:-32660608 | None:intergenic |
| GGCAGCAGTTCAAAGAGTGG+AGG | 0.581141 | 3_2:+32658832 | Msa0403140:CDS |
| TGTCCAGTGTTTGAGCCTTG+AGG | 0.582661 | 3_2:+32663940 | Msa0403140:three_prime_UTR |
| CATAGTGTCACCAAAACTGC+GGG | 0.582763 | 3_2:-32656771 | None:intergenic |
| ATTAATGAAGGAGGTTCAAG+AGG | 0.588663 | 3_2:+32659695 | Msa0403140:CDS |
| GTTCAGTTAACTCATAGGGA+AGG | 0.590453 | 3_2:+32658069 | Msa0403140:CDS |
| TCAGTTAACTCATAGGGAAG+GGG | 0.591057 | 3_2:+32658071 | Msa0403140:CDS |
| ATGATGAGAGATACCTTGCT+TGG | 0.592908 | 3_2:-32659744 | None:intergenic |
| ATCCTTAAAAGGGCGAGTGG+CGG | 0.594151 | 3_2:+32657209 | Msa0403140:CDS |
| ATGATGTGAATCATTTGTCT+GGG | 0.597530 | 3_2:-32663095 | None:intergenic |
| ACATGTAATACAACAAAAGA+GGG | 0.599840 | 3_2:-32663753 | None:intergenic |
| GGCAAGGGAAAAGAAAGGAG+AGG | 0.600428 | 3_2:+32660577 | Msa0403140:CDS |
| CAGCTTTGTGGAGTTCGAGG+AGG | 0.602632 | 3_2:+32663390 | Msa0403140:intron |
| ATGCAGCTATCATGCTTGCA+AGG | 0.603055 | 3_2:+32663499 | Msa0403140:CDS |
| TGAGATTGTATGATGAGAAG+TGG | 0.603250 | 3_2:-32656571 | None:intergenic |
| TTTGTGGAGTTCGAGGAGGT+GGG | 0.607486 | 3_2:+32663394 | Msa0403140:CDS |
| CTTGGAACAATTAATGAAGG+AGG | 0.607672 | 3_2:+32659686 | Msa0403140:CDS |
| ACCACCGGTCCAATTGAACC+AGG | 0.610618 | 3_2:+32662537 | Msa0403140:CDS |
| TGACACTATGATGATGCATA+AGG | 0.614210 | 3_2:+32656784 | Msa0403140:CDS |
| GCATAAGGACGTGGTATCAG+CGG | 0.615444 | 3_2:+32656799 | Msa0403140:CDS |
| AGGGGAGCTAGTACAACAGA+AGG | 0.616255 | 3_2:+32658089 | Msa0403140:CDS |
| AATTTAGTTAGACACCAAGA+AGG | 0.620369 | 3_2:-32656541 | None:intergenic |
| CAGATCACACTGTCAACCAC+CGG | 0.621680 | 3_2:+32662522 | Msa0403140:CDS |
| ATGAGTTAACTGAACTGCAA+GGG | 0.627954 | 3_2:-32658061 | None:intergenic |
| GCTAGTACAACAGAAGGCTG+AGG | 0.635371 | 3_2:+32658095 | Msa0403140:CDS |
| TTGAACATTCTGAAAGTTCG+GGG | 0.637142 | 3_2:-32660682 | None:intergenic |
| TATGAGTTAACTGAACTGCA+AGG | 0.638190 | 3_2:-32658062 | None:intergenic |
| AATGCTGCATCAGCCAAGCA+AGG | 0.639243 | 3_2:+32659731 | Msa0403140:CDS |
| TTGAGGGACCAGTACTGGGG+CGG | 0.639407 | 3_2:+32656428 | None:intergenic |
| TCGAGGAGGTGGGAATGCTG+CGG | 0.640974 | 3_2:+32663404 | Msa0403140:CDS |
| CCGGGCAGCAGTTCAAAGAG+TGG | 0.642685 | 3_2:+32658829 | Msa0403140:CDS |
| TCCAACGTCAAAAGGTTCTG+GGG | 0.650573 | 3_2:-32662463 | None:intergenic |
| ACGTGAAACTGCACAGCTGT+TGG | 0.654010 | 3_2:+32656922 | Msa0403140:CDS |
| GGAATCCTTAAAAGGGCGAG+TGG | 0.655039 | 3_2:+32657206 | Msa0403140:CDS |
| ATAAAGGAATTCAGACCACA+AGG | 0.657475 | 3_2:-32663820 | None:intergenic |
| TGAACATTCTGAAAGTTCGG+GGG | 0.661686 | 3_2:-32660681 | None:intergenic |
| CAGCTATCATGCTTGCAAGG+AGG | 0.667212 | 3_2:+32663502 | Msa0403140:CDS |
| TATGATGATGCATAAGGACG+TGG | 0.671817 | 3_2:+32656790 | Msa0403140:CDS |
| TGGTTTGGGAAACTATGTAG+AGG | 0.678930 | 3_2:+32662735 | Msa0403140:CDS |
| TCATAGTGTCACCAAAACTG+CGG | 0.680285 | 3_2:-32656772 | None:intergenic |
| GAAAGTGCTATCGATGAAGG+AGG | 0.682437 | 3_2:+32656892 | Msa0403140:CDS |
| TGCTATGGAATCATACCTTG+TGG | 0.686461 | 3_2:+32663805 | Msa0403140:three_prime_UTR |
| CAGTTGAGGGACCAGTACTG+GGG | 0.697892 | 3_2:+32656425 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAATAATTTATAGAATTTT+AGG | + | chr3_2:32661571-32661590 | Msa0403140:intron | 10.0% |
| !!! | AATCATTGATTATTTCAATT+TGG | - | chr3_2:32657069-32657088 | None:intergenic | 15.0% |
| !!! | AATGATTATAATAATTTGCA+AGG | + | chr3_2:32657082-32657101 | Msa0403140:intron | 15.0% |
| !!! | ATTTCAAAGAACTTTTAATT+AGG | + | chr3_2:32657745-32657764 | Msa0403140:intron | 15.0% |
| !!! | TTTCAAAGAACTTTTAATTA+GGG | + | chr3_2:32657746-32657765 | Msa0403140:intron | 15.0% |
| !! | ACAATACTTCAATTATTTAT+CGG | - | chr3_2:32658307-32658326 | None:intergenic | 15.0% |
| !!! | TTTAATAAAATTTAGTTCTG+TGG | + | chr3_2:32659652-32659671 | Msa0403140:intron | 15.0% |
| !!! | TTAATAAAATTTAGTTCTGT+GGG | + | chr3_2:32659653-32659672 | Msa0403140:intron | 15.0% |
| !! | AAACAGAAAGAAAAAAAAAA+AGG | - | chr3_2:32659915-32659934 | None:intergenic | 15.0% |
| !! | TCATAAACAATAAACAAATA+TGG | - | chr3_2:32659981-32660000 | None:intergenic | 15.0% |
| !!! | ACTTTTTTATCATTATTTTG+AGG | + | chr3_2:32660271-32660290 | Msa0403140:intron | 15.0% |
| !!! | ATATTTTCTACAATAATGTT+TGG | - | chr3_2:32661495-32661514 | None:intergenic | 15.0% |
| !! | TTAAAAACAGTATTTATAAC+AGG | - | chr3_2:32663270-32663289 | None:intergenic | 15.0% |
| !!! | AATACTGTTTTTAACATTTT+CGG | + | chr3_2:32663276-32663295 | Msa0403140:intron | 15.0% |
| !!! | AATAGTTTTGCTTTTTTGAA+AGG | - | chr3_2:32656477-32656496 | None:intergenic | 20.0% |
| !! | TTATTTCAATTTGGAAAGTT+AGG | - | chr3_2:32657060-32657079 | None:intergenic | 20.0% |
| !! | ATGTTTATATTGTTTGATTG+TGG | + | chr3_2:32657111-32657130 | Msa0403140:intron | 20.0% |
| !! | TGTTTATATTGTTTGATTGT+GGG | + | chr3_2:32657112-32657131 | Msa0403140:intron | 20.0% |
| !!! | TTTTAAAGAAGATAAGAGAT+GGG | + | chr3_2:32657181-32657200 | Msa0403140:CDS | 20.0% |
| !!! | TTCAAAGAACTTTTAATTAG+GGG | + | chr3_2:32657747-32657766 | Msa0403140:intron | 20.0% |
| !! | CAATACTTCAATTATTTATC+GGG | - | chr3_2:32658306-32658325 | None:intergenic | 20.0% |
| !! | AACGTAAAGATCAAATAAAA+AGG | - | chr3_2:32658618-32658637 | None:intergenic | 20.0% |
| !! | TTTAATTCCTATTTGTGAAA+TGG | + | chr3_2:32658654-32658673 | Msa0403140:intron | 20.0% |
| !!! | TTTTGAAACTGATCAATTAA+TGG | + | chr3_2:32659014-32659033 | Msa0403140:intron | 20.0% |
| !!! | TGATTAAATTTTACGGAAAA+AGG | - | chr3_2:32659374-32659393 | None:intergenic | 20.0% |
| !! | GAGAATATACATAATGAAAA+AGG | - | chr3_2:32659476-32659495 | None:intergenic | 20.0% |
| !! | AAATATCAATTGATACATCA+CGG | - | chr3_2:32659599-32659618 | None:intergenic | 20.0% |
| !!! | TTCTTTCTGTTTTTTTGTTA+AGG | + | chr3_2:32659923-32659942 | Msa0403140:intron | 20.0% |
| !! | AGGGAAAAATATTATGATTA+TGG | + | chr3_2:32660149-32660168 | Msa0403140:intron | 20.0% |
| !! | CTCATTTATATGAATTAGAA+GGG | + | chr3_2:32660609-32660628 | Msa0403140:CDS | 20.0% |
| !!! | TTTGTTAATTTTCTCATTCT+GGG | - | chr3_2:32660934-32660953 | None:intergenic | 20.0% |
| !!! | TTTTGTTAATTTTCTCATTC+TGG | - | chr3_2:32660935-32660954 | None:intergenic | 20.0% |
| !!! | ACAAAATATCATTTTAGAAG+AGG | + | chr3_2:32660949-32660968 | Msa0403140:intron | 20.0% |
| !!! | CAAAATATCATTTTAGAAGA+GGG | + | chr3_2:32660950-32660969 | Msa0403140:intron | 20.0% |
| !! | AAAATCGAGAAAAAGTAATT+AGG | + | chr3_2:32660973-32660992 | Msa0403140:intron | 20.0% |
| !!! | TCTCTTTTTATAAACTAGAA+GGG | - | chr3_2:32661012-32661031 | None:intergenic | 20.0% |
| !!! | TTCTCTTTTTATAAACTAGA+AGG | - | chr3_2:32661013-32661032 | None:intergenic | 20.0% |
| !!! | AATTTTAGGAAACAAATGAT+AGG | + | chr3_2:32661585-32661604 | Msa0403140:intron | 20.0% |
| !!! | ATTTTAGGAAACAAATGATA+GGG | + | chr3_2:32661586-32661605 | Msa0403140:intron | 20.0% |
| !! | AAAAATAAATTACCCTAGTA+AGG | + | chr3_2:32662140-32662159 | Msa0403140:intron | 20.0% |
| !! | ATTGATGTTATATCATTATC+AGG | + | chr3_2:32662364-32662383 | Msa0403140:intron | 20.0% |
| !!! | ACAATCCTTTTAAATTTGTT+TGG | + | chr3_2:32662800-32662819 | Msa0403140:intron | 20.0% |
| !! | AAAGACCAAACAAATTTAAA+AGG | - | chr3_2:32662808-32662827 | None:intergenic | 20.0% |
| !! | TTGGTGAAAGAAAAATATAA+AGG | - | chr3_2:32663839-32663858 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAGGAAAAAGAGA+AGG | - | chr3_2:32656465-32656484 | None:intergenic | 25.0% |
| ! | TTACAGATTATGAGTAGTTA+AGG | - | chr3_2:32656598-32656617 | None:intergenic | 25.0% |
| ! | AAAAGAAGAAGAAAAGACAA+AGG | - | chr3_2:32656627-32656646 | None:intergenic | 25.0% |
| !! | TTAGATCCAATTTTGTAAGT+AGG | - | chr3_2:32656851-32656870 | None:intergenic | 25.0% |
| !!! | CTTTTAAAGAAGATAAGAGA+TGG | + | chr3_2:32657180-32657199 | Msa0403140:CDS | 25.0% |
| ! | TTTAGAGATTCTGATACATT+TGG | + | chr3_2:32657633-32657652 | Msa0403140:intron | 25.0% |
| !! | AAGTCTTTGAGAATGAATAA+TGG | + | chr3_2:32657860-32657879 | Msa0403140:intron | 25.0% |
| !! | AGTCTTTGAGAATGAATAAT+GGG | + | chr3_2:32657861-32657880 | Msa0403140:intron | 25.0% |
| ! | CATAAGCACAAATAAACTAA+TGG | - | chr3_2:32657982-32658001 | None:intergenic | 25.0% |
| !!! | AACTTCTTCAATCTCTTTTT+TGG | + | chr3_2:32658155-32658174 | Msa0403140:intron | 25.0% |
| ! | ATAGGAATTAAACATTGAGA+GGG | - | chr3_2:32658260-32658279 | None:intergenic | 25.0% |
| ! | AATAGGAATTAAACATTGAG+AGG | - | chr3_2:32658261-32658280 | None:intergenic | 25.0% |
| ! | ATTACACAGTTCTTTCAAAT+AGG | - | chr3_2:32658278-32658297 | None:intergenic | 25.0% |
| ! | ATAATATGCTTCACAATTTG+TGG | - | chr3_2:32658388-32658407 | None:intergenic | 25.0% |
| ! | GAAAGAAAGAGTTGAATAAT+CGG | + | chr3_2:32658416-32658435 | Msa0403140:intron | 25.0% |
| ! | AAAGAATCCATTTCACAAAT+AGG | - | chr3_2:32658664-32658683 | None:intergenic | 25.0% |
| ! | ATCCTTCAAAGTTAAAAGTT+GGG | - | chr3_2:32658937-32658956 | None:intergenic | 25.0% |
| ! | AATCCTTCAAAGTTAAAAGT+TGG | - | chr3_2:32658938-32658957 | None:intergenic | 25.0% |
| !!! | ACTTTTAACTTTGAAGGATT+AGG | + | chr3_2:32658938-32658957 | Msa0403140:intron | 25.0% |
| ! | ATTAATGGAATGAGAAATTG+TGG | + | chr3_2:32659029-32659048 | Msa0403140:intron | 25.0% |
| ! | TGTCTTGAAATAATTCTGTT+GGG | + | chr3_2:32659160-32659179 | Msa0403140:intron | 25.0% |
| ! | AAAAGAAACAAGCAAAAATC+TGG | - | chr3_2:32659237-32659256 | None:intergenic | 25.0% |
| ! | TAAATTTGTGGAGAAATTTG+TGG | + | chr3_2:32659311-32659330 | Msa0403140:intron | 25.0% |
| !! | TAATCATTTTATTGCTTCTC+TGG | + | chr3_2:32659388-32659407 | Msa0403140:intron | 25.0% |
| ! | CTCTTCAATAATCAAAATAC+TGG | + | chr3_2:32659537-32659556 | Msa0403140:intron | 25.0% |
| ! | TTACTATTGAAAGATATCAG+CGG | - | chr3_2:32660061-32660080 | None:intergenic | 25.0% |
| !!! | TTGATTTCTGATTGACTTTT+AGG | + | chr3_2:32660306-32660325 | Msa0403140:intron | 25.0% |
| ! | ACGTTTCTTTGATTAAATTG+AGG | + | chr3_2:32660492-32660511 | Msa0403140:intron | 25.0% |
| ! | AAATCAGTGATAACTTAGAA+TGG | - | chr3_2:32660535-32660554 | None:intergenic | 25.0% |
| ! | CCTTCTAATTCATATAAATG+AGG | - | chr3_2:32660611-32660630 | None:intergenic | 25.0% |
| ! | CCTCATTTATATGAATTAGA+AGG | + | chr3_2:32660608-32660627 | Msa0403140:CDS | 25.0% |
| !! | AATTGAACATTCTGAAAGTT+CGG | - | chr3_2:32660687-32660706 | None:intergenic | 25.0% |
| !!! | GTTTCTATTTTGCTTTTCAA+GGG | + | chr3_2:32660805-32660824 | Msa0403140:intron | 25.0% |
| ! | AGAAAGAAACCAAGAATATA+GGG | + | chr3_2:32661029-32661048 | Msa0403140:intron | 25.0% |
| ! | AAGAATATAGGGGATATTAA+GGG | + | chr3_2:32661040-32661059 | Msa0403140:intron | 25.0% |
| ! | AGGATATCAGAAAGTTTATA+AGG | + | chr3_2:32661261-32661280 | Msa0403140:intron | 25.0% |
| ! | GGATATCAGAAAGTTTATAA+GGG | + | chr3_2:32661262-32661281 | Msa0403140:intron | 25.0% |
| ! | AAAGTTTATAAGGGAATTCT+TGG | + | chr3_2:32661271-32661290 | Msa0403140:intron | 25.0% |
| ! | CGTTACTAGATGAATTAAAA+TGG | - | chr3_2:32661364-32661383 | None:intergenic | 25.0% |
| ! | CATAACAATTTCTGTTTGTA+AGG | + | chr3_2:32661394-32661413 | Msa0403140:intron | 25.0% |
| !!! | GTATTTCTTCTACCTTTTTT+TGG | + | chr3_2:32661467-32661486 | Msa0403140:intron | 25.0% |
| !! | TAATGTTTGGAACCAAAAAA+AGG | - | chr3_2:32661482-32661501 | None:intergenic | 25.0% |
| ! | TCCAATTATATCTTTAGATG+CGG | - | chr3_2:32661806-32661825 | None:intergenic | 25.0% |
| ! | AGTTATACTTTGTGTCATAT+CGG | + | chr3_2:32661847-32661866 | Msa0403140:intron | 25.0% |
| ! | TTCAAGGTATATATTCCATT+CGG | - | chr3_2:32661891-32661910 | None:intergenic | 25.0% |
| !! | TGATAATTGACTCTGTTTAA+GGG | - | chr3_2:32661988-32662007 | None:intergenic | 25.0% |
| !! | ATGATAATTGACTCTGTTTA+AGG | - | chr3_2:32661989-32662008 | None:intergenic | 25.0% |
| ! | ATACTTGTAAGTTCATGAAT+AGG | - | chr3_2:32662059-32662078 | None:intergenic | 25.0% |
| ! | TACATATTTGTGCAAGTTAA+TGG | - | chr3_2:32662328-32662347 | None:intergenic | 25.0% |
| !! | TAACTTGCACAAATATGTAA+AGG | + | chr3_2:32662329-32662348 | Msa0403140:intron | 25.0% |
| ! | ACAAAAACGTGTTACATAAA+AGG | - | chr3_2:32662414-32662433 | None:intergenic | 25.0% |
| ! | CAAGTTTGTATTATTTCAGA+AGG | + | chr3_2:32662495-32662514 | Msa0403140:CDS | 25.0% |
| ! | TATTAAGTAGTCAACAAGAA+TGG | + | chr3_2:32662590-32662609 | Msa0403140:intron | 25.0% |
| ! | CAAATTATAAGAGGGAAAAA+AGG | - | chr3_2:32662831-32662850 | None:intergenic | 25.0% |
| !! | TGCTTTTGCAAATTATAAGA+GGG | - | chr3_2:32662839-32662858 | None:intergenic | 25.0% |
| !! | ATGCTTTTGCAAATTATAAG+AGG | - | chr3_2:32662840-32662859 | None:intergenic | 25.0% |
| ! | AGTTATATTCAATACTTTGC+AGG | + | chr3_2:32663063-32663082 | Msa0403140:intron | 25.0% |
| ! | ATCCATTCATATACTTAATG+TGG | + | chr3_2:32663126-32663145 | Msa0403140:CDS | 25.0% |
| ! | TCCATTCATATACTTAATGT+GGG | + | chr3_2:32663127-32663146 | Msa0403140:CDS | 25.0% |
| ! | AAACTAATGCCATATTTGTT+AGG | + | chr3_2:32663581-32663600 | Msa0403140:intron | 25.0% |
| ! | TGCTAAAATCCTAACAAATA+TGG | - | chr3_2:32663593-32663612 | None:intergenic | 25.0% |
| ! | ACATGTAATACAACAAAAGA+GGG | - | chr3_2:32663756-32663775 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTGTATTACATGT+GGG | + | chr3_2:32663756-32663775 | Msa0403140:three_prime_UTR | 25.0% |
| !! | GAAAGTTTAGAGTACAATTA+TGG | + | chr3_2:32663902-32663921 | Msa0403140:three_prime_UTR | 25.0% |
| AATTTAGTTAGACACCAAGA+AGG | - | chr3_2:32656544-32656563 | None:intergenic | 30.0% | |
| !! | TTCATTTTTGTGATTTGCAG+AGG | + | chr3_2:32656719-32656738 | Msa0403140:intron | 30.0% |
| CGATTTCCTACTTACAAAAT+TGG | + | chr3_2:32656842-32656861 | Msa0403140:CDS | 30.0% | |
| TGGATCTAATAATCAGATCA+TGG | + | chr3_2:32656862-32656881 | Msa0403140:CDS | 30.0% | |
| CTTGCTAGTAAATTTGAGAA+GGG | + | chr3_2:32656974-32656993 | Msa0403140:CDS | 30.0% | |
| TAGTAAATTTGAGAAGGGTT+TGG | + | chr3_2:32656979-32656998 | Msa0403140:CDS | 30.0% | |
| !! | TGTTCATGAAGCTATTTCTT+TGG | + | chr3_2:32657248-32657267 | Msa0403140:intron | 30.0% |
| ! | AGAGATTATCAAAGAAGCAT+AGG | - | chr3_2:32657286-32657305 | None:intergenic | 30.0% |
| ACTCTTTAACAATGACAATG+CGG | - | chr3_2:32657332-32657351 | None:intergenic | 30.0% | |
| !! | AAAGAACTTTTAATTAGGGG+TGG | + | chr3_2:32657750-32657769 | Msa0403140:intron | 30.0% |
| !! | AAGAACTTTTAATTAGGGGT+GGG | + | chr3_2:32657751-32657770 | Msa0403140:intron | 30.0% |
| ! | GCTAACAAATTTTCTTAAGC+AGG | + | chr3_2:32658125-32658144 | Msa0403140:CDS | 30.0% |
| TAATCTGTCTATTGACCTAT+TGG | + | chr3_2:32658539-32658558 | Msa0403140:intron | 30.0% | |
| ! | CAAAGAAATTTCCTTTTCCA+AGG | + | chr3_2:32658714-32658733 | Msa0403140:intron | 30.0% |
| GAGTATCTAGATTCATTTGT+AGG | + | chr3_2:32658739-32658758 | Msa0403140:intron | 30.0% | |
| TGCTAAGAAACTTGTATATG+AGG | + | chr3_2:32658772-32658791 | Msa0403140:CDS | 30.0% | |
| !!! | GTTTTGAAATAGATAATGCC+CGG | + | chr3_2:32658810-32658829 | Msa0403140:CDS | 30.0% |
| !!! | TTTTGAAATAGATAATGCCC+GGG | + | chr3_2:32658811-32658830 | Msa0403140:CDS | 30.0% |
| AAAAGGAAATACAATGAACC+TGG | - | chr3_2:32658901-32658920 | None:intergenic | 30.0% | |
| TGGGAAACATAAATGACAAA+AGG | - | chr3_2:32658918-32658937 | None:intergenic | 30.0% | |
| !!! | TTCCCAACTTTTAACTTTGA+AGG | + | chr3_2:32658932-32658951 | Msa0403140:intron | 30.0% |
| TTTCTACTTGTACTTCTGAA+TGG | + | chr3_2:32659078-32659097 | Msa0403140:intron | 30.0% | |
| CTGTCTTGAAATAATTCTGT+TGG | + | chr3_2:32659159-32659178 | Msa0403140:intron | 30.0% | |
| AAGTGCAAGATATTCTATGA+AGG | + | chr3_2:32660102-32660121 | Msa0403140:intron | 30.0% | |
| ! | TATTCTATGAAGGTGTAGAA+TGG | + | chr3_2:32660112-32660131 | Msa0403140:intron | 30.0% |
| !! | AAAGAAGGGTATTTCAACAA+AGG | - | chr3_2:32660212-32660231 | None:intergenic | 30.0% |
| ! | AAAGAAAGTAGTGGAAAGAA+GGG | - | chr3_2:32660226-32660245 | None:intergenic | 30.0% |
| !!! | TCTGATTGACTTTTAGGTTA+TGG | + | chr3_2:32660312-32660331 | Msa0403140:intron | 30.0% |
| !!! | TGACTTTTAGGTTATGGATA+TGG | + | chr3_2:32660318-32660337 | Msa0403140:intron | 30.0% |
| TTATATTCGACTCCAAAAAG+AGG | + | chr3_2:32660390-32660409 | Msa0403140:CDS | 30.0% | |
| TCAAAATGGCATAACATGAT+AGG | - | chr3_2:32660420-32660439 | None:intergenic | 30.0% | |
| ! | ATTGAACATTCTGAAAGTTC+GGG | - | chr3_2:32660686-32660705 | None:intergenic | 30.0% |
| TTTCAGAATGTTCAATTCAG+TGG | + | chr3_2:32660690-32660709 | Msa0403140:CDS | 30.0% | |
| !! | AAGTTCCTTTTTGGCATTTT+CGG | - | chr3_2:32660729-32660748 | None:intergenic | 30.0% |
| ! | ACCTGAAATAAGTTCCTTTT+TGG | - | chr3_2:32660738-32660757 | None:intergenic | 30.0% |
| !! | GGTTTCTATTTTGCTTTTCA+AGG | + | chr3_2:32660804-32660823 | Msa0403140:intron | 30.0% |
| !! | TTTCTACTTTTATCTACCTC+TGG | + | chr3_2:32660870-32660889 | Msa0403140:intron | 30.0% |
| GAGAAAGAAACCAAGAATAT+AGG | + | chr3_2:32661028-32661047 | Msa0403140:intron | 30.0% | |
| GAAAGAAACCAAGAATATAG+GGG | + | chr3_2:32661030-32661049 | Msa0403140:intron | 30.0% | |
| CTTAATATCCCCTATATTCT+TGG | - | chr3_2:32661041-32661060 | None:intergenic | 30.0% | |
| CAAGAATATAGGGGATATTA+AGG | + | chr3_2:32661039-32661058 | Msa0403140:intron | 30.0% | |
| AGAATATAGGGGATATTAAG+GGG | + | chr3_2:32661041-32661060 | Msa0403140:intron | 30.0% | |
| GACATGTATAATTGGTTGAA+GGG | + | chr3_2:32661069-32661088 | Msa0403140:intron | 30.0% | |
| ACATGTATAATTGGTTGAAG+GGG | + | chr3_2:32661070-32661089 | Msa0403140:intron | 30.0% | |
| AGAGATAACAGAAAAAGAAC+AGG | + | chr3_2:32661151-32661170 | Msa0403140:intron | 30.0% | |
| ! | TTATGTCTTATTCATCAGTC+AGG | + | chr3_2:32661528-32661547 | Msa0403140:intron | 30.0% |
| CCAATTATATCTTTAGATGC+GGG | - | chr3_2:32661805-32661824 | None:intergenic | 30.0% | |
| GATATATAATTGCTCCAAAG+AGG | + | chr3_2:32661824-32661843 | Msa0403140:intron | 30.0% | |
| TTCGGCTAATTCAAAGAATT+TGG | - | chr3_2:32661873-32661892 | None:intergenic | 30.0% | |
| AATTCTTTGAATTAGCCGAA+TGG | + | chr3_2:32661873-32661892 | Msa0403140:intron | 30.0% | |
| CTTTACATGTTCACTTTGTT+TGG | + | chr3_2:32662083-32662102 | Msa0403140:intron | 30.0% | |
| GTTTGGCATAGATTGTAATA+CGG | + | chr3_2:32662100-32662119 | Msa0403140:intron | 30.0% | |
| !!! | GGGTAATTTATTTTTGAAGC+AGG | - | chr3_2:32662135-32662154 | None:intergenic | 30.0% |
| CTGATTTACTATCCTTACTA+GGG | - | chr3_2:32662155-32662174 | None:intergenic | 30.0% | |
| TCTGATTTACTATCCTTACT+AGG | - | chr3_2:32662156-32662175 | None:intergenic | 30.0% | |
| AATGTCATAATGTCTCCTAT+AGG | - | chr3_2:32662223-32662242 | None:intergenic | 30.0% | |
| AACGTGTTACATAAAAGGAA+AGG | - | chr3_2:32662409-32662428 | None:intergenic | 30.0% | |
| GTCTTGTCAATTCAAAGAAA+TGG | + | chr3_2:32662652-32662671 | Msa0403140:intron | 30.0% | |
| !! | TTTTATTTGTTTTCAGCTGC+TGG | + | chr3_2:32662715-32662734 | Msa0403140:intron | 30.0% |
| !! | AGGTTTATTATAAGCATCGA+TGG | - | chr3_2:32662939-32662958 | None:intergenic | 30.0% |
| CAAAACTAGACACTAATTGA+AGG | - | chr3_2:32662959-32662978 | None:intergenic | 30.0% | |
| !! | CTTCAATTAGTGTCTAGTTT+TGG | + | chr3_2:32662957-32662976 | Msa0403140:intron | 30.0% |
| ATTACTATTGTCACTGAATC+TGG | - | chr3_2:32663043-32663062 | None:intergenic | 30.0% | |
| TATATTCAATACTTTGCAGG+TGG | + | chr3_2:32663066-32663085 | Msa0403140:intron | 30.0% | |
| ATGATGTGAATCATTTGTCT+GGG | - | chr3_2:32663098-32663117 | None:intergenic | 30.0% | |
| ! | AGTATATGAATGGATTCAGT+TGG | - | chr3_2:32663121-32663140 | None:intergenic | 30.0% |
| TCCCACATTAAGTATATGAA+TGG | - | chr3_2:32663131-32663150 | None:intergenic | 30.0% | |
| ! | ATGAGAATGAAGCTTTGTAA+AGG | + | chr3_2:32663154-32663173 | Msa0403140:CDS | 30.0% |
| ! | TGAGAATGAAGCTTTGTAAA+GGG | + | chr3_2:32663155-32663174 | Msa0403140:CDS | 30.0% |
| TGAACTCGAATAGAATTCTT+TGG | - | chr3_2:32663194-32663213 | None:intergenic | 30.0% | |
| !!! | ACTGTTTTTAACATTTTCGG+TGG | + | chr3_2:32663279-32663298 | Msa0403140:intron | 30.0% |
| !! | AGGTATTGGAAATTTAGCAA+TGG | - | chr3_2:32663637-32663656 | None:intergenic | 30.0% |
| ACAATCTGCAATTAAGGTAT+TGG | - | chr3_2:32663651-32663670 | None:intergenic | 30.0% | |
| CACATGTAATACAACAAAAG+AGG | - | chr3_2:32663757-32663776 | None:intergenic | 30.0% | |
| !! | CTCTTTTGTTGTATTACATG+TGG | + | chr3_2:32663755-32663774 | Msa0403140:three_prime_UTR | 30.0% |
| ! | TATGCCTTTTTATTGTGCTA+TGG | + | chr3_2:32663790-32663809 | Msa0403140:three_prime_UTR | 30.0% |
| GATTCCATAGCACAATAAAA+AGG | - | chr3_2:32663797-32663816 | None:intergenic | 30.0% | |
| ! | ATTTTTCTTTCACCAACAGT+AGG | + | chr3_2:32663843-32663862 | Msa0403140:three_prime_UTR | 30.0% |
| ! | TTTTTCTTTCACCAACAGTA+GGG | + | chr3_2:32663844-32663863 | Msa0403140:three_prime_UTR | 30.0% |
| TTCATCAACTATCACTCATA+AGG | - | chr3_2:32663885-32663904 | None:intergenic | 30.0% | |
| TTAGAGTACAATTATGGAGT+TGG | + | chr3_2:32663908-32663927 | Msa0403140:three_prime_UTR | 30.0% | |
| TGAGATTGTATGATGAGAAG+TGG | - | chr3_2:32656574-32656593 | None:intergenic | 35.0% | |
| ATACTTCGCGAAAAATGACA+AGG | + | chr3_2:32656744-32656763 | Msa0403140:exon | 35.0% | |
| ! | TGACACTATGATGATGCATA+AGG | + | chr3_2:32656784-32656803 | Msa0403140:CDS | 35.0% |
| CCTTCTCAAATTTACTAGCA+AGG | - | chr3_2:32656976-32656995 | None:intergenic | 35.0% | |
| CCTTGCTAGTAAATTTGAGA+AGG | + | chr3_2:32656973-32656992 | Msa0403140:CDS | 35.0% | |
| ATTGTTTGATTGTGGGATTC+AGG | + | chr3_2:32657119-32657138 | Msa0403140:intron | 35.0% | |
| AAAGAAGATAAGAGATGGGT+TGG | + | chr3_2:32657185-32657204 | Msa0403140:CDS | 35.0% | |
| !! | ATGGGTTGGAATCCTTAAAA+GGG | + | chr3_2:32657199-32657218 | Msa0403140:CDS | 35.0% |
| GACTCTTAGAAATCATGGTT+GGG | - | chr3_2:32657438-32657457 | None:intergenic | 35.0% | |
| ATCACGACTCTTAGAAATCA+TGG | - | chr3_2:32657443-32657462 | None:intergenic | 35.0% | |
| !! | AACATGGCATTGGTTGTAAA+GGG | - | chr3_2:32657504-32657523 | None:intergenic | 35.0% |
| ! | TCTGATACATTTGGTGACTA+CGG | + | chr3_2:32657642-32657661 | Msa0403140:intron | 35.0% |
| !! | AAAGTTCTTTGAAATCACGC+TGG | - | chr3_2:32657740-32657759 | None:intergenic | 35.0% |
| !! | AGAACTTTTAATTAGGGGTG+GGG | + | chr3_2:32657752-32657771 | Msa0403140:intron | 35.0% |
| ATGGAGACAGAGTAGAATTA+TGG | + | chr3_2:32657809-32657828 | Msa0403140:intron | 35.0% | |
| TGGAGACAGAGTAGAATTAT+GGG | + | chr3_2:32657810-32657829 | Msa0403140:intron | 35.0% | |
| AGAGTAGAATTATGGGAGAA+TGG | + | chr3_2:32657817-32657836 | Msa0403140:intron | 35.0% | |
| ATGAGTTAACTGAACTGCAA+GGG | - | chr3_2:32658064-32658083 | None:intergenic | 35.0% | |
| TATGAGTTAACTGAACTGCA+AGG | - | chr3_2:32658065-32658084 | None:intergenic | 35.0% | |
| TTGCAGTTCAGTTAACTCAT+AGG | + | chr3_2:32658064-32658083 | Msa0403140:CDS | 35.0% | |
| TGCAGTTCAGTTAACTCATA+GGG | + | chr3_2:32658065-32658084 | Msa0403140:CDS | 35.0% | |
| TTCAGTTAACTCATAGGGAA+GGG | + | chr3_2:32658070-32658089 | Msa0403140:CDS | 35.0% | |
| ACAATGACACTAATGTCAAG+AGG | + | chr3_2:32658227-32658246 | Msa0403140:intron | 35.0% | |
| GAATTAAACATTGAGAGGGT+TGG | - | chr3_2:32658256-32658275 | None:intergenic | 35.0% | |
| GACAAATTAGACAGTCCAAT+AGG | - | chr3_2:32658557-32658576 | None:intergenic | 35.0% | |
| ! | ATTGGACTGTCTAATTTGTC+TGG | + | chr3_2:32658557-32658576 | Msa0403140:intron | 35.0% |
| ! | TTGGACTGTCTAATTTGTCT+GGG | + | chr3_2:32658558-32658577 | Msa0403140:intron | 35.0% |
| TCTGGGAATGAAACACTAAT+GGG | + | chr3_2:32658575-32658594 | Msa0403140:intron | 35.0% | |
| CAACTCAAATCCTCTATACT+TGG | + | chr3_2:32658686-32658705 | Msa0403140:intron | 35.0% | |
| CTTTGTAAAGCCAAGTATAG+AGG | - | chr3_2:32658699-32658718 | None:intergenic | 35.0% | |
| ! | GGATCTTCCTTTTGACATAA+TGG | + | chr3_2:32658959-32658978 | Msa0403140:intron | 35.0% |
| ACACTTGCCATTATGTCAAA+AGG | - | chr3_2:32658969-32658988 | None:intergenic | 35.0% | |
| TTGTACTTCTGAATGGTTCA+TGG | + | chr3_2:32659085-32659104 | Msa0403140:intron | 35.0% | |
| ATATTTCCATCTAACTACGC+AGG | + | chr3_2:32659111-32659130 | Msa0403140:intron | 35.0% | |
| TTTCAAACCAAAGGAGAAAG+TGG | - | chr3_2:32659203-32659222 | None:intergenic | 35.0% | |
| GATCATGCGACATAAATTTG+TGG | + | chr3_2:32659299-32659318 | Msa0403140:intron | 35.0% | |
| GGACTTGGAACAATTAATGA+AGG | + | chr3_2:32659683-32659702 | Msa0403140:intron | 35.0% | |
| CTTGGAACAATTAATGAAGG+AGG | + | chr3_2:32659686-32659705 | Msa0403140:CDS | 35.0% | |
| ATTAATGAAGGAGGTTCAAG+AGG | + | chr3_2:32659695-32659714 | Msa0403140:CDS | 35.0% | |
| AACTACAACCACAAACAAGA+GGG | - | chr3_2:32659795-32659814 | None:intergenic | 35.0% | |
| TCTTTGGTTGTGAAATCGTT+AGG | + | chr3_2:32659830-32659849 | Msa0403140:intron | 35.0% | |
| CAAATATGGCACTATTGTGA+GGG | - | chr3_2:32659967-32659986 | None:intergenic | 35.0% | |
| ACAAATATGGCACTATTGTG+AGG | - | chr3_2:32659968-32659987 | None:intergenic | 35.0% | |
| ! | AATGGATTCAGAGCATTTCA+GGG | + | chr3_2:32660130-32660149 | Msa0403140:intron | 35.0% |
| ! | CAAAGAAAGTAGTGGAAAGA+AGG | - | chr3_2:32660227-32660246 | None:intergenic | 35.0% |
| ! | ATGATAGGCATACCTCTTTT+TGG | - | chr3_2:32660405-32660424 | None:intergenic | 35.0% |
| !!! | CATGTTATGCCATTTTGAAG+AGG | + | chr3_2:32660422-32660441 | Msa0403140:intron | 35.0% |
| CAATCACAACCTCTTCAAAA+TGG | - | chr3_2:32660434-32660453 | None:intergenic | 35.0% | |
| !! | CTTCCATTTCACTTTTCAGT+TGG | + | chr3_2:32660556-32660575 | Msa0403140:intron | 35.0% |
| TTGCCAACTGAAAAGTGAAA+TGG | - | chr3_2:32660562-32660581 | None:intergenic | 35.0% | |
| !! | ATTTCACTTTTCAGTTGGCA+AGG | + | chr3_2:32660561-32660580 | Msa0403140:intron | 35.0% |
| !! | TTTCACTTTTCAGTTGGCAA+GGG | + | chr3_2:32660562-32660581 | Msa0403140:intron | 35.0% |
| TTAGAAGGGACTGAAACATT+AGG | + | chr3_2:32660623-32660642 | Msa0403140:CDS | 35.0% | |
| ! | TTGAACATTCTGAAAGTTCG+GGG | - | chr3_2:32660685-32660704 | None:intergenic | 35.0% |
| !! | AGTTCCTTTTTGGCATTTTC+GGG | - | chr3_2:32660728-32660747 | None:intergenic | 35.0% |
| GCCAAAAAGGAACTTATTTC+AGG | + | chr3_2:32660734-32660753 | Msa0403140:CDS | 35.0% | |
| CAAAAAAATTGCACTGTGCT+GGG | + | chr3_2:32660766-32660785 | Msa0403140:intron | 35.0% | |
| TATCTACCTCTGGTATATTG+TGG | + | chr3_2:32660880-32660899 | Msa0403140:intron | 35.0% | |
| GGGACAAGTAAAATGAATGA+TGG | - | chr3_2:32660914-32660933 | None:intergenic | 35.0% | |
| GGACATGTATAATTGGTTGA+AGG | + | chr3_2:32661068-32661087 | Msa0403140:intron | 35.0% | |
| CATGTATAATTGGTTGAAGG+GGG | + | chr3_2:32661071-32661090 | Msa0403140:intron | 35.0% | |
| ATGTATAATTGGTTGAAGGG+GGG | + | chr3_2:32661072-32661091 | Msa0403140:intron | 35.0% | |
| GATAACAGAAAAAGAACAGG+TGG | + | chr3_2:32661154-32661173 | Msa0403140:intron | 35.0% | |
| AAGTGAGAAGGACTATATGA+AGG | + | chr3_2:32661223-32661242 | Msa0403140:intron | 35.0% | |
| AGTGAGAAGGACTATATGAA+GGG | + | chr3_2:32661224-32661243 | Msa0403140:intron | 35.0% | |
| TATAAGGGAATTCTTGGACT+AGG | + | chr3_2:32661277-32661296 | Msa0403140:intron | 35.0% | |
| ATATCTATGCACCAACTTGA+TGG | - | chr3_2:32661674-32661693 | None:intergenic | 35.0% | |
| GCTTCTCAAATGCTCAAAAA+CGG | + | chr3_2:32661710-32661729 | Msa0403140:intron | 35.0% | |
| CTTCTCAAATGCTCAAAAAC+GGG | + | chr3_2:32661711-32661730 | Msa0403140:intron | 35.0% | |
| ! | TGTTGACTAGAAGTCACAAA+AGG | + | chr3_2:32661768-32661787 | Msa0403140:intron | 35.0% |
| CCCGCATCTAAAGATATAAT+TGG | + | chr3_2:32661802-32661821 | Msa0403140:intron | 35.0% | |
| CACAAAGTATAACTCCTCTT+TGG | - | chr3_2:32661841-32661860 | None:intergenic | 35.0% | |
| ! | ATGGAATACTGGAAAGCATA+TGG | - | chr3_2:32662013-32662032 | None:intergenic | 35.0% |
| GTTCATGAATAGGTGAGATT+CGG | - | chr3_2:32662049-32662068 | None:intergenic | 35.0% | |
| AAAGATAGTCCAATCACTAG+AGG | + | chr3_2:32662178-32662197 | Msa0403140:intron | 35.0% | |
| ! | ATGTCTCCTATAGGTGTTTT+CGG | - | chr3_2:32662214-32662233 | None:intergenic | 35.0% |
| ! | TAACACGTTTTTGTGTTCTC+AGG | + | chr3_2:32662420-32662439 | Msa0403140:intron | 35.0% |
| ACTTGATTGGACAGAAAAAC+AGG | - | chr3_2:32662679-32662698 | None:intergenic | 35.0% | |
| !! | TTTTCTGTCCAATCAAGTTG+AGG | + | chr3_2:32662681-32662700 | Msa0403140:intron | 35.0% |
| CAGTTTAACCTCAACTTGAT+TGG | - | chr3_2:32662692-32662711 | None:intergenic | 35.0% | |
| TCATCGCTTGTTCTTGTATA+TGG | + | chr3_2:32662911-32662930 | Msa0403140:intron | 35.0% | |
| GATGATGTGAATCATTTGTC+TGG | - | chr3_2:32663099-32663118 | None:intergenic | 35.0% | |
| ! | ATTCTATTCGAGTTCAATGC+AGG | + | chr3_2:32663198-32663217 | Msa0403140:CDS | 35.0% |
| GGGAGAGGAAAATATCAAAA+TGG | - | chr3_2:32663309-32663328 | None:intergenic | 35.0% | |
| !!! | TCTTGTTTTCTTCAGCTTTG+TGG | + | chr3_2:32663378-32663397 | Msa0403140:intron | 35.0% |
| CATTTGAATCAGAGAGAGAA+AGG | + | chr3_2:32663475-32663494 | Msa0403140:CDS | 35.0% | |
| GCTAGAACAATCTGCAATTA+AGG | - | chr3_2:32663657-32663676 | None:intergenic | 35.0% | |
| TAATTGCAGATTGTTCTAGC+TGG | + | chr3_2:32663657-32663676 | Msa0403140:intron | 35.0% | |
| AAACTCCTTCAGAAACATGA+TGG | + | chr3_2:32663691-32663710 | Msa0403140:CDS | 35.0% | |
| ATAAAGGAATTCAGACCACA+AGG | - | chr3_2:32663823-32663842 | None:intergenic | 35.0% | |
| CAAAAAAAATGCCCTACTGT+TGG | - | chr3_2:32663858-32663877 | None:intergenic | 35.0% | |
| TCATAGTGTCACCAAAACTG+CGG | - | chr3_2:32656775-32656794 | None:intergenic | 40.0% | |
| ! | TATGATGATGCATAAGGACG+TGG | + | chr3_2:32656790-32656809 | Msa0403140:CDS | 40.0% |
| TCCTTCATCGATAGCACTTT+CGG | - | chr3_2:32656893-32656912 | None:intergenic | 40.0% | |
| !! | GATGGGTTGGAATCCTTAAA+AGG | + | chr3_2:32657198-32657217 | Msa0403140:CDS | 40.0% |
| ACAAAAGATGGCCTGAACAT+GGG | + | chr3_2:32657368-32657387 | Msa0403140:intron | 40.0% | |
| CTAACACAACCTCACTAAAC+CGG | - | chr3_2:32657414-32657433 | None:intergenic | 40.0% | |
| CGACTCTTAGAAATCATGGT+TGG | - | chr3_2:32657439-32657458 | None:intergenic | 40.0% | |
| TCTCTTGACTGCGATATATC+TGG | + | chr3_2:32657467-32657486 | Msa0403140:intron | 40.0% | |
| !! | CAACATGGCATTGGTTGTAA+AGG | - | chr3_2:32657505-32657524 | None:intergenic | 40.0% |
| GAATTATGGGAGAATGGATG+AGG | + | chr3_2:32657823-32657842 | Msa0403140:intron | 40.0% | |
| TACAGTAGTGTTCAATCTGC+AGG | + | chr3_2:32658032-32658051 | Msa0403140:intron | 40.0% | |
| GTTCAGTTAACTCATAGGGA+AGG | + | chr3_2:32658069-32658088 | Msa0403140:CDS | 40.0% | |
| TCAGTTAACTCATAGGGAAG+GGG | + | chr3_2:32658071-32658090 | Msa0403140:CDS | 40.0% | |
| AAGCATTCAGCTTCAACCAA+AGG | + | chr3_2:32658343-32658362 | Msa0403140:intron | 40.0% | |
| TGTGCAATTTGTGATGCCTT+TGG | - | chr3_2:32658362-32658381 | None:intergenic | 40.0% | |
| GTCTGGGAATGAAACACTAA+TGG | + | chr3_2:32658574-32658593 | Msa0403140:intron | 40.0% | |
| TAGATACTCAGCCTTGGAAA+AGG | - | chr3_2:32658728-32658747 | None:intergenic | 40.0% | |
| TGAATCTAGATACTCAGCCT+TGG | - | chr3_2:32658734-32658753 | None:intergenic | 40.0% | |
| GATTCATTTGTAGGCTTCTG+AGG | + | chr3_2:32658748-32658767 | Msa0403140:intron | 40.0% | |
| GAGAGAATGTCTCAAACTTC+AGG | + | chr3_2:32658872-32658891 | Msa0403140:CDS | 40.0% | |
| TACTTCTGAATGGTTCATGG+TGG | + | chr3_2:32659088-32659107 | Msa0403140:intron | 40.0% | |
| TTAAAGCCTGCGTAGTTAGA+TGG | - | chr3_2:32659120-32659139 | None:intergenic | 40.0% | |
| ! | TTTTCGACCACTTTCTCCTT+TGG | + | chr3_2:32659193-32659212 | Msa0403140:intron | 40.0% |
| CGTAACAGCTTTCAAACCAA+AGG | - | chr3_2:32659212-32659231 | None:intergenic | 40.0% | |
| TTCTCTGGTGATTTAGTGCA+TGG | + | chr3_2:32659403-32659422 | Msa0403140:intron | 40.0% | |
| TCTCTGGTGATTTAGTGCAT+GGG | + | chr3_2:32659404-32659423 | Msa0403140:intron | 40.0% | |
| !! | TTTAGTTCTGTGGGTTCTGT+AGG | + | chr3_2:32659662-32659681 | Msa0403140:intron | 40.0% |
| ATGATGAGAGATACCTTGCT+TGG | - | chr3_2:32659747-32659766 | None:intergenic | 40.0% | |
| ! | TTGAAACACCCTCTTGTTTG+TGG | + | chr3_2:32659784-32659803 | Msa0403140:intron | 40.0% |
| GAACTACAACCACAAACAAG+AGG | - | chr3_2:32659796-32659815 | None:intergenic | 40.0% | |
| TTCACAACCAAAGAGAGGTA+AGG | - | chr3_2:32659824-32659843 | None:intergenic | 40.0% | |
| ACGATTTCACAACCAAAGAG+AGG | - | chr3_2:32659829-32659848 | None:intergenic | 40.0% | |
| ! | GAATGGATTCAGAGCATTTC+AGG | + | chr3_2:32660129-32660148 | Msa0403140:intron | 40.0% |
| TGACGAGACAAAGAAAGTAG+TGG | - | chr3_2:32660235-32660254 | None:intergenic | 40.0% | |
| AACACGAGCTTCAAGCATTA+AGG | + | chr3_2:32660341-32660360 | Msa0403140:CDS | 40.0% | |
| ! | TGAACATTCTGAAAGTTCGG+GGG | - | chr3_2:32660684-32660703 | None:intergenic | 40.0% |
| ATCACCCGAAAATGCCAAAA+AGG | + | chr3_2:32660721-32660740 | Msa0403140:CDS | 40.0% | |
| !!! | CCAGCACAGTGCAATTTTTT+TGG | - | chr3_2:32660768-32660787 | None:intergenic | 40.0% |
| CCAAAAAAATTGCACTGTGC+TGG | + | chr3_2:32660765-32660784 | Msa0403140:intron | 40.0% | |
| AGAAATCACGAGTCCAATGA+TGG | - | chr3_2:32660855-32660874 | None:intergenic | 40.0% | |
| TACCTCTGGTATATTGTGGT+TGG | + | chr3_2:32660884-32660903 | Msa0403140:intron | 40.0% | |
| ACCTCTGGTATATTGTGGTT+GGG | + | chr3_2:32660885-32660904 | Msa0403140:intron | 40.0% | |
| AGTAATTAGGCCCAAAGAAC+AGG | + | chr3_2:32660986-32661005 | Msa0403140:intron | 40.0% | |
| ATATAGGGGATATTAAGGGG+AGG | + | chr3_2:32661044-32661063 | Msa0403140:intron | 40.0% | |
| TATAGGGGATATTAAGGGGA+GGG | + | chr3_2:32661045-32661064 | Msa0403140:intron | 40.0% | |
| TGTATAATTGGTTGAAGGGG+GGG | + | chr3_2:32661073-32661092 | Msa0403140:intron | 40.0% | |
| AGAAAAAGAACAGGTGGCAA+TGG | + | chr3_2:32661160-32661179 | Msa0403140:intron | 40.0% | |
| AGAGAAGATACATGGATCAC+AGG | + | chr3_2:32661198-32661217 | Msa0403140:intron | 40.0% | |
| GTGAGAAGGACTATATGAAG+GGG | + | chr3_2:32661225-32661244 | Msa0403140:intron | 40.0% | |
| CTATATGAAGGGGTAGCTAA+AGG | + | chr3_2:32661235-32661254 | Msa0403140:intron | 40.0% | |
| ! | AGAGAAGTTAGTTCTTCCTC+TGG | + | chr3_2:32661303-32661322 | Msa0403140:intron | 40.0% |
| ! | AGTTAGTTCTTCCTCTGGAA+AGG | + | chr3_2:32661308-32661327 | Msa0403140:intron | 40.0% |
| ! | GTTAGTTCTTCCTCTGGAAA+GGG | + | chr3_2:32661309-32661328 | Msa0403140:intron | 40.0% |
| ! | TTAGTTCTTCCTCTGGAAAG+GGG | + | chr3_2:32661310-32661329 | Msa0403140:intron | 40.0% |
| GAGCATTTGAGAAGCAAGTT+GGG | - | chr3_2:32661705-32661724 | None:intergenic | 40.0% | |
| TGAGCATTTGAGAAGCAAGT+TGG | - | chr3_2:32661706-32661725 | None:intergenic | 40.0% | |
| TCACACTTTGTACTCGTCAA+TGG | - | chr3_2:32661963-32661982 | None:intergenic | 40.0% | |
| ATGCTTTCCAGTATTCCATG+AGG | + | chr3_2:32662014-32662033 | Msa0403140:intron | 40.0% | |
| TTTCCAGTATTCCATGAGGT+TGG | + | chr3_2:32662018-32662037 | Msa0403140:intron | 40.0% | |
| AGAAGACCGAAAACACCTAT+AGG | + | chr3_2:32662205-32662224 | Msa0403140:intron | 40.0% | |
| TAAAGAAGGCTTATCCCACA+AGG | - | chr3_2:32662270-32662289 | None:intergenic | 40.0% | |
| CATTATCAGGTAGTTTCGTC+TGG | + | chr3_2:32662377-32662396 | Msa0403140:intron | 40.0% | |
| !! | TTCTGGGGCATAAACTGATT+TGG | - | chr3_2:32662451-32662470 | None:intergenic | 40.0% |
| AATATGCGTCCAACGTCAAA+AGG | - | chr3_2:32662474-32662493 | None:intergenic | 40.0% | |
| !! | TTTGTTTTCAGCTGCTGGTT+TGG | + | chr3_2:32662720-32662739 | Msa0403140:intron | 40.0% |
| !!! | TTGTTTTCAGCTGCTGGTTT+GGG | + | chr3_2:32662721-32662740 | Msa0403140:intron | 40.0% |
| ! | TGGTTTGGGAAACTATGTAG+AGG | + | chr3_2:32662735-32662754 | Msa0403140:CDS | 40.0% |
| CAATGCAGGTATTTCAACTG+TGG | + | chr3_2:32663212-32663231 | Msa0403140:intron | 40.0% | |
| ACTGTGGTAACTGTCAATTC+TGG | + | chr3_2:32663228-32663247 | Msa0403140:intron | 40.0% | |
| TGACAACAAGAAGCAAGAGT+GGG | - | chr3_2:32663329-32663348 | None:intergenic | 40.0% | |
| ATGACAACAAGAAGCAAGAG+TGG | - | chr3_2:32663330-32663349 | None:intergenic | 40.0% | |
| !!! | CTATTTTGGCAACCAAAGCA+AGG | + | chr3_2:32663435-32663454 | Msa0403140:CDS | 40.0% |
| ACAAAAGAGAGTCCTTGCTT+TGG | - | chr3_2:32663450-32663469 | None:intergenic | 40.0% | |
| !! | TCTGAAGGAGTTTTGTGATC+TGG | - | chr3_2:32663684-32663703 | None:intergenic | 40.0% |
| ! | CAAGTCCATCATGTTTCTGA+AGG | - | chr3_2:32663699-32663718 | None:intergenic | 40.0% |
| TGCTATGGAATCATACCTTG+TGG | + | chr3_2:32663805-32663824 | Msa0403140:three_prime_UTR | 40.0% | |
| GAGTACAATTATGGAGTTGG+TGG | + | chr3_2:32663911-32663930 | Msa0403140:three_prime_UTR | 40.0% | |
| AACCATCAATTAGCACCTCA+AGG | - | chr3_2:32663958-32663977 | None:intergenic | 40.0% | |
| ! | AAGAGAGAGAGAGAGAGTGT+AGG | - | chr3_2:32656514-32656533 | None:intergenic | 45.0% |
| CTCTCTTTCTGCTACCTTCT+TGG | + | chr3_2:32656527-32656546 | Msa0403140:five_prime_UTR | 45.0% | |
| CATAGTGTCACCAAAACTGC+GGG | - | chr3_2:32656774-32656793 | None:intergenic | 45.0% | |
| CCTTCATCGATAGCACTTTC+GGG | - | chr3_2:32656892-32656911 | None:intergenic | 45.0% | |
| !! | GAAAGTGCTATCGATGAAGG+AGG | + | chr3_2:32656892-32656911 | Msa0403140:CDS | 45.0% |
| TGCTGCTAAGTTGTCTGAAG+AGG | + | chr3_2:32657006-32657025 | Msa0403140:CDS | 45.0% | |
| AAAGAGTCCTTGTCCCACAT+CGG | + | chr3_2:32657345-32657364 | Msa0403140:intron | 45.0% | |
| GACAAAAGATGGCCTGAACA+TGG | + | chr3_2:32657367-32657386 | Msa0403140:intron | 45.0% | |
| CAAAAGATGGCCTGAACATG+GGG | + | chr3_2:32657369-32657388 | Msa0403140:intron | 45.0% | |
| AAAAGATGGCCTGAACATGG+GGG | + | chr3_2:32657370-32657389 | Msa0403140:intron | 45.0% | |
| CGGTTTAGTGAGGTTGTGTT+AGG | + | chr3_2:32657412-32657431 | Msa0403140:intron | 45.0% | |
| AACCAATGCCATGTTGCTAG+AGG | + | chr3_2:32657509-32657528 | Msa0403140:intron | 45.0% | |
| ATATGAGGCCTCTAGCAACA+TGG | - | chr3_2:32657520-32657539 | None:intergenic | 45.0% | |
| AAGGCCATGACTCGTATATG+AGG | - | chr3_2:32657535-32657554 | None:intergenic | 45.0% | |
| !! | TGGTGACTACGGAGCATTTT+AGG | + | chr3_2:32657653-32657672 | Msa0403140:intron | 45.0% |
| !! | ACTTTTAATTAGGGGTGGGG+TGG | + | chr3_2:32657755-32657774 | Msa0403140:intron | 45.0% |
| !! | CTTTTAATTAGGGGTGGGGT+GGG | + | chr3_2:32657756-32657775 | Msa0403140:intron | 45.0% |
| !! | TTTTAATTAGGGGTGGGGTG+GGG | + | chr3_2:32657757-32657776 | Msa0403140:intron | 45.0% |
| GTCTCAAACTTCAGGAAACC+AGG | + | chr3_2:32658880-32658899 | Msa0403140:CDS | 45.0% | |
| AATTTGTGGCAGTGTGCAGT+TGG | + | chr3_2:32659325-32659344 | Msa0403140:intron | 45.0% | |
| ACCAAAGAGAGGTAAGGTCA+GGG | - | chr3_2:32659818-32659837 | None:intergenic | 45.0% | |
| AACCAAAGAGAGGTAAGGTC+AGG | - | chr3_2:32659819-32659838 | None:intergenic | 45.0% | |
| CAGTTGGCAAGGGAAAAGAA+AGG | + | chr3_2:32660572-32660591 | Msa0403140:intron | 45.0% | |
| !! | TGAAAGTTCGGGGGCATTAT+TGG | - | chr3_2:32660675-32660694 | None:intergenic | 45.0% |
| ! | GCTGGGTGAATAGCTTTTGA+AGG | + | chr3_2:32660783-32660802 | Msa0403140:intron | 45.0% |
| GTCAGTTGGGTATCCATCAT+TGG | + | chr3_2:32660839-32660858 | Msa0403140:intron | 45.0% | |
| ACCCAACCACAATATACCAG+AGG | - | chr3_2:32660889-32660908 | None:intergenic | 45.0% | |
| ACTAGAAGGGCCTGTTCTTT+GGG | - | chr3_2:32660999-32661018 | None:intergenic | 45.0% | |
| AACTAGAAGGGCCTGTTCTT+TGG | - | chr3_2:32661000-32661019 | None:intergenic | 45.0% | |
| ATAGGGGATATTAAGGGGAG+GGG | + | chr3_2:32661046-32661065 | Msa0403140:intron | 45.0% | |
| GTATAATTGGTTGAAGGGGG+GGG | + | chr3_2:32661074-32661093 | Msa0403140:intron | 45.0% | |
| TATAATTGGTTGAAGGGGGG+GGG | + | chr3_2:32661075-32661094 | Msa0403140:intron | 45.0% | |
| ACTAAGAAACCCCTTTCCAG+AGG | - | chr3_2:32661322-32661341 | None:intergenic | 45.0% | |
| CTATGCACCAACTTGATGGA+GGG | - | chr3_2:32661670-32661689 | None:intergenic | 45.0% | |
| TCTATGCACCAACTTGATGG+AGG | - | chr3_2:32661671-32661690 | None:intergenic | 45.0% | |
| CTTCCAACCTCATGGAATAC+TGG | - | chr3_2:32662024-32662043 | None:intergenic | 45.0% | |
| CTTCTGCAACCTCTAGTGAT+TGG | - | chr3_2:32662190-32662209 | None:intergenic | 45.0% | |
| ATGTAGCCAATTCCTCCTTG+TGG | + | chr3_2:32662252-32662271 | Msa0403140:intron | 45.0% | |
| TGTAGCCAATTCCTCCTTGT+GGG | + | chr3_2:32662253-32662272 | Msa0403140:intron | 45.0% | |
| CTTATCCCACAAGGAGGAAT+TGG | - | chr3_2:32662261-32662280 | None:intergenic | 45.0% | |
| GTGCAAGTTAATGGCACAGT+AGG | - | chr3_2:32662319-32662338 | None:intergenic | 45.0% | |
| TCCAACGTCAAAAGGTTCTG+GGG | - | chr3_2:32662466-32662485 | None:intergenic | 45.0% | |
| GTCCAACGTCAAAAGGTTCT+GGG | - | chr3_2:32662467-32662486 | None:intergenic | 45.0% | |
| CAAACCTGGTTCAATTGGAC+CGG | - | chr3_2:32662544-32662563 | None:intergenic | 45.0% | |
| GTAGCCAAACCTGGTTCAAT+TGG | - | chr3_2:32662549-32662568 | None:intergenic | 45.0% | |
| ATGCAGCTATCATGCTTGCA+AGG | + | chr3_2:32663499-32663518 | Msa0403140:CDS | 45.0% | |
| ! | AGCCTTGAGGTGCTAATTGA+TGG | + | chr3_2:32663953-32663972 | Msa0403140:three_prime_UTR | 45.0% |
| !!! | AATAAAATGATTAAATTTTA+CGG | - | chr3_2:32659381-32659400 | None:intergenic | 5.0% |
| !!! | TAATTTTTTATAAATAAAGA+AGG | - | chr3_2:32662284-32662303 | None:intergenic | 5.0% |
| ! | ACAAGGATGACCCGCAGTTT+TGG | + | chr3_2:32656761-32656780 | Msa0403140:CDS | 50.0% |
| GCATAAGGACGTGGTATCAG+CGG | + | chr3_2:32656799-32656818 | Msa0403140:CDS | 50.0% | |
| !! | CCCGAAAGTGCTATCGATGA+AGG | + | chr3_2:32656889-32656908 | Msa0403140:CDS | 50.0% |
| ACGTGAAACTGCACAGCTGT+TGG | + | chr3_2:32656922-32656941 | Msa0403140:CDS | 50.0% | |
| GGAATCCTTAAAAGGGCGAG+TGG | + | chr3_2:32657206-32657225 | Msa0403140:CDS | 50.0% | |
| ATCCTTAAAAGGGCGAGTGG+CGG | + | chr3_2:32657209-32657228 | Msa0403140:CDS | 50.0% | |
| ! | CTTTTGTCCGATGTGGGACA+AGG | - | chr3_2:32657355-32657374 | None:intergenic | 50.0% |
| GTCCCACATCGGACAAAAGA+TGG | + | chr3_2:32657356-32657375 | Msa0403140:intron | 50.0% | |
| ! | GGCCATCTTTTGTCCGATGT+GGG | - | chr3_2:32657361-32657380 | None:intergenic | 50.0% |
| ! | AGGCCATCTTTTGTCCGATG+TGG | - | chr3_2:32657362-32657381 | None:intergenic | 50.0% |
| GAGGCCTCATATACGAGTCA+TGG | + | chr3_2:32657528-32657547 | Msa0403140:intron | 50.0% | |
| ATACGAGTCATGGCCTTCTG+TGG | + | chr3_2:32657538-32657557 | Msa0403140:intron | 50.0% | |
| TTTAATTAGGGGTGGGGTGG+GGG | + | chr3_2:32657758-32657777 | Msa0403140:intron | 50.0% | |
| ACACTCACAGAGGGAGTAGA+TGG | + | chr3_2:32657790-32657809 | Msa0403140:intron | 50.0% | |
| AGGGGAGCTAGTACAACAGA+AGG | + | chr3_2:32658089-32658108 | Msa0403140:CDS | 50.0% | |
| GCTAGTACAACAGAAGGCTG+AGG | + | chr3_2:32658095-32658114 | Msa0403140:CDS | 50.0% | |
| GGTTGAAGCTGAATGCTTGC+AGG | - | chr3_2:32658341-32658360 | None:intergenic | 50.0% | |
| AGCAGTTCAAAGAGTGGAGG+AGG | + | chr3_2:32658835-32658854 | Msa0403140:CDS | 50.0% | |
| TCTGTGGGTTCTGTAGGACT+TGG | + | chr3_2:32659668-32659687 | Msa0403140:intron | 50.0% | |
| AATGCTGCATCAGCCAAGCA+AGG | + | chr3_2:32659731-32659750 | Msa0403140:CDS | 50.0% | |
| TCCCTGACCTTACCTCTCTT+TGG | + | chr3_2:32659814-32659833 | Msa0403140:intron | 50.0% | |
| GGCAAGGGAAAAGAAAGGAG+AGG | + | chr3_2:32660577-32660596 | Msa0403140:CDS | 50.0% | |
| GGTCTTCATGCGAGTCAGTT+GGG | + | chr3_2:32660826-32660845 | Msa0403140:intron | 50.0% | |
| TAGGGGATATTAAGGGGAGG+GGG | + | chr3_2:32661047-32661066 | Msa0403140:intron | 50.0% | |
| GGGAGGGGGACATGTATAAT+TGG | + | chr3_2:32661061-32661080 | Msa0403140:intron | 50.0% | |
| ATAATTGGTTGAAGGGGGGG+GGG | + | chr3_2:32661076-32661095 | Msa0403140:intron | 50.0% | |
| ACAGGTGGCAATGGCATGAA+TGG | + | chr3_2:32661169-32661188 | Msa0403140:intron | 50.0% | |
| TGGCAATGGCATGAATGGAG+AGG | + | chr3_2:32661174-32661193 | Msa0403140:intron | 50.0% | |
| GGCAATGGCATGAATGGAGA+GGG | + | chr3_2:32661175-32661194 | Msa0403140:intron | 50.0% | |
| GGAGAGGGAGAGAAGATACA+TGG | + | chr3_2:32661190-32661209 | Msa0403140:intron | 50.0% | |
| GGATCACAGGACAAGTGAGA+AGG | + | chr3_2:32661211-32661230 | Msa0403140:intron | 50.0% | |
| GAAGGGGTAGCTAAAGGAAG+AGG | + | chr3_2:32661241-32661260 | Msa0403140:intron | 50.0% | |
| TCCAACACCCTCCATCAAGT+TGG | + | chr3_2:32661660-32661679 | Msa0403140:intron | 50.0% | |
| ! | ACCAACTTGATGGAGGGTGT+TGG | - | chr3_2:32661664-32661683 | None:intergenic | 50.0% |
| ! | AACGGGTCTTGTCAAGCTCT+TGG | + | chr3_2:32661728-32661747 | Msa0403140:intron | 50.0% |
| ATTCGGAGCTTCCAACCTCA+TGG | - | chr3_2:32662032-32662051 | None:intergenic | 50.0% | |
| AGAAGGCTTATCCCACAAGG+AGG | - | chr3_2:32662267-32662286 | None:intergenic | 50.0% | |
| CGTCCAACGTCAAAAGGTTC+TGG | - | chr3_2:32662468-32662487 | None:intergenic | 50.0% | |
| CAGATCACACTGTCAACCAC+CGG | + | chr3_2:32662522-32662541 | Msa0403140:CDS | 50.0% | |
| CGGTCCAATTGAACCAGGTT+TGG | + | chr3_2:32662542-32662561 | Msa0403140:intron | 50.0% | |
| ACCAGGTTTGGCTACAATGC+TGG | + | chr3_2:32662554-32662573 | Msa0403140:intron | 50.0% | |
| TCCAGCATTGTAGCCAAACC+TGG | - | chr3_2:32662558-32662577 | None:intergenic | 50.0% | |
| ACAAGAAGCAAGAGTGGGAG+AGG | - | chr3_2:32663324-32663343 | None:intergenic | 50.0% | |
| ! | CTTCAGCTTTGTGGAGTTCG+AGG | + | chr3_2:32663387-32663406 | Msa0403140:intron | 50.0% |
| TTTGTGGAGTTCGAGGAGGT+GGG | + | chr3_2:32663394-32663413 | Msa0403140:CDS | 50.0% | |
| CAGCTATCATGCTTGCAAGG+AGG | + | chr3_2:32663502-32663521 | Msa0403140:CDS | 50.0% | |
| CAAGGCTCAAACACTGGACA+TGG | - | chr3_2:32663940-32663959 | None:intergenic | 50.0% | |
| TGTCCAGTGTTTGAGCCTTG+AGG | + | chr3_2:32663940-32663959 | Msa0403140:three_prime_UTR | 50.0% | |
| TCCTTAAAAGGGCGAGTGGC+GGG | + | chr3_2:32657210-32657229 | Msa0403140:CDS | 55.0% | |
| ! | GCGAGTGGCGGGAAGAAATA+AGG | + | chr3_2:32657221-32657240 | Msa0403140:CDS | 55.0% |
| TGAGGATTGCCCCCATGTTC+AGG | - | chr3_2:32657382-32657401 | None:intergenic | 55.0% | |
| GCAATCCTCACCTCACAAGC+CGG | + | chr3_2:32657392-32657411 | Msa0403140:intron | 55.0% | |
| !! | CTAAACCGGCTTGTGAGGTG+AGG | - | chr3_2:32657400-32657419 | None:intergenic | 55.0% |
| !! | CCTCACTAAACCGGCTTGTG+AGG | - | chr3_2:32657405-32657424 | None:intergenic | 55.0% |
| ! | CCTCACAAGCCGGTTTAGTG+AGG | + | chr3_2:32657402-32657421 | Msa0403140:intron | 55.0% |
| GGCCTCTAGCAACATGGCAT+TGG | - | chr3_2:32657514-32657533 | None:intergenic | 55.0% | |
| TTTGGGGGGACACTCACAGA+GGG | + | chr3_2:32657781-32657800 | Msa0403140:intron | 55.0% | |
| CACTCTTTGAACTGCTGCCC+GGG | - | chr3_2:32658831-32658850 | None:intergenic | 55.0% | |
| CCACTCTTTGAACTGCTGCC+CGG | - | chr3_2:32658832-32658851 | None:intergenic | 55.0% | |
| GGCAGCAGTTCAAAGAGTGG+AGG | + | chr3_2:32658832-32658851 | Msa0403140:CDS | 55.0% | |
| !! | TCGGGGGCATTATTGGAGCA+AGG | - | chr3_2:32660668-32660687 | None:intergenic | 55.0% |
| GGGTCTTCATGCGAGTCAGT+TGG | + | chr3_2:32660825-32660844 | Msa0403140:intron | 55.0% | |
| !! | CCAGACAGAGAAGCGCTTCA+AGG | - | chr3_2:32661907-32661926 | None:intergenic | 55.0% |
| ! | CCTTGAAGCGCTTCTCTGTC+TGG | + | chr3_2:32661904-32661923 | Msa0403140:intron | 55.0% |
| ! | GCCCCAGAACCTTTTGACGT+TGG | + | chr3_2:32662462-32662481 | Msa0403140:CDS | 55.0% |
| ACCACCGGTCCAATTGAACC+AGG | + | chr3_2:32662537-32662556 | Msa0403140:CDS | 55.0% | |
| ACCTGGTTCAATTGGACCGG+TGG | - | chr3_2:32662541-32662560 | None:intergenic | 55.0% | |
| ! | CAGCTTTGTGGAGTTCGAGG+AGG | + | chr3_2:32663390-32663409 | Msa0403140:intron | 55.0% |
| CTTTGTGGAGTTCGAGGAGG+TGG | + | chr3_2:32663393-32663412 | Msa0403140:CDS | 55.0% | |
| GCACCTCAAGGCTCAAACAC+TGG | - | chr3_2:32663946-32663965 | None:intergenic | 55.0% | |
| ! | TCCCGCCACTCGCCCTTTTA+AGG | - | chr3_2:32657214-32657233 | None:intergenic | 60.0% |
| TGGCCTTCTGTGGAGCTGCT+CGG | + | chr3_2:32657548-32657567 | Msa0403140:intron | 60.0% | |
| GTACCGAGCAGCTCCACAGA+AGG | - | chr3_2:32657554-32657573 | None:intergenic | 60.0% | |
| GTTTGGGGGGACACTCACAG+AGG | + | chr3_2:32657780-32657799 | Msa0403140:intron | 60.0% | |
| CCGGGCAGCAGTTCAAAGAG+TGG | + | chr3_2:32658829-32658848 | Msa0403140:CDS | 60.0% | |
| TCGAGGAGGTGGGAATGCTG+CGG | + | chr3_2:32663404-32663423 | Msa0403140:CDS | 60.0% | |
| ! | CTGCGGCGCAGGCACTATTT+TGG | + | chr3_2:32663421-32663440 | Msa0403140:CDS | 60.0% |
| TTAGGGGTGGGGTGGGGGTT+TGG | + | chr3_2:32657763-32657782 | Msa0403140:intron | 65.0% | |
| TAGGGGTGGGGTGGGGGTTT+GGG | + | chr3_2:32657764-32657783 | Msa0403140:intron | 65.0% | |
| AGGGGTGGGGTGGGGGTTTG+GGG | + | chr3_2:32657765-32657784 | Msa0403140:intron | 70.0% | |
| AGGTGGGAATGCTGCGGCGC+AGG | + | chr3_2:32663410-32663429 | Msa0403140:CDS | 70.0% | |
| GGGGTGGGGTGGGGGTTTGG+GGG | + | chr3_2:32657766-32657785 | Msa0403140:intron | 75.0% | |
| GGGTGGGGTGGGGGTTTGGG+GGG | + | chr3_2:32657767-32657786 | Msa0403140:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 32656439 | 32664015 | 32656439 | ID=Msa0403140;Name=Msa0403140 |
| chr3_2 | mRNA | 32656439 | 32664015 | 32656439 | ID=Msa0403140-mRNA-1;Parent=Msa0403140;Name=Msa0403140-mRNA-1;_AED=0.09;_eAED=0.09;_QI=194|0.91|0.92|1|0.91|0.92|13|305|483 |
| chr3_2 | exon | 32656439 | 32656613 | 32656439 | ID=Msa0403140-mRNA-1:exon:6430;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32656739 | 32657027 | 32656739 | ID=Msa0403140-mRNA-1:exon:6431;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32657141 | 32657248 | 32657141 | ID=Msa0403140-mRNA-1:exon:6432;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32658054 | 32658146 | 32658054 | ID=Msa0403140-mRNA-1:exon:6433;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32658761 | 32658901 | 32658761 | ID=Msa0403140-mRNA-1:exon:6434;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32659684 | 32659752 | 32659684 | ID=Msa0403140-mRNA-1:exon:6435;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32660328 | 32660411 | 32660328 | ID=Msa0403140-mRNA-1:exon:6436;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32660575 | 32660755 | 32660575 | ID=Msa0403140-mRNA-1:exon:6437;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32662442 | 32662558 | 32662442 | ID=Msa0403140-mRNA-1:exon:6438;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32662731 | 32662789 | 32662731 | ID=Msa0403140-mRNA-1:exon:6439;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32663085 | 32663219 | 32663085 | ID=Msa0403140-mRNA-1:exon:6440;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32663393 | 32663542 | 32663393 | ID=Msa0403140-mRNA-1:exon:6441;Parent=Msa0403140-mRNA-1 |
| chr3_2 | exon | 32663666 | 32664015 | 32663666 | ID=Msa0403140-mRNA-1:exon:6442;Parent=Msa0403140-mRNA-1 |
| chr3_2 | five_prime_UTR | 32656439 | 32656613 | 32656439 | ID=Msa0403140-mRNA-1:five_prime_utr;Parent=Msa0403140-mRNA-1 |
| chr3_2 | five_prime_UTR | 32656739 | 32656757 | 32656739 | ID=Msa0403140-mRNA-1:five_prime_utr;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32656758 | 32657027 | 32656758 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32657141 | 32657248 | 32657141 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32658054 | 32658146 | 32658054 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32658761 | 32658901 | 32658761 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32659684 | 32659752 | 32659684 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32660328 | 32660411 | 32660328 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32660575 | 32660755 | 32660575 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32662442 | 32662558 | 32662442 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32662731 | 32662789 | 32662731 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32663085 | 32663219 | 32663085 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32663393 | 32663542 | 32663393 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | CDS | 32663666 | 32663710 | 32663666 | ID=Msa0403140-mRNA-1:cds;Parent=Msa0403140-mRNA-1 |
| chr3_2 | three_prime_UTR | 32663711 | 32664015 | 32663711 | ID=Msa0403140-mRNA-1:three_prime_utr;Parent=Msa0403140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
