AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0357080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357080 MtrunA17_Chr3g0093921 89.418 189 17 2 7 195 13 198 3.64e-122 344
Msa0357080 MtrunA17_Chr3g0093941 66.667 66 22 0 152 217 40 105 6.00e-22 86.7
Msa0357080 MtrunA17_Chr1g0151151 29.932 147 95 4 30 173 322 463 3.93e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357080 AT2G26810.2 55.411 231 68 4 20 217 20 248 2.30e-83 248
Msa0357080 AT2G26810.1 55.411 231 68 4 20 217 20 248 2.30e-83 248
Msa0357080 AT2G26810.3 64.848 165 56 2 20 184 20 182 9.75e-76 227
Msa0357080 AT2G26810.7 64.848 165 56 2 20 184 20 182 9.75e-76 227
Msa0357080 AT2G26810.4 64.848 165 56 2 20 184 20 182 9.75e-76 227
Msa0357080 AT2G26810.6 62.420 157 58 1 28 184 35 190 1.13e-68 209
Msa0357080 AT2G26810.5 62.420 157 58 1 28 184 35 190 1.13e-68 209

Find 67 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGACCAATTTGAGAATT+TGG 0.168755 3_1:-37584433 None:intergenic
CCAACAATACACTTTGTTTC+AGG 0.207273 3_1:-37591931 None:intergenic
GGAGGTTTCGACTTCGTTCT+TGG 0.242993 3_1:+37590240 Msa0357080:CDS
GGTTGCACTGCTATTGAATT+AGG 0.248895 3_1:+37586413 Msa0357080:CDS
CCTTAAGCACTTCTTCATTA+TGG 0.260054 3_1:-37589940 None:intergenic
TCATATGCCATGTCTGCTTC+TGG 0.274775 3_1:-37592022 None:intergenic
GGATTATTAAATACATAATA+AGG 0.291772 3_1:-37590278 None:intergenic
TTTGTACCAAATTCTCAAAT+TGG 0.315744 3_1:+37584427 Msa0357080:five_prime_UTR
TTGAGCATTGGCTAGTGTTT+TGG 0.319306 3_1:+37592064 Msa0357080:three_prime_UTR
GTTTGAGTAAATCATCAAAT+TGG 0.320593 3_1:-37584553 None:intergenic
AAAACATGTTGAGATGTTTC+AGG 0.320727 3_1:+37586391 Msa0357080:CDS
AGAAATCCATGGGTTTGATA+TGG 0.336342 3_1:+37592156 Msa0357080:three_prime_UTR
TGCTCAAGTCAAATCAGTTC+TGG 0.350835 3_1:-37592048 None:intergenic
CTTTGAATCACAGGTATTAC+CGG 0.354880 3_1:+37589875 Msa0357080:intron
ATTGTGTTTCTACCTCAAAT+TGG 0.371107 3_1:-37584528 None:intergenic
CAGCTTACGGAATTCACATT+TGG 0.383218 3_1:+37584853 Msa0357080:CDS
AATATTAGTCCTACTTCTAA+TGG 0.385228 3_1:+37590076 Msa0357080:CDS
CATTAAATTAATATAGTTTG+AGG 0.390009 3_1:+37591996 Msa0357080:three_prime_UTR
TCTTGAAAATCTTAAGTAGT+TGG 0.397330 3_1:-37592256 None:intergenic
GAATCTGTGGCAAAGTATTC+CGG 0.397864 3_1:-37589894 None:intergenic
AAAGACAGGGACTAATTTGA+TGG 0.408105 3_1:-37584407 None:intergenic
ATTTGACAGGGCAGCTGGTA+TGG 0.413020 3_1:+37586336 Msa0357080:CDS
TTTCTCTTTCTACGACGCTT+TGG 0.413908 3_1:-37584664 None:intergenic
GACAAATTGATATGAATGAT+TGG 0.422709 3_1:+37592277 Msa0357080:three_prime_UTR
TGAGAATTTGGTACAAAGAC+AGG 0.425460 3_1:-37584421 None:intergenic
TCAGCTGACTTTGATTTGAC+AGG 0.429318 3_1:+37586323 Msa0357080:intron
CTTTGATTTGACAGGGCAGC+TGG 0.433935 3_1:+37586331 Msa0357080:CDS
AGTTATTAGCAGAGTCGGTC+AGG 0.434450 3_1:+37584504 Msa0357080:five_prime_UTR
ACAGGGCAGCTGGTATGGCC+TGG 0.443321 3_1:+37586341 Msa0357080:CDS
AAAGAGACTATGAAAGAAAG+AGG 0.457957 3_1:-37584594 None:intergenic
AATTTGAAGTTACCAGCTTA+CGG 0.460727 3_1:+37584840 Msa0357080:intron
AAACATGTTGAGATGTTTCA+GGG 0.475930 3_1:+37586392 Msa0357080:CDS
CCTGAAACAAAGTGTATTGT+TGG 0.477583 3_1:+37591931 Msa0357080:CDS
AACTGATTTGACTTGAGCAT+TGG 0.482830 3_1:+37592052 Msa0357080:three_prime_UTR
ACTGCTATTGAATTAGGTTC+TGG 0.483380 3_1:+37586419 Msa0357080:CDS
AGTAGCAGAGAAACTAGAAT+GGG 0.487344 3_1:+37590176 Msa0357080:CDS
CCATAATGAAGAAGTGCTTA+AGG 0.488107 3_1:+37589940 Msa0357080:CDS
AGAAAACAAAGGATTGCAAA+AGG 0.496450 3_1:+37584682 Msa0357080:CDS
GAAGTAGGACTAATATTCTC+AGG 0.508688 3_1:-37590070 None:intergenic
TAAGTTTCAGATGCAGATGA+AGG 0.509468 3_1:+37591903 Msa0357080:CDS
TCATTCAGCAACATGGCTCC+AGG 0.509855 3_1:-37586359 None:intergenic
ATTGAATTAGGTTCTGGTGT+TGG 0.509964 3_1:+37586425 Msa0357080:CDS
ATTTCTAACTTCTGTAAACA+AGG 0.515003 3_1:-37584632 None:intergenic
CTGCAATGATTGACAAGGGT+AGG 0.523374 3_1:-37592111 None:intergenic
CAGCTGACTTTGATTTGACA+GGG 0.526873 3_1:+37586324 Msa0357080:intron
ATTTACTCACCATTAGAAGT+AGG 0.527615 3_1:-37590085 None:intergenic
AGAACGAAGTCGAAACCTCC+AGG 0.535558 3_1:-37590237 None:intergenic
AGTCGGTCAGGACCAATTTG+AGG 0.538782 3_1:+37584516 Msa0357080:five_prime_UTR
AAGAGACTATGAAAGAAAGA+GGG 0.547892 3_1:-37584593 None:intergenic
CAAATGTGAATTCCGTAAGC+TGG 0.548815 3_1:-37584852 None:intergenic
AGGATTGCAAAAGGAAGAAG+AGG 0.555089 3_1:+37584691 Msa0357080:CDS
GAGGTTTCCAGAAGCAGACA+TGG 0.556076 3_1:+37592015 Msa0357080:three_prime_UTR
TAGTAGCAGAGAAACTAGAA+TGG 0.557861 3_1:+37590175 Msa0357080:CDS
CAACTTTATTGCAGAATCTG+TGG 0.563876 3_1:-37589907 None:intergenic
CTGAAACAAAGTGTATTGTT+GGG 0.571235 3_1:+37591932 Msa0357080:CDS
AAGATGACTCAAGAAATCCA+TGG 0.595630 3_1:+37592145 Msa0357080:three_prime_UTR
AGATGACTCAAGAAATCCAT+GGG 0.598039 3_1:+37592146 Msa0357080:three_prime_UTR
AATGAAACGACGTGACATGA+AGG 0.606485 3_1:+37584361 Msa0357080:five_prime_UTR
GAGAATTTGGTACAAAGACA+GGG 0.608933 3_1:-37584420 None:intergenic
TGTATTGTTGGGAATCATGA+AGG 0.613190 3_1:+37591943 Msa0357080:CDS
TTTCTAACTTCTGTAAACAA+GGG 0.615345 3_1:-37584631 None:intergenic
TGCAATGATTGACAAGGGTA+GGG 0.621777 3_1:-37592110 None:intergenic
TAGATAATCATTCAGCAACA+TGG 0.625311 3_1:-37586366 None:intergenic
GTTGTCTGCAATGATTGACA+AGG 0.677902 3_1:-37592116 None:intergenic
GTCGTAGAAAGAGAAAACAA+AGG 0.692171 3_1:+37584671 Msa0357080:CDS
GTAGCAGAGAAACTAGAATG+GGG 0.707858 3_1:+37590177 Msa0357080:CDS
TTGTCTGCAATGATTGACAA+GGG 0.756598 3_1:-37592115 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr3_1:37588125-37588144 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr3_1:37588126-37588145 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG + chr3_1:37588126-37588145 Msa0357080:intron 0.0%
!! TATATATATATATATATATA+GGG + chr3_1:37588125-37588144 Msa0357080:intron 0.0%
!!! GATAGTATTTTATTTTTATT+TGG - chr3_1:37585170-37585189 None:intergenic 10.0%
!!! TTTATATTGGTTTTAAATAA+TGG + chr3_1:37585738-37585757 Msa0357080:intron 10.0%
!!! TTTTTTATTTAGAACTTTAA+TGG + chr3_1:37587499-37587518 Msa0357080:intron 10.0%
!!! TTTTTTTTTTTTATTGATCA+GGG - chr3_1:37587701-37587720 None:intergenic 10.0%
!!! GTTAAGATTTTTTATAAAAA+TGG + chr3_1:37588764-37588783 Msa0357080:intron 10.0%
!!! TTGTTGATATTAATTTTATT+TGG - chr3_1:37591019-37591038 None:intergenic 10.0%
!!! TTCTTTTGAATTACATTATT+GGG - chr3_1:37586674-37586693 None:intergenic 15.0%
!!! ATTCTTTTGAATTACATTAT+TGG - chr3_1:37586675-37586694 None:intergenic 15.0%
!!! CTAGTTTTCATTTAAAAAAT+AGG + chr3_1:37587364-37587383 Msa0357080:intron 15.0%
!!! CTTTTTTTTTTTTATTGATC+AGG - chr3_1:37587702-37587721 None:intergenic 15.0%
!!! TTTTTTTATTTTAGAAGTTG+TGG - chr3_1:37588520-37588539 None:intergenic 15.0%
!! TAAATCTATTATTTGAGAAA+TGG - chr3_1:37589169-37589188 None:intergenic 15.0%
!!! AATTTTGTTATTTACTTCTA+CGG - chr3_1:37589208-37589227 None:intergenic 15.0%
!!! AAATAAATTGAAGATTTTCA+AGG - chr3_1:37589407-37589426 None:intergenic 15.0%
!! TATTTAAATCAAAATTCAGA+GGG - chr3_1:37590143-37590162 None:intergenic 15.0%
!! ATATTTAAATCAAAATTCAG+AGG - chr3_1:37590144-37590163 None:intergenic 15.0%
!!! TTTGATTTAAATATATATGC+AGG + chr3_1:37590150-37590169 Msa0357080:intron 15.0%
!! GGATTATTAAATACATAATA+AGG - chr3_1:37590281-37590300 None:intergenic 15.0%
!! TTGAAATATTGATATATTGA+GGG - chr3_1:37590462-37590481 None:intergenic 15.0%
!!! TTTGAAATATTGATATATTG+AGG - chr3_1:37590463-37590482 None:intergenic 15.0%
!! ACAATAAATAAGTACTTATA+AGG - chr3_1:37590591-37590610 None:intergenic 15.0%
!! CATTAAATTAATATAGTTTG+AGG + chr3_1:37591996-37592015 Msa0357080:three_prime_UTR 15.0%
!! GAAATGTAAAAAAAACTTAC+TGG - chr3_1:37584917-37584936 None:intergenic 20.0%
!!! GACAAAAAATGACTATTTTA+GGG - chr3_1:37585456-37585475 None:intergenic 20.0%
!!! AGACAAAAAATGACTATTTT+AGG - chr3_1:37585457-37585476 None:intergenic 20.0%
!! ATAAGAAGAATTAACAAGAT+AGG - chr3_1:37585562-37585581 None:intergenic 20.0%
!! ATCTTGTTAATTCTTCTTAT+TGG + chr3_1:37585562-37585581 Msa0357080:intron 20.0%
!! CAATATAAAGCAAATAATGT+TGG - chr3_1:37585727-37585746 None:intergenic 20.0%
!! CAACATTATTTGCTTTATAT+TGG + chr3_1:37585725-37585744 Msa0357080:intron 20.0%
!!! TTTTTGCTTTTTTATGTGTA+TGG + chr3_1:37585821-37585840 Msa0357080:intron 20.0%
!!! TTTTGCTTTTTTATGTGTAT+GGG + chr3_1:37585822-37585841 Msa0357080:intron 20.0%
!! ATATAATAACATACAAGACA+GGG + chr3_1:37586022-37586041 Msa0357080:intron 20.0%
!!! ATTTTCTGTGTTTTTATAAC+TGG + chr3_1:37586233-37586252 Msa0357080:intron 20.0%
!!! CTGTATCTTATAGTTTTTTT+TGG + chr3_1:37586275-37586294 Msa0357080:intron 20.0%
!!! GTTTATACTTTTTATGTTTG+TGG + chr3_1:37586485-37586504 Msa0357080:intron 20.0%
!! ACATATTATGATTACATGAT+AGG - chr3_1:37586645-37586664 None:intergenic 20.0%
!! TCATGTAATCATAATATGTT+AGG + chr3_1:37586646-37586665 Msa0357080:intron 20.0%
!! TTGAGAAAATAAGAAAGAAT+AGG + chr3_1:37586714-37586733 Msa0357080:intron 20.0%
!! TGAGAAAATAAGAAAGAATA+GGG + chr3_1:37586715-37586734 Msa0357080:intron 20.0%
!!! AAATGGATTTTGTTTAGAAA+TGG + chr3_1:37587184-37587203 Msa0357080:intron 20.0%
!!! AACCAATTTTTTATGTAATC+TGG + chr3_1:37587212-37587231 Msa0357080:intron 20.0%
!! AACCAGATTACATAAAAAAT+TGG - chr3_1:37587217-37587236 None:intergenic 20.0%
!! AAAAAACTGATATTGAAAAC+CGG - chr3_1:37587264-37587283 None:intergenic 20.0%
!! CTATTAACCAGTTTAATTAA+CGG + chr3_1:37587288-37587307 Msa0357080:intron 20.0%
!! CTAAAAACTAATATTACATG+TGG + chr3_1:37587550-37587569 Msa0357080:intron 20.0%
!!! TTACTGATTTGTATACATTT+CGG - chr3_1:37587738-37587757 None:intergenic 20.0%
!! AAATGTATACAAATCAGTAA+GGG + chr3_1:37587738-37587757 Msa0357080:intron 20.0%
!! TAAGTTAAATAGAGTCTAAT+TGG + chr3_1:37587890-37587909 Msa0357080:intron 20.0%
!! ATGTCATGAACAAAATATAT+TGG + chr3_1:37587929-37587948 Msa0357080:intron 20.0%
!! TGTCATGAACAAAATATATT+GGG + chr3_1:37587930-37587949 Msa0357080:intron 20.0%
!!! TTTTTTTTTGGAATAATGTG+TGG - chr3_1:37588292-37588311 None:intergenic 20.0%
!!! TGCGTGATTTTTTTTTTTTT+TGG - chr3_1:37588304-37588323 None:intergenic 20.0%
!! TAAATCGTGGATAAAAAAAT+TGG + chr3_1:37588590-37588609 Msa0357080:intron 20.0%
!! ATAAAAATGGTCAAAGAAAA+TGG + chr3_1:37588777-37588796 Msa0357080:intron 20.0%
!! TAAAAATGGTCAAAGAAAAT+GGG + chr3_1:37588778-37588797 Msa0357080:intron 20.0%
!!! TGTGTTTTTTTGTTTTTGTT+TGG + chr3_1:37588922-37588941 Msa0357080:intron 20.0%
!! TAAGGAAAACCTATATATAT+GGG - chr3_1:37589079-37589098 None:intergenic 20.0%
!!! TACAAAACAATTAGTTCTTT+TGG - chr3_1:37589541-37589560 None:intergenic 20.0%
!!! GTGGTATAATATTGTATTTT+TGG + chr3_1:37589710-37589729 Msa0357080:intron 20.0%
!!! GATGTTTTTGTAAAATTTCA+TGG - chr3_1:37590218-37590237 None:intergenic 20.0%
!! TTGTAATGTTAGATATCAAT+GGG - chr3_1:37590302-37590321 None:intergenic 20.0%
!! TATGACAATAAGTATATTGA+AGG - chr3_1:37590563-37590582 None:intergenic 20.0%
!!! TTGTAATTTTGATACATTGA+AGG + chr3_1:37590711-37590730 Msa0357080:intron 20.0%
!!! AGTTCATTTTAGCAAATAAT+TGG - chr3_1:37590890-37590909 None:intergenic 20.0%
!!! AATTTTTGTTTATCTCTTCT+TGG + chr3_1:37591195-37591214 Msa0357080:intron 20.0%
!!! CTGTAGTTCATTATATTTTT+GGG + chr3_1:37591449-37591468 Msa0357080:intron 20.0%
!! AACGAAAAATGATTCATATA+TGG + chr3_1:37591514-37591533 Msa0357080:intron 20.0%
!!! AAAAATACATTTTGCAAGAT+AGG - chr3_1:37592214-37592233 None:intergenic 20.0%
!!! AATGTATTTTTCATTGTGTA+AGG + chr3_1:37592223-37592242 Msa0357080:three_prime_UTR 20.0%
! TTTGTACCAAATTCTCAAAT+TGG + chr3_1:37584427-37584446 Msa0357080:five_prime_UTR 25.0%
! GTTTGAGTAAATCATCAAAT+TGG - chr3_1:37584556-37584575 None:intergenic 25.0%
! TTTCTAACTTCTGTAAACAA+GGG - chr3_1:37584634-37584653 None:intergenic 25.0%
! ATTTCTAACTTCTGTAAACA+AGG - chr3_1:37584635-37584654 None:intergenic 25.0%
! ATAGCTTAAGAAAAGTAACT+GGG - chr3_1:37585192-37585211 None:intergenic 25.0%
! AATAGCTTAAGAAAAGTAAC+TGG - chr3_1:37585193-37585212 None:intergenic 25.0%
! TGAACATTTACCCTAAATTT+CGG + chr3_1:37585514-37585533 Msa0357080:intron 25.0%
!!! CCAAGTAAATTTTATTTCCT+TGG - chr3_1:37585977-37585996 None:intergenic 25.0%
! CCAAGGAAATAAAATTTACT+TGG + chr3_1:37585974-37585993 Msa0357080:intron 25.0%
! GTCTTGTATGTTATTATATC+AGG - chr3_1:37586021-37586040 None:intergenic 25.0%
! GATATAATAACATACAAGAC+AGG + chr3_1:37586021-37586040 Msa0357080:intron 25.0%
! TTCATAACTGCAAATCAATT+GGG - chr3_1:37586056-37586075 None:intergenic 25.0%
! ATTCATAACTGCAAATCAAT+TGG - chr3_1:37586057-37586076 None:intergenic 25.0%
! AAGTTTATATAAAAGCTTCC+AGG - chr3_1:37586202-37586221 None:intergenic 25.0%
! ATACAGAAAGCAAAAAATCA+AGG - chr3_1:37586261-37586280 None:intergenic 25.0%
!!! TCCTAGTTTTACAGATAAAA+AGG + chr3_1:37586533-37586552 Msa0357080:intron 25.0%
!!! CCTAGTTTTACAGATAAAAA+GGG + chr3_1:37586534-37586553 Msa0357080:intron 25.0%
!!! CTAGTTTTACAGATAAAAAG+GGG + chr3_1:37586535-37586554 Msa0357080:intron 25.0%
!!! TAGTTTTACAGATAAAAAGG+GGG + chr3_1:37586536-37586555 Msa0357080:intron 25.0%
! GTAACTAAATTCCTAAAACA+AGG - chr3_1:37586597-37586616 None:intergenic 25.0%
! TAATGACTCTATTGAAAAAG+GGG - chr3_1:37586766-37586785 None:intergenic 25.0%
! GTAATGACTCTATTGAAAAA+GGG - chr3_1:37586767-37586786 None:intergenic 25.0%
! AGTAATGACTCTATTGAAAA+AGG - chr3_1:37586768-37586787 None:intergenic 25.0%
! TATAGGATTAGGAGTTAATT+GGG - chr3_1:37586878-37586897 None:intergenic 25.0%
! ATATAGGATTAGGAGTTAAT+TGG - chr3_1:37586879-37586898 None:intergenic 25.0%
! GATAGTAACAATATAGGATT+AGG - chr3_1:37586889-37586908 None:intergenic 25.0%
! AGAAGAGATAGTAACAATAT+AGG - chr3_1:37586895-37586914 None:intergenic 25.0%
! TTGTTAGGATTTGAATTGTT+TGG - chr3_1:37586928-37586947 None:intergenic 25.0%
!!! TAAACAGGTTTGTTTCATTT+TGG - chr3_1:37587064-37587083 None:intergenic 25.0%
! AAATGAAACAAACCTGTTTA+TGG + chr3_1:37587064-37587083 Msa0357080:intron 25.0%
!!! TGTAATCTGGTTTTCAAAAA+TGG + chr3_1:37587225-37587244 Msa0357080:intron 25.0%
! TTGAAACTGGTTATTTAAAC+TGG - chr3_1:37587327-37587346 None:intergenic 25.0%
!! CATAAAAGTAGTATTGAAAC+TGG - chr3_1:37587340-37587359 None:intergenic 25.0%
!!! TATCTAAACCAGTTTTAAAC+TGG + chr3_1:37587392-37587411 Msa0357080:intron 25.0%
! ATCATTTGTACAAAACAGAA+GGG - chr3_1:37587457-37587476 None:intergenic 25.0%
! AATCATTTGTACAAAACAGA+AGG - chr3_1:37587458-37587477 None:intergenic 25.0%
!!! TACTGATTTGTATACATTTC+GGG - chr3_1:37587737-37587756 None:intergenic 25.0%
! GAAATGTATACAAATCAGTA+AGG + chr3_1:37587737-37587756 Msa0357080:intron 25.0%
! ATTTGTGATTTATGGTAACA+AGG - chr3_1:37587793-37587812 None:intergenic 25.0%
!!! AGTTTTCGATTTGTGATTTA+TGG - chr3_1:37587801-37587820 None:intergenic 25.0%
! TTAACTCCTCAGAAAAATTA+AGG - chr3_1:37587825-37587844 None:intergenic 25.0%
! GTCATGAACAAAATATATTG+GGG + chr3_1:37587931-37587950 Msa0357080:intron 25.0%
! AAAAAAAAAATCACGCAAAC+TGG + chr3_1:37588307-37588326 Msa0357080:intron 25.0%
!! AAACCACAACTTCTAAAAAA+AGG + chr3_1:37588402-37588421 Msa0357080:intron 25.0%
!! AACCACAACTTCTAAAAAAA+GGG + chr3_1:37588403-37588422 Msa0357080:intron 25.0%
!!! GTTTTAGATTATGATGCAAA+CGG + chr3_1:37588616-37588635 Msa0357080:intron 25.0%
! TTGGATAAAAATACACAGAT+CGG - chr3_1:37588997-37589016 None:intergenic 25.0%
!!! ATCTGTGTATTTTTATCCAA+TGG + chr3_1:37588997-37589016 Msa0357080:intron 25.0%
! GTAAGGAAAACCTATATATA+TGG - chr3_1:37589080-37589099 None:intergenic 25.0%
! TACAAAACATGAAATCTTGT+AGG + chr3_1:37589295-37589314 Msa0357080:intron 25.0%
!! TTCTTTTGACACAAAACATT+GGG - chr3_1:37589441-37589460 None:intergenic 25.0%
!! TTTCTTTTGACACAAAACAT+TGG - chr3_1:37589442-37589461 None:intergenic 25.0%
!! TTTTGGTCTCTAAGTTATAT+TGG - chr3_1:37589524-37589543 None:intergenic 25.0%
!!! AAGAACTAATTGTTTTGTAC+TGG + chr3_1:37589542-37589561 Msa0357080:intron 25.0%
! AATATTAGTCCTACTTCTAA+TGG + chr3_1:37590076-37590095 Msa0357080:CDS 25.0%
!! GAAATTTTACAAAAACATCC+TGG + chr3_1:37590219-37590238 Msa0357080:CDS 25.0%
! GTTGTAATGTTAGATATCAA+TGG - chr3_1:37590303-37590322 None:intergenic 25.0%
!! TTAAATGCCTAAAAGTATGA+TGG + chr3_1:37590328-37590347 Msa0357080:intron 25.0%
!!! ATTTTAGTCCCTATATGAAA+AGG + chr3_1:37590612-37590631 Msa0357080:intron 25.0%
!! TTTTAGTCCCTATATGAAAA+GGG + chr3_1:37590613-37590632 Msa0357080:intron 25.0%
!! ACAATAACCCTTTTCATATA+GGG - chr3_1:37590623-37590642 None:intergenic 25.0%
!!! GATTTATAAAACTTGTTGCA+AGG - chr3_1:37591365-37591384 None:intergenic 25.0%
!! TGCAATGAAGAACTTAATTT+TGG - chr3_1:37591428-37591447 None:intergenic 25.0%
!! GCTGTAGTTCATTATATTTT+TGG + chr3_1:37591448-37591467 Msa0357080:intron 25.0%
!!! TTCATTATATTTTTGGGACT+TGG + chr3_1:37591455-37591474 Msa0357080:intron 25.0%
!!! CACTTATTTTTTCATGAGAT+TGG + chr3_1:37591661-37591680 Msa0357080:intron 25.0%
! TCTTGAAAATCTTAAGTAGT+TGG - chr3_1:37592259-37592278 None:intergenic 25.0%
! GACAAATTGATATGAATGAT+TGG + chr3_1:37592277-37592296 Msa0357080:three_prime_UTR 25.0%
!!! TTTTGAGTTATTAGCAGAGT+CGG + chr3_1:37584499-37584518 Msa0357080:five_prime_UTR 30.0%
! ATTGTGTTTCTACCTCAAAT+TGG - chr3_1:37584531-37584550 None:intergenic 30.0%
AAGAGACTATGAAAGAAAGA+GGG - chr3_1:37584596-37584615 None:intergenic 30.0%
AAAGAGACTATGAAAGAAAG+AGG - chr3_1:37584597-37584616 None:intergenic 30.0%
AGAAAACAAAGGATTGCAAA+AGG + chr3_1:37584682-37584701 Msa0357080:CDS 30.0%
! CTGTAATGATTGATCTTTTC+TGG + chr3_1:37584812-37584831 Msa0357080:intron 30.0%
! AATTTGAAGTTACCAGCTTA+CGG + chr3_1:37584840-37584859 Msa0357080:intron 30.0%
! CTTTTCGTATATCGAAACTT+AGG - chr3_1:37584969-37584988 None:intergenic 30.0%
GTAGAAGAACAATTATTGGT+CGG + chr3_1:37585096-37585115 Msa0357080:intron 30.0%
TGTATATCCAATCACTTCAA+AGG - chr3_1:37585216-37585235 None:intergenic 30.0%
! TTGTAATAGTGTCACTATGA+CGG - chr3_1:37585401-37585420 None:intergenic 30.0%
AAGAATTAACAAGATAGGAG+GGG - chr3_1:37585557-37585576 None:intergenic 30.0%
GAAGAATTAACAAGATAGGA+GGG - chr3_1:37585558-37585577 None:intergenic 30.0%
AGAAGAATTAACAAGATAGG+AGG - chr3_1:37585559-37585578 None:intergenic 30.0%
AAATATAAGTGATTCCTCCA+AGG - chr3_1:37585658-37585677 None:intergenic 30.0%
!!! GATAAGCTATTTTGAAACCA+TGG + chr3_1:37585692-37585711 Msa0357080:intron 30.0%
!!! CTTTTTTATGTGTATGGGTA+TGG + chr3_1:37585827-37585846 Msa0357080:intron 30.0%
TTGCTTAGACATTACTATTG+CGG - chr3_1:37585913-37585932 None:intergenic 30.0%
TAGTAATGTCTAAGCAAATG+AGG + chr3_1:37585916-37585935 Msa0357080:intron 30.0%
AGTAATGTCTAAGCAAATGA+GGG + chr3_1:37585917-37585936 Msa0357080:intron 30.0%
!!! CATAGTGAACAGTTTTAGTT+TGG - chr3_1:37585949-37585968 None:intergenic 30.0%
TAGATAATCATTCAGCAACA+TGG - chr3_1:37586369-37586388 None:intergenic 30.0%
AAAACATGTTGAGATGTTTC+AGG + chr3_1:37586391-37586410 Msa0357080:CDS 30.0%
AAACATGTTGAGATGTTTCA+GGG + chr3_1:37586392-37586411 Msa0357080:CDS 30.0%
!!! GTAAAACTAGGAGCATTTTA+AGG - chr3_1:37586525-37586544 None:intergenic 30.0%
! CCCTTTTTATCTGTAAAACT+AGG - chr3_1:37586537-37586556 None:intergenic 30.0%
! AGTTTTACAGATAAAAAGGG+GGG + chr3_1:37586537-37586556 Msa0357080:intron 30.0%
!!! GCACAATATTACCTTGTTTT+AGG + chr3_1:37586583-37586602 Msa0357080:intron 30.0%
! CTTATCTTCCAAAGTATTAC+TGG + chr3_1:37586616-37586635 Msa0357080:intron 30.0%
ATAGGTTTCCAGTAATACTT+TGG - chr3_1:37586627-37586646 None:intergenic 30.0%
AATGACTCTATTGAAAAAGG+GGG - chr3_1:37586765-37586784 None:intergenic 30.0%
ATAGGATTAGGAGTTAATTG+GGG - chr3_1:37586877-37586896 None:intergenic 30.0%
GGATTTGAATTGTTTGGATT+TGG - chr3_1:37586922-37586941 None:intergenic 30.0%
TGTGTGATTATGTTAGGATA+AGG - chr3_1:37586957-37586976 None:intergenic 30.0%
! GTTTAAAACGAGTCTGAAAA+TGG + chr3_1:37587167-37587186 Msa0357080:intron 30.0%
AAATGGTTTATGCTTCAATC+CGG + chr3_1:37587242-37587261 Msa0357080:intron 30.0%
TCATTTGTACAAAACAGAAG+GGG - chr3_1:37587456-37587475 None:intergenic 30.0%
TAATATTACATGTGGCATGT+TGG + chr3_1:37587558-37587577 Msa0357080:intron 30.0%
TAAATATGTGCTACGTCATT+TGG - chr3_1:37587601-37587620 None:intergenic 30.0%
TGACGTAGCACATATTTATA+AGG + chr3_1:37587603-37587622 Msa0357080:intron 30.0%
!! GGTTGTTATTTCTGAAAATG+TGG - chr3_1:37587630-37587649 None:intergenic 30.0%
! AAACTGCCTTAATTTTTCTG+AGG + chr3_1:37587816-37587835 Msa0357080:intron 30.0%
GACATATCAATATCAACCAT+CGG + chr3_1:37588212-37588231 Msa0357080:intron 30.0%
AACCATCGGATATAAATACA+CGG + chr3_1:37588226-37588245 Msa0357080:intron 30.0%
TTAGAAGTTGTGGTTTCAAA+CGG - chr3_1:37588398-37588417 None:intergenic 30.0%
! TCAATTCGTAGGTTGAAAAT+TGG + chr3_1:37588566-37588585 Msa0357080:intron 30.0%
! CAATTCGTAGGTTGAAAATT+GGG + chr3_1:37588567-37588586 Msa0357080:intron 30.0%
AAGAGAAACCAATACAAAAG+AGG + chr3_1:37588802-37588821 Msa0357080:intron 30.0%
! CCTTTATTCCTCTTTTGTAT+TGG - chr3_1:37588813-37588832 None:intergenic 30.0%
CCAATACAAAAGAGGAATAA+AGG + chr3_1:37588810-37588829 Msa0357080:intron 30.0%
ATACAAAAGAGGAATAAAGG+AGG + chr3_1:37588813-37588832 Msa0357080:intron 30.0%
TTATCTAGATGTGAAGAACA+AGG + chr3_1:37588852-37588871 Msa0357080:intron 30.0%
! TTTGTTTGGAATAATGTGTG+TGG + chr3_1:37588936-37588955 Msa0357080:intron 30.0%
AGATATGCTCCCATATATAT+AGG + chr3_1:37589067-37589086 Msa0357080:intron 30.0%
GTGTCTGAATTCAAAGAAAT+TGG + chr3_1:37589342-37589361 Msa0357080:intron 30.0%
TTCAAAGAAATTGGACAGTT+TGG + chr3_1:37589351-37589370 Msa0357080:intron 30.0%
TCTATGCATTTGATAAGGAA+GGG - chr3_1:37589484-37589503 None:intergenic 30.0%
!! ACTAATTGTTTTGTACTGGT+TGG + chr3_1:37589546-37589565 Msa0357080:intron 30.0%
TACTGTTCTATACACTTGAT+CGG + chr3_1:37589576-37589595 Msa0357080:intron 30.0%
GCAAACTATAAACAGAAAAC+TGG - chr3_1:37589663-37589682 None:intergenic 30.0%
ATTGAGATCTTACCTAAGAT+AGG - chr3_1:37589789-37589808 None:intergenic 30.0%
GTCTAATGTCATACAGAATA+AGG - chr3_1:37589832-37589851 None:intergenic 30.0%
! TATTTCTTGCTTTGAATCAC+AGG + chr3_1:37589866-37589885 Msa0357080:intron 30.0%
TTAGACCACATAGAATAATC+AGG - chr3_1:37589998-37590017 None:intergenic 30.0%
! TTTCTTTATGATCTGAGATG+AGG - chr3_1:37590029-37590048 None:intergenic 30.0%
ATTTACTCACCATTAGAAGT+AGG - chr3_1:37590088-37590107 None:intergenic 30.0%
GTAAATACCTAGATGATCAA+TGG + chr3_1:37590102-37590121 Msa0357080:intron 30.0%
! ATTTTACAAAAACATCCTGG+AGG + chr3_1:37590222-37590241 Msa0357080:CDS 30.0%
TACATAGATACTGATAAAGC+TGG + chr3_1:37590368-37590387 Msa0357080:intron 30.0%
TGGTTCTTCATATAGATCTT+TGG + chr3_1:37590388-37590407 Msa0357080:intron 30.0%
GGTTCTTCATATAGATCTTT+GGG + chr3_1:37590389-37590408 Msa0357080:intron 30.0%
GTTCTTCATATAGATCTTTG+GGG + chr3_1:37590390-37590409 Msa0357080:intron 30.0%
! CACAATAACCCTTTTCATAT+AGG - chr3_1:37590624-37590643 None:intergenic 30.0%
! ATAACCTTCTAAAGATCTAC+GGG - chr3_1:37590785-37590804 None:intergenic 30.0%
! GATAACCTTCTAAAGATCTA+CGG - chr3_1:37590786-37590805 None:intergenic 30.0%
!! ACTAGCAAAGGCTTTAAAAT+AGG - chr3_1:37590842-37590861 None:intergenic 30.0%
CATTATCATCTCATAGTTGA+TGG + chr3_1:37591254-37591273 Msa0357080:intron 30.0%
AGATAGCAATAGATAGTAGT+GGG + chr3_1:37591301-37591320 Msa0357080:intron 30.0%
!! GTTTCCAAATCATTTTAGTG+TGG + chr3_1:37591401-37591420 Msa0357080:intron 30.0%
CTGATTAAATAATACTCCTC+TGG + chr3_1:37591480-37591499 Msa0357080:intron 30.0%
!! ATTTTTGAAAGTGCACTTCA+TGG - chr3_1:37591640-37591659 None:intergenic 30.0%
AGTTGTAGGATTGAGTAATT+TGG - chr3_1:37591767-37591786 None:intergenic 30.0%
TTACTCAATCCTACAACTTT+AGG + chr3_1:37591769-37591788 Msa0357080:intron 30.0%
CTGAAACAAAGTGTATTGTT+GGG + chr3_1:37591932-37591951 Msa0357080:CDS 30.0%
TCAATCAATCCAAAAACAGT+TGG - chr3_1:37592313-37592332 None:intergenic 30.0%
AAAGACAGGGACTAATTTGA+TGG - chr3_1:37584410-37584429 None:intergenic 35.0%
GAGAATTTGGTACAAAGACA+GGG - chr3_1:37584423-37584442 None:intergenic 35.0%
TGAGAATTTGGTACAAAGAC+AGG - chr3_1:37584424-37584443 None:intergenic 35.0%
CAGAGACCAATTTGAGAATT+TGG - chr3_1:37584436-37584455 None:intergenic 35.0%
GTCGTAGAAAGAGAAAACAA+AGG + chr3_1:37584671-37584690 Msa0357080:CDS 35.0%
CAGTGACAGTGAAAAGAAAA+AGG - chr3_1:37584786-37584805 None:intergenic 35.0%
TCCTAGCTAAGCAAATTGTT+TGG + chr3_1:37585004-37585023 Msa0357080:intron 35.0%
! TCCAAACAATTTGCTTAGCT+AGG - chr3_1:37585008-37585027 None:intergenic 35.0%
GGAATTAAACTCAAGTTCTC+CGG - chr3_1:37585073-37585092 None:intergenic 35.0%
GAGAACTTGAGTTTAATTCC+CGG + chr3_1:37585073-37585092 Msa0357080:intron 35.0%
AGAACTTGAGTTTAATTCCC+GGG + chr3_1:37585074-37585093 Msa0357080:intron 35.0%
CAATAATTGTTCTTCTACCC+GGG - chr3_1:37585094-37585113 None:intergenic 35.0%
CCAATAATTGTTCTTCTACC+CGG - chr3_1:37585095-37585114 None:intergenic 35.0%
! TTTATTTGGTGATAACCCTC+TGG - chr3_1:37585156-37585175 None:intergenic 35.0%
!! AGCTATTCCTTTGAAGTGAT+TGG + chr3_1:37585206-37585225 Msa0357080:intron 35.0%
ATCTTAGCTAAGCAAGTGAT+TGG + chr3_1:37585255-37585274 Msa0357080:intron 35.0%
AAGTGATTGGACGAATCATT+CGG + chr3_1:37585268-37585287 Msa0357080:intron 35.0%
CTTTAAACACCATTGCATTG+CGG + chr3_1:37585363-37585382 Msa0357080:intron 35.0%
TGTCTTCAACTTATTGCTAC+TGG + chr3_1:37585472-37585491 Msa0357080:intron 35.0%
CGTTGTCATTCCGAAATTTA+GGG - chr3_1:37585527-37585546 None:intergenic 35.0%
TCGTTGTCATTCCGAAATTT+AGG - chr3_1:37585528-37585547 None:intergenic 35.0%
!!! CTATTTTGAAACCATGGAGT+TGG + chr3_1:37585698-37585717 Msa0357080:intron 35.0%
! CTGTTCACTATGTTTTACCA+AGG + chr3_1:37585957-37585976 Msa0357080:intron 35.0%
ATCAGGAAAACCTTTCAAAG+AGG - chr3_1:37586004-37586023 None:intergenic 35.0%
TAATAACATACAAGACAGGG+TGG + chr3_1:37586025-37586044 Msa0357080:intron 35.0%
AACTGCAAATCAATTGGGAT+TGG - chr3_1:37586051-37586070 None:intergenic 35.0%
CCTAAGAATGACAGTGTAAA+GGG - chr3_1:37586135-37586154 None:intergenic 35.0%
CCTTTACACTGTCATTCTTA+GGG + chr3_1:37586133-37586152 Msa0357080:intron 35.0%
CTTTACACTGTCATTCTTAG+GGG + chr3_1:37586134-37586153 Msa0357080:intron 35.0%
GTCATTCTTAGGGGATAAAT+TGG + chr3_1:37586143-37586162 Msa0357080:intron 35.0%
GAAATGCATAATTGAGAACC+TGG + chr3_1:37586181-37586200 Msa0357080:intron 35.0%
ACTGCTATTGAATTAGGTTC+TGG + chr3_1:37586419-37586438 Msa0357080:CDS 35.0%
! ATTGAATTAGGTTCTGGTGT+TGG + chr3_1:37586425-37586444 Msa0357080:CDS 35.0%
! ATAGAAGAACGCATTGATAG+AGG - chr3_1:37586827-37586846 None:intergenic 35.0%
GTGATTATGTTAGGATAAGG+AGG - chr3_1:37586954-37586973 None:intergenic 35.0%
ACTGAGTGTGTGATTATGTT+AGG - chr3_1:37586963-37586982 None:intergenic 35.0%
ATAATCACACACTCAGTCAT+AGG + chr3_1:37586966-37586985 Msa0357080:intron 35.0%
GTAGAAACTGAACCATAAAC+AGG - chr3_1:37587079-37587098 None:intergenic 35.0%
GGTTTGGCAAAAAATAGGTT+TGG - chr3_1:37587127-37587146 None:intergenic 35.0%
! AAAGCGGTTTGGCAAAAAAT+AGG - chr3_1:37587132-37587151 None:intergenic 35.0%
!!! ATTTTTTGCCAAACCGCTTT+TGG + chr3_1:37587132-37587151 Msa0357080:intron 35.0%
GCAAAAGCCGTTAATTAAAC+TGG - chr3_1:37587298-37587317 None:intergenic 35.0%
GTGATTTATGGTAACAAGGA+TGG - chr3_1:37587789-37587808 None:intergenic 35.0%
TCATGACATGAGCTATCAAA+GGG - chr3_1:37587918-37587937 None:intergenic 35.0%
TTCATGACATGAGCTATCAA+AGG - chr3_1:37587919-37587938 None:intergenic 35.0%
CTAATAAGAACACTTCATGC+AGG - chr3_1:37588095-37588114 None:intergenic 35.0%
GGAACATATCTAGTGAGAAA+GGG + chr3_1:37588164-37588183 Msa0357080:intron 35.0%
ATCCGTGTATTTATATCCGA+TGG - chr3_1:37588231-37588250 None:intergenic 35.0%
AATGTGTGGTAGTTGAAAAG+TGG - chr3_1:37588278-37588297 None:intergenic 35.0%
AAGGTGATATCACAATGGAT+CGG - chr3_1:37588351-37588370 None:intergenic 35.0%
!!! TGCCCTTTTTTTAGAAGTTG+TGG - chr3_1:37588408-37588427 None:intergenic 35.0%
AGAAGTTGTGGTTTCAAACA+GGG - chr3_1:37588508-37588527 None:intergenic 35.0%
TAGAAGTTGTGGTTTCAAAC+AGG - chr3_1:37588397-37588416 None:intergenic 35.0%
TTGAGAAGAAGTCAATTCGT+AGG + chr3_1:37588555-37588574 Msa0357080:intron 35.0%
GTTGAAAATTGGGTAAATCG+TGG + chr3_1:37588577-37588596 Msa0357080:intron 35.0%
! AATCTGTACTCATGACTTGT+CGG + chr3_1:37588642-37588661 Msa0357080:intron 35.0%
AAAAGAGGAATAAAGGAGGA+GGG + chr3_1:37588817-37588836 Msa0357080:intron 35.0%
TATCCTTATGTGAGAACAAG+AGG - chr3_1:37589035-37589054 None:intergenic 35.0%
AAATAATGTGTCATCGTGAC+AGG - chr3_1:37589113-37589132 None:intergenic 35.0%
!! GAAGATTTTCAAGGAGATGT+TGG - chr3_1:37589398-37589417 None:intergenic 35.0%
TAAGGAAGGGAAAATGCATT+TGG - chr3_1:37589471-37589490 None:intergenic 35.0%
GTCTATGCATTTGATAAGGA+AGG - chr3_1:37589485-37589504 None:intergenic 35.0%
! GTTGGTCTATGCATTTGATA+AGG - chr3_1:37589489-37589508 None:intergenic 35.0%
! TATTGGTTGGCATATGATGT+TGG - chr3_1:37589507-37589526 None:intergenic 35.0%
GGTCTCTAAGTTATATTGGT+TGG - chr3_1:37589520-37589539 None:intergenic 35.0%
ACTGTTCTATACACTTGATC+GGG + chr3_1:37589577-37589596 Msa0357080:intron 35.0%
TGAAAACATTAGAAGCTGAG+AGG + chr3_1:37589603-37589622 Msa0357080:intron 35.0%
ATCTTACCTAAGATAGGAAG+GGG - chr3_1:37589783-37589802 None:intergenic 35.0%
GATCTTACCTAAGATAGGAA+GGG - chr3_1:37589784-37589803 None:intergenic 35.0%
AGATCTTACCTAAGATAGGA+AGG - chr3_1:37589785-37589804 None:intergenic 35.0%
TGTATGACATTAGACCTTGA+CGG + chr3_1:37589837-37589856 Msa0357080:intron 35.0%
CTTTGAATCACAGGTATTAC+CGG + chr3_1:37589875-37589894 Msa0357080:intron 35.0%
CAACTTTATTGCAGAATCTG+TGG - chr3_1:37589910-37589929 None:intergenic 35.0%
CCTTAAGCACTTCTTCATTA+TGG - chr3_1:37589943-37589962 None:intergenic 35.0%
!! CCATAATGAAGAAGTGCTTA+AGG + chr3_1:37589940-37589959 Msa0357080:CDS 35.0%
!! AATGAAGAAGTGCTTAAGGT+AGG + chr3_1:37589944-37589963 Msa0357080:intron 35.0%
!! ATGAAGAAGTGCTTAAGGTA+GGG + chr3_1:37589945-37589964 Msa0357080:intron 35.0%
TAAGGTAGGGTTATAACACA+TGG + chr3_1:37589958-37589977 Msa0357080:intron 35.0%
TCCTTCCTGATTATTCTATG+TGG + chr3_1:37589990-37590009 Msa0357080:intron 35.0%
ACCACATAGAATAATCAGGA+AGG - chr3_1:37589994-37590013 None:intergenic 35.0%
GAAGTAGGACTAATATTCTC+AGG - chr3_1:37590073-37590092 None:intergenic 35.0%
GTATCTTCCATTGATCATCT+AGG - chr3_1:37590112-37590131 None:intergenic 35.0%
TAGTAGCAGAGAAACTAGAA+TGG + chr3_1:37590175-37590194 Msa0357080:CDS 35.0%
AGTAGCAGAGAAACTAGAAT+GGG + chr3_1:37590176-37590195 Msa0357080:CDS 35.0%
! TTGCAAGCCATCATACTTTT+AGG - chr3_1:37590338-37590357 None:intergenic 35.0%
! AGTATGATGGCTTGCAATAT+AGG + chr3_1:37590341-37590360 Msa0357080:intron 35.0%
! GTATGATGGCTTGCAATATA+GGG + chr3_1:37590342-37590361 Msa0357080:intron 35.0%
!!! CTTTGGGGTAATAGTCATTT+TGG + chr3_1:37590405-37590424 Msa0357080:intron 35.0%
! AAGGGTTATTGTGAGTATTG+AGG + chr3_1:37590631-37590650 Msa0357080:intron 35.0%
!! AGGGTTATTGTGAGTATTGA+GGG + chr3_1:37590632-37590651 Msa0357080:intron 35.0%
ATGAACAAAGTGCACAATCA+GGG + chr3_1:37590682-37590701 Msa0357080:intron 35.0%
! TAACCTTCTAAAGATCTACG+GGG - chr3_1:37590784-37590803 None:intergenic 35.0%
GAAAGCTTGTGATTGTGTTA+AGG - chr3_1:37591042-37591061 None:intergenic 35.0%
TAACGGTATCAAACAGCAAA+GGG - chr3_1:37591078-37591097 None:intergenic 35.0%
CAGATAGCAATAGATAGTAG+TGG + chr3_1:37591300-37591319 Msa0357080:intron 35.0%
TGGACCACACTAAAATGATT+TGG - chr3_1:37591408-37591427 None:intergenic 35.0%
! TCGTTTATATTTGAGACCAG+AGG - chr3_1:37591499-37591518 None:intergenic 35.0%
ATGCTTAAAATCAAGACCCA+AGG + chr3_1:37591714-37591733 Msa0357080:intron 35.0%
TGCTTAAAATCAAGACCCAA+GGG + chr3_1:37591715-37591734 Msa0357080:intron 35.0%
AAATTGGACTTTACTCCCTT+GGG - chr3_1:37591733-37591752 None:intergenic 35.0%
TTTGGAGGAAGTTCAGAAAT+TGG - chr3_1:37591749-37591768 None:intergenic 35.0%
TGTAGGATTGAGTAATTTGG+AGG - chr3_1:37591764-37591783 None:intergenic 35.0%
CACATAGTTCCTAAAGTTGT+AGG - chr3_1:37591781-37591800 None:intergenic 35.0%
ACTAAGATTTCTCTTACTGC+AGG + chr3_1:37591851-37591870 Msa0357080:intron 35.0%
TAAGTTTCAGATGCAGATGA+AGG + chr3_1:37591903-37591922 Msa0357080:CDS 35.0%
! CCAACAATACACTTTGTTTC+AGG - chr3_1:37591934-37591953 None:intergenic 35.0%
CCTGAAACAAAGTGTATTGT+TGG + chr3_1:37591931-37591950 Msa0357080:CDS 35.0%
TGTATTGTTGGGAATCATGA+AGG + chr3_1:37591943-37591962 Msa0357080:CDS 35.0%
!! AACTGATTTGACTTGAGCAT+TGG + chr3_1:37592052-37592071 Msa0357080:three_prime_UTR 35.0%
TTGTCTGCAATGATTGACAA+GGG - chr3_1:37592118-37592137 None:intergenic 35.0%
AAGATGACTCAAGAAATCCA+TGG + chr3_1:37592145-37592164 Msa0357080:three_prime_UTR 35.0%
AGATGACTCAAGAAATCCAT+GGG + chr3_1:37592146-37592165 Msa0357080:three_prime_UTR 35.0%
AGAAATCCATGGGTTTGATA+TGG + chr3_1:37592156-37592175 Msa0357080:three_prime_UTR 35.0%
! TCTTTTCCATATCAAACCCA+TGG - chr3_1:37592165-37592184 None:intergenic 35.0%
! ATCTGCATTCCAACTGTTTT+TGG + chr3_1:37592301-37592320 Msa0357080:three_prime_UTR 35.0%
AATGAAACGACGTGACATGA+AGG + chr3_1:37584361-37584380 Msa0357080:five_prime_UTR 40.0%
TTTCTCTTTCTACGACGCTT+TGG - chr3_1:37584667-37584686 None:intergenic 40.0%
AGGATTGCAAAAGGAAGAAG+AGG + chr3_1:37584691-37584710 Msa0357080:CDS 40.0%
AAGGTATAGAGAGAGAGAGA+GGG - chr3_1:37584767-37584786 None:intergenic 40.0%
! AAAGGTATAGAGAGAGAGAG+AGG - chr3_1:37584768-37584787 None:intergenic 40.0%
CAAATGTGAATTCCGTAAGC+TGG - chr3_1:37584855-37584874 None:intergenic 40.0%
CAGCTTACGGAATTCACATT+TGG + chr3_1:37584853-37584872 Msa0357080:CDS 40.0%
CCGGGTAGAAGAACAATTAT+TGG + chr3_1:37585092-37585111 Msa0357080:intron 40.0%
GAATCATTCGGCTGAATTCT+GGG + chr3_1:37585280-37585299 Msa0357080:intron 40.0%
! TGTTAACCCTCTAGTTCCTA+GGG - chr3_1:37585320-37585339 None:intergenic 40.0%
TAGAGGGTTAACACCAATTG+CGG + chr3_1:37585327-37585346 Msa0357080:intron 40.0%
! GTGTTTAAAGTAGCACCTAG+GGG - chr3_1:37585353-37585372 None:intergenic 40.0%
! GGTGTTTAAAGTAGCACCTA+GGG - chr3_1:37585354-37585373 None:intergenic 40.0%
! TGGTGTTTAAAGTAGCACCT+AGG - chr3_1:37585355-37585374 None:intergenic 40.0%
TTATCTCAACCGCAATGCAA+TGG - chr3_1:37585375-37585394 None:intergenic 40.0%
TTGCATTGCGGTTGAGATAA+TGG + chr3_1:37585375-37585394 Msa0357080:intron 40.0%
! TCAACTTATTGCTACTGGCT+TGG + chr3_1:37585477-37585496 Msa0357080:intron 40.0%
CTGCTAGATATATGCAGAGA+GGG - chr3_1:37585626-37585645 None:intergenic 40.0%
ACTGCTAGATATATGCAGAG+AGG - chr3_1:37585627-37585646 None:intergenic 40.0%
ATAAGTGATTCCTCCAAGGT+GGG - chr3_1:37585654-37585673 None:intergenic 40.0%
TATAAGTGATTCCTCCAAGG+TGG - chr3_1:37585655-37585674 None:intergenic 40.0%
!!! TTTTGAAACCATGGAGTTGG+AGG + chr3_1:37585701-37585720 Msa0357080:intron 40.0%
CATTACTATTGCGGTATAGC+AGG - chr3_1:37585904-37585923 None:intergenic 40.0%
ACTTGGTTCACCTCTTTGAA+AGG + chr3_1:37585991-37586010 Msa0357080:intron 40.0%
TGACAGTGTAAAGGGTTACT+TGG - chr3_1:37586127-37586146 None:intergenic 40.0%
CCCTTTACACTGTCATTCTT+AGG + chr3_1:37586132-37586151 Msa0357080:intron 40.0%
CCCTAAGAATGACAGTGTAA+AGG - chr3_1:37586136-37586155 None:intergenic 40.0%
!! TCAGCTGACTTTGATTTGAC+AGG + chr3_1:37586323-37586342 Msa0357080:intron 40.0%
!! CAGCTGACTTTGATTTGACA+GGG + chr3_1:37586324-37586343 Msa0357080:intron 40.0%
GGTTGCACTGCTATTGAATT+AGG + chr3_1:37586413-37586432 Msa0357080:CDS 40.0%
! AGGATAAGGAGGAGTTTGTT+AGG - chr3_1:37586943-37586962 None:intergenic 40.0%
! TAGCTGAGCCAGTTTAAAAC+TGG - chr3_1:37587403-37587422 None:intergenic 40.0%
!! ATGTGGCATGTTGGTTCTAT+TGG + chr3_1:37587567-37587586 Msa0357080:intron 40.0%
TGGAACGATTAAGGTCTTCT+GGG - chr3_1:37587672-37587691 None:intergenic 40.0%
AAGACCTTAATCGTTCCACT+AGG + chr3_1:37587674-37587693 Msa0357080:intron 40.0%
AGACCTTAATCGTTCCACTA+GGG + chr3_1:37587675-37587694 Msa0357080:intron 40.0%
! TTTCTGAGGAGTTAATCAGC+TGG + chr3_1:37587830-37587849 Msa0357080:intron 40.0%
! TTCTGAGGAGTTAATCAGCT+GGG + chr3_1:37587831-37587850 Msa0357080:intron 40.0%
AATCAGATACTTTGTGGCAG+GGG - chr3_1:37587864-37587883 None:intergenic 40.0%
CAATCAGATACTTTGTGGCA+GGG - chr3_1:37587865-37587884 None:intergenic 40.0%
GAAGCCAATCAGATACTTTG+TGG - chr3_1:37587870-37587889 None:intergenic 40.0%
GGGAACATATCTAGTGAGAA+AGG + chr3_1:37588163-37588182 Msa0357080:intron 40.0%
TATCCTTATGTGAGAGTGAG+AGG + chr3_1:37588187-37588206 Msa0357080:intron 40.0%
TGATATCACAATGGATCGGA+AGG - chr3_1:37588347-37588366 None:intergenic 40.0%
! CTTCTAAAAAAAGGGCAACC+CGG + chr3_1:37588411-37588430 Msa0357080:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_1:37588477-37588496 None:intergenic 40.0%
TTGTGGTTTCAAACAGGGTA+AGG - chr3_1:37588503-37588522 None:intergenic 40.0%
TTTGATGAGTGAACAGCCAA+GGG - chr3_1:37588726-37588745 None:intergenic 40.0%
CAAAAGAGGAATAAAGGAGG+AGG + chr3_1:37588816-37588835 Msa0357080:intron 40.0%
AAAGAGGAATAAAGGAGGAG+GGG + chr3_1:37588818-37588837 Msa0357080:intron 40.0%
TGTGTGTGGTAGTTGAAAAG+TGG + chr3_1:37588950-37588969 Msa0357080:intron 40.0%
GAGGATGACATATCAACCAT+TGG - chr3_1:37589016-37589035 None:intergenic 40.0%
CATCCTCTTGTTCTCACATA+AGG + chr3_1:37589029-37589048 Msa0357080:intron 40.0%
GGAGCATATCTAGTGAGAAA+GGG - chr3_1:37589058-37589077 None:intergenic 40.0%
TGACAGGTTGTATAGTGGTA+AGG - chr3_1:37589097-37589116 None:intergenic 40.0%
TCCAGCATACTTCTGATGAT+TGG + chr3_1:37589246-37589265 Msa0357080:intron 40.0%
! TCCAATCATCAGAAGTATGC+TGG - chr3_1:37589250-37589269 None:intergenic 40.0%
AGCATACTTCTGATGATTGG+AGG + chr3_1:37589249-37589268 Msa0357080:intron 40.0%
GCATACTTCTGATGATTGGA+GGG + chr3_1:37589250-37589269 Msa0357080:intron 40.0%
TTTATCCCCCTTCCTATCTT+AGG + chr3_1:37589774-37589793 Msa0357080:intron 40.0%
TCTTACCTAAGATAGGAAGG+GGG - chr3_1:37589782-37589801 None:intergenic 40.0%
AAGAAATAATCACGCCGTCA+AGG - chr3_1:37589854-37589873 None:intergenic 40.0%
! GAATCTGTGGCAAAGTATTC+CGG - chr3_1:37589897-37589916 None:intergenic 40.0%
GTAGCAGAGAAACTAGAATG+GGG + chr3_1:37590177-37590196 Msa0357080:CDS 40.0%
TGACTACTCGTTACACATTC+AGG - chr3_1:37590432-37590451 None:intergenic 40.0%
TGAGGGATTATGTTAGTGTC+AGG + chr3_1:37590649-37590668 Msa0357080:intron 40.0%
GAGGGATTATGTTAGTGTCA+GGG + chr3_1:37590650-37590669 Msa0357080:intron 40.0%
AGGGATTATGTTAGTGTCAG+GGG + chr3_1:37590651-37590670 Msa0357080:intron 40.0%
GATGAACAAAGTGCACAATC+AGG + chr3_1:37590681-37590700 Msa0357080:intron 40.0%
TGACTACTCCTTACACATTC+AGG + chr3_1:37590741-37590760 Msa0357080:intron 40.0%
GACTACTCCTTACACATTCA+GGG + chr3_1:37590742-37590761 Msa0357080:intron 40.0%
! TTTTGGTCCCTGAATGTGTA+AGG - chr3_1:37590752-37590771 None:intergenic 40.0%
! CTACGGGGTAATAGTCATTT+TGG - chr3_1:37590769-37590788 None:intergenic 40.0%
TTACCCCGTAGATCTTTAGA+AGG + chr3_1:37590778-37590797 Msa0357080:intron 40.0%
AAAGCCTTTGCTAGTTGTCA+TGG + chr3_1:37590847-37590866 Msa0357080:intron 40.0%
ATAGCCATGACAACTAGCAA+AGG - chr3_1:37590854-37590873 None:intergenic 40.0%
CTAACGGTATCAAACAGCAA+AGG - chr3_1:37591079-37591098 None:intergenic 40.0%
CATCTTAGCTCGTGATACAT+AGG - chr3_1:37591149-37591168 None:intergenic 40.0%
!! GAGCATAGCTCAGTTGATAA+GGG - chr3_1:37591575-37591594 None:intergenic 40.0%
! TGAGCATAGCTCAGTTGATA+AGG - chr3_1:37591576-37591595 None:intergenic 40.0%
TATCAACTGAGCTATGCTCA+CGG + chr3_1:37591576-37591595 Msa0357080:intron 40.0%
GAAATTGGACTTTACTCCCT+TGG - chr3_1:37591734-37591753 None:intergenic 40.0%
AGATTTCTCTTACTGCAGGA+TGG + chr3_1:37591855-37591874 Msa0357080:intron 40.0%
TGCTCAAGTCAAATCAGTTC+TGG - chr3_1:37592051-37592070 None:intergenic 40.0%
!!! TTGAGCATTGGCTAGTGTTT+TGG + chr3_1:37592064-37592083 Msa0357080:three_prime_UTR 40.0%
!!! GTGTTTTGGTTCGAACTGAA+AGG + chr3_1:37592078-37592097 Msa0357080:three_prime_UTR 40.0%
TGCAATGATTGACAAGGGTA+GGG - chr3_1:37592113-37592132 None:intergenic 40.0%
GTTGTCTGCAATGATTGACA+AGG - chr3_1:37592119-37592138 None:intergenic 40.0%
AGTTATTAGCAGAGTCGGTC+AGG + chr3_1:37584504-37584523 Msa0357080:five_prime_UTR 45.0%
AGGTATAGAGAGAGAGAGAG+GGG - chr3_1:37584766-37584785 None:intergenic 45.0%
TAATGAGTTCCGCCTGAGAA+CGG + chr3_1:37585041-37585060 Msa0357080:intron 45.0%
! ATAACCCTCTGGTTCCTAGT+CGG - chr3_1:37585145-37585164 None:intergenic 45.0%
CGAATCATTCGGCTGAATTC+TGG + chr3_1:37585279-37585298 Msa0357080:intron 45.0%
! GTTAACCCTCTAGTTCCTAG+GGG - chr3_1:37585319-37585338 None:intergenic 45.0%
! GTGTTAACCCTCTAGTTCCT+AGG - chr3_1:37585321-37585340 None:intergenic 45.0%
TAAGTGATTCCTCCAAGGTG+GGG - chr3_1:37585653-37585672 None:intergenic 45.0%
CCACGTCAAAGTTTAGGGAA+CGG - chr3_1:37585868-37585887 None:intergenic 45.0%
TTCCCTAAACTTTGACGTGG+TGG + chr3_1:37585868-37585887 Msa0357080:intron 45.0%
GAGAGAAAACTCTCCTCCTA+GGG + chr3_1:37586737-37586756 Msa0357080:intron 45.0%
ATTGAAAAAGGGGGAACCCT+AGG - chr3_1:37586756-37586775 None:intergenic 45.0%
! ATTCTGCTTTGTTCCCCATC+AGG + chr3_1:37587013-37587032 Msa0357080:intron 45.0%
! TTCTGCTTTGTTCCCCATCA+GGG + chr3_1:37587014-37587033 Msa0357080:intron 45.0%
CCACTAAACCAAAAGCGGTT+TGG - chr3_1:37587143-37587162 None:intergenic 45.0%
!!! CCAAACCGCTTTTGGTTTAG+TGG + chr3_1:37587140-37587159 Msa0357080:intron 45.0%
CCAGACCACTAAACCAAAAG+CGG - chr3_1:37587148-37587167 None:intergenic 45.0%
GGAACGATTAAGGTCTTCTG+GGG - chr3_1:37587671-37587690 None:intergenic 45.0%
GTGGAACGATTAAGGTCTTC+TGG - chr3_1:37587673-37587692 None:intergenic 45.0%
TTTATTGATCAGGGCCCTAG+TGG - chr3_1:37587692-37587711 None:intergenic 45.0%
ATCAGATACTTTGTGGCAGG+GGG - chr3_1:37587863-37587882 None:intergenic 45.0%
CCAATCAGATACTTTGTGGC+AGG - chr3_1:37587866-37587885 None:intergenic 45.0%
! CCTGCCACAAAGTATCTGAT+TGG + chr3_1:37587863-37587882 Msa0357080:intron 45.0%
CATCCTCTCACTCTCACATA+AGG - chr3_1:37588193-37588212 None:intergenic 45.0%
GGTGGAAGGTGATATCACAA+TGG - chr3_1:37588356-37588375 None:intergenic 45.0%
GAAGTTGTGGTTTCAAACGG+TGG - chr3_1:37588395-37588414 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_1:37588478-37588497 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr3_1:37588481-37588500 None:intergenic 45.0%
GTTTGATGAGTGAACAGCCA+AGG - chr3_1:37588727-37588746 None:intergenic 45.0%
AAGAGGAATAAAGGAGGAGG+GGG + chr3_1:37588819-37588838 Msa0357080:intron 45.0%
TGTGAAGAACAAGGTCTGAG+AGG + chr3_1:37588861-37588880 Msa0357080:intron 45.0%
TCTGAGAGGTTTGATGAAGC+AGG + chr3_1:37588875-37588894 Msa0357080:intron 45.0%
AGAGGTTTGATGAAGCAGGA+TGG + chr3_1:37588879-37588898 Msa0357080:intron 45.0%
GAGGTTTGATGAAGCAGGAT+GGG + chr3_1:37588880-37588899 Msa0357080:intron 45.0%
! GGGAGCATATCTAGTGAGAA+AGG - chr3_1:37589059-37589078 None:intergenic 45.0%
CATCGTGACAGGTTGTATAG+TGG - chr3_1:37589102-37589121 None:intergenic 45.0%
!! GAGGGCATTACAAAACATGC+TGG + chr3_1:37589268-37589287 Msa0357080:intron 45.0%
! GACAGTTTGGTTAGCTCCTT+CGG + chr3_1:37589364-37589383 Msa0357080:intron 45.0%
! GATGTTGGTTAATGCACCGA+AGG - chr3_1:37589383-37589402 None:intergenic 45.0%
GGTAGGGTTATAACACATGG+TGG + chr3_1:37589961-37589980 Msa0357080:intron 45.0%
ACACTGCTCGAAAAAGACGT+CGG - chr3_1:37590809-37590828 None:intergenic 45.0%
AACTTGCAGGAGCTGTCTAA+CGG - chr3_1:37591095-37591114 None:intergenic 45.0%
!! TTCTGCCTTCGTTAACTTGC+AGG - chr3_1:37591108-37591127 None:intergenic 45.0%
ATCAACTGAGCTATGCTCAC+GGG + chr3_1:37591577-37591596 Msa0357080:intron 45.0%
TCATATGCCATGTCTGCTTC+TGG - chr3_1:37592025-37592044 None:intergenic 45.0%
CTGCAATGATTGACAAGGGT+AGG - chr3_1:37592114-37592133 None:intergenic 45.0%
!! TACAAAAAAAATAAAAATAA+AGG + chr3_1:37587096-37587115 Msa0357080:intron 5.0%
!!! ATTACAATATTAATTTTATT+TGG - chr3_1:37590981-37591000 None:intergenic 5.0%
AGTCGGTCAGGACCAATTTG+AGG + chr3_1:37584516-37584535 Msa0357080:five_prime_UTR 50.0%
TATAGAGAGAGAGAGAGGGG+GGG - chr3_1:37584763-37584782 None:intergenic 50.0%
GTATAGAGAGAGAGAGAGGG+GGG - chr3_1:37584764-37584783 None:intergenic 50.0%
GGTATAGAGAGAGAGAGAGG+GGG - chr3_1:37584765-37584784 None:intergenic 50.0%
GTCGGACTTTACTTCCCTCT+CGG + chr3_1:37585114-37585133 Msa0357080:intron 50.0%
CGGCTGAATTCTGGGTTTCT+AGG + chr3_1:37585288-37585307 Msa0357080:intron 50.0%
ATCTCTCGTCCTCATCTGTG+AGG + chr3_1:37585589-37585608 Msa0357080:intron 50.0%
GACTGAAAGCCTCACAGATG+AGG - chr3_1:37585601-37585620 None:intergenic 50.0%
TCTAGCAGTATTCCCCACCT+TGG + chr3_1:37585638-37585657 Msa0357080:intron 50.0%
! AATGTTGGCCTCCAACTCCA+TGG - chr3_1:37585712-37585731 None:intergenic 50.0%
CCGTTCCCTAAACTTTGACG+TGG + chr3_1:37585865-37585884 Msa0357080:intron 50.0%
GGCCACCACGTCAAAGTTTA+GGG - chr3_1:37585873-37585892 None:intergenic 50.0%
TGGCCACCACGTCAAAGTTT+AGG - chr3_1:37585874-37585893 None:intergenic 50.0%
!! CTTTGATTTGACAGGGCAGC+TGG + chr3_1:37586331-37586350 Msa0357080:CDS 50.0%
ATTTGACAGGGCAGCTGGTA+TGG + chr3_1:37586336-37586355 Msa0357080:CDS 50.0%
TCATTCAGCAACATGGCTCC+AGG - chr3_1:37586362-37586381 None:intergenic 50.0%
GGAGAGAAAACTCTCCTCCT+AGG + chr3_1:37586736-37586755 Msa0357080:intron 50.0%
! TCTGCTTTGTTCCCCATCAG+GGG + chr3_1:37587015-37587034 Msa0357080:intron 50.0%
AAATCCTGCACACCCCTGAT+GGG - chr3_1:37587030-37587049 None:intergenic 50.0%
!!! CCGCTTTTGGTTTAGTGGTC+TGG + chr3_1:37587145-37587164 Msa0357080:intron 50.0%
!! TTCTGGGGTATTGCAGCTGA+CGG - chr3_1:37587656-37587675 None:intergenic 50.0%
AGGAGTTAATCAGCTGGGCA+TGG + chr3_1:37587836-37587855 Msa0357080:intron 50.0%
AATGTTCACGTACAGCCCCT+TGG + chr3_1:37588052-37588071 Msa0357080:intron 50.0%
! TGCAGGAAGAGAGTGTACGA+GGG - chr3_1:37588078-37588097 None:intergenic 50.0%
! ATGCAGGAAGAGAGTGTACG+AGG - chr3_1:37588079-37588098 None:intergenic 50.0%
ACCTTCCACCTCCTCAATCT+AGG + chr3_1:37588366-37588385 Msa0357080:intron 50.0%
AACGGTGGAAGCCTAGATTG+AGG - chr3_1:37588380-37588399 None:intergenic 50.0%
! TCATGACTTGTCGGAGACCA+TGG + chr3_1:37588651-37588670 Msa0357080:intron 50.0%
! GAGAGATTTTGCGGTCACGA+AGG - chr3_1:37588700-37588719 None:intergenic 50.0%
! CAAGGGAGGGAGAGATTTTG+CGG - chr3_1:37588709-37588728 None:intergenic 50.0%
ATGAGTGAACAGCCAAGGGA+GGG - chr3_1:37588722-37588741 None:intergenic 50.0%
AATAAAGGAGGAGGGGGTCA+TGG + chr3_1:37588825-37588844 Msa0357080:intron 50.0%
GAAGCAGGATGGGAAAGAGA+AGG + chr3_1:37588890-37588909 Msa0357080:intron 50.0%
AGGATGGGAAAGAGAAGGTG+AGG + chr3_1:37588895-37588914 Msa0357080:intron 50.0%
GGATGGGAAAGAGAAGGTGA+GGG + chr3_1:37588896-37588915 Msa0357080:intron 50.0%
GATGGGAAAGAGAAGGTGAG+GGG + chr3_1:37588897-37588916 Msa0357080:intron 50.0%
AGCTGAGAGGCTAAGACGTT+AGG + chr3_1:37589616-37589635 Msa0357080:intron 50.0%
GCTGAGAGGCTAAGACGTTA+GGG + chr3_1:37589617-37589636 Msa0357080:intron 50.0%
CCACACGTAGATCTAAACGC+TGG - chr3_1:37589694-37589713 None:intergenic 50.0%
CCAGCGTTTAGATCTACGTG+TGG + chr3_1:37589691-37589710 Msa0357080:intron 50.0%
AGAACGAAGTCGAAACCTCC+AGG - chr3_1:37590240-37590259 None:intergenic 50.0%
GGAGGTTTCGACTTCGTTCT+TGG + chr3_1:37590240-37590259 Msa0357080:CDS 50.0%
CACTGCTCGAAAAAGACGTC+GGG - chr3_1:37590808-37590827 None:intergenic 50.0%
CAGCTCCTGCAAGTTAACGA+AGG + chr3_1:37591100-37591119 Msa0357080:intron 50.0%
GAGGTTTCCAGAAGCAGACA+TGG + chr3_1:37592015-37592034 Msa0357080:three_prime_UTR 50.0%
CGGAATGATCCGTTCTCAGG+CGG - chr3_1:37585053-37585072 None:intergenic 55.0%
CGCCTGAGAACGGATCATTC+CGG + chr3_1:37585051-37585070 Msa0357080:intron 55.0%
CTCCGGAATGATCCGTTCTC+AGG - chr3_1:37585056-37585075 None:intergenic 55.0%
! ACCCTCTAGTTCCTAGGGGA+GGG - chr3_1:37585315-37585334 None:intergenic 55.0%
! AACCCTCTAGTTCCTAGGGG+AGG - chr3_1:37585316-37585335 None:intergenic 55.0%
TAACACCAATTGCGGCCCCT+AGG + chr3_1:37585335-37585354 Msa0357080:intron 55.0%
AGCAGTATTCCCCACCTTGG+AGG + chr3_1:37585641-37585660 Msa0357080:intron 55.0%
GCGGTATAGCAGGTGCAGTA+TGG - chr3_1:37585894-37585913 None:intergenic 55.0%
GAAAAAGGGGGAACCCTAGG+AGG - chr3_1:37586753-37586772 None:intergenic 55.0%
AATCCTGCACACCCCTGATG+GGG - chr3_1:37587029-37587048 None:intergenic 55.0%
CAAATCCTGCACACCCCTGA+TGG - chr3_1:37587031-37587050 None:intergenic 55.0%
! CATCAGGGGTGTGCAGGATT+TGG + chr3_1:37587029-37587048 Msa0357080:intron 55.0%
! GGGTATTGCAGCTGACGGAT+CGG - chr3_1:37587651-37587670 None:intergenic 55.0%
GGGCCCTAGTGGAACGATTA+AGG - chr3_1:37587681-37587700 None:intergenic 55.0%
! AGAGAGTGTACGAGGGCCAA+GGG - chr3_1:37588071-37588090 None:intergenic 55.0%
! AAGAGAGTGTACGAGGGCCA+AGG - chr3_1:37588072-37588091 None:intergenic 55.0%
GCCTAGATTGAGGAGGTGGA+AGG - chr3_1:37588370-37588389 None:intergenic 55.0%
GGAAGCCTAGATTGAGGAGG+TGG - chr3_1:37588374-37588393 None:intergenic 55.0%
GGTGGAAGCCTAGATTGAGG+AGG - chr3_1:37588377-37588396 None:intergenic 55.0%
ACTGAAGCTCCCGCATATGC+AGG + chr3_1:37588437-37588456 Msa0357080:intron 55.0%
CTGAAGCTCCCGCATATGCA+GGG + chr3_1:37588438-37588457 Msa0357080:intron 55.0%
! TTTTGCGGTCACGAAGGCCA+CGG - chr3_1:37588694-37588713 None:intergenic 55.0%
CGCAAAATCTCTCCCTCCCT+TGG + chr3_1:37588707-37588726 Msa0357080:intron 55.0%
GATGAGTGAACAGCCAAGGG+AGG - chr3_1:37588723-37588742 None:intergenic 55.0%
! CCTCTGGTTCCTAGTCGGAG+GGG - chr3_1:37585140-37585159 None:intergenic 60.0%
! CCCTCTGGTTCCTAGTCGGA+GGG - chr3_1:37585141-37585160 None:intergenic 60.0%
CCCTCCGACTAGGAACCAGA+GGG + chr3_1:37585138-37585157 Msa0357080:intron 60.0%
! ACCCTCTGGTTCCTAGTCGG+AGG - chr3_1:37585142-37585161 None:intergenic 60.0%
! CCCTCTAGTTCCTAGGGGAG+GGG - chr3_1:37585314-37585333 None:intergenic 60.0%
CCCCTCCCCTAGGAACTAGA+GGG + chr3_1:37585311-37585330 Msa0357080:intron 60.0%
TAGCACCTAGGGGCCGCAAT+TGG - chr3_1:37585343-37585362 None:intergenic 60.0%
! GAGAGTGTACGAGGGCCAAG+GGG - chr3_1:37588070-37588089 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr3_1:37588433-37588452 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr3_1:37588449-37588468 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr3_1:37588450-37588469 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr3_1:37588449-37588468 Msa0357080:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr3_1:37588450-37588469 Msa0357080:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_1:37588465-37588484 None:intergenic 60.0%
TGAAGAGGGTGAGGCGACCA+TGG - chr3_1:37588671-37588690 None:intergenic 60.0%
CACGAAGGCCACGGTGAAGA+GGG - chr3_1:37588685-37588704 None:intergenic 60.0%
TCACGAAGGCCACGGTGAAG+AGG - chr3_1:37588686-37588705 None:intergenic 60.0%
AAGGAGGAGGGGGTCATGGT+AGG + chr3_1:37588829-37588848 Msa0357080:intron 60.0%
CCCCTCCGACTAGGAACCAG+AGG + chr3_1:37585137-37585156 Msa0357080:intron 65.0%
! GGTTTCTAGGCCCCTCCCCT+AGG + chr3_1:37585301-37585320 Msa0357080:intron 65.0%
GCCCCTCCCCTAGGAACTAG+AGG + chr3_1:37585310-37585329 Msa0357080:intron 65.0%
ACAGGGCAGCTGGTATGGCC+TGG + chr3_1:37586341-37586360 Msa0357080:CDS 65.0%
! GTTCCCCATCAGGGGTGTGC+AGG + chr3_1:37587023-37587042 Msa0357080:intron 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr3_1:37588432-37588451 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr3_1:37588443-37588462 Msa0357080:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr3_1:37588444-37588463 Msa0357080:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr3_1:37588448-37588467 Msa0357080:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_1:37588463-37588482 Msa0357080:intron 65.0%
TCGCCTCACCCTCTTCACCG+TGG + chr3_1:37588674-37588693 Msa0357080:intron 65.0%
AGGCCACGGTGAAGAGGGTG+AGG - chr3_1:37588680-37588699 None:intergenic 65.0%
CCTAGTCGGAGGGGCCGAGA+GGG - chr3_1:37585131-37585150 None:intergenic 70.0%
TCCTAGTCGGAGGGGCCGAG+AGG - chr3_1:37585132-37585151 None:intergenic 70.0%
CCCTCTCGGCCCCTCCGACT+AGG + chr3_1:37585128-37585147 Msa0357080:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 37584330 37592371 37584330 ID=Msa0357080;Name=Msa0357080
chr3_1 mRNA 37584330 37592371 37584330 ID=Msa0357080-mRNA-1;Parent=Msa0357080;Name=Msa0357080-mRNA-1;_AED=0.09;_eAED=0.09;_QI=329|0.83|0.85|1|0.83|0.85|7|378|217
chr3_1 exon 37584330 37584753 37584330 ID=Msa0357080-mRNA-1:exon:6867;Parent=Msa0357080-mRNA-1
chr3_1 exon 37584849 37584916 37584849 ID=Msa0357080-mRNA-1:exon:6868;Parent=Msa0357080-mRNA-1
chr3_1 exon 37586327 37586446 37586327 ID=Msa0357080-mRNA-1:exon:6869;Parent=Msa0357080-mRNA-1
chr3_1 exon 37589888 37589961 37589888 ID=Msa0357080-mRNA-1:exon:6870;Parent=Msa0357080-mRNA-1
chr3_1 exon 37590037 37590097 37590037 ID=Msa0357080-mRNA-1:exon:6871;Parent=Msa0357080-mRNA-1
chr3_1 exon 37590172 37590286 37590172 ID=Msa0357080-mRNA-1:exon:6872;Parent=Msa0357080-mRNA-1
chr3_1 exon 37591873 37592371 37591873 ID=Msa0357080-mRNA-1:exon:6873;Parent=Msa0357080-mRNA-1
chr3_1 five_prime_UTR 37584330 37584658 37584330 ID=Msa0357080-mRNA-1:five_prime_utr;Parent=Msa0357080-mRNA-1
chr3_1 CDS 37584659 37584753 37584659 ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1
chr3_1 CDS 37584849 37584916 37584849 ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1
chr3_1 CDS 37586327 37586446 37586327 ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1
chr3_1 CDS 37589888 37589961 37589888 ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1
chr3_1 CDS 37590037 37590097 37590037 ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1
chr3_1 CDS 37590172 37590286 37590172 ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1
chr3_1 CDS 37591873 37591993 37591873 ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1
chr3_1 three_prime_UTR 37591994 37592371 37591994 ID=Msa0357080-mRNA-1:three_prime_utr;Parent=Msa0357080-mRNA-1
Gene Sequence

>Msa0357080

ATGAACCAAAGCGTCGTAGAAAGAGAAAACAAAGGATTGCAAAAGGAAGAAGAGGAAATCGTTTGCTTAGATGCATCGTTCTTCATGAATGACGATTACCAGCTTACGGAATTCACATTTGGCTCTCAAAATTTTCAGCTCTTCTGTTTGCAATCTGCTTCCACTGACTTTGATTTGACAGGGCAGCTGGTATGGCCTGGAGCCATGTTGCTGAATGATTATCTATCAAAACATGTTGAGATGTTTCAGGGTTGCACTGCTATTGAATTAGGTTCTGGTGTTGGTATTACCGGAATACTTTGCCACAGATTCTGCAATAAAGTTGTGTTGACAGACCATAATGAAGAAGTGCTTAAGATCATAAAGAAAAATATAGAGCTGCATTCATGTCCTGAGAATATTAGTCCTACTTCTAATGGATTAGTAGCAGAGAAACTAGAATGGGGAAACACTGATCAGATCCATGAAATTTTACAAAAACATCCTGGAGGTTTCGACTTCGTTCTTGGAGCTGATATCTATATCCTTATTATGATGGATTCGATGATTATTTCTGAAGCTTCTAAGTTTCAGATGCAGATGAAGGAAGTGCCTGAAACAAAGTGTATTGTTGGGAATCATGAAGGTGTCATCTATGAGATCACACTCAAGTAA

Protein sequence

>Msa0357080

MNQSVVERENKGLQKEEEEIVCLDASFFMNDDYQLTEFTFGSQNFQLFCLQSASTDFDLTGQLVWPGAMLLNDYLSKHVEMFQGCTAIELGSGVGITGILCHRFCNKVVLTDHNEEVLKIIKKNIELHSCPENISPTSNGLVAEKLEWGNTDQIHEILQKHPGGFDFVLGADIYILIMMDSMIISEASKFQMQMKEVPETKCIVGNHEGVIYEITLK*