Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357080 | XP_024633807.1 | 82.787 | 244 | 8 | 3 | 7 | 217 | 13 | 255 | 8.81e-138 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357080 | sp|Q9BUU2|MET22_HUMAN | 33.333 | 123 | 78 | 2 | 31 | 152 | 153 | 272 | 1.90e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357080 | A0A2Z6M6Y1 | 75.099 | 253 | 27 | 3 | 1 | 217 | 1 | 253 | 6.41e-125 | 363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0357080 | Msa1132890 | 0.800457 | 1.428088e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357080 | MtrunA17_Chr3g0093921 | 89.418 | 189 | 17 | 2 | 7 | 195 | 13 | 198 | 3.64e-122 | 344 |
| Msa0357080 | MtrunA17_Chr3g0093941 | 66.667 | 66 | 22 | 0 | 152 | 217 | 40 | 105 | 6.00e-22 | 86.7 |
| Msa0357080 | MtrunA17_Chr1g0151151 | 29.932 | 147 | 95 | 4 | 30 | 173 | 322 | 463 | 3.93e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357080 | AT2G26810.2 | 55.411 | 231 | 68 | 4 | 20 | 217 | 20 | 248 | 2.30e-83 | 248 |
| Msa0357080 | AT2G26810.1 | 55.411 | 231 | 68 | 4 | 20 | 217 | 20 | 248 | 2.30e-83 | 248 |
| Msa0357080 | AT2G26810.3 | 64.848 | 165 | 56 | 2 | 20 | 184 | 20 | 182 | 9.75e-76 | 227 |
| Msa0357080 | AT2G26810.7 | 64.848 | 165 | 56 | 2 | 20 | 184 | 20 | 182 | 9.75e-76 | 227 |
| Msa0357080 | AT2G26810.4 | 64.848 | 165 | 56 | 2 | 20 | 184 | 20 | 182 | 9.75e-76 | 227 |
| Msa0357080 | AT2G26810.6 | 62.420 | 157 | 58 | 1 | 28 | 184 | 35 | 190 | 1.13e-68 | 209 |
| Msa0357080 | AT2G26810.5 | 62.420 | 157 | 58 | 1 | 28 | 184 | 35 | 190 | 1.13e-68 | 209 |
Find 67 sgRNAs with CRISPR-Local
Find 579 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGACCAATTTGAGAATT+TGG | 0.168755 | 3_1:-37584433 | None:intergenic |
| CCAACAATACACTTTGTTTC+AGG | 0.207273 | 3_1:-37591931 | None:intergenic |
| GGAGGTTTCGACTTCGTTCT+TGG | 0.242993 | 3_1:+37590240 | Msa0357080:CDS |
| GGTTGCACTGCTATTGAATT+AGG | 0.248895 | 3_1:+37586413 | Msa0357080:CDS |
| CCTTAAGCACTTCTTCATTA+TGG | 0.260054 | 3_1:-37589940 | None:intergenic |
| TCATATGCCATGTCTGCTTC+TGG | 0.274775 | 3_1:-37592022 | None:intergenic |
| GGATTATTAAATACATAATA+AGG | 0.291772 | 3_1:-37590278 | None:intergenic |
| TTTGTACCAAATTCTCAAAT+TGG | 0.315744 | 3_1:+37584427 | Msa0357080:five_prime_UTR |
| TTGAGCATTGGCTAGTGTTT+TGG | 0.319306 | 3_1:+37592064 | Msa0357080:three_prime_UTR |
| GTTTGAGTAAATCATCAAAT+TGG | 0.320593 | 3_1:-37584553 | None:intergenic |
| AAAACATGTTGAGATGTTTC+AGG | 0.320727 | 3_1:+37586391 | Msa0357080:CDS |
| AGAAATCCATGGGTTTGATA+TGG | 0.336342 | 3_1:+37592156 | Msa0357080:three_prime_UTR |
| TGCTCAAGTCAAATCAGTTC+TGG | 0.350835 | 3_1:-37592048 | None:intergenic |
| CTTTGAATCACAGGTATTAC+CGG | 0.354880 | 3_1:+37589875 | Msa0357080:intron |
| ATTGTGTTTCTACCTCAAAT+TGG | 0.371107 | 3_1:-37584528 | None:intergenic |
| CAGCTTACGGAATTCACATT+TGG | 0.383218 | 3_1:+37584853 | Msa0357080:CDS |
| AATATTAGTCCTACTTCTAA+TGG | 0.385228 | 3_1:+37590076 | Msa0357080:CDS |
| CATTAAATTAATATAGTTTG+AGG | 0.390009 | 3_1:+37591996 | Msa0357080:three_prime_UTR |
| TCTTGAAAATCTTAAGTAGT+TGG | 0.397330 | 3_1:-37592256 | None:intergenic |
| GAATCTGTGGCAAAGTATTC+CGG | 0.397864 | 3_1:-37589894 | None:intergenic |
| AAAGACAGGGACTAATTTGA+TGG | 0.408105 | 3_1:-37584407 | None:intergenic |
| ATTTGACAGGGCAGCTGGTA+TGG | 0.413020 | 3_1:+37586336 | Msa0357080:CDS |
| TTTCTCTTTCTACGACGCTT+TGG | 0.413908 | 3_1:-37584664 | None:intergenic |
| GACAAATTGATATGAATGAT+TGG | 0.422709 | 3_1:+37592277 | Msa0357080:three_prime_UTR |
| TGAGAATTTGGTACAAAGAC+AGG | 0.425460 | 3_1:-37584421 | None:intergenic |
| TCAGCTGACTTTGATTTGAC+AGG | 0.429318 | 3_1:+37586323 | Msa0357080:intron |
| CTTTGATTTGACAGGGCAGC+TGG | 0.433935 | 3_1:+37586331 | Msa0357080:CDS |
| AGTTATTAGCAGAGTCGGTC+AGG | 0.434450 | 3_1:+37584504 | Msa0357080:five_prime_UTR |
| ACAGGGCAGCTGGTATGGCC+TGG | 0.443321 | 3_1:+37586341 | Msa0357080:CDS |
| AAAGAGACTATGAAAGAAAG+AGG | 0.457957 | 3_1:-37584594 | None:intergenic |
| AATTTGAAGTTACCAGCTTA+CGG | 0.460727 | 3_1:+37584840 | Msa0357080:intron |
| AAACATGTTGAGATGTTTCA+GGG | 0.475930 | 3_1:+37586392 | Msa0357080:CDS |
| CCTGAAACAAAGTGTATTGT+TGG | 0.477583 | 3_1:+37591931 | Msa0357080:CDS |
| AACTGATTTGACTTGAGCAT+TGG | 0.482830 | 3_1:+37592052 | Msa0357080:three_prime_UTR |
| ACTGCTATTGAATTAGGTTC+TGG | 0.483380 | 3_1:+37586419 | Msa0357080:CDS |
| AGTAGCAGAGAAACTAGAAT+GGG | 0.487344 | 3_1:+37590176 | Msa0357080:CDS |
| CCATAATGAAGAAGTGCTTA+AGG | 0.488107 | 3_1:+37589940 | Msa0357080:CDS |
| AGAAAACAAAGGATTGCAAA+AGG | 0.496450 | 3_1:+37584682 | Msa0357080:CDS |
| GAAGTAGGACTAATATTCTC+AGG | 0.508688 | 3_1:-37590070 | None:intergenic |
| TAAGTTTCAGATGCAGATGA+AGG | 0.509468 | 3_1:+37591903 | Msa0357080:CDS |
| TCATTCAGCAACATGGCTCC+AGG | 0.509855 | 3_1:-37586359 | None:intergenic |
| ATTGAATTAGGTTCTGGTGT+TGG | 0.509964 | 3_1:+37586425 | Msa0357080:CDS |
| ATTTCTAACTTCTGTAAACA+AGG | 0.515003 | 3_1:-37584632 | None:intergenic |
| CTGCAATGATTGACAAGGGT+AGG | 0.523374 | 3_1:-37592111 | None:intergenic |
| CAGCTGACTTTGATTTGACA+GGG | 0.526873 | 3_1:+37586324 | Msa0357080:intron |
| ATTTACTCACCATTAGAAGT+AGG | 0.527615 | 3_1:-37590085 | None:intergenic |
| AGAACGAAGTCGAAACCTCC+AGG | 0.535558 | 3_1:-37590237 | None:intergenic |
| AGTCGGTCAGGACCAATTTG+AGG | 0.538782 | 3_1:+37584516 | Msa0357080:five_prime_UTR |
| AAGAGACTATGAAAGAAAGA+GGG | 0.547892 | 3_1:-37584593 | None:intergenic |
| CAAATGTGAATTCCGTAAGC+TGG | 0.548815 | 3_1:-37584852 | None:intergenic |
| AGGATTGCAAAAGGAAGAAG+AGG | 0.555089 | 3_1:+37584691 | Msa0357080:CDS |
| GAGGTTTCCAGAAGCAGACA+TGG | 0.556076 | 3_1:+37592015 | Msa0357080:three_prime_UTR |
| TAGTAGCAGAGAAACTAGAA+TGG | 0.557861 | 3_1:+37590175 | Msa0357080:CDS |
| CAACTTTATTGCAGAATCTG+TGG | 0.563876 | 3_1:-37589907 | None:intergenic |
| CTGAAACAAAGTGTATTGTT+GGG | 0.571235 | 3_1:+37591932 | Msa0357080:CDS |
| AAGATGACTCAAGAAATCCA+TGG | 0.595630 | 3_1:+37592145 | Msa0357080:three_prime_UTR |
| AGATGACTCAAGAAATCCAT+GGG | 0.598039 | 3_1:+37592146 | Msa0357080:three_prime_UTR |
| AATGAAACGACGTGACATGA+AGG | 0.606485 | 3_1:+37584361 | Msa0357080:five_prime_UTR |
| GAGAATTTGGTACAAAGACA+GGG | 0.608933 | 3_1:-37584420 | None:intergenic |
| TGTATTGTTGGGAATCATGA+AGG | 0.613190 | 3_1:+37591943 | Msa0357080:CDS |
| TTTCTAACTTCTGTAAACAA+GGG | 0.615345 | 3_1:-37584631 | None:intergenic |
| TGCAATGATTGACAAGGGTA+GGG | 0.621777 | 3_1:-37592110 | None:intergenic |
| TAGATAATCATTCAGCAACA+TGG | 0.625311 | 3_1:-37586366 | None:intergenic |
| GTTGTCTGCAATGATTGACA+AGG | 0.677902 | 3_1:-37592116 | None:intergenic |
| GTCGTAGAAAGAGAAAACAA+AGG | 0.692171 | 3_1:+37584671 | Msa0357080:CDS |
| GTAGCAGAGAAACTAGAATG+GGG | 0.707858 | 3_1:+37590177 | Msa0357080:CDS |
| TTGTCTGCAATGATTGACAA+GGG | 0.756598 | 3_1:-37592115 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | - | chr3_1:37588125-37588144 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr3_1:37588126-37588145 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr3_1:37588126-37588145 | Msa0357080:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr3_1:37588125-37588144 | Msa0357080:intron | 0.0% |
| !!! | GATAGTATTTTATTTTTATT+TGG | - | chr3_1:37585170-37585189 | None:intergenic | 10.0% |
| !!! | TTTATATTGGTTTTAAATAA+TGG | + | chr3_1:37585738-37585757 | Msa0357080:intron | 10.0% |
| !!! | TTTTTTATTTAGAACTTTAA+TGG | + | chr3_1:37587499-37587518 | Msa0357080:intron | 10.0% |
| !!! | TTTTTTTTTTTTATTGATCA+GGG | - | chr3_1:37587701-37587720 | None:intergenic | 10.0% |
| !!! | GTTAAGATTTTTTATAAAAA+TGG | + | chr3_1:37588764-37588783 | Msa0357080:intron | 10.0% |
| !!! | TTGTTGATATTAATTTTATT+TGG | - | chr3_1:37591019-37591038 | None:intergenic | 10.0% |
| !!! | TTCTTTTGAATTACATTATT+GGG | - | chr3_1:37586674-37586693 | None:intergenic | 15.0% |
| !!! | ATTCTTTTGAATTACATTAT+TGG | - | chr3_1:37586675-37586694 | None:intergenic | 15.0% |
| !!! | CTAGTTTTCATTTAAAAAAT+AGG | + | chr3_1:37587364-37587383 | Msa0357080:intron | 15.0% |
| !!! | CTTTTTTTTTTTTATTGATC+AGG | - | chr3_1:37587702-37587721 | None:intergenic | 15.0% |
| !!! | TTTTTTTATTTTAGAAGTTG+TGG | - | chr3_1:37588520-37588539 | None:intergenic | 15.0% |
| !! | TAAATCTATTATTTGAGAAA+TGG | - | chr3_1:37589169-37589188 | None:intergenic | 15.0% |
| !!! | AATTTTGTTATTTACTTCTA+CGG | - | chr3_1:37589208-37589227 | None:intergenic | 15.0% |
| !!! | AAATAAATTGAAGATTTTCA+AGG | - | chr3_1:37589407-37589426 | None:intergenic | 15.0% |
| !! | TATTTAAATCAAAATTCAGA+GGG | - | chr3_1:37590143-37590162 | None:intergenic | 15.0% |
| !! | ATATTTAAATCAAAATTCAG+AGG | - | chr3_1:37590144-37590163 | None:intergenic | 15.0% |
| !!! | TTTGATTTAAATATATATGC+AGG | + | chr3_1:37590150-37590169 | Msa0357080:intron | 15.0% |
| !! | GGATTATTAAATACATAATA+AGG | - | chr3_1:37590281-37590300 | None:intergenic | 15.0% |
| !! | TTGAAATATTGATATATTGA+GGG | - | chr3_1:37590462-37590481 | None:intergenic | 15.0% |
| !!! | TTTGAAATATTGATATATTG+AGG | - | chr3_1:37590463-37590482 | None:intergenic | 15.0% |
| !! | ACAATAAATAAGTACTTATA+AGG | - | chr3_1:37590591-37590610 | None:intergenic | 15.0% |
| !! | CATTAAATTAATATAGTTTG+AGG | + | chr3_1:37591996-37592015 | Msa0357080:three_prime_UTR | 15.0% |
| !! | GAAATGTAAAAAAAACTTAC+TGG | - | chr3_1:37584917-37584936 | None:intergenic | 20.0% |
| !!! | GACAAAAAATGACTATTTTA+GGG | - | chr3_1:37585456-37585475 | None:intergenic | 20.0% |
| !!! | AGACAAAAAATGACTATTTT+AGG | - | chr3_1:37585457-37585476 | None:intergenic | 20.0% |
| !! | ATAAGAAGAATTAACAAGAT+AGG | - | chr3_1:37585562-37585581 | None:intergenic | 20.0% |
| !! | ATCTTGTTAATTCTTCTTAT+TGG | + | chr3_1:37585562-37585581 | Msa0357080:intron | 20.0% |
| !! | CAATATAAAGCAAATAATGT+TGG | - | chr3_1:37585727-37585746 | None:intergenic | 20.0% |
| !! | CAACATTATTTGCTTTATAT+TGG | + | chr3_1:37585725-37585744 | Msa0357080:intron | 20.0% |
| !!! | TTTTTGCTTTTTTATGTGTA+TGG | + | chr3_1:37585821-37585840 | Msa0357080:intron | 20.0% |
| !!! | TTTTGCTTTTTTATGTGTAT+GGG | + | chr3_1:37585822-37585841 | Msa0357080:intron | 20.0% |
| !! | ATATAATAACATACAAGACA+GGG | + | chr3_1:37586022-37586041 | Msa0357080:intron | 20.0% |
| !!! | ATTTTCTGTGTTTTTATAAC+TGG | + | chr3_1:37586233-37586252 | Msa0357080:intron | 20.0% |
| !!! | CTGTATCTTATAGTTTTTTT+TGG | + | chr3_1:37586275-37586294 | Msa0357080:intron | 20.0% |
| !!! | GTTTATACTTTTTATGTTTG+TGG | + | chr3_1:37586485-37586504 | Msa0357080:intron | 20.0% |
| !! | ACATATTATGATTACATGAT+AGG | - | chr3_1:37586645-37586664 | None:intergenic | 20.0% |
| !! | TCATGTAATCATAATATGTT+AGG | + | chr3_1:37586646-37586665 | Msa0357080:intron | 20.0% |
| !! | TTGAGAAAATAAGAAAGAAT+AGG | + | chr3_1:37586714-37586733 | Msa0357080:intron | 20.0% |
| !! | TGAGAAAATAAGAAAGAATA+GGG | + | chr3_1:37586715-37586734 | Msa0357080:intron | 20.0% |
| !!! | AAATGGATTTTGTTTAGAAA+TGG | + | chr3_1:37587184-37587203 | Msa0357080:intron | 20.0% |
| !!! | AACCAATTTTTTATGTAATC+TGG | + | chr3_1:37587212-37587231 | Msa0357080:intron | 20.0% |
| !! | AACCAGATTACATAAAAAAT+TGG | - | chr3_1:37587217-37587236 | None:intergenic | 20.0% |
| !! | AAAAAACTGATATTGAAAAC+CGG | - | chr3_1:37587264-37587283 | None:intergenic | 20.0% |
| !! | CTATTAACCAGTTTAATTAA+CGG | + | chr3_1:37587288-37587307 | Msa0357080:intron | 20.0% |
| !! | CTAAAAACTAATATTACATG+TGG | + | chr3_1:37587550-37587569 | Msa0357080:intron | 20.0% |
| !!! | TTACTGATTTGTATACATTT+CGG | - | chr3_1:37587738-37587757 | None:intergenic | 20.0% |
| !! | AAATGTATACAAATCAGTAA+GGG | + | chr3_1:37587738-37587757 | Msa0357080:intron | 20.0% |
| !! | TAAGTTAAATAGAGTCTAAT+TGG | + | chr3_1:37587890-37587909 | Msa0357080:intron | 20.0% |
| !! | ATGTCATGAACAAAATATAT+TGG | + | chr3_1:37587929-37587948 | Msa0357080:intron | 20.0% |
| !! | TGTCATGAACAAAATATATT+GGG | + | chr3_1:37587930-37587949 | Msa0357080:intron | 20.0% |
| !!! | TTTTTTTTTGGAATAATGTG+TGG | - | chr3_1:37588292-37588311 | None:intergenic | 20.0% |
| !!! | TGCGTGATTTTTTTTTTTTT+TGG | - | chr3_1:37588304-37588323 | None:intergenic | 20.0% |
| !! | TAAATCGTGGATAAAAAAAT+TGG | + | chr3_1:37588590-37588609 | Msa0357080:intron | 20.0% |
| !! | ATAAAAATGGTCAAAGAAAA+TGG | + | chr3_1:37588777-37588796 | Msa0357080:intron | 20.0% |
| !! | TAAAAATGGTCAAAGAAAAT+GGG | + | chr3_1:37588778-37588797 | Msa0357080:intron | 20.0% |
| !!! | TGTGTTTTTTTGTTTTTGTT+TGG | + | chr3_1:37588922-37588941 | Msa0357080:intron | 20.0% |
| !! | TAAGGAAAACCTATATATAT+GGG | - | chr3_1:37589079-37589098 | None:intergenic | 20.0% |
| !!! | TACAAAACAATTAGTTCTTT+TGG | - | chr3_1:37589541-37589560 | None:intergenic | 20.0% |
| !!! | GTGGTATAATATTGTATTTT+TGG | + | chr3_1:37589710-37589729 | Msa0357080:intron | 20.0% |
| !!! | GATGTTTTTGTAAAATTTCA+TGG | - | chr3_1:37590218-37590237 | None:intergenic | 20.0% |
| !! | TTGTAATGTTAGATATCAAT+GGG | - | chr3_1:37590302-37590321 | None:intergenic | 20.0% |
| !! | TATGACAATAAGTATATTGA+AGG | - | chr3_1:37590563-37590582 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTGATACATTGA+AGG | + | chr3_1:37590711-37590730 | Msa0357080:intron | 20.0% |
| !!! | AGTTCATTTTAGCAAATAAT+TGG | - | chr3_1:37590890-37590909 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTTATCTCTTCT+TGG | + | chr3_1:37591195-37591214 | Msa0357080:intron | 20.0% |
| !!! | CTGTAGTTCATTATATTTTT+GGG | + | chr3_1:37591449-37591468 | Msa0357080:intron | 20.0% |
| !! | AACGAAAAATGATTCATATA+TGG | + | chr3_1:37591514-37591533 | Msa0357080:intron | 20.0% |
| !!! | AAAAATACATTTTGCAAGAT+AGG | - | chr3_1:37592214-37592233 | None:intergenic | 20.0% |
| !!! | AATGTATTTTTCATTGTGTA+AGG | + | chr3_1:37592223-37592242 | Msa0357080:three_prime_UTR | 20.0% |
| ! | TTTGTACCAAATTCTCAAAT+TGG | + | chr3_1:37584427-37584446 | Msa0357080:five_prime_UTR | 25.0% |
| ! | GTTTGAGTAAATCATCAAAT+TGG | - | chr3_1:37584556-37584575 | None:intergenic | 25.0% |
| ! | TTTCTAACTTCTGTAAACAA+GGG | - | chr3_1:37584634-37584653 | None:intergenic | 25.0% |
| ! | ATTTCTAACTTCTGTAAACA+AGG | - | chr3_1:37584635-37584654 | None:intergenic | 25.0% |
| ! | ATAGCTTAAGAAAAGTAACT+GGG | - | chr3_1:37585192-37585211 | None:intergenic | 25.0% |
| ! | AATAGCTTAAGAAAAGTAAC+TGG | - | chr3_1:37585193-37585212 | None:intergenic | 25.0% |
| ! | TGAACATTTACCCTAAATTT+CGG | + | chr3_1:37585514-37585533 | Msa0357080:intron | 25.0% |
| !!! | CCAAGTAAATTTTATTTCCT+TGG | - | chr3_1:37585977-37585996 | None:intergenic | 25.0% |
| ! | CCAAGGAAATAAAATTTACT+TGG | + | chr3_1:37585974-37585993 | Msa0357080:intron | 25.0% |
| ! | GTCTTGTATGTTATTATATC+AGG | - | chr3_1:37586021-37586040 | None:intergenic | 25.0% |
| ! | GATATAATAACATACAAGAC+AGG | + | chr3_1:37586021-37586040 | Msa0357080:intron | 25.0% |
| ! | TTCATAACTGCAAATCAATT+GGG | - | chr3_1:37586056-37586075 | None:intergenic | 25.0% |
| ! | ATTCATAACTGCAAATCAAT+TGG | - | chr3_1:37586057-37586076 | None:intergenic | 25.0% |
| ! | AAGTTTATATAAAAGCTTCC+AGG | - | chr3_1:37586202-37586221 | None:intergenic | 25.0% |
| ! | ATACAGAAAGCAAAAAATCA+AGG | - | chr3_1:37586261-37586280 | None:intergenic | 25.0% |
| !!! | TCCTAGTTTTACAGATAAAA+AGG | + | chr3_1:37586533-37586552 | Msa0357080:intron | 25.0% |
| !!! | CCTAGTTTTACAGATAAAAA+GGG | + | chr3_1:37586534-37586553 | Msa0357080:intron | 25.0% |
| !!! | CTAGTTTTACAGATAAAAAG+GGG | + | chr3_1:37586535-37586554 | Msa0357080:intron | 25.0% |
| !!! | TAGTTTTACAGATAAAAAGG+GGG | + | chr3_1:37586536-37586555 | Msa0357080:intron | 25.0% |
| ! | GTAACTAAATTCCTAAAACA+AGG | - | chr3_1:37586597-37586616 | None:intergenic | 25.0% |
| ! | TAATGACTCTATTGAAAAAG+GGG | - | chr3_1:37586766-37586785 | None:intergenic | 25.0% |
| ! | GTAATGACTCTATTGAAAAA+GGG | - | chr3_1:37586767-37586786 | None:intergenic | 25.0% |
| ! | AGTAATGACTCTATTGAAAA+AGG | - | chr3_1:37586768-37586787 | None:intergenic | 25.0% |
| ! | TATAGGATTAGGAGTTAATT+GGG | - | chr3_1:37586878-37586897 | None:intergenic | 25.0% |
| ! | ATATAGGATTAGGAGTTAAT+TGG | - | chr3_1:37586879-37586898 | None:intergenic | 25.0% |
| ! | GATAGTAACAATATAGGATT+AGG | - | chr3_1:37586889-37586908 | None:intergenic | 25.0% |
| ! | AGAAGAGATAGTAACAATAT+AGG | - | chr3_1:37586895-37586914 | None:intergenic | 25.0% |
| ! | TTGTTAGGATTTGAATTGTT+TGG | - | chr3_1:37586928-37586947 | None:intergenic | 25.0% |
| !!! | TAAACAGGTTTGTTTCATTT+TGG | - | chr3_1:37587064-37587083 | None:intergenic | 25.0% |
| ! | AAATGAAACAAACCTGTTTA+TGG | + | chr3_1:37587064-37587083 | Msa0357080:intron | 25.0% |
| !!! | TGTAATCTGGTTTTCAAAAA+TGG | + | chr3_1:37587225-37587244 | Msa0357080:intron | 25.0% |
| ! | TTGAAACTGGTTATTTAAAC+TGG | - | chr3_1:37587327-37587346 | None:intergenic | 25.0% |
| !! | CATAAAAGTAGTATTGAAAC+TGG | - | chr3_1:37587340-37587359 | None:intergenic | 25.0% |
| !!! | TATCTAAACCAGTTTTAAAC+TGG | + | chr3_1:37587392-37587411 | Msa0357080:intron | 25.0% |
| ! | ATCATTTGTACAAAACAGAA+GGG | - | chr3_1:37587457-37587476 | None:intergenic | 25.0% |
| ! | AATCATTTGTACAAAACAGA+AGG | - | chr3_1:37587458-37587477 | None:intergenic | 25.0% |
| !!! | TACTGATTTGTATACATTTC+GGG | - | chr3_1:37587737-37587756 | None:intergenic | 25.0% |
| ! | GAAATGTATACAAATCAGTA+AGG | + | chr3_1:37587737-37587756 | Msa0357080:intron | 25.0% |
| ! | ATTTGTGATTTATGGTAACA+AGG | - | chr3_1:37587793-37587812 | None:intergenic | 25.0% |
| !!! | AGTTTTCGATTTGTGATTTA+TGG | - | chr3_1:37587801-37587820 | None:intergenic | 25.0% |
| ! | TTAACTCCTCAGAAAAATTA+AGG | - | chr3_1:37587825-37587844 | None:intergenic | 25.0% |
| ! | GTCATGAACAAAATATATTG+GGG | + | chr3_1:37587931-37587950 | Msa0357080:intron | 25.0% |
| ! | AAAAAAAAAATCACGCAAAC+TGG | + | chr3_1:37588307-37588326 | Msa0357080:intron | 25.0% |
| !! | AAACCACAACTTCTAAAAAA+AGG | + | chr3_1:37588402-37588421 | Msa0357080:intron | 25.0% |
| !! | AACCACAACTTCTAAAAAAA+GGG | + | chr3_1:37588403-37588422 | Msa0357080:intron | 25.0% |
| !!! | GTTTTAGATTATGATGCAAA+CGG | + | chr3_1:37588616-37588635 | Msa0357080:intron | 25.0% |
| ! | TTGGATAAAAATACACAGAT+CGG | - | chr3_1:37588997-37589016 | None:intergenic | 25.0% |
| !!! | ATCTGTGTATTTTTATCCAA+TGG | + | chr3_1:37588997-37589016 | Msa0357080:intron | 25.0% |
| ! | GTAAGGAAAACCTATATATA+TGG | - | chr3_1:37589080-37589099 | None:intergenic | 25.0% |
| ! | TACAAAACATGAAATCTTGT+AGG | + | chr3_1:37589295-37589314 | Msa0357080:intron | 25.0% |
| !! | TTCTTTTGACACAAAACATT+GGG | - | chr3_1:37589441-37589460 | None:intergenic | 25.0% |
| !! | TTTCTTTTGACACAAAACAT+TGG | - | chr3_1:37589442-37589461 | None:intergenic | 25.0% |
| !! | TTTTGGTCTCTAAGTTATAT+TGG | - | chr3_1:37589524-37589543 | None:intergenic | 25.0% |
| !!! | AAGAACTAATTGTTTTGTAC+TGG | + | chr3_1:37589542-37589561 | Msa0357080:intron | 25.0% |
| ! | AATATTAGTCCTACTTCTAA+TGG | + | chr3_1:37590076-37590095 | Msa0357080:CDS | 25.0% |
| !! | GAAATTTTACAAAAACATCC+TGG | + | chr3_1:37590219-37590238 | Msa0357080:CDS | 25.0% |
| ! | GTTGTAATGTTAGATATCAA+TGG | - | chr3_1:37590303-37590322 | None:intergenic | 25.0% |
| !! | TTAAATGCCTAAAAGTATGA+TGG | + | chr3_1:37590328-37590347 | Msa0357080:intron | 25.0% |
| !!! | ATTTTAGTCCCTATATGAAA+AGG | + | chr3_1:37590612-37590631 | Msa0357080:intron | 25.0% |
| !! | TTTTAGTCCCTATATGAAAA+GGG | + | chr3_1:37590613-37590632 | Msa0357080:intron | 25.0% |
| !! | ACAATAACCCTTTTCATATA+GGG | - | chr3_1:37590623-37590642 | None:intergenic | 25.0% |
| !!! | GATTTATAAAACTTGTTGCA+AGG | - | chr3_1:37591365-37591384 | None:intergenic | 25.0% |
| !! | TGCAATGAAGAACTTAATTT+TGG | - | chr3_1:37591428-37591447 | None:intergenic | 25.0% |
| !! | GCTGTAGTTCATTATATTTT+TGG | + | chr3_1:37591448-37591467 | Msa0357080:intron | 25.0% |
| !!! | TTCATTATATTTTTGGGACT+TGG | + | chr3_1:37591455-37591474 | Msa0357080:intron | 25.0% |
| !!! | CACTTATTTTTTCATGAGAT+TGG | + | chr3_1:37591661-37591680 | Msa0357080:intron | 25.0% |
| ! | TCTTGAAAATCTTAAGTAGT+TGG | - | chr3_1:37592259-37592278 | None:intergenic | 25.0% |
| ! | GACAAATTGATATGAATGAT+TGG | + | chr3_1:37592277-37592296 | Msa0357080:three_prime_UTR | 25.0% |
| !!! | TTTTGAGTTATTAGCAGAGT+CGG | + | chr3_1:37584499-37584518 | Msa0357080:five_prime_UTR | 30.0% |
| ! | ATTGTGTTTCTACCTCAAAT+TGG | - | chr3_1:37584531-37584550 | None:intergenic | 30.0% |
| AAGAGACTATGAAAGAAAGA+GGG | - | chr3_1:37584596-37584615 | None:intergenic | 30.0% | |
| AAAGAGACTATGAAAGAAAG+AGG | - | chr3_1:37584597-37584616 | None:intergenic | 30.0% | |
| AGAAAACAAAGGATTGCAAA+AGG | + | chr3_1:37584682-37584701 | Msa0357080:CDS | 30.0% | |
| ! | CTGTAATGATTGATCTTTTC+TGG | + | chr3_1:37584812-37584831 | Msa0357080:intron | 30.0% |
| ! | AATTTGAAGTTACCAGCTTA+CGG | + | chr3_1:37584840-37584859 | Msa0357080:intron | 30.0% |
| ! | CTTTTCGTATATCGAAACTT+AGG | - | chr3_1:37584969-37584988 | None:intergenic | 30.0% |
| GTAGAAGAACAATTATTGGT+CGG | + | chr3_1:37585096-37585115 | Msa0357080:intron | 30.0% | |
| TGTATATCCAATCACTTCAA+AGG | - | chr3_1:37585216-37585235 | None:intergenic | 30.0% | |
| ! | TTGTAATAGTGTCACTATGA+CGG | - | chr3_1:37585401-37585420 | None:intergenic | 30.0% |
| AAGAATTAACAAGATAGGAG+GGG | - | chr3_1:37585557-37585576 | None:intergenic | 30.0% | |
| GAAGAATTAACAAGATAGGA+GGG | - | chr3_1:37585558-37585577 | None:intergenic | 30.0% | |
| AGAAGAATTAACAAGATAGG+AGG | - | chr3_1:37585559-37585578 | None:intergenic | 30.0% | |
| AAATATAAGTGATTCCTCCA+AGG | - | chr3_1:37585658-37585677 | None:intergenic | 30.0% | |
| !!! | GATAAGCTATTTTGAAACCA+TGG | + | chr3_1:37585692-37585711 | Msa0357080:intron | 30.0% |
| !!! | CTTTTTTATGTGTATGGGTA+TGG | + | chr3_1:37585827-37585846 | Msa0357080:intron | 30.0% |
| TTGCTTAGACATTACTATTG+CGG | - | chr3_1:37585913-37585932 | None:intergenic | 30.0% | |
| TAGTAATGTCTAAGCAAATG+AGG | + | chr3_1:37585916-37585935 | Msa0357080:intron | 30.0% | |
| AGTAATGTCTAAGCAAATGA+GGG | + | chr3_1:37585917-37585936 | Msa0357080:intron | 30.0% | |
| !!! | CATAGTGAACAGTTTTAGTT+TGG | - | chr3_1:37585949-37585968 | None:intergenic | 30.0% |
| TAGATAATCATTCAGCAACA+TGG | - | chr3_1:37586369-37586388 | None:intergenic | 30.0% | |
| AAAACATGTTGAGATGTTTC+AGG | + | chr3_1:37586391-37586410 | Msa0357080:CDS | 30.0% | |
| AAACATGTTGAGATGTTTCA+GGG | + | chr3_1:37586392-37586411 | Msa0357080:CDS | 30.0% | |
| !!! | GTAAAACTAGGAGCATTTTA+AGG | - | chr3_1:37586525-37586544 | None:intergenic | 30.0% |
| ! | CCCTTTTTATCTGTAAAACT+AGG | - | chr3_1:37586537-37586556 | None:intergenic | 30.0% |
| ! | AGTTTTACAGATAAAAAGGG+GGG | + | chr3_1:37586537-37586556 | Msa0357080:intron | 30.0% |
| !!! | GCACAATATTACCTTGTTTT+AGG | + | chr3_1:37586583-37586602 | Msa0357080:intron | 30.0% |
| ! | CTTATCTTCCAAAGTATTAC+TGG | + | chr3_1:37586616-37586635 | Msa0357080:intron | 30.0% |
| ATAGGTTTCCAGTAATACTT+TGG | - | chr3_1:37586627-37586646 | None:intergenic | 30.0% | |
| AATGACTCTATTGAAAAAGG+GGG | - | chr3_1:37586765-37586784 | None:intergenic | 30.0% | |
| ATAGGATTAGGAGTTAATTG+GGG | - | chr3_1:37586877-37586896 | None:intergenic | 30.0% | |
| GGATTTGAATTGTTTGGATT+TGG | - | chr3_1:37586922-37586941 | None:intergenic | 30.0% | |
| TGTGTGATTATGTTAGGATA+AGG | - | chr3_1:37586957-37586976 | None:intergenic | 30.0% | |
| ! | GTTTAAAACGAGTCTGAAAA+TGG | + | chr3_1:37587167-37587186 | Msa0357080:intron | 30.0% |
| AAATGGTTTATGCTTCAATC+CGG | + | chr3_1:37587242-37587261 | Msa0357080:intron | 30.0% | |
| TCATTTGTACAAAACAGAAG+GGG | - | chr3_1:37587456-37587475 | None:intergenic | 30.0% | |
| TAATATTACATGTGGCATGT+TGG | + | chr3_1:37587558-37587577 | Msa0357080:intron | 30.0% | |
| TAAATATGTGCTACGTCATT+TGG | - | chr3_1:37587601-37587620 | None:intergenic | 30.0% | |
| TGACGTAGCACATATTTATA+AGG | + | chr3_1:37587603-37587622 | Msa0357080:intron | 30.0% | |
| !! | GGTTGTTATTTCTGAAAATG+TGG | - | chr3_1:37587630-37587649 | None:intergenic | 30.0% |
| ! | AAACTGCCTTAATTTTTCTG+AGG | + | chr3_1:37587816-37587835 | Msa0357080:intron | 30.0% |
| GACATATCAATATCAACCAT+CGG | + | chr3_1:37588212-37588231 | Msa0357080:intron | 30.0% | |
| AACCATCGGATATAAATACA+CGG | + | chr3_1:37588226-37588245 | Msa0357080:intron | 30.0% | |
| TTAGAAGTTGTGGTTTCAAA+CGG | - | chr3_1:37588398-37588417 | None:intergenic | 30.0% | |
| ! | TCAATTCGTAGGTTGAAAAT+TGG | + | chr3_1:37588566-37588585 | Msa0357080:intron | 30.0% |
| ! | CAATTCGTAGGTTGAAAATT+GGG | + | chr3_1:37588567-37588586 | Msa0357080:intron | 30.0% |
| AAGAGAAACCAATACAAAAG+AGG | + | chr3_1:37588802-37588821 | Msa0357080:intron | 30.0% | |
| ! | CCTTTATTCCTCTTTTGTAT+TGG | - | chr3_1:37588813-37588832 | None:intergenic | 30.0% |
| CCAATACAAAAGAGGAATAA+AGG | + | chr3_1:37588810-37588829 | Msa0357080:intron | 30.0% | |
| ATACAAAAGAGGAATAAAGG+AGG | + | chr3_1:37588813-37588832 | Msa0357080:intron | 30.0% | |
| TTATCTAGATGTGAAGAACA+AGG | + | chr3_1:37588852-37588871 | Msa0357080:intron | 30.0% | |
| ! | TTTGTTTGGAATAATGTGTG+TGG | + | chr3_1:37588936-37588955 | Msa0357080:intron | 30.0% |
| AGATATGCTCCCATATATAT+AGG | + | chr3_1:37589067-37589086 | Msa0357080:intron | 30.0% | |
| GTGTCTGAATTCAAAGAAAT+TGG | + | chr3_1:37589342-37589361 | Msa0357080:intron | 30.0% | |
| TTCAAAGAAATTGGACAGTT+TGG | + | chr3_1:37589351-37589370 | Msa0357080:intron | 30.0% | |
| TCTATGCATTTGATAAGGAA+GGG | - | chr3_1:37589484-37589503 | None:intergenic | 30.0% | |
| !! | ACTAATTGTTTTGTACTGGT+TGG | + | chr3_1:37589546-37589565 | Msa0357080:intron | 30.0% |
| TACTGTTCTATACACTTGAT+CGG | + | chr3_1:37589576-37589595 | Msa0357080:intron | 30.0% | |
| GCAAACTATAAACAGAAAAC+TGG | - | chr3_1:37589663-37589682 | None:intergenic | 30.0% | |
| ATTGAGATCTTACCTAAGAT+AGG | - | chr3_1:37589789-37589808 | None:intergenic | 30.0% | |
| GTCTAATGTCATACAGAATA+AGG | - | chr3_1:37589832-37589851 | None:intergenic | 30.0% | |
| ! | TATTTCTTGCTTTGAATCAC+AGG | + | chr3_1:37589866-37589885 | Msa0357080:intron | 30.0% |
| TTAGACCACATAGAATAATC+AGG | - | chr3_1:37589998-37590017 | None:intergenic | 30.0% | |
| ! | TTTCTTTATGATCTGAGATG+AGG | - | chr3_1:37590029-37590048 | None:intergenic | 30.0% |
| ATTTACTCACCATTAGAAGT+AGG | - | chr3_1:37590088-37590107 | None:intergenic | 30.0% | |
| GTAAATACCTAGATGATCAA+TGG | + | chr3_1:37590102-37590121 | Msa0357080:intron | 30.0% | |
| ! | ATTTTACAAAAACATCCTGG+AGG | + | chr3_1:37590222-37590241 | Msa0357080:CDS | 30.0% |
| TACATAGATACTGATAAAGC+TGG | + | chr3_1:37590368-37590387 | Msa0357080:intron | 30.0% | |
| TGGTTCTTCATATAGATCTT+TGG | + | chr3_1:37590388-37590407 | Msa0357080:intron | 30.0% | |
| GGTTCTTCATATAGATCTTT+GGG | + | chr3_1:37590389-37590408 | Msa0357080:intron | 30.0% | |
| GTTCTTCATATAGATCTTTG+GGG | + | chr3_1:37590390-37590409 | Msa0357080:intron | 30.0% | |
| ! | CACAATAACCCTTTTCATAT+AGG | - | chr3_1:37590624-37590643 | None:intergenic | 30.0% |
| ! | ATAACCTTCTAAAGATCTAC+GGG | - | chr3_1:37590785-37590804 | None:intergenic | 30.0% |
| ! | GATAACCTTCTAAAGATCTA+CGG | - | chr3_1:37590786-37590805 | None:intergenic | 30.0% |
| !! | ACTAGCAAAGGCTTTAAAAT+AGG | - | chr3_1:37590842-37590861 | None:intergenic | 30.0% |
| CATTATCATCTCATAGTTGA+TGG | + | chr3_1:37591254-37591273 | Msa0357080:intron | 30.0% | |
| AGATAGCAATAGATAGTAGT+GGG | + | chr3_1:37591301-37591320 | Msa0357080:intron | 30.0% | |
| !! | GTTTCCAAATCATTTTAGTG+TGG | + | chr3_1:37591401-37591420 | Msa0357080:intron | 30.0% |
| CTGATTAAATAATACTCCTC+TGG | + | chr3_1:37591480-37591499 | Msa0357080:intron | 30.0% | |
| !! | ATTTTTGAAAGTGCACTTCA+TGG | - | chr3_1:37591640-37591659 | None:intergenic | 30.0% |
| AGTTGTAGGATTGAGTAATT+TGG | - | chr3_1:37591767-37591786 | None:intergenic | 30.0% | |
| TTACTCAATCCTACAACTTT+AGG | + | chr3_1:37591769-37591788 | Msa0357080:intron | 30.0% | |
| CTGAAACAAAGTGTATTGTT+GGG | + | chr3_1:37591932-37591951 | Msa0357080:CDS | 30.0% | |
| TCAATCAATCCAAAAACAGT+TGG | - | chr3_1:37592313-37592332 | None:intergenic | 30.0% | |
| AAAGACAGGGACTAATTTGA+TGG | - | chr3_1:37584410-37584429 | None:intergenic | 35.0% | |
| GAGAATTTGGTACAAAGACA+GGG | - | chr3_1:37584423-37584442 | None:intergenic | 35.0% | |
| TGAGAATTTGGTACAAAGAC+AGG | - | chr3_1:37584424-37584443 | None:intergenic | 35.0% | |
| CAGAGACCAATTTGAGAATT+TGG | - | chr3_1:37584436-37584455 | None:intergenic | 35.0% | |
| GTCGTAGAAAGAGAAAACAA+AGG | + | chr3_1:37584671-37584690 | Msa0357080:CDS | 35.0% | |
| CAGTGACAGTGAAAAGAAAA+AGG | - | chr3_1:37584786-37584805 | None:intergenic | 35.0% | |
| TCCTAGCTAAGCAAATTGTT+TGG | + | chr3_1:37585004-37585023 | Msa0357080:intron | 35.0% | |
| ! | TCCAAACAATTTGCTTAGCT+AGG | - | chr3_1:37585008-37585027 | None:intergenic | 35.0% |
| GGAATTAAACTCAAGTTCTC+CGG | - | chr3_1:37585073-37585092 | None:intergenic | 35.0% | |
| GAGAACTTGAGTTTAATTCC+CGG | + | chr3_1:37585073-37585092 | Msa0357080:intron | 35.0% | |
| AGAACTTGAGTTTAATTCCC+GGG | + | chr3_1:37585074-37585093 | Msa0357080:intron | 35.0% | |
| CAATAATTGTTCTTCTACCC+GGG | - | chr3_1:37585094-37585113 | None:intergenic | 35.0% | |
| CCAATAATTGTTCTTCTACC+CGG | - | chr3_1:37585095-37585114 | None:intergenic | 35.0% | |
| ! | TTTATTTGGTGATAACCCTC+TGG | - | chr3_1:37585156-37585175 | None:intergenic | 35.0% |
| !! | AGCTATTCCTTTGAAGTGAT+TGG | + | chr3_1:37585206-37585225 | Msa0357080:intron | 35.0% |
| ATCTTAGCTAAGCAAGTGAT+TGG | + | chr3_1:37585255-37585274 | Msa0357080:intron | 35.0% | |
| AAGTGATTGGACGAATCATT+CGG | + | chr3_1:37585268-37585287 | Msa0357080:intron | 35.0% | |
| CTTTAAACACCATTGCATTG+CGG | + | chr3_1:37585363-37585382 | Msa0357080:intron | 35.0% | |
| TGTCTTCAACTTATTGCTAC+TGG | + | chr3_1:37585472-37585491 | Msa0357080:intron | 35.0% | |
| CGTTGTCATTCCGAAATTTA+GGG | - | chr3_1:37585527-37585546 | None:intergenic | 35.0% | |
| TCGTTGTCATTCCGAAATTT+AGG | - | chr3_1:37585528-37585547 | None:intergenic | 35.0% | |
| !!! | CTATTTTGAAACCATGGAGT+TGG | + | chr3_1:37585698-37585717 | Msa0357080:intron | 35.0% |
| ! | CTGTTCACTATGTTTTACCA+AGG | + | chr3_1:37585957-37585976 | Msa0357080:intron | 35.0% |
| ATCAGGAAAACCTTTCAAAG+AGG | - | chr3_1:37586004-37586023 | None:intergenic | 35.0% | |
| TAATAACATACAAGACAGGG+TGG | + | chr3_1:37586025-37586044 | Msa0357080:intron | 35.0% | |
| AACTGCAAATCAATTGGGAT+TGG | - | chr3_1:37586051-37586070 | None:intergenic | 35.0% | |
| CCTAAGAATGACAGTGTAAA+GGG | - | chr3_1:37586135-37586154 | None:intergenic | 35.0% | |
| CCTTTACACTGTCATTCTTA+GGG | + | chr3_1:37586133-37586152 | Msa0357080:intron | 35.0% | |
| CTTTACACTGTCATTCTTAG+GGG | + | chr3_1:37586134-37586153 | Msa0357080:intron | 35.0% | |
| GTCATTCTTAGGGGATAAAT+TGG | + | chr3_1:37586143-37586162 | Msa0357080:intron | 35.0% | |
| GAAATGCATAATTGAGAACC+TGG | + | chr3_1:37586181-37586200 | Msa0357080:intron | 35.0% | |
| ACTGCTATTGAATTAGGTTC+TGG | + | chr3_1:37586419-37586438 | Msa0357080:CDS | 35.0% | |
| ! | ATTGAATTAGGTTCTGGTGT+TGG | + | chr3_1:37586425-37586444 | Msa0357080:CDS | 35.0% |
| ! | ATAGAAGAACGCATTGATAG+AGG | - | chr3_1:37586827-37586846 | None:intergenic | 35.0% |
| GTGATTATGTTAGGATAAGG+AGG | - | chr3_1:37586954-37586973 | None:intergenic | 35.0% | |
| ACTGAGTGTGTGATTATGTT+AGG | - | chr3_1:37586963-37586982 | None:intergenic | 35.0% | |
| ATAATCACACACTCAGTCAT+AGG | + | chr3_1:37586966-37586985 | Msa0357080:intron | 35.0% | |
| GTAGAAACTGAACCATAAAC+AGG | - | chr3_1:37587079-37587098 | None:intergenic | 35.0% | |
| GGTTTGGCAAAAAATAGGTT+TGG | - | chr3_1:37587127-37587146 | None:intergenic | 35.0% | |
| ! | AAAGCGGTTTGGCAAAAAAT+AGG | - | chr3_1:37587132-37587151 | None:intergenic | 35.0% |
| !!! | ATTTTTTGCCAAACCGCTTT+TGG | + | chr3_1:37587132-37587151 | Msa0357080:intron | 35.0% |
| GCAAAAGCCGTTAATTAAAC+TGG | - | chr3_1:37587298-37587317 | None:intergenic | 35.0% | |
| GTGATTTATGGTAACAAGGA+TGG | - | chr3_1:37587789-37587808 | None:intergenic | 35.0% | |
| TCATGACATGAGCTATCAAA+GGG | - | chr3_1:37587918-37587937 | None:intergenic | 35.0% | |
| TTCATGACATGAGCTATCAA+AGG | - | chr3_1:37587919-37587938 | None:intergenic | 35.0% | |
| CTAATAAGAACACTTCATGC+AGG | - | chr3_1:37588095-37588114 | None:intergenic | 35.0% | |
| GGAACATATCTAGTGAGAAA+GGG | + | chr3_1:37588164-37588183 | Msa0357080:intron | 35.0% | |
| ATCCGTGTATTTATATCCGA+TGG | - | chr3_1:37588231-37588250 | None:intergenic | 35.0% | |
| AATGTGTGGTAGTTGAAAAG+TGG | - | chr3_1:37588278-37588297 | None:intergenic | 35.0% | |
| AAGGTGATATCACAATGGAT+CGG | - | chr3_1:37588351-37588370 | None:intergenic | 35.0% | |
| !!! | TGCCCTTTTTTTAGAAGTTG+TGG | - | chr3_1:37588408-37588427 | None:intergenic | 35.0% |
| AGAAGTTGTGGTTTCAAACA+GGG | - | chr3_1:37588508-37588527 | None:intergenic | 35.0% | |
| TAGAAGTTGTGGTTTCAAAC+AGG | - | chr3_1:37588397-37588416 | None:intergenic | 35.0% | |
| TTGAGAAGAAGTCAATTCGT+AGG | + | chr3_1:37588555-37588574 | Msa0357080:intron | 35.0% | |
| GTTGAAAATTGGGTAAATCG+TGG | + | chr3_1:37588577-37588596 | Msa0357080:intron | 35.0% | |
| ! | AATCTGTACTCATGACTTGT+CGG | + | chr3_1:37588642-37588661 | Msa0357080:intron | 35.0% |
| AAAAGAGGAATAAAGGAGGA+GGG | + | chr3_1:37588817-37588836 | Msa0357080:intron | 35.0% | |
| TATCCTTATGTGAGAACAAG+AGG | - | chr3_1:37589035-37589054 | None:intergenic | 35.0% | |
| AAATAATGTGTCATCGTGAC+AGG | - | chr3_1:37589113-37589132 | None:intergenic | 35.0% | |
| !! | GAAGATTTTCAAGGAGATGT+TGG | - | chr3_1:37589398-37589417 | None:intergenic | 35.0% |
| TAAGGAAGGGAAAATGCATT+TGG | - | chr3_1:37589471-37589490 | None:intergenic | 35.0% | |
| GTCTATGCATTTGATAAGGA+AGG | - | chr3_1:37589485-37589504 | None:intergenic | 35.0% | |
| ! | GTTGGTCTATGCATTTGATA+AGG | - | chr3_1:37589489-37589508 | None:intergenic | 35.0% |
| ! | TATTGGTTGGCATATGATGT+TGG | - | chr3_1:37589507-37589526 | None:intergenic | 35.0% |
| GGTCTCTAAGTTATATTGGT+TGG | - | chr3_1:37589520-37589539 | None:intergenic | 35.0% | |
| ACTGTTCTATACACTTGATC+GGG | + | chr3_1:37589577-37589596 | Msa0357080:intron | 35.0% | |
| TGAAAACATTAGAAGCTGAG+AGG | + | chr3_1:37589603-37589622 | Msa0357080:intron | 35.0% | |
| ATCTTACCTAAGATAGGAAG+GGG | - | chr3_1:37589783-37589802 | None:intergenic | 35.0% | |
| GATCTTACCTAAGATAGGAA+GGG | - | chr3_1:37589784-37589803 | None:intergenic | 35.0% | |
| AGATCTTACCTAAGATAGGA+AGG | - | chr3_1:37589785-37589804 | None:intergenic | 35.0% | |
| TGTATGACATTAGACCTTGA+CGG | + | chr3_1:37589837-37589856 | Msa0357080:intron | 35.0% | |
| CTTTGAATCACAGGTATTAC+CGG | + | chr3_1:37589875-37589894 | Msa0357080:intron | 35.0% | |
| CAACTTTATTGCAGAATCTG+TGG | - | chr3_1:37589910-37589929 | None:intergenic | 35.0% | |
| CCTTAAGCACTTCTTCATTA+TGG | - | chr3_1:37589943-37589962 | None:intergenic | 35.0% | |
| !! | CCATAATGAAGAAGTGCTTA+AGG | + | chr3_1:37589940-37589959 | Msa0357080:CDS | 35.0% |
| !! | AATGAAGAAGTGCTTAAGGT+AGG | + | chr3_1:37589944-37589963 | Msa0357080:intron | 35.0% |
| !! | ATGAAGAAGTGCTTAAGGTA+GGG | + | chr3_1:37589945-37589964 | Msa0357080:intron | 35.0% |
| TAAGGTAGGGTTATAACACA+TGG | + | chr3_1:37589958-37589977 | Msa0357080:intron | 35.0% | |
| TCCTTCCTGATTATTCTATG+TGG | + | chr3_1:37589990-37590009 | Msa0357080:intron | 35.0% | |
| ACCACATAGAATAATCAGGA+AGG | - | chr3_1:37589994-37590013 | None:intergenic | 35.0% | |
| GAAGTAGGACTAATATTCTC+AGG | - | chr3_1:37590073-37590092 | None:intergenic | 35.0% | |
| GTATCTTCCATTGATCATCT+AGG | - | chr3_1:37590112-37590131 | None:intergenic | 35.0% | |
| TAGTAGCAGAGAAACTAGAA+TGG | + | chr3_1:37590175-37590194 | Msa0357080:CDS | 35.0% | |
| AGTAGCAGAGAAACTAGAAT+GGG | + | chr3_1:37590176-37590195 | Msa0357080:CDS | 35.0% | |
| ! | TTGCAAGCCATCATACTTTT+AGG | - | chr3_1:37590338-37590357 | None:intergenic | 35.0% |
| ! | AGTATGATGGCTTGCAATAT+AGG | + | chr3_1:37590341-37590360 | Msa0357080:intron | 35.0% |
| ! | GTATGATGGCTTGCAATATA+GGG | + | chr3_1:37590342-37590361 | Msa0357080:intron | 35.0% |
| !!! | CTTTGGGGTAATAGTCATTT+TGG | + | chr3_1:37590405-37590424 | Msa0357080:intron | 35.0% |
| ! | AAGGGTTATTGTGAGTATTG+AGG | + | chr3_1:37590631-37590650 | Msa0357080:intron | 35.0% |
| !! | AGGGTTATTGTGAGTATTGA+GGG | + | chr3_1:37590632-37590651 | Msa0357080:intron | 35.0% |
| ATGAACAAAGTGCACAATCA+GGG | + | chr3_1:37590682-37590701 | Msa0357080:intron | 35.0% | |
| ! | TAACCTTCTAAAGATCTACG+GGG | - | chr3_1:37590784-37590803 | None:intergenic | 35.0% |
| GAAAGCTTGTGATTGTGTTA+AGG | - | chr3_1:37591042-37591061 | None:intergenic | 35.0% | |
| TAACGGTATCAAACAGCAAA+GGG | - | chr3_1:37591078-37591097 | None:intergenic | 35.0% | |
| CAGATAGCAATAGATAGTAG+TGG | + | chr3_1:37591300-37591319 | Msa0357080:intron | 35.0% | |
| TGGACCACACTAAAATGATT+TGG | - | chr3_1:37591408-37591427 | None:intergenic | 35.0% | |
| ! | TCGTTTATATTTGAGACCAG+AGG | - | chr3_1:37591499-37591518 | None:intergenic | 35.0% |
| ATGCTTAAAATCAAGACCCA+AGG | + | chr3_1:37591714-37591733 | Msa0357080:intron | 35.0% | |
| TGCTTAAAATCAAGACCCAA+GGG | + | chr3_1:37591715-37591734 | Msa0357080:intron | 35.0% | |
| AAATTGGACTTTACTCCCTT+GGG | - | chr3_1:37591733-37591752 | None:intergenic | 35.0% | |
| TTTGGAGGAAGTTCAGAAAT+TGG | - | chr3_1:37591749-37591768 | None:intergenic | 35.0% | |
| TGTAGGATTGAGTAATTTGG+AGG | - | chr3_1:37591764-37591783 | None:intergenic | 35.0% | |
| CACATAGTTCCTAAAGTTGT+AGG | - | chr3_1:37591781-37591800 | None:intergenic | 35.0% | |
| ACTAAGATTTCTCTTACTGC+AGG | + | chr3_1:37591851-37591870 | Msa0357080:intron | 35.0% | |
| TAAGTTTCAGATGCAGATGA+AGG | + | chr3_1:37591903-37591922 | Msa0357080:CDS | 35.0% | |
| ! | CCAACAATACACTTTGTTTC+AGG | - | chr3_1:37591934-37591953 | None:intergenic | 35.0% |
| CCTGAAACAAAGTGTATTGT+TGG | + | chr3_1:37591931-37591950 | Msa0357080:CDS | 35.0% | |
| TGTATTGTTGGGAATCATGA+AGG | + | chr3_1:37591943-37591962 | Msa0357080:CDS | 35.0% | |
| !! | AACTGATTTGACTTGAGCAT+TGG | + | chr3_1:37592052-37592071 | Msa0357080:three_prime_UTR | 35.0% |
| TTGTCTGCAATGATTGACAA+GGG | - | chr3_1:37592118-37592137 | None:intergenic | 35.0% | |
| AAGATGACTCAAGAAATCCA+TGG | + | chr3_1:37592145-37592164 | Msa0357080:three_prime_UTR | 35.0% | |
| AGATGACTCAAGAAATCCAT+GGG | + | chr3_1:37592146-37592165 | Msa0357080:three_prime_UTR | 35.0% | |
| AGAAATCCATGGGTTTGATA+TGG | + | chr3_1:37592156-37592175 | Msa0357080:three_prime_UTR | 35.0% | |
| ! | TCTTTTCCATATCAAACCCA+TGG | - | chr3_1:37592165-37592184 | None:intergenic | 35.0% |
| ! | ATCTGCATTCCAACTGTTTT+TGG | + | chr3_1:37592301-37592320 | Msa0357080:three_prime_UTR | 35.0% |
| AATGAAACGACGTGACATGA+AGG | + | chr3_1:37584361-37584380 | Msa0357080:five_prime_UTR | 40.0% | |
| TTTCTCTTTCTACGACGCTT+TGG | - | chr3_1:37584667-37584686 | None:intergenic | 40.0% | |
| AGGATTGCAAAAGGAAGAAG+AGG | + | chr3_1:37584691-37584710 | Msa0357080:CDS | 40.0% | |
| AAGGTATAGAGAGAGAGAGA+GGG | - | chr3_1:37584767-37584786 | None:intergenic | 40.0% | |
| ! | AAAGGTATAGAGAGAGAGAG+AGG | - | chr3_1:37584768-37584787 | None:intergenic | 40.0% |
| CAAATGTGAATTCCGTAAGC+TGG | - | chr3_1:37584855-37584874 | None:intergenic | 40.0% | |
| CAGCTTACGGAATTCACATT+TGG | + | chr3_1:37584853-37584872 | Msa0357080:CDS | 40.0% | |
| CCGGGTAGAAGAACAATTAT+TGG | + | chr3_1:37585092-37585111 | Msa0357080:intron | 40.0% | |
| GAATCATTCGGCTGAATTCT+GGG | + | chr3_1:37585280-37585299 | Msa0357080:intron | 40.0% | |
| ! | TGTTAACCCTCTAGTTCCTA+GGG | - | chr3_1:37585320-37585339 | None:intergenic | 40.0% |
| TAGAGGGTTAACACCAATTG+CGG | + | chr3_1:37585327-37585346 | Msa0357080:intron | 40.0% | |
| ! | GTGTTTAAAGTAGCACCTAG+GGG | - | chr3_1:37585353-37585372 | None:intergenic | 40.0% |
| ! | GGTGTTTAAAGTAGCACCTA+GGG | - | chr3_1:37585354-37585373 | None:intergenic | 40.0% |
| ! | TGGTGTTTAAAGTAGCACCT+AGG | - | chr3_1:37585355-37585374 | None:intergenic | 40.0% |
| TTATCTCAACCGCAATGCAA+TGG | - | chr3_1:37585375-37585394 | None:intergenic | 40.0% | |
| TTGCATTGCGGTTGAGATAA+TGG | + | chr3_1:37585375-37585394 | Msa0357080:intron | 40.0% | |
| ! | TCAACTTATTGCTACTGGCT+TGG | + | chr3_1:37585477-37585496 | Msa0357080:intron | 40.0% |
| CTGCTAGATATATGCAGAGA+GGG | - | chr3_1:37585626-37585645 | None:intergenic | 40.0% | |
| ACTGCTAGATATATGCAGAG+AGG | - | chr3_1:37585627-37585646 | None:intergenic | 40.0% | |
| ATAAGTGATTCCTCCAAGGT+GGG | - | chr3_1:37585654-37585673 | None:intergenic | 40.0% | |
| TATAAGTGATTCCTCCAAGG+TGG | - | chr3_1:37585655-37585674 | None:intergenic | 40.0% | |
| !!! | TTTTGAAACCATGGAGTTGG+AGG | + | chr3_1:37585701-37585720 | Msa0357080:intron | 40.0% |
| CATTACTATTGCGGTATAGC+AGG | - | chr3_1:37585904-37585923 | None:intergenic | 40.0% | |
| ACTTGGTTCACCTCTTTGAA+AGG | + | chr3_1:37585991-37586010 | Msa0357080:intron | 40.0% | |
| TGACAGTGTAAAGGGTTACT+TGG | - | chr3_1:37586127-37586146 | None:intergenic | 40.0% | |
| CCCTTTACACTGTCATTCTT+AGG | + | chr3_1:37586132-37586151 | Msa0357080:intron | 40.0% | |
| CCCTAAGAATGACAGTGTAA+AGG | - | chr3_1:37586136-37586155 | None:intergenic | 40.0% | |
| !! | TCAGCTGACTTTGATTTGAC+AGG | + | chr3_1:37586323-37586342 | Msa0357080:intron | 40.0% |
| !! | CAGCTGACTTTGATTTGACA+GGG | + | chr3_1:37586324-37586343 | Msa0357080:intron | 40.0% |
| GGTTGCACTGCTATTGAATT+AGG | + | chr3_1:37586413-37586432 | Msa0357080:CDS | 40.0% | |
| ! | AGGATAAGGAGGAGTTTGTT+AGG | - | chr3_1:37586943-37586962 | None:intergenic | 40.0% |
| ! | TAGCTGAGCCAGTTTAAAAC+TGG | - | chr3_1:37587403-37587422 | None:intergenic | 40.0% |
| !! | ATGTGGCATGTTGGTTCTAT+TGG | + | chr3_1:37587567-37587586 | Msa0357080:intron | 40.0% |
| TGGAACGATTAAGGTCTTCT+GGG | - | chr3_1:37587672-37587691 | None:intergenic | 40.0% | |
| AAGACCTTAATCGTTCCACT+AGG | + | chr3_1:37587674-37587693 | Msa0357080:intron | 40.0% | |
| AGACCTTAATCGTTCCACTA+GGG | + | chr3_1:37587675-37587694 | Msa0357080:intron | 40.0% | |
| ! | TTTCTGAGGAGTTAATCAGC+TGG | + | chr3_1:37587830-37587849 | Msa0357080:intron | 40.0% |
| ! | TTCTGAGGAGTTAATCAGCT+GGG | + | chr3_1:37587831-37587850 | Msa0357080:intron | 40.0% |
| AATCAGATACTTTGTGGCAG+GGG | - | chr3_1:37587864-37587883 | None:intergenic | 40.0% | |
| CAATCAGATACTTTGTGGCA+GGG | - | chr3_1:37587865-37587884 | None:intergenic | 40.0% | |
| GAAGCCAATCAGATACTTTG+TGG | - | chr3_1:37587870-37587889 | None:intergenic | 40.0% | |
| GGGAACATATCTAGTGAGAA+AGG | + | chr3_1:37588163-37588182 | Msa0357080:intron | 40.0% | |
| TATCCTTATGTGAGAGTGAG+AGG | + | chr3_1:37588187-37588206 | Msa0357080:intron | 40.0% | |
| TGATATCACAATGGATCGGA+AGG | - | chr3_1:37588347-37588366 | None:intergenic | 40.0% | |
| ! | CTTCTAAAAAAAGGGCAACC+CGG | + | chr3_1:37588411-37588430 | Msa0357080:intron | 40.0% |
| CGTACAATACACCAAATGGT+GGG | - | chr3_1:37588477-37588496 | None:intergenic | 40.0% | |
| TTGTGGTTTCAAACAGGGTA+AGG | - | chr3_1:37588503-37588522 | None:intergenic | 40.0% | |
| TTTGATGAGTGAACAGCCAA+GGG | - | chr3_1:37588726-37588745 | None:intergenic | 40.0% | |
| CAAAAGAGGAATAAAGGAGG+AGG | + | chr3_1:37588816-37588835 | Msa0357080:intron | 40.0% | |
| AAAGAGGAATAAAGGAGGAG+GGG | + | chr3_1:37588818-37588837 | Msa0357080:intron | 40.0% | |
| TGTGTGTGGTAGTTGAAAAG+TGG | + | chr3_1:37588950-37588969 | Msa0357080:intron | 40.0% | |
| GAGGATGACATATCAACCAT+TGG | - | chr3_1:37589016-37589035 | None:intergenic | 40.0% | |
| CATCCTCTTGTTCTCACATA+AGG | + | chr3_1:37589029-37589048 | Msa0357080:intron | 40.0% | |
| GGAGCATATCTAGTGAGAAA+GGG | - | chr3_1:37589058-37589077 | None:intergenic | 40.0% | |
| TGACAGGTTGTATAGTGGTA+AGG | - | chr3_1:37589097-37589116 | None:intergenic | 40.0% | |
| TCCAGCATACTTCTGATGAT+TGG | + | chr3_1:37589246-37589265 | Msa0357080:intron | 40.0% | |
| ! | TCCAATCATCAGAAGTATGC+TGG | - | chr3_1:37589250-37589269 | None:intergenic | 40.0% |
| AGCATACTTCTGATGATTGG+AGG | + | chr3_1:37589249-37589268 | Msa0357080:intron | 40.0% | |
| GCATACTTCTGATGATTGGA+GGG | + | chr3_1:37589250-37589269 | Msa0357080:intron | 40.0% | |
| TTTATCCCCCTTCCTATCTT+AGG | + | chr3_1:37589774-37589793 | Msa0357080:intron | 40.0% | |
| TCTTACCTAAGATAGGAAGG+GGG | - | chr3_1:37589782-37589801 | None:intergenic | 40.0% | |
| AAGAAATAATCACGCCGTCA+AGG | - | chr3_1:37589854-37589873 | None:intergenic | 40.0% | |
| ! | GAATCTGTGGCAAAGTATTC+CGG | - | chr3_1:37589897-37589916 | None:intergenic | 40.0% |
| GTAGCAGAGAAACTAGAATG+GGG | + | chr3_1:37590177-37590196 | Msa0357080:CDS | 40.0% | |
| TGACTACTCGTTACACATTC+AGG | - | chr3_1:37590432-37590451 | None:intergenic | 40.0% | |
| TGAGGGATTATGTTAGTGTC+AGG | + | chr3_1:37590649-37590668 | Msa0357080:intron | 40.0% | |
| GAGGGATTATGTTAGTGTCA+GGG | + | chr3_1:37590650-37590669 | Msa0357080:intron | 40.0% | |
| AGGGATTATGTTAGTGTCAG+GGG | + | chr3_1:37590651-37590670 | Msa0357080:intron | 40.0% | |
| GATGAACAAAGTGCACAATC+AGG | + | chr3_1:37590681-37590700 | Msa0357080:intron | 40.0% | |
| TGACTACTCCTTACACATTC+AGG | + | chr3_1:37590741-37590760 | Msa0357080:intron | 40.0% | |
| GACTACTCCTTACACATTCA+GGG | + | chr3_1:37590742-37590761 | Msa0357080:intron | 40.0% | |
| ! | TTTTGGTCCCTGAATGTGTA+AGG | - | chr3_1:37590752-37590771 | None:intergenic | 40.0% |
| ! | CTACGGGGTAATAGTCATTT+TGG | - | chr3_1:37590769-37590788 | None:intergenic | 40.0% |
| TTACCCCGTAGATCTTTAGA+AGG | + | chr3_1:37590778-37590797 | Msa0357080:intron | 40.0% | |
| AAAGCCTTTGCTAGTTGTCA+TGG | + | chr3_1:37590847-37590866 | Msa0357080:intron | 40.0% | |
| ATAGCCATGACAACTAGCAA+AGG | - | chr3_1:37590854-37590873 | None:intergenic | 40.0% | |
| CTAACGGTATCAAACAGCAA+AGG | - | chr3_1:37591079-37591098 | None:intergenic | 40.0% | |
| CATCTTAGCTCGTGATACAT+AGG | - | chr3_1:37591149-37591168 | None:intergenic | 40.0% | |
| !! | GAGCATAGCTCAGTTGATAA+GGG | - | chr3_1:37591575-37591594 | None:intergenic | 40.0% |
| ! | TGAGCATAGCTCAGTTGATA+AGG | - | chr3_1:37591576-37591595 | None:intergenic | 40.0% |
| TATCAACTGAGCTATGCTCA+CGG | + | chr3_1:37591576-37591595 | Msa0357080:intron | 40.0% | |
| GAAATTGGACTTTACTCCCT+TGG | - | chr3_1:37591734-37591753 | None:intergenic | 40.0% | |
| AGATTTCTCTTACTGCAGGA+TGG | + | chr3_1:37591855-37591874 | Msa0357080:intron | 40.0% | |
| TGCTCAAGTCAAATCAGTTC+TGG | - | chr3_1:37592051-37592070 | None:intergenic | 40.0% | |
| !!! | TTGAGCATTGGCTAGTGTTT+TGG | + | chr3_1:37592064-37592083 | Msa0357080:three_prime_UTR | 40.0% |
| !!! | GTGTTTTGGTTCGAACTGAA+AGG | + | chr3_1:37592078-37592097 | Msa0357080:three_prime_UTR | 40.0% |
| TGCAATGATTGACAAGGGTA+GGG | - | chr3_1:37592113-37592132 | None:intergenic | 40.0% | |
| GTTGTCTGCAATGATTGACA+AGG | - | chr3_1:37592119-37592138 | None:intergenic | 40.0% | |
| AGTTATTAGCAGAGTCGGTC+AGG | + | chr3_1:37584504-37584523 | Msa0357080:five_prime_UTR | 45.0% | |
| AGGTATAGAGAGAGAGAGAG+GGG | - | chr3_1:37584766-37584785 | None:intergenic | 45.0% | |
| TAATGAGTTCCGCCTGAGAA+CGG | + | chr3_1:37585041-37585060 | Msa0357080:intron | 45.0% | |
| ! | ATAACCCTCTGGTTCCTAGT+CGG | - | chr3_1:37585145-37585164 | None:intergenic | 45.0% |
| CGAATCATTCGGCTGAATTC+TGG | + | chr3_1:37585279-37585298 | Msa0357080:intron | 45.0% | |
| ! | GTTAACCCTCTAGTTCCTAG+GGG | - | chr3_1:37585319-37585338 | None:intergenic | 45.0% |
| ! | GTGTTAACCCTCTAGTTCCT+AGG | - | chr3_1:37585321-37585340 | None:intergenic | 45.0% |
| TAAGTGATTCCTCCAAGGTG+GGG | - | chr3_1:37585653-37585672 | None:intergenic | 45.0% | |
| CCACGTCAAAGTTTAGGGAA+CGG | - | chr3_1:37585868-37585887 | None:intergenic | 45.0% | |
| TTCCCTAAACTTTGACGTGG+TGG | + | chr3_1:37585868-37585887 | Msa0357080:intron | 45.0% | |
| GAGAGAAAACTCTCCTCCTA+GGG | + | chr3_1:37586737-37586756 | Msa0357080:intron | 45.0% | |
| ATTGAAAAAGGGGGAACCCT+AGG | - | chr3_1:37586756-37586775 | None:intergenic | 45.0% | |
| ! | ATTCTGCTTTGTTCCCCATC+AGG | + | chr3_1:37587013-37587032 | Msa0357080:intron | 45.0% |
| ! | TTCTGCTTTGTTCCCCATCA+GGG | + | chr3_1:37587014-37587033 | Msa0357080:intron | 45.0% |
| CCACTAAACCAAAAGCGGTT+TGG | - | chr3_1:37587143-37587162 | None:intergenic | 45.0% | |
| !!! | CCAAACCGCTTTTGGTTTAG+TGG | + | chr3_1:37587140-37587159 | Msa0357080:intron | 45.0% |
| CCAGACCACTAAACCAAAAG+CGG | - | chr3_1:37587148-37587167 | None:intergenic | 45.0% | |
| GGAACGATTAAGGTCTTCTG+GGG | - | chr3_1:37587671-37587690 | None:intergenic | 45.0% | |
| GTGGAACGATTAAGGTCTTC+TGG | - | chr3_1:37587673-37587692 | None:intergenic | 45.0% | |
| TTTATTGATCAGGGCCCTAG+TGG | - | chr3_1:37587692-37587711 | None:intergenic | 45.0% | |
| ATCAGATACTTTGTGGCAGG+GGG | - | chr3_1:37587863-37587882 | None:intergenic | 45.0% | |
| CCAATCAGATACTTTGTGGC+AGG | - | chr3_1:37587866-37587885 | None:intergenic | 45.0% | |
| ! | CCTGCCACAAAGTATCTGAT+TGG | + | chr3_1:37587863-37587882 | Msa0357080:intron | 45.0% |
| CATCCTCTCACTCTCACATA+AGG | - | chr3_1:37588193-37588212 | None:intergenic | 45.0% | |
| GGTGGAAGGTGATATCACAA+TGG | - | chr3_1:37588356-37588375 | None:intergenic | 45.0% | |
| GAAGTTGTGGTTTCAAACGG+TGG | - | chr3_1:37588395-37588414 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3_1:37588478-37588497 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3_1:37588481-37588500 | None:intergenic | 45.0% | |
| GTTTGATGAGTGAACAGCCA+AGG | - | chr3_1:37588727-37588746 | None:intergenic | 45.0% | |
| AAGAGGAATAAAGGAGGAGG+GGG | + | chr3_1:37588819-37588838 | Msa0357080:intron | 45.0% | |
| TGTGAAGAACAAGGTCTGAG+AGG | + | chr3_1:37588861-37588880 | Msa0357080:intron | 45.0% | |
| TCTGAGAGGTTTGATGAAGC+AGG | + | chr3_1:37588875-37588894 | Msa0357080:intron | 45.0% | |
| AGAGGTTTGATGAAGCAGGA+TGG | + | chr3_1:37588879-37588898 | Msa0357080:intron | 45.0% | |
| GAGGTTTGATGAAGCAGGAT+GGG | + | chr3_1:37588880-37588899 | Msa0357080:intron | 45.0% | |
| ! | GGGAGCATATCTAGTGAGAA+AGG | - | chr3_1:37589059-37589078 | None:intergenic | 45.0% |
| CATCGTGACAGGTTGTATAG+TGG | - | chr3_1:37589102-37589121 | None:intergenic | 45.0% | |
| !! | GAGGGCATTACAAAACATGC+TGG | + | chr3_1:37589268-37589287 | Msa0357080:intron | 45.0% |
| ! | GACAGTTTGGTTAGCTCCTT+CGG | + | chr3_1:37589364-37589383 | Msa0357080:intron | 45.0% |
| ! | GATGTTGGTTAATGCACCGA+AGG | - | chr3_1:37589383-37589402 | None:intergenic | 45.0% |
| GGTAGGGTTATAACACATGG+TGG | + | chr3_1:37589961-37589980 | Msa0357080:intron | 45.0% | |
| ACACTGCTCGAAAAAGACGT+CGG | - | chr3_1:37590809-37590828 | None:intergenic | 45.0% | |
| AACTTGCAGGAGCTGTCTAA+CGG | - | chr3_1:37591095-37591114 | None:intergenic | 45.0% | |
| !! | TTCTGCCTTCGTTAACTTGC+AGG | - | chr3_1:37591108-37591127 | None:intergenic | 45.0% |
| ATCAACTGAGCTATGCTCAC+GGG | + | chr3_1:37591577-37591596 | Msa0357080:intron | 45.0% | |
| TCATATGCCATGTCTGCTTC+TGG | - | chr3_1:37592025-37592044 | None:intergenic | 45.0% | |
| CTGCAATGATTGACAAGGGT+AGG | - | chr3_1:37592114-37592133 | None:intergenic | 45.0% | |
| !! | TACAAAAAAAATAAAAATAA+AGG | + | chr3_1:37587096-37587115 | Msa0357080:intron | 5.0% |
| !!! | ATTACAATATTAATTTTATT+TGG | - | chr3_1:37590981-37591000 | None:intergenic | 5.0% |
| AGTCGGTCAGGACCAATTTG+AGG | + | chr3_1:37584516-37584535 | Msa0357080:five_prime_UTR | 50.0% | |
| TATAGAGAGAGAGAGAGGGG+GGG | - | chr3_1:37584763-37584782 | None:intergenic | 50.0% | |
| GTATAGAGAGAGAGAGAGGG+GGG | - | chr3_1:37584764-37584783 | None:intergenic | 50.0% | |
| GGTATAGAGAGAGAGAGAGG+GGG | - | chr3_1:37584765-37584784 | None:intergenic | 50.0% | |
| GTCGGACTTTACTTCCCTCT+CGG | + | chr3_1:37585114-37585133 | Msa0357080:intron | 50.0% | |
| CGGCTGAATTCTGGGTTTCT+AGG | + | chr3_1:37585288-37585307 | Msa0357080:intron | 50.0% | |
| ATCTCTCGTCCTCATCTGTG+AGG | + | chr3_1:37585589-37585608 | Msa0357080:intron | 50.0% | |
| GACTGAAAGCCTCACAGATG+AGG | - | chr3_1:37585601-37585620 | None:intergenic | 50.0% | |
| TCTAGCAGTATTCCCCACCT+TGG | + | chr3_1:37585638-37585657 | Msa0357080:intron | 50.0% | |
| ! | AATGTTGGCCTCCAACTCCA+TGG | - | chr3_1:37585712-37585731 | None:intergenic | 50.0% |
| CCGTTCCCTAAACTTTGACG+TGG | + | chr3_1:37585865-37585884 | Msa0357080:intron | 50.0% | |
| GGCCACCACGTCAAAGTTTA+GGG | - | chr3_1:37585873-37585892 | None:intergenic | 50.0% | |
| TGGCCACCACGTCAAAGTTT+AGG | - | chr3_1:37585874-37585893 | None:intergenic | 50.0% | |
| !! | CTTTGATTTGACAGGGCAGC+TGG | + | chr3_1:37586331-37586350 | Msa0357080:CDS | 50.0% |
| ATTTGACAGGGCAGCTGGTA+TGG | + | chr3_1:37586336-37586355 | Msa0357080:CDS | 50.0% | |
| TCATTCAGCAACATGGCTCC+AGG | - | chr3_1:37586362-37586381 | None:intergenic | 50.0% | |
| GGAGAGAAAACTCTCCTCCT+AGG | + | chr3_1:37586736-37586755 | Msa0357080:intron | 50.0% | |
| ! | TCTGCTTTGTTCCCCATCAG+GGG | + | chr3_1:37587015-37587034 | Msa0357080:intron | 50.0% |
| AAATCCTGCACACCCCTGAT+GGG | - | chr3_1:37587030-37587049 | None:intergenic | 50.0% | |
| !!! | CCGCTTTTGGTTTAGTGGTC+TGG | + | chr3_1:37587145-37587164 | Msa0357080:intron | 50.0% |
| !! | TTCTGGGGTATTGCAGCTGA+CGG | - | chr3_1:37587656-37587675 | None:intergenic | 50.0% |
| AGGAGTTAATCAGCTGGGCA+TGG | + | chr3_1:37587836-37587855 | Msa0357080:intron | 50.0% | |
| AATGTTCACGTACAGCCCCT+TGG | + | chr3_1:37588052-37588071 | Msa0357080:intron | 50.0% | |
| ! | TGCAGGAAGAGAGTGTACGA+GGG | - | chr3_1:37588078-37588097 | None:intergenic | 50.0% |
| ! | ATGCAGGAAGAGAGTGTACG+AGG | - | chr3_1:37588079-37588098 | None:intergenic | 50.0% |
| ACCTTCCACCTCCTCAATCT+AGG | + | chr3_1:37588366-37588385 | Msa0357080:intron | 50.0% | |
| AACGGTGGAAGCCTAGATTG+AGG | - | chr3_1:37588380-37588399 | None:intergenic | 50.0% | |
| ! | TCATGACTTGTCGGAGACCA+TGG | + | chr3_1:37588651-37588670 | Msa0357080:intron | 50.0% |
| ! | GAGAGATTTTGCGGTCACGA+AGG | - | chr3_1:37588700-37588719 | None:intergenic | 50.0% |
| ! | CAAGGGAGGGAGAGATTTTG+CGG | - | chr3_1:37588709-37588728 | None:intergenic | 50.0% |
| ATGAGTGAACAGCCAAGGGA+GGG | - | chr3_1:37588722-37588741 | None:intergenic | 50.0% | |
| AATAAAGGAGGAGGGGGTCA+TGG | + | chr3_1:37588825-37588844 | Msa0357080:intron | 50.0% | |
| GAAGCAGGATGGGAAAGAGA+AGG | + | chr3_1:37588890-37588909 | Msa0357080:intron | 50.0% | |
| AGGATGGGAAAGAGAAGGTG+AGG | + | chr3_1:37588895-37588914 | Msa0357080:intron | 50.0% | |
| GGATGGGAAAGAGAAGGTGA+GGG | + | chr3_1:37588896-37588915 | Msa0357080:intron | 50.0% | |
| GATGGGAAAGAGAAGGTGAG+GGG | + | chr3_1:37588897-37588916 | Msa0357080:intron | 50.0% | |
| AGCTGAGAGGCTAAGACGTT+AGG | + | chr3_1:37589616-37589635 | Msa0357080:intron | 50.0% | |
| GCTGAGAGGCTAAGACGTTA+GGG | + | chr3_1:37589617-37589636 | Msa0357080:intron | 50.0% | |
| CCACACGTAGATCTAAACGC+TGG | - | chr3_1:37589694-37589713 | None:intergenic | 50.0% | |
| CCAGCGTTTAGATCTACGTG+TGG | + | chr3_1:37589691-37589710 | Msa0357080:intron | 50.0% | |
| AGAACGAAGTCGAAACCTCC+AGG | - | chr3_1:37590240-37590259 | None:intergenic | 50.0% | |
| GGAGGTTTCGACTTCGTTCT+TGG | + | chr3_1:37590240-37590259 | Msa0357080:CDS | 50.0% | |
| CACTGCTCGAAAAAGACGTC+GGG | - | chr3_1:37590808-37590827 | None:intergenic | 50.0% | |
| CAGCTCCTGCAAGTTAACGA+AGG | + | chr3_1:37591100-37591119 | Msa0357080:intron | 50.0% | |
| GAGGTTTCCAGAAGCAGACA+TGG | + | chr3_1:37592015-37592034 | Msa0357080:three_prime_UTR | 50.0% | |
| CGGAATGATCCGTTCTCAGG+CGG | - | chr3_1:37585053-37585072 | None:intergenic | 55.0% | |
| CGCCTGAGAACGGATCATTC+CGG | + | chr3_1:37585051-37585070 | Msa0357080:intron | 55.0% | |
| CTCCGGAATGATCCGTTCTC+AGG | - | chr3_1:37585056-37585075 | None:intergenic | 55.0% | |
| ! | ACCCTCTAGTTCCTAGGGGA+GGG | - | chr3_1:37585315-37585334 | None:intergenic | 55.0% |
| ! | AACCCTCTAGTTCCTAGGGG+AGG | - | chr3_1:37585316-37585335 | None:intergenic | 55.0% |
| TAACACCAATTGCGGCCCCT+AGG | + | chr3_1:37585335-37585354 | Msa0357080:intron | 55.0% | |
| AGCAGTATTCCCCACCTTGG+AGG | + | chr3_1:37585641-37585660 | Msa0357080:intron | 55.0% | |
| GCGGTATAGCAGGTGCAGTA+TGG | - | chr3_1:37585894-37585913 | None:intergenic | 55.0% | |
| GAAAAAGGGGGAACCCTAGG+AGG | - | chr3_1:37586753-37586772 | None:intergenic | 55.0% | |
| AATCCTGCACACCCCTGATG+GGG | - | chr3_1:37587029-37587048 | None:intergenic | 55.0% | |
| CAAATCCTGCACACCCCTGA+TGG | - | chr3_1:37587031-37587050 | None:intergenic | 55.0% | |
| ! | CATCAGGGGTGTGCAGGATT+TGG | + | chr3_1:37587029-37587048 | Msa0357080:intron | 55.0% |
| ! | GGGTATTGCAGCTGACGGAT+CGG | - | chr3_1:37587651-37587670 | None:intergenic | 55.0% |
| GGGCCCTAGTGGAACGATTA+AGG | - | chr3_1:37587681-37587700 | None:intergenic | 55.0% | |
| ! | AGAGAGTGTACGAGGGCCAA+GGG | - | chr3_1:37588071-37588090 | None:intergenic | 55.0% |
| ! | AAGAGAGTGTACGAGGGCCA+AGG | - | chr3_1:37588072-37588091 | None:intergenic | 55.0% |
| GCCTAGATTGAGGAGGTGGA+AGG | - | chr3_1:37588370-37588389 | None:intergenic | 55.0% | |
| GGAAGCCTAGATTGAGGAGG+TGG | - | chr3_1:37588374-37588393 | None:intergenic | 55.0% | |
| GGTGGAAGCCTAGATTGAGG+AGG | - | chr3_1:37588377-37588396 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | + | chr3_1:37588437-37588456 | Msa0357080:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | + | chr3_1:37588438-37588457 | Msa0357080:intron | 55.0% | |
| ! | TTTTGCGGTCACGAAGGCCA+CGG | - | chr3_1:37588694-37588713 | None:intergenic | 55.0% |
| CGCAAAATCTCTCCCTCCCT+TGG | + | chr3_1:37588707-37588726 | Msa0357080:intron | 55.0% | |
| GATGAGTGAACAGCCAAGGG+AGG | - | chr3_1:37588723-37588742 | None:intergenic | 55.0% | |
| ! | CCTCTGGTTCCTAGTCGGAG+GGG | - | chr3_1:37585140-37585159 | None:intergenic | 60.0% |
| ! | CCCTCTGGTTCCTAGTCGGA+GGG | - | chr3_1:37585141-37585160 | None:intergenic | 60.0% |
| CCCTCCGACTAGGAACCAGA+GGG | + | chr3_1:37585138-37585157 | Msa0357080:intron | 60.0% | |
| ! | ACCCTCTGGTTCCTAGTCGG+AGG | - | chr3_1:37585142-37585161 | None:intergenic | 60.0% |
| ! | CCCTCTAGTTCCTAGGGGAG+GGG | - | chr3_1:37585314-37585333 | None:intergenic | 60.0% |
| CCCCTCCCCTAGGAACTAGA+GGG | + | chr3_1:37585311-37585330 | Msa0357080:intron | 60.0% | |
| TAGCACCTAGGGGCCGCAAT+TGG | - | chr3_1:37585343-37585362 | None:intergenic | 60.0% | |
| ! | GAGAGTGTACGAGGGCCAAG+GGG | - | chr3_1:37588070-37588089 | None:intergenic | 60.0% |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3_1:37588433-37588452 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr3_1:37588449-37588468 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr3_1:37588450-37588469 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr3_1:37588449-37588468 | Msa0357080:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr3_1:37588450-37588469 | Msa0357080:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3_1:37588465-37588484 | None:intergenic | 60.0% |
| TGAAGAGGGTGAGGCGACCA+TGG | - | chr3_1:37588671-37588690 | None:intergenic | 60.0% | |
| CACGAAGGCCACGGTGAAGA+GGG | - | chr3_1:37588685-37588704 | None:intergenic | 60.0% | |
| TCACGAAGGCCACGGTGAAG+AGG | - | chr3_1:37588686-37588705 | None:intergenic | 60.0% | |
| AAGGAGGAGGGGGTCATGGT+AGG | + | chr3_1:37588829-37588848 | Msa0357080:intron | 60.0% | |
| CCCCTCCGACTAGGAACCAG+AGG | + | chr3_1:37585137-37585156 | Msa0357080:intron | 65.0% | |
| ! | GGTTTCTAGGCCCCTCCCCT+AGG | + | chr3_1:37585301-37585320 | Msa0357080:intron | 65.0% |
| GCCCCTCCCCTAGGAACTAG+AGG | + | chr3_1:37585310-37585329 | Msa0357080:intron | 65.0% | |
| ACAGGGCAGCTGGTATGGCC+TGG | + | chr3_1:37586341-37586360 | Msa0357080:CDS | 65.0% | |
| ! | GTTCCCCATCAGGGGTGTGC+AGG | + | chr3_1:37587023-37587042 | Msa0357080:intron | 65.0% |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3_1:37588432-37588451 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr3_1:37588443-37588462 | Msa0357080:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr3_1:37588444-37588463 | Msa0357080:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr3_1:37588448-37588467 | Msa0357080:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3_1:37588463-37588482 | Msa0357080:intron | 65.0% | |
| TCGCCTCACCCTCTTCACCG+TGG | + | chr3_1:37588674-37588693 | Msa0357080:intron | 65.0% | |
| AGGCCACGGTGAAGAGGGTG+AGG | - | chr3_1:37588680-37588699 | None:intergenic | 65.0% | |
| CCTAGTCGGAGGGGCCGAGA+GGG | - | chr3_1:37585131-37585150 | None:intergenic | 70.0% | |
| TCCTAGTCGGAGGGGCCGAG+AGG | - | chr3_1:37585132-37585151 | None:intergenic | 70.0% | |
| CCCTCTCGGCCCCTCCGACT+AGG | + | chr3_1:37585128-37585147 | Msa0357080:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 37584330 | 37592371 | 37584330 | ID=Msa0357080;Name=Msa0357080 |
| chr3_1 | mRNA | 37584330 | 37592371 | 37584330 | ID=Msa0357080-mRNA-1;Parent=Msa0357080;Name=Msa0357080-mRNA-1;_AED=0.09;_eAED=0.09;_QI=329|0.83|0.85|1|0.83|0.85|7|378|217 |
| chr3_1 | exon | 37584330 | 37584753 | 37584330 | ID=Msa0357080-mRNA-1:exon:6867;Parent=Msa0357080-mRNA-1 |
| chr3_1 | exon | 37584849 | 37584916 | 37584849 | ID=Msa0357080-mRNA-1:exon:6868;Parent=Msa0357080-mRNA-1 |
| chr3_1 | exon | 37586327 | 37586446 | 37586327 | ID=Msa0357080-mRNA-1:exon:6869;Parent=Msa0357080-mRNA-1 |
| chr3_1 | exon | 37589888 | 37589961 | 37589888 | ID=Msa0357080-mRNA-1:exon:6870;Parent=Msa0357080-mRNA-1 |
| chr3_1 | exon | 37590037 | 37590097 | 37590037 | ID=Msa0357080-mRNA-1:exon:6871;Parent=Msa0357080-mRNA-1 |
| chr3_1 | exon | 37590172 | 37590286 | 37590172 | ID=Msa0357080-mRNA-1:exon:6872;Parent=Msa0357080-mRNA-1 |
| chr3_1 | exon | 37591873 | 37592371 | 37591873 | ID=Msa0357080-mRNA-1:exon:6873;Parent=Msa0357080-mRNA-1 |
| chr3_1 | five_prime_UTR | 37584330 | 37584658 | 37584330 | ID=Msa0357080-mRNA-1:five_prime_utr;Parent=Msa0357080-mRNA-1 |
| chr3_1 | CDS | 37584659 | 37584753 | 37584659 | ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1 |
| chr3_1 | CDS | 37584849 | 37584916 | 37584849 | ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1 |
| chr3_1 | CDS | 37586327 | 37586446 | 37586327 | ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1 |
| chr3_1 | CDS | 37589888 | 37589961 | 37589888 | ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1 |
| chr3_1 | CDS | 37590037 | 37590097 | 37590037 | ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1 |
| chr3_1 | CDS | 37590172 | 37590286 | 37590172 | ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1 |
| chr3_1 | CDS | 37591873 | 37591993 | 37591873 | ID=Msa0357080-mRNA-1:cds;Parent=Msa0357080-mRNA-1 |
| chr3_1 | three_prime_UTR | 37591994 | 37592371 | 37591994 | ID=Msa0357080-mRNA-1:three_prime_utr;Parent=Msa0357080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
