Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1132890 | XP_024640230.1 | 96.715 | 274 | 8 | 1 | 1 | 273 | 1 | 274 | 0.0 | 550 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1132890 | sp|Q2V3H0|PP322_ARATH | 41.290 | 155 | 90 | 1 | 81 | 235 | 110 | 263 | 2.64e-35 | 131 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1132890 | G7JVZ5 | 96.715 | 274 | 8 | 1 | 1 | 273 | 1 | 274 | 0.0 | 550 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006040 | Msa1132890 | 0.802168 | 6.376088e-49 | -8.615850e-47 |
Msa0006070 | Msa1132890 | 0.807453 | 5.016542e-50 | -8.615850e-47 |
Msa0010680 | Msa1132890 | 0.815318 | 9.832286e-52 | -8.615850e-47 |
Msa0012040 | Msa1132890 | 0.814649 | 1.383396e-51 | -8.615850e-47 |
Msa0023470 | Msa1132890 | 0.817664 | 2.932668e-52 | -8.615850e-47 |
Msa0028660 | Msa1132890 | 0.808696 | 2.728695e-50 | -8.615850e-47 |
Msa0044710 | Msa1132890 | 0.827828 | 1.261132e-54 | -8.615850e-47 |
Msa0054730 | Msa1132890 | -0.818298 | 2.108707e-52 | -8.615850e-47 |
Msa0054750 | Msa1132890 | 0.800416 | 1.456070e-48 | -8.615850e-47 |
Msa0071240 | Msa1132890 | 0.830739 | 2.478779e-55 | -8.615850e-47 |
Msa0091010 | Msa1132890 | 0.857576 | 1.486105e-62 | -8.615850e-47 |
Msa0111310 | Msa1132890 | 0.807055 | 6.093077e-50 | -8.615850e-47 |
Msa0119850 | Msa1132890 | 0.845065 | 5.121963e-59 | -8.615850e-47 |
Msa0607340 | Msa1132890 | -0.801468 | 8.878360e-49 | -8.615850e-47 |
Msa0608710 | Msa1132890 | 0.819292 | 1.254120e-52 | -8.615850e-47 |
Msa0610430 | Msa1132890 | 0.800476 | 1.415640e-48 | -8.615850e-47 |
Msa0621490 | Msa1132890 | 0.812400 | 4.321608e-51 | -8.615850e-47 |
Msa0632870 | Msa1132890 | 0.808409 | 3.141572e-50 | -8.615850e-47 |
Msa0638280 | Msa1132890 | 0.831934 | 1.259409e-55 | -8.615850e-47 |
Msa0638320 | Msa1132890 | 0.842721 | 2.174874e-58 | -8.615850e-47 |
Msa0647450 | Msa1132890 | -0.828060 | 1.108909e-54 | -8.615850e-47 |
Msa0654720 | Msa1132890 | 0.807491 | 4.926615e-50 | -8.615850e-47 |
Msa0661190 | Msa1132890 | -0.843998 | 9.920830e-59 | -8.615850e-47 |
Msa0671740 | Msa1132890 | 0.813009 | 3.179137e-51 | -8.615850e-47 |
Msa0672120 | Msa1132890 | 0.803446 | 3.472064e-49 | -8.615850e-47 |
Msa0677270 | Msa1132890 | 0.837458 | 5.135983e-57 | -8.615850e-47 |
Msa0684850 | Msa1132890 | 0.812416 | 4.286453e-51 | -8.615850e-47 |
Msa0690440 | Msa1132890 | 0.808462 | 3.060748e-50 | -8.615850e-47 |
Msa0705420 | Msa1132890 | 0.809748 | 1.623271e-50 | -8.615850e-47 |
Msa0714600 | Msa1132890 | 0.800768 | 1.234265e-48 | -8.615850e-47 |
Msa0716840 | Msa1132890 | 0.800786 | 1.223866e-48 | -8.615850e-47 |
Msa0723140 | Msa1132890 | 0.800351 | 1.501480e-48 | -8.615850e-47 |
Msa0743650 | Msa1132890 | 0.805340 | 1.399472e-49 | -8.615850e-47 |
Msa0771720 | Msa1132890 | 0.802474 | 5.515130e-49 | -8.615850e-47 |
Msa0779240 | Msa1132890 | 0.806847 | 6.742912e-50 | -8.615850e-47 |
Msa0795920 | Msa1132890 | 0.974462 | 3.375303e-138 | -8.615850e-47 |
Msa0816640 | Msa1132890 | 0.802426 | 5.642433e-49 | -8.615850e-47 |
Msa0828570 | Msa1132890 | 0.805652 | 1.203963e-49 | -8.615850e-47 |
Msa0842210 | Msa1132890 | 0.809301 | 2.024745e-50 | -8.615850e-47 |
Msa0123360 | Msa1132890 | 0.805975 | 1.029800e-49 | -8.615850e-47 |
Msa0135820 | Msa1132890 | 0.827576 | 1.449327e-54 | -8.615850e-47 |
Msa0160550 | Msa1132890 | 0.808076 | 3.699939e-50 | -8.615850e-47 |
Msa0178860 | Msa1132890 | -0.819564 | 1.087213e-52 | -8.615850e-47 |
Msa0182930 | Msa1132890 | 0.822830 | 1.920443e-53 | -8.615850e-47 |
Msa0183370 | Msa1132890 | 0.853179 | 2.834939e-61 | -8.615850e-47 |
Msa0185640 | Msa1132890 | -0.800687 | 1.282285e-48 | -8.615850e-47 |
Msa0379640 | Msa1132890 | 0.802648 | 5.078044e-49 | -8.615850e-47 |
Msa0389810 | Msa1132890 | 0.804786 | 1.827542e-49 | -8.615850e-47 |
Msa0391630 | Msa1132890 | 0.825157 | 5.463689e-54 | -8.615850e-47 |
Msa0398710 | Msa1132890 | 0.821684 | 3.543176e-53 | -8.615850e-47 |
Msa0399340 | Msa1132890 | 0.858096 | 1.041583e-62 | -8.615850e-47 |
Msa0409080 | Msa1132890 | 0.814876 | 1.232267e-51 | -8.615850e-47 |
Msa0419620 | Msa1132890 | -0.807761 | 4.315675e-50 | -8.615850e-47 |
Msa0424040 | Msa1132890 | 0.804610 | 1.988608e-49 | -8.615850e-47 |
Msa0429290 | Msa1132890 | 0.805323 | 1.411072e-49 | -8.615850e-47 |
Msa0442200 | Msa1132890 | 0.833400 | 5.450370e-56 | -8.615850e-47 |
Msa0442850 | Msa1132890 | 0.813726 | 2.212211e-51 | -8.615850e-47 |
Msa0462590 | Msa1132890 | 0.819142 | 1.356642e-52 | -8.615850e-47 |
Msa0475580 | Msa1132890 | 0.800199 | 1.611681e-48 | -8.615850e-47 |
Msa0477080 | Msa1132890 | 0.818025 | 2.431323e-52 | -8.615850e-47 |
Msa0982270 | Msa1132890 | 0.808363 | 3.212928e-50 | -8.615850e-47 |
Msa0992490 | Msa1132890 | -0.806863 | 6.689357e-50 | -8.615850e-47 |
Msa1012830 | Msa1132890 | 0.814237 | 1.706378e-51 | -8.615850e-47 |
Msa1018650 | Msa1132890 | 0.818546 | 1.852830e-52 | -8.615850e-47 |
Msa1021540 | Msa1132890 | 0.823087 | 1.673241e-53 | -8.615850e-47 |
Msa1037700 | Msa1132890 | -0.809620 | 1.729112e-50 | -8.615850e-47 |
Msa1051200 | Msa1132890 | 0.806881 | 6.631941e-50 | -8.615850e-47 |
Msa1054410 | Msa1132890 | 0.836957 | 6.900991e-57 | -8.615850e-47 |
Msa1079730 | Msa1132890 | -0.815444 | 9.215038e-52 | -8.615850e-47 |
Msa0240780 | Msa1132890 | 0.812076 | 5.085209e-51 | -8.615850e-47 |
Msa0258670 | Msa1132890 | -0.801870 | 7.343644e-49 | -8.615850e-47 |
Msa0260950 | Msa1132890 | -0.800269 | 1.560214e-48 | -8.615850e-47 |
Msa0265380 | Msa1132890 | 0.813887 | 2.038333e-51 | -8.615850e-47 |
Msa0267310 | Msa1132890 | 0.948117 | 1.781669e-106 | -8.615850e-47 |
Msa0307950 | Msa1132890 | 0.806691 | 7.273190e-50 | -8.615850e-47 |
Msa0309550 | Msa1132890 | 0.822537 | 2.246893e-53 | -8.615850e-47 |
Msa0318980 | Msa1132890 | 0.804469 | 2.128578e-49 | -8.615850e-47 |
Msa0326670 | Msa1132890 | 0.800097 | 1.690545e-48 | -8.615850e-47 |
Msa0344830 | Msa1132890 | 0.803442 | 3.479873e-49 | -8.615850e-47 |
Msa0352330 | Msa1132890 | 0.865143 | 7.309384e-65 | -8.615850e-47 |
Msa0357080 | Msa1132890 | 0.800457 | 1.428088e-48 | -8.615850e-47 |
Msa0358170 | Msa1132890 | 0.819062 | 1.414228e-52 | -8.615850e-47 |
Msa1111630 | Msa1132890 | 0.802135 | 6.475758e-49 | -8.615850e-47 |
Msa1124540 | Msa1132890 | -0.805920 | 1.057443e-49 | -8.615850e-47 |
Msa1132890 | Msa1143930 | -0.828848 | 7.154344e-55 | -8.615850e-47 |
Msa1132890 | Msa1174870 | 0.811431 | 7.027072e-51 | -8.615850e-47 |
Msa1132890 | Msa1187520 | 0.829961 | 3.840457e-55 | -8.615850e-47 |
Msa1132890 | Msa1199560 | 0.827667 | 1.378457e-54 | -8.615850e-47 |
Msa1132890 | Msa1203250 | 0.810678 | 1.022813e-50 | -8.615850e-47 |
Msa1132890 | Msa1208180 | 0.817295 | 3.551809e-52 | -8.615850e-47 |
Msa1132890 | Msa1212760 | 0.807639 | 4.581438e-50 | -8.615850e-47 |
Msa1132890 | Msa1217810 | 0.802660 | 5.048349e-49 | -8.615850e-47 |
Msa1132890 | Msa1217830 | 0.809605 | 1.742089e-50 | -8.615850e-47 |
Msa1132890 | Msa1233500 | 0.824391 | 8.277975e-54 | -8.615850e-47 |
Msa1132890 | Msa1234690 | 0.820561 | 6.428432e-53 | -8.615850e-47 |
Msa1132890 | Msa1234730 | 0.805839 | 1.099812e-49 | -8.615850e-47 |
Msa1132890 | Msa1250890 | 0.803414 | 3.526867e-49 | -8.615850e-47 |
Msa1132890 | Msa1260130 | 0.833862 | 4.178214e-56 | -8.615850e-47 |
Msa1132890 | Msa1261470 | 0.807978 | 3.881352e-50 | -8.615850e-47 |
Msa1132890 | Msa1262920 | 0.815047 | 1.128933e-51 | -8.615850e-47 |
Msa1132890 | Msa1279210 | 0.841473 | 4.651350e-58 | -8.615850e-47 |
Msa1132890 | Msa1282920 | 0.827151 | 1.833014e-54 | -8.615850e-47 |
Msa1132890 | Msa1284220 | 0.806718 | 7.179720e-50 | -8.615850e-47 |
Msa1132890 | Msa1296880 | 0.844820 | 5.963789e-59 | -8.615850e-47 |
Msa1132890 | Msa1300050 | 0.853391 | 2.464200e-61 | -8.615850e-47 |
Msa1132890 | Msa1302100 | 0.823937 | 1.058390e-53 | -8.615850e-47 |
Msa1132890 | Msa1302190 | -0.832746 | 7.926246e-56 | -8.615850e-47 |
Msa1132890 | Msa1304180 | 0.804058 | 2.591702e-49 | -8.615850e-47 |
Msa1132890 | Msa1315110 | 0.810911 | 9.109665e-51 | -8.615850e-47 |
Msa1132890 | Msa1322190 | 0.835346 | 1.770392e-56 | -8.615850e-47 |
Msa1132890 | Msa1327550 | 0.812118 | 4.979673e-51 | -8.615850e-47 |
Msa1132890 | Msa1328700 | 0.834413 | 3.041401e-56 | -8.615850e-47 |
Msa1132890 | Msa1335970 | -0.809894 | 1.510272e-50 | -8.615850e-47 |
Msa1132890 | Msa1344010 | 0.823015 | 1.739140e-53 | -8.615850e-47 |
Msa1132890 | Msa1358610 | -0.820350 | 7.186944e-53 | -8.615850e-47 |
Msa1132890 | Msa1369530 | 0.800580 | 1.348044e-48 | -8.615850e-47 |
Msa1132890 | Msa1403340 | 0.811046 | 8.515366e-51 | -8.615850e-47 |
Msa1132890 | Msa1403680 | 0.819432 | 1.164778e-52 | -8.615850e-47 |
Msa1132890 | Msa1410290 | 0.819547 | 1.096662e-52 | -8.615850e-47 |
Msa1132890 | Msa1425010 | 0.804672 | 1.930488e-49 | -8.615850e-47 |
Msa1132890 | Msa1427830 | 0.844128 | 9.160470e-59 | -8.615850e-47 |
Msa1132890 | Msa1435370 | 0.833397 | 5.459410e-56 | -8.615850e-47 |
Msa1132890 | Msa1440000 | 0.844202 | 8.750271e-59 | -8.615850e-47 |
Msa1132890 | Msa1440910 | 0.834048 | 3.753449e-56 | -8.615850e-47 |
Msa1132890 | Msa1444740 | 0.823429 | 1.391861e-53 | -8.615850e-47 |
Msa1132890 | Msa1449250 | -0.801348 | 9.393809e-49 | -8.615850e-47 |
Msa1132890 | Msa1453780 | -0.809778 | 1.599493e-50 | -8.615850e-47 |
Msa1132890 | Msa1454110 | 0.825866 | 3.710517e-54 | -8.615850e-47 |
Msa0493630 | Msa1132890 | 0.806098 | 9.702924e-50 | -8.615850e-47 |
Msa0500360 | Msa1132890 | 0.836989 | 6.773483e-57 | -8.615850e-47 |
Msa0502100 | Msa1132890 | 0.810686 | 1.018752e-50 | -8.615850e-47 |
Msa0503200 | Msa1132890 | 0.803504 | 3.377371e-49 | -8.615850e-47 |
Msa0511720 | Msa1132890 | -0.814070 | 1.857815e-51 | -8.615850e-47 |
Msa0519220 | Msa1132890 | 0.802188 | 6.315508e-49 | -8.615850e-47 |
Msa0519740 | Msa1132890 | 0.801301 | 9.607026e-49 | -8.615850e-47 |
Msa0530950 | Msa1132890 | 0.800059 | 1.721013e-48 | -8.615850e-47 |
Msa0540070 | Msa1132890 | 0.829877 | 4.024426e-55 | -8.615850e-47 |
Msa0553220 | Msa1132890 | -0.814137 | 1.795854e-51 | -8.615850e-47 |
Msa0553460 | Msa1132890 | 0.812968 | 3.246090e-51 | -8.615850e-47 |
Msa0561130 | Msa1132890 | -0.814926 | 1.201001e-51 | -8.615850e-47 |
Msa0580420 | Msa1132890 | 0.936452 | 1.697788e-97 | -8.615850e-47 |
Msa0863770 | Msa1132890 | 0.810609 | 1.058736e-50 | -8.615850e-47 |
Msa0869120 | Msa1132890 | 0.805691 | 1.181227e-49 | -8.615850e-47 |
Msa0870150 | Msa1132890 | 0.838385 | 2.967610e-57 | -8.615850e-47 |
Msa0979100 | Msa1132890 | 0.815489 | 9.004612e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1132890 | MtrunA17_Chr5g0398991 | 96.715 | 274 | 8 | 1 | 1 | 273 | 1 | 274 | 0.0 | 550 |
Msa1132890 | MtrunA17_Chr3g0086601 | 43.976 | 166 | 91 | 2 | 71 | 235 | 90 | 254 | 1.40e-39 | 139 |
Msa1132890 | MtrunA17_Chr6g0470101 | 37.572 | 173 | 105 | 2 | 70 | 242 | 108 | 277 | 1.28e-35 | 130 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1132890 | AT1G04590.1 | 62.385 | 218 | 76 | 3 | 44 | 260 | 122 | 334 | 1.88e-95 | 286 |
Msa1132890 | AT1G04590.2 | 61.538 | 221 | 76 | 4 | 44 | 260 | 122 | 337 | 2.72e-93 | 280 |
Msa1132890 | AT4G18975.2 | 41.290 | 155 | 90 | 1 | 81 | 235 | 83 | 236 | 2.58e-36 | 130 |
Msa1132890 | AT4G18975.3 | 41.290 | 155 | 90 | 1 | 81 | 235 | 110 | 263 | 2.68e-36 | 131 |
Msa1132890 | AT4G18975.4 | 41.290 | 155 | 90 | 1 | 81 | 235 | 110 | 263 | 2.68e-36 | 131 |
Msa1132890 | AT4G18975.1 | 41.290 | 155 | 90 | 1 | 81 | 235 | 110 | 263 | 2.68e-36 | 131 |
Msa1132890 | AT4G21190.1 | 39.103 | 156 | 94 | 1 | 80 | 235 | 69 | 223 | 1.96e-34 | 126 |
Find 88 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAACAGCATCAACCAAATT+TGG | 0.112564 | 7_3:+85736787 | Msa1132890:three_prime_UTR |
AACTACACTCTTCCCAAATT+TGG | 0.156974 | 7_3:-85736800 | None:intergenic |
TGACTTCCTTCCACCTTTCT+TGG | 0.166292 | 7_3:-85736386 | None:intergenic |
TTGGAGAAGCACACAAATTC+TGG | 0.212798 | 7_3:+85734416 | Msa1132890:CDS |
TACTGTTGTGAGAAGAAATT+TGG | 0.218146 | 7_3:-85731229 | None:intergenic |
TGGGAATTAAATCTTAATAA+AGG | 0.220462 | 7_3:-85730586 | None:intergenic |
GAAATACCAAAGCATTATAT+TGG | 0.265891 | 7_3:+85731180 | Msa1132890:CDS |
GATAGTAAGGAGGCTATTTA+TGG | 0.272982 | 7_3:+85731599 | Msa1132890:CDS |
TCTTGTCCAAGGTAATTAAA+TGG | 0.274212 | 7_3:+85734317 | Msa1132890:intron |
TTTAGCGTCGAGATTGGTTT+TGG | 0.285675 | 7_3:-85737094 | None:intergenic |
CTCTTGATGCATGGGTTGCT+TGG | 0.290402 | 7_3:+85731624 | Msa1132890:CDS |
AAATTCTGGGAAATGAAAAT+TGG | 0.302899 | 7_3:+85734430 | Msa1132890:CDS |
ATATGCTTGAAGATCTTGTT+AGG | 0.315068 | 7_3:+85734518 | Msa1132890:CDS |
CAACAGCATCAACCAAATTT+GGG | 0.339260 | 7_3:+85736788 | Msa1132890:three_prime_UTR |
GGGAATTAAATCTTAATAAA+GGG | 0.347930 | 7_3:-85730585 | None:intergenic |
TGGGGTGTAACCAGTATTAC+AGG | 0.350298 | 7_3:-85730547 | None:intergenic |
AAATACCAAAGCATTATATT+GGG | 0.356702 | 7_3:+85731181 | Msa1132890:CDS |
AATGATGCAGCTTCGTGATA+TGG | 0.356783 | 7_3:+85731568 | Msa1132890:intron |
TAGTCACACCCCTGTAATAC+TGG | 0.357620 | 7_3:+85730537 | Msa1132890:five_prime_UTR |
CTGATTTGCATTCTGTTCCT+TGG | 0.362517 | 7_3:+85734455 | Msa1132890:CDS |
TCTTGATGCATGGGTTGCTT+GGG | 0.383776 | 7_3:+85731625 | Msa1132890:CDS |
TCATGATATCAGTATATTAT+CGG | 0.392240 | 7_3:+85734491 | Msa1132890:CDS |
CTTCGAAATCTTGCTAGAAA+AGG | 0.405557 | 7_3:-85730706 | None:intergenic |
TTCTCCCCAATATAATGCTT+TGG | 0.412939 | 7_3:-85731186 | None:intergenic |
ATATTTCTCAATGAACCAAT+TGG | 0.419484 | 7_3:-85731659 | None:intergenic |
TTCTCTCCACATTTCACAGC+AGG | 0.434288 | 7_3:+85730677 | Msa1132890:five_prime_UTR |
TTTATGGTGCTCTTGATGCA+TGG | 0.435289 | 7_3:+85731615 | Msa1132890:CDS |
TTATGGTGCTCTTGATGCAT+GGG | 0.444864 | 7_3:+85731616 | Msa1132890:CDS |
ACAAGATTTAGCGTCGAGAT+TGG | 0.446337 | 7_3:-85737100 | None:intergenic |
CTATAATGTTATTCGTTACA+TGG | 0.450357 | 7_3:+85736942 | Msa1132890:three_prime_UTR |
TTCCTTCCACCTTTCTTGGT+CGG | 0.454987 | 7_3:-85736382 | None:intergenic |
GAGGAAGCACCGACCAAGAA+AGG | 0.462577 | 7_3:+85736373 | Msa1132890:CDS |
GAGTCCTTTCTAGATTCATC+GGG | 0.468680 | 7_3:-85736433 | None:intergenic |
AGAGTCCTTTCTAGATTCAT+CGG | 0.468952 | 7_3:-85736434 | None:intergenic |
GAAGCAAAACACCGTGCACC+TGG | 0.470505 | 7_3:+85736851 | Msa1132890:three_prime_UTR |
ATGGATGCTGAGCAAGGGGC+AGG | 0.470928 | 7_3:+85734336 | Msa1132890:CDS |
ACTGATTCGAGCGTTAGATA+TGG | 0.471532 | 7_3:+85734384 | Msa1132890:CDS |
TATGAGTCTAATGAGTTGTA+TGG | 0.486180 | 7_3:+85736916 | Msa1132890:three_prime_UTR |
CTACTAGCTTTCTGTTCAGA+AGG | 0.486635 | 7_3:-85731156 | None:intergenic |
CATGACTTGCAGCAGGATGT+AGG | 0.489534 | 7_3:+85736744 | Msa1132890:intron |
AAGGGGCAGGGTACGACGAT+GGG | 0.490376 | 7_3:+85734349 | Msa1132890:CDS |
TATATTGCTTTGTCTTGAGA+AGG | 0.494199 | 7_3:+85731679 | Msa1132890:CDS |
ACAGTGGCATAGGATTGTTC+AGG | 0.497183 | 7_3:+85731706 | Msa1132890:CDS |
TGGAGAAGCACACAAATTCT+GGG | 0.500787 | 7_3:+85734417 | Msa1132890:CDS |
ATAAGTAAATAACCAGGGTA+TGG | 0.500985 | 7_3:-85737167 | None:intergenic |
TTCTCTTGAGAACGATTGAA+AGG | 0.506289 | 7_3:-85730624 | None:intergenic |
TATGGATGATACCGATAGTA+AGG | 0.509177 | 7_3:+85731586 | Msa1132890:CDS |
AGAAGGAACAACAGTGGCAT+AGG | 0.522391 | 7_3:+85731696 | Msa1132890:CDS |
TGTCTGCGAATATGATGGTT+GGG | 0.523771 | 7_3:-85731118 | None:intergenic |
TTAGATATGGATCATAGAGT+TGG | 0.524101 | 7_3:+85734397 | Msa1132890:CDS |
TGAAGAGAAAGATAGAGTAA+TGG | 0.524227 | 7_3:+85736321 | Msa1132890:CDS |
GCAAATGCATATGAGATGTT+AGG | 0.526460 | 7_3:+85736292 | Msa1132890:CDS |
TCTCTTGAGAACGATTGAAA+GGG | 0.528118 | 7_3:-85730623 | None:intergenic |
CAGTTCAGTACATGTGTCCC+AGG | 0.532576 | 7_3:-85736869 | None:intergenic |
CAAGGGGCAGGGTACGACGA+TGG | 0.535805 | 7_3:+85734348 | Msa1132890:CDS |
AATTGTTAATTTACATGCAT+AGG | 0.544019 | 7_3:-85737064 | None:intergenic |
TAGGCAGAGCAGAGAAACTC+TGG | 0.546935 | 7_3:-85737045 | None:intergenic |
TATGCTTGAAGATCTTGTTA+GGG | 0.547355 | 7_3:+85734519 | Msa1132890:CDS |
AATTAAATGGATGCTGAGCA+AGG | 0.557804 | 7_3:+85734330 | Msa1132890:CDS |
GAAGCCCGATGAATCTAGAA+AGG | 0.569279 | 7_3:+85736429 | Msa1132890:CDS |
TTGTCTGCGAATATGATGGT+TGG | 0.577007 | 7_3:-85731119 | None:intergenic |
ATAAATAGCCTCCTTACTAT+CGG | 0.582438 | 7_3:-85731597 | None:intergenic |
TCTAGCAAGATTTCGAAGCA+AGG | 0.586523 | 7_3:+85730711 | Msa1132890:five_prime_UTR |
ATTAAATGGATGCTGAGCAA+GGG | 0.593427 | 7_3:+85734331 | Msa1132890:CDS |
AGGACTCTGCGGACAAGTAG+CGG | 0.600526 | 7_3:+85736449 | Msa1132890:CDS |
TCTGCGGACAAGTAGCGGTA+AGG | 0.605603 | 7_3:+85736454 | Msa1132890:exon |
CTGATCAAGTCTTCAATGTG+TGG | 0.606641 | 7_3:+85736892 | Msa1132890:three_prime_UTR |
GTACATGTGTCCCAGGTGCA+CGG | 0.606681 | 7_3:-85736862 | None:intergenic |
ATGAGATGGCACAACTGCCA+AGG | 0.609782 | 7_3:-85734472 | None:intergenic |
TGGATGCTGAGCAAGGGGCA+GGG | 0.613970 | 7_3:+85734337 | Msa1132890:CDS |
TGAATGATTAATTTATCCCG+AGG | 0.615040 | 7_3:-85736262 | None:intergenic |
GAAGCACCGACCAAGAAAGG+TGG | 0.615826 | 7_3:+85736376 | Msa1132890:CDS |
AATATACTGATATCATGAGA+TGG | 0.619629 | 7_3:-85734486 | None:intergenic |
ATCGATCCTGCTGTGAAATG+TGG | 0.619764 | 7_3:-85730683 | None:intergenic |
AATACCAAAGCATTATATTG+GGG | 0.621135 | 7_3:+85731182 | Msa1132890:CDS |
TCATCTCTTCACTATCAAAG+AGG | 0.621230 | 7_3:+85736354 | Msa1132890:CDS |
TTAAATGGATGCTGAGCAAG+GGG | 0.622969 | 7_3:+85734332 | Msa1132890:CDS |
GGTACGACGATGGGAACATA+CGG | 0.625758 | 7_3:+85734358 | Msa1132890:CDS |
CACCGACCAAGAAAGGTGGA+AGG | 0.641215 | 7_3:+85736380 | Msa1132890:CDS |
GGGGTGTAACCAGTATTACA+GGG | 0.646414 | 7_3:-85730546 | None:intergenic |
AAATAAACGATTCCATACCC+TGG | 0.664809 | 7_3:+85737155 | Msa1132890:three_prime_UTR |
AAGCAAAACACCGTGCACCT+GGG | 0.674895 | 7_3:+85736852 | Msa1132890:three_prime_UTR |
GGATGATACCGATAGTAAGG+AGG | 0.675030 | 7_3:+85731589 | Msa1132890:CDS |
AAATCGAGACGATCTCCACA+TGG | 0.677780 | 7_3:-85730945 | None:intergenic |
GTCTTGAGAAGGAACAACAG+TGG | 0.701498 | 7_3:+85731690 | Msa1132890:CDS |
CAAAACAATCAACAACCATG+TGG | 0.714494 | 7_3:+85730930 | Msa1132890:exon |
TGAATCTAGAAAGGACTCTG+CGG | 0.736241 | 7_3:+85736438 | Msa1132890:CDS |
GGGTGTAACCAGTATTACAG+GGG | 0.743031 | 7_3:-85730545 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCATATTTTTATTAAAATCA+TGG | - | chr7_3:85733370-85733389 | None:intergenic | 10.0% |
!! | CAAAAATAAAATTTCAAATA+AGG | + | chr7_3:85733998-85734017 | Msa1132890:intron | 10.0% |
!! | GAATAGTAAAAAAAAATAAA+CGG | - | chr7_3:85736709-85736728 | None:intergenic | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731289-85731308 | Msa1132890:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731289-85731308 | Msa1132890:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731289-85731308 | Msa1132890:intron | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731289-85731308 | Msa1132890:intron | 100.0% |
!!! | TTATCCTAGTTTTTTTTTTT+TGG | + | chr7_3:85731268-85731287 | Msa1132890:intron | 15.0% |
!!! | TATCCTAGTTTTTTTTTTTT+GGG | + | chr7_3:85731269-85731288 | Msa1132890:intron | 15.0% |
!!! | TTTTTGAGAAAAAAAAAACT+AGG | - | chr7_3:85732842-85732861 | None:intergenic | 15.0% |
!! | AAAAGAAAATACCTATAAAT+TGG | + | chr7_3:85733835-85733854 | Msa1132890:intron | 15.0% |
!! | AATTTCAATTTCCATTATTT+GGG | - | chr7_3:85734553-85734572 | None:intergenic | 15.0% |
!! | AAATTTCAATTTCCATTATT+TGG | - | chr7_3:85734554-85734573 | None:intergenic | 15.0% |
!!! | AAATAATGGAAATTGAAATT+TGG | + | chr7_3:85734553-85734572 | Msa1132890:intron | 15.0% |
!! | ATTAATAACACTATTAGAAT+GGG | - | chr7_3:85734592-85734611 | None:intergenic | 15.0% |
!! | TAAATTAATCATTCAAAAAG+TGG | + | chr7_3:85736270-85736289 | Msa1132890:CDS | 15.0% |
!!! | TTTCTTGAAATATTTTGTAA+CGG | - | chr7_3:85736554-85736573 | None:intergenic | 15.0% |
!! | AATATTTCAAGAAAAAATTC+AGG | + | chr7_3:85736560-85736579 | Msa1132890:intron | 15.0% |
!! | GGGAATTAAATCTTAATAAA+GGG | - | chr7_3:85730588-85730607 | None:intergenic | 20.0% |
!! | TGGGAATTAAATCTTAATAA+AGG | - | chr7_3:85730589-85730608 | None:intergenic | 20.0% |
!! | AAATTCATGAATTGAAATGA+GGG | - | chr7_3:85730776-85730795 | None:intergenic | 20.0% |
!!! | AAATACCAAAGCATTATATT+GGG | + | chr7_3:85731181-85731200 | Msa1132890:CDS | 20.0% |
!!! | ATCCTAGTTTTTTTTTTTTG+GGG | + | chr7_3:85731270-85731289 | Msa1132890:intron | 20.0% |
!!! | TTATATTGATAGTTTGAGTA+TGG | + | chr7_3:85731504-85731523 | Msa1132890:intron | 20.0% |
!! | GATTAACAAATAGATGAAAT+TGG | + | chr7_3:85731812-85731831 | Msa1132890:intron | 20.0% |
!!! | TTTTACAAATGAAATGGAAT+TGG | + | chr7_3:85731839-85731858 | Msa1132890:intron | 20.0% |
!!! | TAAAGTTCCGTTTTTATTAT+CGG | + | chr7_3:85732021-85732040 | Msa1132890:intron | 20.0% |
!! | AATCTATCCGATAATAAAAA+CGG | - | chr7_3:85732031-85732050 | None:intergenic | 20.0% |
!! | ATATTCAATAATCTTTCCTT+TGG | + | chr7_3:85732568-85732587 | Msa1132890:intron | 20.0% |
!! | ATTCAAACAAAAGTTAAGTA+GGG | - | chr7_3:85732614-85732633 | None:intergenic | 20.0% |
!! | AATTCAAACAAAAGTTAAGT+AGG | - | chr7_3:85732615-85732634 | None:intergenic | 20.0% |
!!! | TAACTTTTGTTTGAATTGAT+TGG | + | chr7_3:85732618-85732637 | Msa1132890:intron | 20.0% |
!! | ATTCATATGAATTGAATACT+TGG | - | chr7_3:85732706-85732725 | None:intergenic | 20.0% |
!! | AAAGATAATAAAGTTAGTGA+AGG | - | chr7_3:85733040-85733059 | None:intergenic | 20.0% |
!!! | TTTTATTAAAATCATGGACT+TGG | - | chr7_3:85733364-85733383 | None:intergenic | 20.0% |
!!! | TTCTAAAATAAAAGCTAATG+AGG | - | chr7_3:85733448-85733467 | None:intergenic | 20.0% |
!! | AAAAGTAAACTATCACATTT+GGG | - | chr7_3:85733564-85733583 | None:intergenic | 20.0% |
!!! | CTGTTTAGATTTTTTTTATG+GGG | - | chr7_3:85733881-85733900 | None:intergenic | 20.0% |
!!! | GCTGTTTAGATTTTTTTTAT+GGG | - | chr7_3:85733882-85733901 | None:intergenic | 20.0% |
!!! | TGCTGTTTAGATTTTTTTTA+TGG | - | chr7_3:85733883-85733902 | None:intergenic | 20.0% |
!!! | ATAGAAGTATATGAAAAGAA+AGG | - | chr7_3:85734061-85734080 | None:intergenic | 20.0% |
!! | TTTCATATACTTCTATTGAT+TGG | + | chr7_3:85734065-85734084 | Msa1132890:intron | 20.0% |
!! | TACAAAATTGATAAACTTTG+TGG | - | chr7_3:85734110-85734129 | None:intergenic | 20.0% |
!!! | CAAAAAAGTATCTAATCATT+AGG | - | chr7_3:85734141-85734160 | None:intergenic | 20.0% |
!! | TCATGATATCAGTATATTAT+CGG | + | chr7_3:85734491-85734510 | Msa1132890:CDS | 20.0% |
!! | GATTAATAACACTATTAGAA+TGG | - | chr7_3:85734593-85734612 | None:intergenic | 20.0% |
!!! | AAGCTATTATTAGTTTCTTT+TGG | + | chr7_3:85734671-85734690 | Msa1132890:intron | 20.0% |
!! | TTCTACTATACTAAATTGAT+TGG | + | chr7_3:85734694-85734713 | Msa1132890:intron | 20.0% |
!!! | TCAATTTGATTTTTTTTTGG+TGG | - | chr7_3:85735252-85735271 | None:intergenic | 20.0% |
!!! | GGTTCAATTTGATTTTTTTT+TGG | - | chr7_3:85735255-85735274 | None:intergenic | 20.0% |
!!! | AGTTAAGGTTTAGAATTATA+TGG | + | chr7_3:85735610-85735629 | Msa1132890:intron | 20.0% |
!!! | TGATGAATTTTTGGTATTAA+TGG | + | chr7_3:85735991-85736010 | Msa1132890:intron | 20.0% |
!! | ACAAGATTAAATACTTAACT+CGG | + | chr7_3:85736025-85736044 | Msa1132890:intron | 20.0% |
!! | ATTACACTGTTAAAATTGTT+TGG | + | chr7_3:85736500-85736519 | Msa1132890:intron | 20.0% |
!! | AATTGTTAATTTACATGCAT+AGG | - | chr7_3:85737067-85737086 | None:intergenic | 20.0% |
!!! | AAGGGTTTTTAGGTAAAATT+GGG | - | chr7_3:85730608-85730627 | None:intergenic | 25.0% |
!!! | AAAGGGTTTTTAGGTAAAAT+TGG | - | chr7_3:85730609-85730628 | None:intergenic | 25.0% |
! | CAAATTCATGAATTGAAATG+AGG | - | chr7_3:85730777-85730796 | None:intergenic | 25.0% |
!!! | ATTTGATTATTTCTGTGTTC+TGG | + | chr7_3:85730798-85730817 | Msa1132890:intron | 25.0% |
!!! | GTGTATTTTTTCTGTTTTTC+AGG | + | chr7_3:85731038-85731057 | Msa1132890:intron | 25.0% |
!! | GAAATACCAAAGCATTATAT+TGG | + | chr7_3:85731180-85731199 | Msa1132890:CDS | 25.0% |
!! | AATACCAAAGCATTATATTG+GGG | + | chr7_3:85731182-85731201 | Msa1132890:CDS | 25.0% |
!!! | TCCTAGTTTTTTTTTTTTGG+GGG | + | chr7_3:85731271-85731290 | Msa1132890:intron | 25.0% |
! | ATATTTCTCAATGAACCAAT+TGG | - | chr7_3:85731662-85731681 | None:intergenic | 25.0% |
!! | GGTGATTTTTACAAATGAAA+TGG | + | chr7_3:85731833-85731852 | Msa1132890:intron | 25.0% |
! | ATTGTGATATTTGACCAATT+TGG | + | chr7_3:85732180-85732199 | Msa1132890:intron | 25.0% |
! | ATATTTGACCAATTTGGTTA+TGG | + | chr7_3:85732186-85732205 | Msa1132890:intron | 25.0% |
! | AACTTAATACAATCACCTAA+AGG | + | chr7_3:85732349-85732368 | Msa1132890:intron | 25.0% |
! | TTGATGAATATCTGTCATAA+TGG | + | chr7_3:85732400-85732419 | Msa1132890:intron | 25.0% |
!! | TGTTTGAATTGATTGGTTAA+TGG | + | chr7_3:85732625-85732644 | Msa1132890:intron | 25.0% |
! | AAAAAATCACAGTGAAAAAG+AGG | + | chr7_3:85732857-85732876 | Msa1132890:intron | 25.0% |
! | AATCTTTCTATAACGATAGA+GGG | - | chr7_3:85732975-85732994 | None:intergenic | 25.0% |
! | AATTGAATTGATGAAGATGA+TGG | - | chr7_3:85733250-85733269 | None:intergenic | 25.0% |
!!! | GCTTTTATTTTAGAAACGTT+TGG | + | chr7_3:85733453-85733472 | Msa1132890:intron | 25.0% |
! | GAAAAGTAAACTATCACATT+TGG | - | chr7_3:85733565-85733584 | None:intergenic | 25.0% |
! | ATATTTCTTGTAGGCAAATA+TGG | - | chr7_3:85733643-85733662 | None:intergenic | 25.0% |
!! | AGGAAAAGTTCTTTATTTGA+GGG | - | chr7_3:85733686-85733705 | None:intergenic | 25.0% |
!! | CTTCAAACATTATTTTCACT+GGG | - | chr7_3:85733762-85733781 | None:intergenic | 25.0% |
! | ATGAAAGATGAACAATTTGA+AGG | + | chr7_3:85733798-85733817 | Msa1132890:intron | 25.0% |
!!! | TTTTTTATGGGGTTAATGTT+CGG | - | chr7_3:85733870-85733889 | None:intergenic | 25.0% |
!!! | ACCTTTTTTTATCAACATTG+TGG | + | chr7_3:85734259-85734278 | Msa1132890:intron | 25.0% |
!! | ACCACAATGTTGATAAAAAA+AGG | - | chr7_3:85734263-85734282 | None:intergenic | 25.0% |
! | CATCAGAATAAATAGTACTA+AGG | - | chr7_3:85734289-85734308 | None:intergenic | 25.0% |
!! | AAATTCTGGGAAATGAAAAT+TGG | + | chr7_3:85734430-85734449 | Msa1132890:CDS | 25.0% |
! | AATATACTGATATCATGAGA+TGG | - | chr7_3:85734489-85734508 | None:intergenic | 25.0% |
!! | AATAGTGTTATTAATCGATG+TGG | + | chr7_3:85734597-85734616 | Msa1132890:intron | 25.0% |
!! | ATACTAAATTGATTGGTTGA+TGG | + | chr7_3:85734701-85734720 | Msa1132890:intron | 25.0% |
!! | TACTAAATTGATTGGTTGAT+GGG | + | chr7_3:85734702-85734721 | Msa1132890:intron | 25.0% |
! | CCAAAAAATGTTTCAAGATA+TGG | - | chr7_3:85734830-85734849 | None:intergenic | 25.0% |
!!! | CCATATCTTGAAACATTTTT+TGG | + | chr7_3:85734827-85734846 | Msa1132890:intron | 25.0% |
!! | TGGTGGATCTAAAATTTAAA+TGG | - | chr7_3:85735101-85735120 | None:intergenic | 25.0% |
!!! | TTAATGGAGTTTTTTGTTGA+TGG | + | chr7_3:85735481-85735500 | Msa1132890:intron | 25.0% |
!!! | TTTTTTCCATTTCTGAGTAT+TGG | - | chr7_3:85735534-85735553 | None:intergenic | 25.0% |
! | GAAAATAAAACAAGCTAACT+TGG | + | chr7_3:85735573-85735592 | Msa1132890:intron | 25.0% |
! | CAAGATTAAATACTTAACTC+GGG | + | chr7_3:85736026-85736045 | Msa1132890:intron | 25.0% |
!! | GTCATTTCAAATTTCTTTTG+AGG | + | chr7_3:85736048-85736067 | Msa1132890:intron | 25.0% |
! | TGTTATTGTACTTCTTCTAT+AGG | + | chr7_3:85736107-85736126 | Msa1132890:intron | 25.0% |
! | TTAATCAAGACATGAAACAA+AGG | - | chr7_3:85736206-85736225 | None:intergenic | 25.0% |
!! | TCTTGATTAAAAGCTTTTCA+AGG | + | chr7_3:85736216-85736235 | Msa1132890:intron | 25.0% |
!! | CTTGATTAAAAGCTTTTCAA+GGG | + | chr7_3:85736217-85736236 | Msa1132890:intron | 25.0% |
! | AAAAAATGCATTTCTGTTTC+TGG | + | chr7_3:85736619-85736638 | Msa1132890:intron | 25.0% |
! | CTATCTTCATATAGTTCAAT+TGG | - | chr7_3:85736677-85736696 | None:intergenic | 25.0% |
! | CTATAATGTTATTCGTTACA+TGG | + | chr7_3:85736942-85736961 | Msa1132890:three_prime_UTR | 25.0% |
! | AGGGTAATTTTGTCATCTAT+GGG | - | chr7_3:85730569-85730588 | None:intergenic | 30.0% |
! | AAGGGTAATTTTGTCATCTA+TGG | - | chr7_3:85730570-85730589 | None:intergenic | 30.0% |
! | TGTGGAGAGAAAAAAAGTTT+TGG | - | chr7_3:85730668-85730687 | None:intergenic | 30.0% |
TATACAATTGTTGTGTGTTC+TGG | + | chr7_3:85730826-85730845 | Msa1132890:intron | 30.0% | |
ATACAATTGTTGTGTGTTCT+GGG | + | chr7_3:85730827-85730846 | Msa1132890:intron | 30.0% | |
ATAAGCTTCAACAACGTTAA+TGG | - | chr7_3:85731003-85731022 | None:intergenic | 30.0% | |
TACTGTTGTGAGAAGAAATT+TGG | - | chr7_3:85731232-85731251 | None:intergenic | 30.0% | |
!!! | CCTAGTTTTTTTTTTTTGGG+GGG | + | chr7_3:85731272-85731291 | Msa1132890:intron | 30.0% |
!!! | CTAGTTTTTTTTTTTTGGGG+GGG | + | chr7_3:85731273-85731292 | Msa1132890:intron | 30.0% |
!!! | TAGTTTTTTTTTTTTGGGGG+GGG | + | chr7_3:85731274-85731293 | Msa1132890:intron | 30.0% |
ATAAATAGCCTCCTTACTAT+CGG | - | chr7_3:85731600-85731619 | None:intergenic | 30.0% | |
TATATTGCTTTGTCTTGAGA+AGG | + | chr7_3:85731679-85731698 | Msa1132890:CDS | 30.0% | |
AAACCGAGTCATAAATCATA+CGG | - | chr7_3:85731958-85731977 | None:intergenic | 30.0% | |
TGGGATATCCATTCATAAAT+CGG | - | chr7_3:85731981-85732000 | None:intergenic | 30.0% | |
ACTGTAAGTGAGATTTGAAA+CGG | + | chr7_3:85732065-85732084 | Msa1132890:intron | 30.0% | |
TGTAAAAGAAAAAAACCCTC+AGG | - | chr7_3:85732095-85732114 | None:intergenic | 30.0% | |
ATGATCAACCATAACCAAAT+TGG | - | chr7_3:85732197-85732216 | None:intergenic | 30.0% | |
TCAAAAACACGATAAGTCTA+TGG | - | chr7_3:85732320-85732339 | None:intergenic | 30.0% | |
! | GCACATTCAAACTATTTTCA+TGG | - | chr7_3:85732503-85732522 | None:intergenic | 30.0% |
GAGAAAAATAAACCAGAGAT+TGG | + | chr7_3:85732524-85732543 | Msa1132890:intron | 30.0% | |
ACAAAAGTTAAGTAGGGAAA+TGG | - | chr7_3:85732608-85732627 | None:intergenic | 30.0% | |
!!! | CTCACATTTACCTGTTTTTT+GGG | + | chr7_3:85732761-85732780 | Msa1132890:intron | 30.0% |
TCTGCAATAGTTAATCATTG+TGG | + | chr7_3:85732816-85732835 | Msa1132890:intron | 30.0% | |
CAATCTTTCTATAACGATAG+AGG | - | chr7_3:85732976-85732995 | None:intergenic | 30.0% | |
CTCTATCGTTATAGAAAGAT+TGG | + | chr7_3:85732974-85732993 | Msa1132890:intron | 30.0% | |
! | TGAGGCATTTACAGATAAAA+AGG | - | chr7_3:85733160-85733179 | None:intergenic | 30.0% |
AGATAATTCTTGCAGGTAAA+TGG | - | chr7_3:85733211-85733230 | None:intergenic | 30.0% | |
TCATGAATGAAAACAAGTGA+TGG | + | chr7_3:85733398-85733417 | Msa1132890:intron | 30.0% | |
!!! | TGTCAAGGTGAGTTTTATTT+GGG | - | chr7_3:85733540-85733559 | None:intergenic | 30.0% |
! | GAGGAAAAGTTCTTTATTTG+AGG | - | chr7_3:85733687-85733706 | None:intergenic | 30.0% |
!! | ATCAAAGAGCCATTTTCTTT+CGG | - | chr7_3:85733715-85733734 | None:intergenic | 30.0% |
CTTAACTCAAATTGTCAACA+TGG | - | chr7_3:85733739-85733758 | None:intergenic | 30.0% | |
! | CCTTCAAACATTATTTTCAC+TGG | - | chr7_3:85733763-85733782 | None:intergenic | 30.0% |
CCAGTGAAAATAATGTTTGA+AGG | + | chr7_3:85733760-85733779 | Msa1132890:intron | 30.0% | |
! | ATACCTATAAATTGGCTTAC+AGG | + | chr7_3:85733843-85733862 | Msa1132890:intron | 30.0% |
GTCAACTGAAATTTCTTTCT+GGG | - | chr7_3:85734241-85734260 | None:intergenic | 30.0% | |
ATGCTTTAATATCTTGTCCA+AGG | + | chr7_3:85734306-85734325 | Msa1132890:intron | 30.0% | |
TCTTGTCCAAGGTAATTAAA+TGG | + | chr7_3:85734317-85734336 | Msa1132890:intron | 30.0% | |
TTAGATATGGATCATAGAGT+TGG | + | chr7_3:85734397-85734416 | Msa1132890:CDS | 30.0% | |
!! | AGGCTTTATTCTACTAAATG+AGG | - | chr7_3:85734634-85734653 | None:intergenic | 30.0% |
TCATTTAGTAGAATAAAGCC+TGG | + | chr7_3:85734633-85734652 | Msa1132890:intron | 30.0% | |
! | ACAACAAATTTGAAGTTGAG+TGG | - | chr7_3:85735004-85735023 | None:intergenic | 30.0% |
AAATTTAAATGGCCATGATG+TGG | - | chr7_3:85735090-85735109 | None:intergenic | 30.0% | |
!!! | TTTTGTTGATGGTGTTTTAG+TGG | + | chr7_3:85735492-85735511 | Msa1132890:intron | 30.0% |
!!! | TTTGTTGATGGTGTTTTAGT+GGG | + | chr7_3:85735493-85735512 | Msa1132890:intron | 30.0% |
! | CTAAACCTTAACTTGATAAC+CGG | - | chr7_3:85735603-85735622 | None:intergenic | 30.0% |
TTAGAATTATATGGATGACG+TGG | + | chr7_3:85735619-85735638 | Msa1132890:intron | 30.0% | |
TACCAGTAACTATGTTTGAA+GGG | - | chr7_3:85735805-85735824 | None:intergenic | 30.0% | |
ATACCAGTAACTATGTTTGA+AGG | - | chr7_3:85735806-85735825 | None:intergenic | 30.0% | |
! | GACAGTATTCATTGATTATG+TGG | - | chr7_3:85735916-85735935 | None:intergenic | 30.0% |
TTGAATATGAACAATGTCAG+TGG | + | chr7_3:85735945-85735964 | Msa1132890:intron | 30.0% | |
!! | ACTTTGTTGATGGCTATATA+CGG | + | chr7_3:85736154-85736173 | Msa1132890:intron | 30.0% |
TGAATGATTAATTTATCCCG+AGG | - | chr7_3:85736265-85736284 | None:intergenic | 30.0% | |
TGAAGAGAAAGATAGAGTAA+TGG | + | chr7_3:85736321-85736340 | Msa1132890:CDS | 30.0% | |
TCAAGTGCTAAAAAGAAGAA+AGG | + | chr7_3:85736406-85736425 | Msa1132890:CDS | 30.0% | |
CAAGTGCTAAAAAGAAGAAA+GGG | + | chr7_3:85736407-85736426 | Msa1132890:CDS | 30.0% | |
CTATATGAAGATAGAACTTG+AGG | + | chr7_3:85736683-85736702 | Msa1132890:intron | 30.0% | |
!! | AAACCATTTTTATCCAAGCT+TGG | + | chr7_3:85736824-85736843 | Msa1132890:three_prime_UTR | 30.0% |
TATGAGTCTAATGAGTTGTA+TGG | + | chr7_3:85736916-85736935 | Msa1132890:three_prime_UTR | 30.0% | |
! | GGGTAATTTTGTCATCTATG+GGG | - | chr7_3:85730568-85730587 | None:intergenic | 35.0% |
! | GAACGATTGAAAGGGTTTTT+AGG | - | chr7_3:85730618-85730637 | None:intergenic | 35.0% |
TCTCTTGAGAACGATTGAAA+GGG | - | chr7_3:85730626-85730645 | None:intergenic | 35.0% | |
TTCTCTTGAGAACGATTGAA+AGG | - | chr7_3:85730627-85730646 | None:intergenic | 35.0% | |
!!! | AGTTTTGGAAGAAGAGAGAA+GGG | - | chr7_3:85730653-85730672 | None:intergenic | 35.0% |
!!! | AAGTTTTGGAAGAAGAGAGA+AGG | - | chr7_3:85730654-85730673 | None:intergenic | 35.0% |
CTTCGAAATCTTGCTAGAAA+AGG | - | chr7_3:85730709-85730728 | None:intergenic | 35.0% | |
CAAAACAATCAACAACCATG+TGG | + | chr7_3:85730930-85730949 | Msa1132890:exon | 35.0% | |
! | GATTTTGTCTGCGAATATGA+TGG | - | chr7_3:85731126-85731145 | None:intergenic | 35.0% |
TTCTCCCCAATATAATGCTT+TGG | - | chr7_3:85731189-85731208 | None:intergenic | 35.0% | |
CCCCCCAAAAAAAAAAAACT+AGG | - | chr7_3:85731275-85731294 | None:intergenic | 35.0% | |
!!! | AGTTTTTTTTTTTTGGGGGG+GGG | + | chr7_3:85731275-85731294 | Msa1132890:intron | 35.0% |
ATAGTTTGAGTATGGTGACA+GGG | + | chr7_3:85731512-85731531 | Msa1132890:intron | 35.0% | |
!!! | TGACAGGGGTTTCAATTTTT+TGG | + | chr7_3:85731527-85731546 | Msa1132890:intron | 35.0% |
TATGGATGATACCGATAGTA+AGG | + | chr7_3:85731586-85731605 | Msa1132890:CDS | 35.0% | |
GATAGTAAGGAGGCTATTTA+TGG | + | chr7_3:85731599-85731618 | Msa1132890:CDS | 35.0% | |
! | TGGGAGCAAAATTTTCCAAT+TGG | + | chr7_3:85731644-85731663 | Msa1132890:CDS | 35.0% |
ATAAAGCTTGTCAGATGAAG+AGG | + | chr7_3:85731790-85731809 | Msa1132890:intron | 35.0% | |
ATGCCGTATGATTTATGACT+CGG | + | chr7_3:85731952-85731971 | Msa1132890:intron | 35.0% | |
TATCCCATCAAACAACAGAT+TGG | + | chr7_3:85731994-85732013 | Msa1132890:intron | 35.0% | |
! | CAACCAATCTGTTGTTTGAT+GGG | - | chr7_3:85732000-85732019 | None:intergenic | 35.0% |
! | CTGTAAGTGAGATTTGAAAC+GGG | + | chr7_3:85732066-85732085 | Msa1132890:intron | 35.0% |
AGAAATGCAAGAATCCTGTA+CGG | - | chr7_3:85732265-85732284 | None:intergenic | 35.0% | |
!! | TTTACAGTTCTAGAGCCTTT+AGG | - | chr7_3:85732367-85732386 | None:intergenic | 35.0% |
TCACATGTTAAGTCGATTGA+TGG | - | chr7_3:85732455-85732474 | None:intergenic | 35.0% | |
AATACTTGGCTCATCAACAA+TGG | - | chr7_3:85732692-85732711 | None:intergenic | 35.0% | |
!!! | GCTCACATTTACCTGTTTTT+TGG | + | chr7_3:85732760-85732779 | Msa1132890:intron | 35.0% |
TCAACAACAACCCAAAAAAC+AGG | - | chr7_3:85732774-85732793 | None:intergenic | 35.0% | |
!! | CTGTCTTGTTATTTGTTCGT+TGG | + | chr7_3:85732900-85732919 | Msa1132890:intron | 35.0% |
GTTATTTGTTCGTTGGCAAT+AGG | + | chr7_3:85732907-85732926 | Msa1132890:intron | 35.0% | |
GATGAAGGTTCTTCAAGAAA+GGG | - | chr7_3:85732950-85732969 | None:intergenic | 35.0% | |
AGATGAAGGTTCTTCAAGAA+AGG | - | chr7_3:85732951-85732970 | None:intergenic | 35.0% | |
TTTCAAGCAAAAACAAGGGA+AGG | - | chr7_3:85733013-85733032 | None:intergenic | 35.0% | |
!!! | TTCCCTTGTTTTTGCTTGAA+AGG | + | chr7_3:85733012-85733031 | Msa1132890:intron | 35.0% |
TGCCTTTCAAGCAAAAACAA+GGG | - | chr7_3:85733017-85733036 | None:intergenic | 35.0% | |
! | TGAGACTTTGCAAACTTTTG+AGG | + | chr7_3:85733108-85733127 | Msa1132890:intron | 35.0% |
AAAGGTTGTAGCAAAGATCA+TGG | - | chr7_3:85733142-85733161 | None:intergenic | 35.0% | |
GTAAATCAAATGTGGCATCT+TGG | - | chr7_3:85733183-85733202 | None:intergenic | 35.0% | |
CTGTCAAAGATAATTCTTGC+AGG | - | chr7_3:85733218-85733237 | None:intergenic | 35.0% | |
GTAACATGGTTAGATCTGTT+AGG | - | chr7_3:85733293-85733312 | None:intergenic | 35.0% | |
ACTGTCCAAGATGAATTTGA+GGG | - | chr7_3:85733318-85733337 | None:intergenic | 35.0% | |
!!! | GTCAAGGTGAGTTTTATTTG+GGG | - | chr7_3:85733539-85733558 | None:intergenic | 35.0% |
!!! | CTGTCAAGGTGAGTTTTATT+TGG | - | chr7_3:85733541-85733560 | None:intergenic | 35.0% |
TTCTTCATCTGCAATCACAA+TGG | - | chr7_3:85733596-85733615 | None:intergenic | 35.0% | |
GATTGCAGATGAAGAATTGT+TGG | + | chr7_3:85733600-85733619 | Msa1132890:intron | 35.0% | |
GAGGTTGAGATATTTCTTGT+AGG | - | chr7_3:85733652-85733671 | None:intergenic | 35.0% | |
!! | TCAAAGAGCCATTTTCTTTC+GGG | - | chr7_3:85733714-85733733 | None:intergenic | 35.0% |
CTAAACAGCATCTGTGTATT+TGG | + | chr7_3:85733893-85733912 | Msa1132890:intron | 35.0% | |
GGTCAACTGAAATTTCTTTC+TGG | - | chr7_3:85734242-85734261 | None:intergenic | 35.0% | |
CAGCATCCATTTAATTACCT+TGG | - | chr7_3:85734326-85734345 | None:intergenic | 35.0% | |
AATTAAATGGATGCTGAGCA+AGG | + | chr7_3:85734330-85734349 | Msa1132890:CDS | 35.0% | |
ATTAAATGGATGCTGAGCAA+GGG | + | chr7_3:85734331-85734350 | Msa1132890:CDS | 35.0% | |
CTTGCAACAACATAATAACC+AGG | - | chr7_3:85734654-85734673 | None:intergenic | 35.0% | |
!! | TAAGAGGTGGTGTTTTGTTA+AGG | - | chr7_3:85735043-85735062 | None:intergenic | 35.0% |
!!! | GTTTTTTTGCTTGTACTTGG+TGG | - | chr7_3:85735118-85735137 | None:intergenic | 35.0% |
!!! | GGTGTTTTTTTGCTTGTACT+TGG | - | chr7_3:85735121-85735140 | None:intergenic | 35.0% |
TACAAGCAAAAAAACACCCA+TGG | + | chr7_3:85735123-85735142 | Msa1132890:intron | 35.0% | |
GATTGAAAAGAGAGAACCAT+GGG | - | chr7_3:85735142-85735161 | None:intergenic | 35.0% | |
TGATTGAAAAGAGAGAACCA+TGG | - | chr7_3:85735143-85735162 | None:intergenic | 35.0% | |
GACAATGCATAACATATGCA+AGG | + | chr7_3:85735204-85735223 | Msa1132890:intron | 35.0% | |
!!! | ATTTTTTTTTGGTGGTGTCC+GGG | - | chr7_3:85735244-85735263 | None:intergenic | 35.0% |
!!! | GATTTTTTTTTGGTGGTGTC+CGG | - | chr7_3:85735245-85735264 | None:intergenic | 35.0% |
TTTGTGAGATAAAAGTCGGA+TGG | - | chr7_3:85735336-85735355 | None:intergenic | 35.0% | |
! | GTGGTTTGTGAGATAAAAGT+CGG | - | chr7_3:85735340-85735359 | None:intergenic | 35.0% |
AAAGGGAAATACACTATCAG+TGG | + | chr7_3:85735398-85735417 | Msa1132890:intron | 35.0% | |
CAGTAACCAATACTCAGAAA+TGG | + | chr7_3:85735525-85735544 | Msa1132890:intron | 35.0% | |
AACAAGCTAACTTGGAAAAC+CGG | + | chr7_3:85735581-85735600 | Msa1132890:intron | 35.0% | |
GAAAACCGGTTATCAAGTTA+AGG | + | chr7_3:85735595-85735614 | Msa1132890:intron | 35.0% | |
AACGCTTTAACACACTCTAT+TGG | - | chr7_3:85735665-85735684 | None:intergenic | 35.0% | |
!!! | GTTTAGCGCTGATGAATTTT+TGG | + | chr7_3:85735982-85736001 | Msa1132890:intron | 35.0% |
!! | TTAAAAGCTTTTCAAGGGAC+TGG | + | chr7_3:85736222-85736241 | Msa1132890:intron | 35.0% |
! | AAGCTTTTGATCGTAAACCT+CGG | + | chr7_3:85736245-85736264 | Msa1132890:CDS | 35.0% |
GCAAATGCATATGAGATGTT+AGG | + | chr7_3:85736292-85736311 | Msa1132890:CDS | 35.0% | |
TCATCTCTTCACTATCAAAG+AGG | + | chr7_3:85736354-85736373 | Msa1132890:CDS | 35.0% | |
AGAGTCCTTTCTAGATTCAT+CGG | - | chr7_3:85736437-85736456 | None:intergenic | 35.0% | |
TCAACAGCATCAACCAAATT+TGG | + | chr7_3:85736787-85736806 | Msa1132890:three_prime_UTR | 35.0% | |
CAACAGCATCAACCAAATTT+GGG | + | chr7_3:85736788-85736807 | Msa1132890:three_prime_UTR | 35.0% | |
AACTACACTCTTCCCAAATT+TGG | - | chr7_3:85736803-85736822 | None:intergenic | 35.0% | |
ACTCCAAGCTTGGATAAAAA+TGG | - | chr7_3:85736830-85736849 | None:intergenic | 35.0% | |
TCTAGCAAGATTTCGAAGCA+AGG | + | chr7_3:85730711-85730730 | Msa1132890:five_prime_UTR | 40.0% | |
TGTCTGCGAATATGATGGTT+GGG | - | chr7_3:85731121-85731140 | None:intergenic | 40.0% | |
TTGTCTGCGAATATGATGGT+TGG | - | chr7_3:85731122-85731141 | None:intergenic | 40.0% | |
!! | CTACTAGCTTTCTGTTCAGA+AGG | - | chr7_3:85731159-85731178 | None:intergenic | 40.0% |
!!! | GTTTTTTTTTTTTGGGGGGG+GGG | + | chr7_3:85731276-85731295 | Msa1132890:intron | 40.0% |
!!! | TTTTTTTTTTTTGGGGGGGG+GGG | + | chr7_3:85731277-85731296 | Msa1132890:intron | 40.0% |
GATAGTTTGAGTATGGTGAC+AGG | + | chr7_3:85731511-85731530 | Msa1132890:intron | 40.0% | |
TAGTTTGAGTATGGTGACAG+GGG | + | chr7_3:85731513-85731532 | Msa1132890:intron | 40.0% | |
ATCACGAAGCTGCATCATTA+GGG | - | chr7_3:85731567-85731586 | None:intergenic | 40.0% | |
TATCACGAAGCTGCATCATT+AGG | - | chr7_3:85731568-85731587 | None:intergenic | 40.0% | |
AATGATGCAGCTTCGTGATA+TGG | + | chr7_3:85731568-85731587 | Msa1132890:intron | 40.0% | |
TTTATGGTGCTCTTGATGCA+TGG | + | chr7_3:85731615-85731634 | Msa1132890:CDS | 40.0% | |
TTATGGTGCTCTTGATGCAT+GGG | + | chr7_3:85731616-85731635 | Msa1132890:CDS | 40.0% | |
!! | TTTTGGGAGATCTCATCACT+GGG | - | chr7_3:85731923-85731942 | None:intergenic | 40.0% |
GAGATCTCCCAAAACTTGAT+TGG | + | chr7_3:85731929-85731948 | Msa1132890:intron | 40.0% | |
! | ACGGCATCCAATCAAGTTTT+GGG | - | chr7_3:85731939-85731958 | None:intergenic | 40.0% |
! | TACGGCATCCAATCAAGTTT+TGG | - | chr7_3:85731940-85731959 | None:intergenic | 40.0% |
CTCGGTTTCCGATTTATGAA+TGG | + | chr7_3:85731970-85731989 | Msa1132890:intron | 40.0% | |
! | GCAACCAATCTGTTGTTTGA+TGG | - | chr7_3:85732001-85732020 | None:intergenic | 40.0% |
! | CGGATAGATTTCCTCTGTTT+TGG | + | chr7_3:85732041-85732060 | Msa1132890:intron | 40.0% |
CACTTACAGTTCCAAAACAG+AGG | - | chr7_3:85732055-85732074 | None:intergenic | 40.0% | |
TTGATCATACATGCTGAGAG+TGG | + | chr7_3:85732209-85732228 | Msa1132890:intron | 40.0% | |
TGATCATACATGCTGAGAGT+GGG | + | chr7_3:85732210-85732229 | Msa1132890:intron | 40.0% | |
ATTGGACAGTTTGATGGAAG+AGG | + | chr7_3:85732542-85732561 | Msa1132890:intron | 40.0% | |
TTCGTTGGCAATAGGAACAA+GGG | + | chr7_3:85732915-85732934 | Msa1132890:intron | 40.0% | |
TAACGATAGAGGGAAGATGA+AGG | - | chr7_3:85732965-85732984 | None:intergenic | 40.0% | |
GTGCCTTTCAAGCAAAAACA+AGG | - | chr7_3:85733018-85733037 | None:intergenic | 40.0% | |
TGGAAGCGGTAAATCAAATG+TGG | - | chr7_3:85733191-85733210 | None:intergenic | 40.0% | |
TTCTTGCAGGTAAATGGAAG+CGG | - | chr7_3:85733205-85733224 | None:intergenic | 40.0% | |
CAATTTCTCTCTGCAATGTG+AGG | + | chr7_3:85733265-85733284 | Msa1132890:intron | 40.0% | |
TGAATTTGAGGGCAGTAACA+TGG | - | chr7_3:85733307-85733326 | None:intergenic | 40.0% | |
TACTGCCCTCAAATTCATCT+TGG | + | chr7_3:85733310-85733329 | Msa1132890:intron | 40.0% | |
CACTGTCCAAGATGAATTTG+AGG | - | chr7_3:85733319-85733338 | None:intergenic | 40.0% | |
GGAAACAGCTAAACAGGTAT+TGG | - | chr7_3:85733343-85733362 | None:intergenic | 40.0% | |
ACGTTTGGATTCTCTCTCAA+TGG | + | chr7_3:85733468-85733487 | Msa1132890:intron | 40.0% | |
TTTGGATTCTCTCTCAATGG+CGG | + | chr7_3:85733471-85733490 | Msa1132890:intron | 40.0% | |
! | ATTTGGGGTCTCAAGCTTTA+TGG | - | chr7_3:85733524-85733543 | None:intergenic | 40.0% |
GGTCCTGTAAGCCAATTTAT+AGG | - | chr7_3:85733849-85733868 | None:intergenic | 40.0% | |
AAGAATTGCACATCTGCAAC+AGG | + | chr7_3:85733940-85733959 | Msa1132890:intron | 40.0% | |
TTAAATGGATGCTGAGCAAG+GGG | + | chr7_3:85734332-85734351 | Msa1132890:CDS | 40.0% | |
!! | ACTGATTCGAGCGTTAGATA+TGG | + | chr7_3:85734384-85734403 | Msa1132890:CDS | 40.0% |
! | TTGGAGAAGCACACAAATTC+TGG | + | chr7_3:85734416-85734435 | Msa1132890:CDS | 40.0% |
! | TGGAGAAGCACACAAATTCT+GGG | + | chr7_3:85734417-85734436 | Msa1132890:CDS | 40.0% |
! | CTGATTTGCATTCTGTTCCT+TGG | + | chr7_3:85734455-85734474 | Msa1132890:CDS | 40.0% |
GGGTAAGCTTTCCCAAATAA+TGG | + | chr7_3:85734539-85734558 | Msa1132890:intron | 40.0% | |
AACGCTTTAACACACTCCAT+TGG | + | chr7_3:85734775-85734794 | Msa1132890:intron | 40.0% | |
! | ATTAGAGAGAGTGTGACCAA+TGG | - | chr7_3:85734794-85734813 | None:intergenic | 40.0% |
TTGGTCACACTCTCTCTAAT+TGG | + | chr7_3:85734794-85734813 | Msa1132890:intron | 40.0% | |
GTTTCAAGATATGGATGACG+TGG | - | chr7_3:85734821-85734840 | None:intergenic | 40.0% | |
! | TTTTGGCCTACCACTTATTC+AGG | + | chr7_3:85734844-85734863 | Msa1132890:intron | 40.0% |
CAGTAACCTGAATAAGTGGT+AGG | - | chr7_3:85734853-85734872 | None:intergenic | 40.0% | |
GATGCAGTAACCTGAATAAG+TGG | - | chr7_3:85734857-85734876 | None:intergenic | 40.0% | |
TATCAATTGCTTCCCTATGC+TGG | - | chr7_3:85734916-85734935 | None:intergenic | 40.0% | |
ATTAAGGTTGGATGAAGGGA+TGG | - | chr7_3:85734965-85734984 | None:intergenic | 40.0% | |
! | GTGGATTAAGGTTGGATGAA+GGG | - | chr7_3:85734969-85734988 | None:intergenic | 40.0% |
!! | TTGTTGATGGAGGTGGATTA+AGG | - | chr7_3:85734981-85735000 | None:intergenic | 40.0% |
TGAAGTTGAGTGGTTGTTGA+TGG | - | chr7_3:85734994-85735013 | None:intergenic | 40.0% | |
!! | GTTTATGGTGGATTAAGAGG+TGG | - | chr7_3:85735056-85735075 | None:intergenic | 40.0% |
!! | ACGGTTTATGGTGGATTAAG+AGG | - | chr7_3:85735059-85735078 | None:intergenic | 40.0% |
TGCATAACATATGCAAGGTC+CGG | + | chr7_3:85735209-85735228 | Msa1132890:intron | 40.0% | |
!!! | TTTTTTTTTGGTGGTGTCCG+GGG | - | chr7_3:85735243-85735262 | None:intergenic | 40.0% |
CGAACCTAAATGACATTCTC+CGG | - | chr7_3:85735309-85735328 | None:intergenic | 40.0% | |
! | CGGAGAATGTCATTTAGGTT+CGG | + | chr7_3:85735307-85735326 | Msa1132890:intron | 40.0% |
! | GGAGAATGTCATTTAGGTTC+GGG | + | chr7_3:85735308-85735327 | Msa1132890:intron | 40.0% |
TCACAAACCACCATACTTGA+CGG | + | chr7_3:85735349-85735368 | Msa1132890:intron | 40.0% | |
TGGACCAATTAGAGAAAGAG+TGG | + | chr7_3:85735639-85735658 | Msa1132890:intron | 40.0% | |
TTGGCCACTCTTTCTCTAAT+TGG | - | chr7_3:85735646-85735665 | None:intergenic | 40.0% | |
GTCCCTTCAAACATAGTTAC+TGG | + | chr7_3:85735800-85735819 | Msa1132890:intron | 40.0% | |
CCATCAACAAAGTGTAAGAG+AGG | - | chr7_3:85736147-85736166 | None:intergenic | 40.0% | |
CCTCTCTTACACTTTGTTGA+TGG | + | chr7_3:85736144-85736163 | Msa1132890:intron | 40.0% | |
! | AGCTTTTGATCGTAAACCTC+GGG | + | chr7_3:85736246-85736265 | Msa1132890:CDS | 40.0% |
GAGTCCTTTCTAGATTCATC+GGG | - | chr7_3:85736436-85736455 | None:intergenic | 40.0% | |
TGAATCTAGAAAGGACTCTG+CGG | + | chr7_3:85736438-85736457 | Msa1132890:CDS | 40.0% | |
! | TTTTGCTTCTACTCCAAGCT+TGG | - | chr7_3:85736840-85736859 | None:intergenic | 40.0% |
CTGATCAAGTCTTCAATGTG+TGG | + | chr7_3:85736892-85736911 | Msa1132890:three_prime_UTR | 40.0% | |
!!! | TTTAGCGTCGAGATTGGTTT+TGG | - | chr7_3:85737097-85737116 | None:intergenic | 40.0% |
! | ACAAGATTTAGCGTCGAGAT+TGG | - | chr7_3:85737103-85737122 | None:intergenic | 40.0% |
TAGTCACACCCCTGTAATAC+TGG | + | chr7_3:85730537-85730556 | Msa1132890:five_prime_UTR | 45.0% | |
GGGTGTAACCAGTATTACAG+GGG | - | chr7_3:85730548-85730567 | None:intergenic | 45.0% | |
GGGGTGTAACCAGTATTACA+GGG | - | chr7_3:85730549-85730568 | None:intergenic | 45.0% | |
TGGGGTGTAACCAGTATTAC+AGG | - | chr7_3:85730550-85730569 | None:intergenic | 45.0% | |
TTCTCTCCACATTTCACAGC+AGG | + | chr7_3:85730677-85730696 | Msa1132890:five_prime_UTR | 45.0% | |
ATCGATCCTGCTGTGAAATG+TGG | - | chr7_3:85730686-85730705 | None:intergenic | 45.0% | |
AAATCGAGACGATCTCCACA+TGG | - | chr7_3:85730948-85730967 | None:intergenic | 45.0% | |
!!! | TTTTTTTTTTTGGGGGGGGG+GGG | + | chr7_3:85731278-85731297 | Msa1132890:intron | 45.0% |
AATCCTTGGACCAAATACCG+AGG | - | chr7_3:85731318-85731337 | None:intergenic | 45.0% | |
TCCAAGGATTCACTAATCCG+AGG | + | chr7_3:85731328-85731347 | Msa1132890:intron | 45.0% | |
!! | TCCTCGGATTAGTGAATCCT+TGG | - | chr7_3:85731332-85731351 | None:intergenic | 45.0% |
TTCAATTGAGCTCCCGCTAT+GGG | - | chr7_3:85731360-85731379 | None:intergenic | 45.0% | |
AGCGAGAGCAAAGTTCTGTA+TGG | + | chr7_3:85731379-85731398 | Msa1132890:intron | 45.0% | |
! | CTAGGAGTGTGTTACTCACT+AGG | - | chr7_3:85731427-85731446 | None:intergenic | 45.0% |
CTAGTGAGTAACACACTCCT+AGG | + | chr7_3:85731425-85731444 | Msa1132890:intron | 45.0% | |
GGATGATACCGATAGTAAGG+AGG | + | chr7_3:85731589-85731608 | Msa1132890:CDS | 45.0% | |
! | TCTTGATGCATGGGTTGCTT+GGG | + | chr7_3:85731625-85731644 | Msa1132890:CDS | 45.0% |
GTCTTGAGAAGGAACAACAG+TGG | + | chr7_3:85731690-85731709 | Msa1132890:CDS | 45.0% | |
AGAAGGAACAACAGTGGCAT+AGG | + | chr7_3:85731696-85731715 | Msa1132890:CDS | 45.0% | |
ACAGTGGCATAGGATTGTTC+AGG | + | chr7_3:85731706-85731725 | Msa1132890:CDS | 45.0% | |
!!! | GTTTTGGGAGATCTCATCAC+TGG | - | chr7_3:85731924-85731943 | None:intergenic | 45.0% |
! | ATTTGAAACGGGTCTCCTGA+GGG | + | chr7_3:85732077-85732096 | Msa1132890:intron | 45.0% |
CCATCAAACTGTCCAATCTC+TGG | - | chr7_3:85732539-85732558 | None:intergenic | 45.0% | |
CCAGAGATTGGACAGTTTGA+TGG | + | chr7_3:85732536-85732555 | Msa1132890:intron | 45.0% | |
GGAGAAGTTATGCAAGCCAA+AGG | - | chr7_3:85732587-85732606 | None:intergenic | 45.0% | |
GTTCGTTGGCAATAGGAACA+AGG | + | chr7_3:85732914-85732933 | Msa1132890:intron | 45.0% | |
GCTTCATGCATGAGAGCAAA+GGG | - | chr7_3:85733071-85733090 | None:intergenic | 45.0% | |
AGCTTCATGCATGAGAGCAA+AGG | - | chr7_3:85733072-85733091 | None:intergenic | 45.0% | |
TCAAATGTGGCATCTTGGTG+AGG | - | chr7_3:85733178-85733197 | None:intergenic | 45.0% | |
GGACTTGGAAACAGCTAAAC+AGG | - | chr7_3:85733349-85733368 | None:intergenic | 45.0% | |
CTATCACATTTGGGCTGTCA+AGG | - | chr7_3:85733555-85733574 | None:intergenic | 45.0% | |
TTTGAGGGCTAAACACAGTG+AGG | - | chr7_3:85733671-85733690 | None:intergenic | 45.0% | |
! | CCATTTTCTTTCGGGATGTG+AGG | - | chr7_3:85733706-85733725 | None:intergenic | 45.0% |
CCTCACATCCCGAAAGAAAA+TGG | + | chr7_3:85733703-85733722 | Msa1132890:intron | 45.0% | |
TCTTCTACCAAGACCAGCAT+AGG | + | chr7_3:85734900-85734919 | Msa1132890:intron | 45.0% | |
CTTCTACCAAGACCAGCATA+GGG | + | chr7_3:85734901-85734920 | Msa1132890:intron | 45.0% | |
!! | GGTGGATTAAGGTTGGATGA+AGG | - | chr7_3:85734970-85734989 | None:intergenic | 45.0% |
!! | TGATGGAGGTGGATTAAGGT+TGG | - | chr7_3:85734977-85734996 | None:intergenic | 45.0% |
! | AGTTGAGTGGTTGTTGATGG+AGG | - | chr7_3:85734991-85735010 | None:intergenic | 45.0% |
GTTGAACAGACGGTTTATGG+TGG | - | chr7_3:85735068-85735087 | None:intergenic | 45.0% | |
GTGGTTGAACAGACGGTTTA+TGG | - | chr7_3:85735071-85735090 | None:intergenic | 45.0% | |
CCATGATGTGGTTGAACAGA+CGG | - | chr7_3:85735078-85735097 | None:intergenic | 45.0% | |
TACCAACTGAGCTAAGCTCA+CGG | - | chr7_3:85735182-85735201 | None:intergenic | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+AGG | + | chr7_3:85735182-85735201 | Msa1132890:intron | 45.0% |
GCATAACATATGCAAGGTCC+GGG | + | chr7_3:85735210-85735229 | Msa1132890:intron | 45.0% | |
CATAACATATGCAAGGTCCG+GGG | + | chr7_3:85735211-85735230 | Msa1132890:intron | 45.0% | |
! | AACGCCGGAGAATGTCATTT+AGG | + | chr7_3:85735302-85735321 | Msa1132890:intron | 45.0% |
TGACGTTTCTCCGTCAAGTA+TGG | - | chr7_3:85735362-85735381 | None:intergenic | 45.0% | |
TTGACGGAGAAACGTCACAA+GGG | + | chr7_3:85735365-85735384 | Msa1132890:intron | 45.0% | |
ACAAGGGTCACACAACGAAA+GGG | + | chr7_3:85735381-85735400 | Msa1132890:intron | 45.0% | |
GGGAAATACACTATCAGTGG+TGG | + | chr7_3:85735401-85735420 | Msa1132890:intron | 45.0% | |
TGACCCTTCAGATTCTGCAT+CGG | - | chr7_3:85735447-85735466 | None:intergenic | 45.0% | |
ATGCAGAATCTGAAGGGTCA+TGG | + | chr7_3:85735447-85735466 | Msa1132890:intron | 45.0% | |
TTCCTTCCACCTTTCTTGGT+CGG | - | chr7_3:85736385-85736404 | None:intergenic | 45.0% | |
TGACTTCCTTCCACCTTTCT+TGG | - | chr7_3:85736389-85736408 | None:intergenic | 45.0% | |
GAAGCCCGATGAATCTAGAA+AGG | + | chr7_3:85736429-85736448 | Msa1132890:CDS | 45.0% | |
!!! | TTTTTTTTTTGGGGGGGGGG+GGG | + | chr7_3:85731279-85731298 | Msa1132890:intron | 50.0% |
CTTCAATTGAGCTCCCGCTA+TGG | - | chr7_3:85731361-85731380 | None:intergenic | 50.0% | |
CACTAGGTCTCACGTTGTGT+TGG | - | chr7_3:85731411-85731430 | None:intergenic | 50.0% | |
CTTCACCATGCCAACCACTT+GGG | + | chr7_3:85731463-85731482 | Msa1132890:intron | 50.0% | |
TTCACCATGCCAACCACTTG+GGG | + | chr7_3:85731464-85731483 | Msa1132890:intron | 50.0% | |
! | CTCTTGATGCATGGGTTGCT+TGG | + | chr7_3:85731624-85731643 | Msa1132890:CDS | 50.0% |
! | GATTTGAAACGGGTCTCCTG+AGG | + | chr7_3:85732076-85732095 | Msa1132890:intron | 50.0% |
AGTGTTACATGCTGCCGTAC+AGG | + | chr7_3:85732248-85732267 | Msa1132890:intron | 50.0% | |
GGTACGACGATGGGAACATA+CGG | + | chr7_3:85734358-85734377 | Msa1132890:CDS | 50.0% | |
ATGAGATGGCACAACTGCCA+AGG | - | chr7_3:85734475-85734494 | None:intergenic | 50.0% | |
! | TTGCTTCCCTATGCTGGTCT+TGG | - | chr7_3:85734910-85734929 | None:intergenic | 50.0% |
ATGGTCCTGGTGGTTTGAAC+GGG | - | chr7_3:85734946-85734965 | None:intergenic | 50.0% | |
GATGGTCCTGGTGGTTTGAA+CGG | - | chr7_3:85734947-85734966 | None:intergenic | 50.0% | |
! | TGAGTGGTTGTTGATGGAGG+TGG | - | chr7_3:85734988-85735007 | None:intergenic | 50.0% |
CCGTCTGTTCAACCACATCA+TGG | + | chr7_3:85735075-85735094 | Msa1132890:intron | 50.0% | |
ACCAACTGAGCTAAGCTCAC+GGG | - | chr7_3:85735181-85735200 | None:intergenic | 50.0% | |
!! | TTGATGGCGTGCATGTAAGG+CGG | - | chr7_3:85735284-85735303 | None:intergenic | 50.0% |
! | ATGACATTCTCCGGCGTTGA+TGG | - | chr7_3:85735300-85735319 | None:intergenic | 50.0% |
CGTTTCTCCGTCAAGTATGG+TGG | - | chr7_3:85735359-85735378 | None:intergenic | 50.0% | |
CTTGACGGAGAAACGTCACA+AGG | + | chr7_3:85735364-85735383 | Msa1132890:intron | 50.0% | |
CACAAGGGTCACACAACGAA+AGG | + | chr7_3:85735380-85735399 | Msa1132890:intron | 50.0% | |
! | TGCACCGATGCAGAATCTGA+AGG | + | chr7_3:85735440-85735459 | Msa1132890:intron | 50.0% |
! | GCACCGATGCAGAATCTGAA+GGG | + | chr7_3:85735441-85735460 | Msa1132890:intron | 50.0% |
CAGAATCTGAAGGGTCATGG+TGG | + | chr7_3:85735450-85735469 | Msa1132890:intron | 50.0% | |
! | ATCTGAAGGGTCATGGTGGA+CGG | + | chr7_3:85735454-85735473 | Msa1132890:intron | 50.0% |
!! | CATGGTGGACGGTGGTTTAA+TGG | + | chr7_3:85735465-85735484 | Msa1132890:intron | 50.0% |
! | AGCTTTCCATGACTTGCAGC+AGG | + | chr7_3:85736737-85736756 | Msa1132890:intron | 50.0% |
CTACATCCTGCTGCAAGTCA+TGG | - | chr7_3:85736746-85736765 | None:intergenic | 50.0% | |
! | CATGACTTGCAGCAGGATGT+AGG | + | chr7_3:85736744-85736763 | Msa1132890:intron | 50.0% |
AAGCAAAACACCGTGCACCT+GGG | + | chr7_3:85736852-85736871 | Msa1132890:three_prime_UTR | 50.0% | |
CAGTTCAGTACATGTGTCCC+AGG | - | chr7_3:85736872-85736891 | None:intergenic | 50.0% | |
TAGGCAGAGCAGAGAAACTC+TGG | - | chr7_3:85737048-85737067 | None:intergenic | 50.0% | |
!!! | TTTTTTTTTGGGGGGGGGGG+GGG | + | chr7_3:85731280-85731299 | Msa1132890:intron | 55.0% |
TCCGAGGACCAATCCCATAG+CGG | + | chr7_3:85731344-85731363 | Msa1132890:intron | 55.0% | |
TTGAGCTCCCGCTATGGGAT+TGG | - | chr7_3:85731355-85731374 | None:intergenic | 55.0% | |
CCAAGTGGTTGGCATGGTGA+AGG | - | chr7_3:85731465-85731484 | None:intergenic | 55.0% | |
CCTTCACCATGCCAACCACT+TGG | + | chr7_3:85731462-85731481 | Msa1132890:intron | 55.0% | |
TCACCATGCCAACCACTTGG+GGG | + | chr7_3:85731465-85731484 | Msa1132890:intron | 55.0% | |
TGGTCCTGGTGGTTTGAACG+GGG | - | chr7_3:85734945-85734964 | None:intergenic | 55.0% | |
GTTGGATGAAGGGATGGTCC+TGG | - | chr7_3:85734959-85734978 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+GGG | - | chr7_3:85735180-85735199 | None:intergenic | 55.0% | |
!! | GCGTTGATGGCGTGCATGTA+AGG | - | chr7_3:85735287-85735306 | None:intergenic | 55.0% |
TACATGCACGCCATCAACGC+CGG | + | chr7_3:85735287-85735306 | Msa1132890:intron | 55.0% | |
TCAGTGGTGGCAGACACAAG+TGG | + | chr7_3:85735414-85735433 | Msa1132890:intron | 55.0% | |
!! | GAGGAAGCACCGACCAAGAA+AGG | + | chr7_3:85736373-85736392 | Msa1132890:CDS | 55.0% |
!! | GAAGCACCGACCAAGAAAGG+TGG | + | chr7_3:85736376-85736395 | Msa1132890:CDS | 55.0% |
CACCGACCAAGAAAGGTGGA+AGG | + | chr7_3:85736380-85736399 | Msa1132890:CDS | 55.0% | |
AGGACTCTGCGGACAAGTAG+CGG | + | chr7_3:85736449-85736468 | Msa1132890:CDS | 55.0% | |
TCTGCGGACAAGTAGCGGTA+AGG | + | chr7_3:85736454-85736473 | Msa1132890:exon | 55.0% | |
GAAGCAAAACACCGTGCACC+TGG | + | chr7_3:85736851-85736870 | Msa1132890:three_prime_UTR | 55.0% | |
GTACATGTGTCCCAGGTGCA+CGG | - | chr7_3:85736865-85736884 | None:intergenic | 55.0% | |
!!! | TTTTTTTTGGGGGGGGGGGG+GGG | + | chr7_3:85731281-85731300 | Msa1132890:intron | 60.0% |
GGGCCTCGGTATTTGGTCCA+AGG | + | chr7_3:85731312-85731331 | Msa1132890:intron | 60.0% | |
!! | CCCGCTATGGGATTGGTCCT+CGG | - | chr7_3:85731348-85731367 | None:intergenic | 60.0% |
CCGAGGACCAATCCCATAGC+GGG | + | chr7_3:85731345-85731364 | Msa1132890:intron | 60.0% | |
AGGCTGGAGAGTCGAGACCT+AGG | - | chr7_3:85731445-85731464 | None:intergenic | 60.0% | |
GTGGTTGGCATGGTGAAGGC+TGG | - | chr7_3:85731461-85731480 | None:intergenic | 60.0% | |
TCACCCCCAAGTGGTTGGCA+TGG | - | chr7_3:85731471-85731490 | None:intergenic | 60.0% | |
TGCCAACCACTTGGGGGTGA+AGG | + | chr7_3:85731471-85731490 | Msa1132890:intron | 60.0% | |
GCCAACCACTTGGGGGTGAA+GGG | + | chr7_3:85731472-85731491 | Msa1132890:intron | 60.0% | |
CCAACCACTTGGGGGTGAAG+GGG | + | chr7_3:85731473-85731492 | Msa1132890:intron | 60.0% | |
CAAACCCCTTCACCCCCAAG+TGG | - | chr7_3:85731480-85731499 | None:intergenic | 60.0% | |
ATGGATGCTGAGCAAGGGGC+AGG | + | chr7_3:85734336-85734355 | Msa1132890:CDS | 60.0% | |
TGGATGCTGAGCAAGGGGCA+GGG | + | chr7_3:85734337-85734356 | Msa1132890:CDS | 60.0% | |
AAGGGGCAGGGTACGACGAT+GGG | + | chr7_3:85734349-85734368 | Msa1132890:CDS | 60.0% | |
TCTCCCCCGTTCAAACCACC+AGG | + | chr7_3:85734938-85734957 | Msa1132890:intron | 60.0% | |
GGTCCTGGTGGTTTGAACGG+GGG | - | chr7_3:85734944-85734963 | None:intergenic | 60.0% | |
GGATGAAGGGATGGTCCTGG+TGG | - | chr7_3:85734956-85734975 | None:intergenic | 60.0% | |
CTGAGCTAAGCTCACGGGGA+CGG | - | chr7_3:85735176-85735195 | None:intergenic | 60.0% | |
CCCCGTGAGCTTAGCTCAGT+TGG | + | chr7_3:85735177-85735196 | Msa1132890:intron | 60.0% | |
AAGGTCCGGGGTTCAAACCC+CGG | + | chr7_3:85735223-85735242 | Msa1132890:intron | 60.0% | |
GTGGTGGCAGACACAAGTGG+TGG | + | chr7_3:85735417-85735436 | Msa1132890:intron | 60.0% | |
!! | TGAAGGGTCATGGTGGACGG+TGG | + | chr7_3:85735457-85735476 | Msa1132890:intron | 60.0% |
!!! | TTTTTTTGGGGGGGGGGGGG+GGG | + | chr7_3:85731282-85731301 | Msa1132890:intron | 65.0% |
CCCCTTCACCCCCAAGTGGT+TGG | - | chr7_3:85731476-85731495 | None:intergenic | 65.0% | |
CAAGGGGCAGGGTACGACGA+TGG | + | chr7_3:85734348-85734367 | Msa1132890:CDS | 65.0% | |
AGCTAAGCTCACGGGGACGG+TGG | - | chr7_3:85735173-85735192 | None:intergenic | 65.0% | |
GGTGTCCGGGGTTTGAACCC+CGG | - | chr7_3:85735231-85735250 | None:intergenic | 65.0% | |
GTGCATGTAAGGCGGCGTGG+TGG | - | chr7_3:85735276-85735295 | None:intergenic | 65.0% | |
!!! | TTTTTTGGGGGGGGGGGGGG+GGG | + | chr7_3:85731283-85731302 | Msa1132890:intron | 70.0% |
GGCGTGCATGTAAGGCGGCG+TGG | - | chr7_3:85735279-85735298 | None:intergenic | 70.0% | |
!! | TTTTTGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731284-85731303 | Msa1132890:intron | 75.0% |
GGGGGGGGGGCCTCGGTATT+TGG | + | chr7_3:85731305-85731324 | Msa1132890:intron | 75.0% | |
!!! | TTTTGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731285-85731304 | Msa1132890:intron | 80.0% |
! | TTTGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731286-85731305 | Msa1132890:intron | 85.0% |
! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731287-85731306 | Msa1132890:intron | 90.0% |
! | TGGGGGGGGGGGGGGGGGGG+GGG | + | chr7_3:85731288-85731307 | Msa1132890:intron | 95.0% |
! | GGGGGGGGGGGGGGGGGCCT+CGG | + | chr7_3:85731298-85731317 | Msa1132890:intron | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 85730531 | 85737176 | 85730531 | ID=Msa1132890;Name=Msa1132890 |
chr7_3 | mRNA | 85730531 | 85737176 | 85730531 | ID=Msa1132890-mRNA-1;Parent=Msa1132890;Name=Msa1132890-mRNA-1;_AED=0.19;_eAED=0.19;_QI=286|1|1|1|0.66|0.42|7|428|273 |
chr7_3 | exon | 85730531 | 85730732 | 85730531 | ID=Msa1132890-mRNA-1:exon:25739;Parent=Msa1132890-mRNA-1 |
chr7_3 | exon | 85730863 | 85730976 | 85730863 | ID=Msa1132890-mRNA-1:exon:25740;Parent=Msa1132890-mRNA-1 |
chr7_3 | exon | 85731060 | 85731248 | 85731060 | ID=Msa1132890-mRNA-1:exon:25741;Parent=Msa1132890-mRNA-1 |
chr7_3 | exon | 85731578 | 85731727 | 85731578 | ID=Msa1132890-mRNA-1:exon:25742;Parent=Msa1132890-mRNA-1 |
chr7_3 | exon | 85734328 | 85734540 | 85734328 | ID=Msa1132890-mRNA-1:exon:25743;Parent=Msa1132890-mRNA-1 |
chr7_3 | exon | 85736229 | 85736475 | 85736229 | ID=Msa1132890-mRNA-1:exon:25744;Parent=Msa1132890-mRNA-1 |
chr7_3 | exon | 85736756 | 85737176 | 85736756 | ID=Msa1132890-mRNA-1:exon:25745;Parent=Msa1132890-mRNA-1 |
chr7_3 | five_prime_UTR | 85730531 | 85730732 | 85730531 | ID=Msa1132890-mRNA-1:five_prime_utr;Parent=Msa1132890-mRNA-1 |
chr7_3 | five_prime_UTR | 85730863 | 85730946 | 85730863 | ID=Msa1132890-mRNA-1:five_prime_utr;Parent=Msa1132890-mRNA-1 |
chr7_3 | CDS | 85730947 | 85730976 | 85730947 | ID=Msa1132890-mRNA-1:cds;Parent=Msa1132890-mRNA-1 |
chr7_3 | CDS | 85731060 | 85731248 | 85731060 | ID=Msa1132890-mRNA-1:cds;Parent=Msa1132890-mRNA-1 |
chr7_3 | CDS | 85731578 | 85731727 | 85731578 | ID=Msa1132890-mRNA-1:cds;Parent=Msa1132890-mRNA-1 |
chr7_3 | CDS | 85734328 | 85734540 | 85734328 | ID=Msa1132890-mRNA-1:cds;Parent=Msa1132890-mRNA-1 |
chr7_3 | CDS | 85736229 | 85736468 | 85736229 | ID=Msa1132890-mRNA-1:cds;Parent=Msa1132890-mRNA-1 |
chr7_3 | three_prime_UTR | 85736469 | 85736475 | 85736469 | ID=Msa1132890-mRNA-1:three_prime_utr;Parent=Msa1132890-mRNA-1 |
chr7_3 | three_prime_UTR | 85736756 | 85737176 | 85736756 | ID=Msa1132890-mRNA-1:three_prime_utr;Parent=Msa1132890-mRNA-1 |
Gene Sequence |
Protein sequence |