AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0359510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0359510 MtrunA17_Chr3g0097101 99.590 244 1 0 1 244 1 244 0.0 500
Msa0359510 MtrunA17_Chr8g0380021 62.449 245 90 2 1 244 1 244 6.20e-106 306
Msa0359510 MtrunA17_Chr2g0284911 59.023 266 81 4 1 244 1 260 7.86e-104 301
Msa0359510 MtrunA17_Chr3g0077501 59.565 230 83 3 16 243 1 222 1.78e-92 271
Msa0359510 MtrunA17_Chr8g0351051 50.877 171 84 0 16 186 1 171 3.90e-53 172
Msa0359510 MtrunA17_Chr8g0351031 44.340 212 110 3 16 221 1 210 1.13e-52 170
Msa0359510 MtrunA17_Chr5g0420091 47.701 174 90 1 16 188 1 174 6.80e-47 155
Msa0359510 MtrunA17_Chr7g0246431 40.670 209 124 0 16 224 1 209 1.22e-46 154
Msa0359510 MtrunA17_Chr7g0220111 42.793 222 116 5 16 229 1 219 6.64e-46 153
Msa0359510 MtrunA17_Chr8g0351041 53.793 145 62 2 16 157 1 143 1.08e-45 150
Msa0359510 MtrunA17_Chr2g0279821 49.359 156 77 2 16 170 1 155 3.43e-45 151
Msa0359510 MtrunA17_Chr8g0366231 47.312 186 91 2 16 197 1 183 4.05e-45 151
Msa0359510 MtrunA17_Chr4g0061691 44.048 168 93 1 16 182 1 168 5.56e-45 150
Msa0359510 MtrunA17_Chr6g0455511 41.071 224 118 5 16 229 1 220 5.50e-44 148
Msa0359510 MtrunA17_Chr3g0122251 43.519 216 110 6 16 223 1 212 2.06e-43 147
Msa0359510 MtrunA17_Chr5g0420081 40.952 210 108 4 16 212 1 207 2.91e-43 146
Msa0359510 MtrunA17_Chr4g0057151 41.361 191 110 1 16 204 1 191 3.07e-43 145
Msa0359510 MtrunA17_Chr5g0411691 45.087 173 89 2 16 186 1 169 6.83e-43 145
Msa0359510 MtrunA17_Chr4g0061671 45.349 172 91 2 16 186 1 170 1.82e-42 142
Msa0359510 MtrunA17_Chr4g0049541 46.980 149 77 2 16 164 1 147 2.71e-41 140
Msa0359510 MtrunA17_Chr4g0018421 39.698 199 110 5 16 211 1 192 7.83e-40 136
Msa0359510 MtrunA17_Chr7g0220121 43.575 179 95 4 16 192 1 175 1.13e-38 135
Msa0359510 MtrunA17_Chr1g0204111 40.230 174 103 1 16 188 17 190 6.24e-37 130
Msa0359510 MtrunA17_Chr6g0474371 41.618 173 99 2 16 186 1 173 1.51e-36 127
Msa0359510 MtrunA17_Chr4g0020221 42.632 190 103 3 16 201 1 188 2.59e-36 129
Msa0359510 MtrunA17_Chr5g0412461 42.857 175 94 2 16 187 1 172 7.16e-36 127
Msa0359510 MtrunA17_Chr5g0412271 41.899 179 90 2 16 187 1 172 5.85e-35 124
Msa0359510 MtrunA17_Chr5g0427401 40.116 172 101 1 16 187 1 170 1.03e-34 124
Msa0359510 MtrunA17_Chr3g0125241 44.218 147 75 2 16 160 26 167 4.11e-34 122
Msa0359510 MtrunA17_Chr4g0049901 38.043 184 110 2 16 196 27 209 2.98e-33 120
Msa0359510 MtrunA17_Chr1g0164791 38.824 170 97 3 16 179 1 169 2.40e-32 118
Msa0359510 MtrunA17_Chr1g0159661 42.177 147 78 2 16 160 1 142 1.59e-31 114
Msa0359510 MtrunA17_Chr3g0142191 38.857 175 91 4 16 183 1 166 1.75e-31 115
Msa0359510 MtrunA17_Chr5g0404951 38.265 196 103 5 16 203 1 186 7.39e-30 111
Msa0359510 MtrunA17_Chr7g0246381 73.770 61 16 0 16 76 1 61 7.60e-29 103
Msa0359510 MtrunA17_Chr8g0377561 79.310 58 12 0 16 73 1 58 3.23e-28 103
Msa0359510 MtrunA17_Chr2g0308251 63.768 69 25 0 16 84 1 69 4.54e-27 99.8
Msa0359510 MtrunA17_Chr1g0173161 73.333 60 16 0 16 75 1 60 6.54e-26 97.1
Msa0359510 MtrunA17_Chr5g0427921 65.000 60 21 0 16 75 1 60 1.23e-24 92.8
Msa0359510 MtrunA17_Chr5g0425191 70.690 58 17 0 16 73 1 58 4.54e-23 90.1
Msa0359510 MtrunA17_Chr3g0134451 62.857 70 25 1 16 84 1 70 4.90e-23 95.5
Msa0359510 MtrunA17_Chr4g0044071 67.241 58 19 0 16 73 1 58 2.64e-22 88.6
Msa0359510 MtrunA17_Chr2g0292791 44.340 106 49 1 11 106 3 108 2.03e-20 86.7
Msa0359510 MtrunA17_Chr3g0099411 37.662 154 72 4 11 146 3 150 1.45e-19 84.0
Msa0359510 MtrunA17_Chr2g0325971 50.000 74 37 0 11 84 3 76 2.54e-19 83.6
Msa0359510 MtrunA17_Chr3g0099421 52.703 74 35 0 11 84 28 101 2.56e-19 84.3
Msa0359510 MtrunA17_Chr2g0333981 36.667 120 64 3 13 122 8 125 2.83e-19 82.4
Msa0359510 MtrunA17_Chr1g0208561 45.238 84 46 0 11 94 3 86 3.80e-19 83.2
Msa0359510 MtrunA17_Chr3g0089141 45.238 84 46 0 11 94 3 86 4.34e-19 82.8
Msa0359510 MtrunA17_Chr1g0206721 42.453 106 51 1 11 106 3 108 4.51e-19 83.2
Msa0359510 MtrunA17_Chr1g0208581 50.000 74 37 0 11 84 3 76 1.43e-18 81.6
Msa0359510 MtrunA17_Chr5g0419601 39.450 109 60 2 11 119 3 105 1.76e-18 81.6
Msa0359510 MtrunA17_Chr8g0376821 53.623 69 32 0 16 84 1 69 2.26e-18 80.1
Msa0359510 MtrunA17_Chr1g0206991 41.509 106 52 1 11 106 3 108 2.26e-18 80.1
Msa0359510 MtrunA17_Chr1g0206701 51.351 74 36 0 11 84 3 76 2.35e-18 81.3
Msa0359510 MtrunA17_Chr8g0355091 41.509 106 52 1 11 106 3 108 2.63e-18 80.9
Msa0359510 MtrunA17_Chr1g0169761 42.268 97 56 0 16 112 1 97 2.92e-18 79.7
Msa0359510 MtrunA17_Chr8g0379021 37.097 124 62 4 13 124 8 127 4.51e-18 79.0
Msa0359510 MtrunA17_Chr1g0187361 48.649 74 38 0 11 84 3 76 6.14e-18 80.1
Msa0359510 MtrunA17_Chr1g0188671 37.391 115 71 1 11 124 41 155 6.17e-18 80.9
Msa0359510 MtrunA17_Chr1g0166611 43.617 94 44 1 28 121 17 101 7.21e-18 77.4
Msa0359510 MtrunA17_Chr1g0175601 41.509 106 59 1 16 118 1 106 2.32e-17 77.4
Msa0359510 MtrunA17_Chr1g0149391 47.297 74 39 0 11 84 3 76 3.69e-17 77.8
Msa0359510 MtrunA17_Chr4g0074101 49.275 69 35 0 16 84 1 69 5.71e-17 76.6
Msa0359510 MtrunA17_Chr1g0175611 50.704 71 35 0 16 86 1 71 6.54e-17 75.9
Msa0359510 MtrunA17_Chr2g0317481 45.946 74 40 0 11 84 3 76 7.52e-17 77.0
Msa0359510 MtrunA17_Chr2g0317451 45.946 74 40 0 11 84 3 76 7.59e-17 77.0
Msa0359510 MtrunA17_Chr8g0357771 49.275 69 35 0 16 84 1 69 2.22e-16 74.7
Msa0359510 MtrunA17_Chr5g0422421 45.946 74 40 0 11 84 3 76 2.95e-16 75.5
Msa0359510 MtrunA17_Chr5g0422941 45.946 74 40 0 11 84 3 76 3.17e-16 75.5
Msa0359510 MtrunA17_Chr4g0018951 36.090 133 80 2 13 140 8 140 3.21e-16 73.9
Msa0359510 MtrunA17_Chr1g0180591 49.275 69 35 0 16 84 1 69 4.03e-16 73.9
Msa0359510 MtrunA17_Chr4g0052081 33.333 138 86 2 16 147 1 138 7.25e-16 73.2
Msa0359510 MtrunA17_Chr5g0417661 54.386 57 26 0 12 68 52 108 9.23e-16 71.6
Msa0359510 MtrunA17_Chr3g0119901 46.377 69 37 0 16 84 8 76 1.67e-15 72.8
Msa0359510 MtrunA17_Chr3g0085241 43.243 74 42 0 11 84 35 108 2.58e-15 73.2
Msa0359510 MtrunA17_Chr4g0052061 28.481 158 106 1 16 166 1 158 2.68e-15 71.2
Msa0359510 MtrunA17_Chr8g0356071 46.377 69 37 0 16 84 1 69 3.98e-15 70.9
Msa0359510 MtrunA17_Chr2g0300441 43.750 80 43 1 17 94 7 86 5.65e-15 72.0
Msa0359510 MtrunA17_Chr3g0089151 45.946 74 40 0 11 84 3 76 6.20e-15 69.3
Msa0359510 MtrunA17_Chr2g0300421 45.946 74 40 0 11 84 3 76 6.45e-15 70.5
Msa0359510 MtrunA17_Chr4g0060841 54.717 53 24 0 16 68 1 53 1.35e-14 72.4
Msa0359510 MtrunA17_Chr2g0308271 32.540 126 83 1 75 198 32 157 5.12e-13 65.9
Msa0359510 MtrunA17_Chr1g0206691 43.478 69 39 0 26 94 1 69 1.02e-12 65.5
Msa0359510 MtrunA17_Chr5g0427961 40.000 90 52 2 75 164 4 91 9.80e-12 61.6
Msa0359510 MtrunA17_Chr4g0071601 35.246 122 67 3 13 124 8 127 9.80e-12 62.0
Msa0359510 MtrunA17_Chr1g0187351 45.763 59 32 0 26 84 1 59 1.88e-11 58.5
Msa0359510 MtrunA17_Chr3g0111841 44.068 59 33 0 23 81 2 60 3.57e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0359510 AT3G58780.1 70.850 247 63 4 6 244 3 248 8.86e-120 342
Msa0359510 AT3G58780.5 70.850 247 63 4 6 244 9 254 1.37e-119 341
Msa0359510 AT2G42830.1 69.919 246 66 3 6 244 2 246 2.13e-118 338
Msa0359510 AT2G42830.2 69.355 248 66 4 6 244 2 248 1.08e-116 334
Msa0359510 AT3G58780.3 64.338 272 63 5 6 244 3 273 8.08e-114 327
Msa0359510 AT3G58780.4 62.500 280 63 5 6 244 3 281 1.16e-112 325
Msa0359510 AT3G58780.2 68.421 247 62 5 6 244 3 241 1.79e-112 323
Msa0359510 AT4G18960.1 63.008 246 82 4 7 244 8 252 5.31e-105 304
Msa0359510 AT4G09960.1 63.551 214 72 2 16 228 1 209 3.88e-94 276
Msa0359510 AT4G09960.6 63.551 214 72 2 16 228 2 210 4.28e-94 276
Msa0359510 AT4G09960.5 63.551 214 72 2 16 228 11 219 8.31e-94 275
Msa0359510 AT4G09960.3 63.256 215 73 2 15 228 26 235 1.60e-93 275
Msa0359510 AT4G09960.4 62.100 219 73 3 15 228 95 308 6.06e-91 271
Msa0359510 AT4G09960.2 60.280 214 65 3 16 228 1 195 9.24e-85 251
Msa0359510 AT4G18960.3 53.757 173 71 4 80 244 67 238 3.65e-53 172
Msa0359510 AT4G18960.2 53.757 173 71 4 80 244 67 238 3.65e-53 172
Msa0359510 AT2G45650.1 44.286 210 107 3 16 223 1 202 1.26e-51 168
Msa0359510 AT5G60910.1 45.355 183 99 1 16 197 1 183 1.55e-49 163
Msa0359510 AT2G45660.1 44.000 175 98 0 16 190 1 175 1.71e-47 157
Msa0359510 AT3G57230.1 47.742 155 80 1 16 170 1 154 2.75e-47 157
Msa0359510 AT3G57230.4 47.742 155 80 1 16 170 1 154 2.75e-47 157
Msa0359510 AT4G22950.2 47.368 171 89 1 16 186 1 170 9.26e-47 153
Msa0359510 AT3G57230.2 51.408 142 68 1 16 157 1 141 3.66e-46 151
Msa0359510 AT4G22950.3 47.647 170 88 1 16 185 1 169 5.21e-46 153
Msa0359510 AT4G22950.1 47.647 170 88 1 16 185 1 169 5.21e-46 153
Msa0359510 AT3G61120.1 41.981 212 121 1 16 227 1 210 1.95e-45 152
Msa0359510 AT1G26310.1 39.918 243 120 7 16 241 1 234 2.47e-45 152
Msa0359510 AT1G24260.1 45.641 195 100 3 16 207 1 192 4.21e-45 152
Msa0359510 AT1G69120.2 45.506 178 94 3 16 191 1 177 6.33e-45 150
Msa0359510 AT2G45660.2 46.358 151 81 0 16 166 1 151 9.43e-45 148
Msa0359510 AT1G24260.2 45.408 196 100 4 16 207 1 193 1.09e-44 150
Msa0359510 AT1G69120.1 45.506 178 94 3 16 191 1 177 3.43e-44 149
Msa0359510 AT5G62165.3 44.706 170 94 0 16 185 1 170 1.59e-43 146
Msa0359510 AT5G62165.1 44.706 170 94 0 16 185 1 170 1.59e-43 146
Msa0359510 AT5G62165.2 44.706 170 94 0 16 185 1 170 1.59e-43 146
Msa0359510 AT5G62165.10 47.170 159 83 1 16 173 1 159 3.72e-43 145
Msa0359510 AT5G62165.4 47.170 159 83 1 16 173 1 159 3.72e-43 145
Msa0359510 AT5G62165.17 49.296 142 72 0 16 157 1 142 4.81e-43 143
Msa0359510 AT5G62165.12 49.296 142 72 0 16 157 1 142 4.81e-43 143
Msa0359510 AT5G62165.11 49.296 142 72 0 16 157 1 142 4.81e-43 143
Msa0359510 AT5G62165.6 49.296 142 72 0 16 157 1 142 8.07e-43 142
Msa0359510 AT5G62165.9 49.296 142 72 0 16 157 1 142 8.07e-43 142
Msa0359510 AT5G62165.7 49.296 142 72 0 16 157 1 142 8.07e-43 142
Msa0359510 AT5G62165.8 49.296 142 72 0 16 157 1 142 8.07e-43 142
Msa0359510 AT5G62165.13 49.296 142 72 0 16 157 1 142 8.07e-43 142
Msa0359510 AT2G03710.3 44.253 174 94 2 16 187 1 173 1.14e-42 143
Msa0359510 AT2G03710.2 42.857 182 101 2 16 195 1 181 3.89e-42 144
Msa0359510 AT2G03710.1 42.857 182 101 2 16 195 1 181 4.30e-42 144
Msa0359510 AT5G15800.1 45.977 174 93 1 16 188 1 174 1.07e-41 143
Msa0359510 AT1G24260.3 48.750 160 78 3 16 171 1 160 1.10e-41 142
Msa0359510 AT5G15800.2 45.977 174 93 1 16 188 1 174 1.69e-41 142
Msa0359510 AT3G02310.1 45.977 174 93 1 16 188 1 174 1.90e-41 142
Msa0359510 AT4G18960.4 53.719 121 56 0 69 189 56 176 6.48e-41 139
Msa0359510 AT3G02310.2 46.784 171 90 1 16 185 1 171 7.63e-41 139
Msa0359510 AT4G37940.1 43.396 159 88 2 16 173 1 158 2.75e-40 139
Msa0359510 AT4G11880.2 45.860 157 83 2 16 171 1 156 5.72e-40 136
Msa0359510 AT4G11880.3 45.860 157 83 2 16 171 1 156 5.72e-40 136
Msa0359510 AT4G11880.4 48.299 147 74 2 16 161 1 146 1.01e-39 137
Msa0359510 AT4G11880.1 48.299 147 74 2 16 161 1 146 1.01e-39 137
Msa0359510 AT5G51860.2 43.678 174 97 1 16 188 1 174 6.96e-39 134
Msa0359510 AT4G37940.3 43.836 146 81 1 16 161 1 145 8.14e-39 133
Msa0359510 AT4G37940.4 45.070 142 77 1 16 157 1 141 1.46e-38 134
Msa0359510 AT2G22630.1 43.114 167 89 4 16 180 1 163 1.08e-37 132
Msa0359510 AT2G22630.2 43.114 167 89 4 16 180 1 163 1.08e-37 132
Msa0359510 AT5G51860.1 44.785 163 89 1 16 177 1 163 1.28e-37 131
Msa0359510 AT5G51870.4 42.347 196 105 5 16 208 1 191 1.93e-37 131
Msa0359510 AT5G51870.1 45.455 176 93 3 16 189 1 175 2.49e-37 130
Msa0359510 AT5G51870.3 42.347 196 105 5 16 208 11 201 3.02e-37 130
Msa0359510 AT5G51870.2 48.980 147 74 1 16 161 1 147 1.07e-36 127
Msa0359510 AT4G24540.1 41.436 181 100 2 16 193 1 178 1.29e-36 129
Msa0359510 AT5G51870.5 48.000 150 77 1 13 161 21 170 1.90e-36 127
Msa0359510 AT3G30260.1 44.231 156 76 3 16 165 1 151 4.96e-36 128
Msa0359510 AT5G13790.1 43.429 175 88 2 16 188 1 166 5.91e-36 129
Msa0359510 AT5G13790.2 43.182 176 90 2 16 188 1 169 1.02e-35 128
Msa0359510 AT2G22540.3 40.351 171 96 2 16 183 1 168 1.57e-35 127
Msa0359510 AT2G22540.1 40.351 171 96 2 16 183 1 168 1.57e-35 127
Msa0359510 AT2G14210.1 41.808 177 92 4 16 183 1 175 1.57e-34 124
Msa0359510 AT2G14210.2 41.808 177 92 4 16 183 1 175 2.03e-34 124
Msa0359510 AT5G20240.1 42.000 150 80 2 16 163 1 145 2.03e-32 117
Msa0359510 AT1G71692.1 39.560 182 102 2 16 189 1 182 2.06e-32 117
Msa0359510 AT5G62165.14 58.511 94 35 1 16 109 1 90 4.37e-32 114
Msa0359510 AT5G23260.4 39.086 197 107 4 9 197 6 197 1.93e-31 117
Msa0359510 AT2G22540.2 39.181 171 93 3 16 183 1 163 2.01e-31 116
Msa0359510 AT5G20240.2 42.958 142 74 2 16 155 1 137 3.89e-31 112
Msa0359510 AT5G23260.2 39.785 186 103 3 16 197 1 181 7.46e-31 115
Msa0359510 AT3G54340.1 40.994 161 82 4 16 171 1 153 1.52e-30 113
Msa0359510 AT3G57390.3 35.196 179 107 2 16 186 1 178 1.10e-29 111
Msa0359510 AT3G57390.1 35.196 179 107 2 16 186 1 178 2.14e-29 111
Msa0359510 AT5G23260.1 38.579 197 103 5 9 197 6 192 3.20e-29 110
Msa0359510 AT5G23260.3 39.247 186 90 4 16 197 1 167 1.09e-27 106
Msa0359510 AT5G65070.1 36.310 168 98 2 16 182 1 160 1.18e-25 100
Msa0359510 AT5G65050.2 35.632 174 101 3 16 187 1 165 1.60e-25 99.0
Msa0359510 AT5G10140.4 37.580 157 89 2 16 171 1 149 1.66e-25 99.4
Msa0359510 AT5G10140.1 38.816 152 84 2 16 166 1 144 2.72e-25 99.0
Msa0359510 AT5G65050.3 35.632 174 101 3 16 187 1 165 4.06e-25 98.6
Msa0359510 AT5G10140.2 38.816 152 84 2 16 166 1 144 4.46e-25 97.8
Msa0359510 AT5G65050.5 35.260 173 92 3 16 187 1 154 6.05e-25 97.8
Msa0359510 AT5G10140.3 38.816 152 84 2 16 166 1 144 7.11e-25 97.8
Msa0359510 AT5G65070.2 36.126 191 98 5 16 182 1 191 2.31e-24 97.4
Msa0359510 AT5G65080.3 39.623 159 83 5 16 171 8 156 4.63e-24 95.5
Msa0359510 AT5G65060.1 33.908 174 104 3 16 187 1 165 6.71e-24 95.5
Msa0359510 AT5G65060.3 33.908 174 104 3 16 187 1 165 6.84e-24 95.1
Msa0359510 AT5G65050.1 36.943 157 88 3 16 170 1 148 1.21e-23 94.4
Msa0359510 AT1G31140.1 39.073 151 83 3 16 161 1 147 2.31e-23 94.4
Msa0359510 AT5G65070.4 37.162 148 84 2 16 162 1 140 5.07e-23 91.7
Msa0359510 AT5G65070.5 36.111 180 91 5 16 171 1 180 5.55e-23 93.2
Msa0359510 AT5G65060.2 33.526 173 95 3 16 187 1 154 5.65e-23 92.8
Msa0359510 AT1G31140.2 38.710 155 80 4 16 161 1 149 8.39e-23 92.8
Msa0359510 AT1G77980.1 61.429 70 26 1 16 84 1 70 2.31e-22 94.0
Msa0359510 AT1G22130.1 75.926 54 13 0 16 69 1 54 2.76e-22 94.0
Msa0359510 AT5G65080.2 38.065 155 86 3 16 169 8 153 7.63e-22 90.1
Msa0359510 AT5G65070.3 62.712 59 22 0 16 74 1 59 2.79e-21 89.4
Msa0359510 AT1G77080.5 37.356 174 100 3 16 188 1 166 2.27e-20 85.5
Msa0359510 AT1G77080.11 36.994 173 100 3 16 187 1 165 8.61e-20 84.0
Msa0359510 AT1G77080.4 36.571 175 102 3 16 189 1 167 1.10e-19 84.3
Msa0359510 AT1G77950.3 52.857 70 32 1 16 84 1 70 1.62e-18 82.4
Msa0359510 AT1G77950.2 52.857 70 32 1 16 84 1 70 1.62e-18 82.4
Msa0359510 AT1G77950.1 52.857 70 32 1 16 84 1 70 1.62e-18 82.4
Msa0359510 AT1G77950.4 52.857 70 32 1 16 84 1 70 1.62e-18 82.4
Msa0359510 AT1G77080.2 35.028 177 98 3 16 189 1 163 2.47e-18 80.5
Msa0359510 AT1G77080.8 31.604 212 114 5 16 201 1 207 7.44e-18 79.7
Msa0359510 AT4G36590.1 41.880 117 60 3 17 133 7 115 1.90e-17 79.3
Msa0359510 AT1G65360.1 33.333 105 69 1 13 117 3 106 2.82e-17 78.6
Msa0359510 AT1G77080.12 36.478 159 84 3 16 171 1 145 8.43e-17 75.1
Msa0359510 AT1G18750.4 62.264 53 20 0 16 68 1 53 1.30e-16 78.6
Msa0359510 AT1G18750.1 62.264 53 20 0 16 68 1 53 1.56e-16 78.6
Msa0359510 AT1G18750.3 62.264 53 20 0 16 68 1 53 1.88e-16 78.2
Msa0359510 AT5G60440.1 37.069 116 59 2 13 126 3 106 2.09e-16 77.0
Msa0359510 AT1G01530.1 46.479 71 38 0 12 82 2 72 2.20e-16 76.3
Msa0359510 AT4G37435.1 57.895 57 24 0 16 72 1 57 2.79e-16 74.7
Msa0359510 AT2G34440.1 35.088 114 68 1 16 129 1 108 2.82e-16 74.3
Msa0359510 AT2G03060.2 30.476 210 109 8 16 206 1 192 5.88e-16 76.6
Msa0359510 AT2G03060.3 30.476 210 109 8 16 206 1 192 6.09e-16 76.6
Msa0359510 AT2G03060.7 30.476 210 109 8 16 206 1 192 6.09e-16 76.6
Msa0359510 AT2G03060.1 30.476 210 109 8 16 206 1 192 6.09e-16 76.6
Msa0359510 AT3G66656.1 47.143 70 37 0 16 85 1 70 7.98e-16 73.6
Msa0359510 AT1G72350.1 54.412 68 29 1 17 84 43 108 1.33e-15 73.9
Msa0359510 AT5G60910.2 33.333 117 78 0 81 197 5 121 5.77e-15 71.2
Msa0359510 AT2G24840.1 44.928 69 38 0 16 84 62 130 7.94e-15 72.4
Msa0359510 AT1G47760.1 44.737 76 42 0 16 91 1 76 2.35e-14 69.7
Msa0359510 AT3G04100.1 38.961 77 47 0 9 85 6 82 2.79e-14 69.7
Msa0359510 AT1G69540.1 30.723 166 86 5 16 181 1 137 6.49e-14 70.5
Msa0359510 AT1G69540.2 30.723 166 86 5 16 181 1 137 1.00e-13 70.1
Msa0359510 AT1G29962.1 43.836 73 41 0 12 84 3 75 2.28e-13 67.0
Msa0359510 AT1G28460.1 43.243 74 42 0 11 84 2 75 2.41e-13 66.6
Msa0359510 AT3G57230.5 33.962 106 65 2 69 170 16 120 2.48e-12 64.3
Msa0359510 AT3G57230.3 33.962 106 65 2 69 170 16 120 2.48e-12 64.3
Msa0359510 AT1G28450.1 39.189 74 45 0 11 84 2 75 1.16e-11 62.4

Find 46 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCACAGCTTTGCAAAATA+TGG 0.168262 3_1:-47137401 Msa0359510:intron
TCGAATCTGCCTTCTCAATT+TGG 0.180584 3_1:+47132332 None:intergenic
AGGATCTTCTCAAAAGAAAA+TGG 0.218426 3_1:-47137356 Msa0359510:CDS
ATCTGATCCAAGCAGATTTA+CGG 0.335141 3_1:+47130385 None:intergenic
AGATACAGATTCTGCGTTAG+TGG 0.372608 3_1:+47132564 None:intergenic
GATTTACGGGAAAGAAATTT+CGG 0.378533 3_1:+47130399 None:intergenic
TCAATTTGGATGATTCTTGC+TGG 0.395773 3_1:+47132346 None:intergenic
CGGTCATATGCTTGTGATGA+AGG 0.400301 3_1:+47130419 None:intergenic
GATCCTTCTCCACCTTCATT+TGG 0.416333 3_1:+47137373 None:intergenic
GAGATATTCAGAATCTAAAT+AGG 0.416939 3_1:-47132311 Msa0359510:intron
TCTGATCCAAGCAGATTTAC+GGG 0.422390 3_1:+47130386 None:intergenic
TTCTTTCCCGTAAATCTGCT+TGG 0.437872 3_1:-47130392 Msa0359510:CDS
AAAGAATCTCGAGGGTAGAT+TGG 0.440551 3_1:-47132156 Msa0359510:CDS
ACACAAGTTGGAGCGCAGTT+TGG 0.446128 3_1:+47130339 None:intergenic
TGATCACACATTGTTTGATC+TGG 0.450279 3_1:+47130449 None:intergenic
TGTATGAATATGCCAACAAC+AGG 0.477767 3_1:-47137177 Msa0359510:intron
AAGCAGAGTTAGATCTAGAA+AGG 0.478447 3_1:-47132123 Msa0359510:intron
GGATCTTCTCAAAAGAAAAT+GGG 0.486264 3_1:-47137355 Msa0359510:CDS
GGATTGAAAACACTACCAAT+AGG 0.493244 3_1:-47137309 Msa0359510:CDS
ATAGCTAGTGCAAATTCATA+AGG 0.498144 3_1:-47137747 Msa0359510:intron
TGTAAACTCAAACCTGTTGT+TGG 0.501282 3_1:+47137165 None:intergenic
TGAGACGTTGTTTGCTGATG+TGG 0.507873 3_1:-47131363 Msa0359510:CDS
ATATGCTTGTGATGAAGGTA+AGG 0.525429 3_1:+47130424 None:intergenic
CTCGAGGGTAGATTGGAGAA+AGG 0.529688 3_1:-47132149 Msa0359510:CDS
ATATGAATGCTTACACAAGT+TGG 0.536621 3_1:+47130327 None:intergenic
CTACCAAATGAAGGTGGAGA+AGG 0.538882 3_1:-47137376 Msa0359510:CDS
TCTCAAAAGAAAATGGGAAG+AGG 0.543069 3_1:-47137349 Msa0359510:CDS
GAGGGAAAATTGAAATCAAG+AGG 0.543111 3_1:-47137330 Msa0359510:CDS
ACTAGCTATATGTAGTTGCT+TGG 0.545871 3_1:+47137761 None:intergenic
CACATCCTTGGTGAAGCTCT+AGG 0.550741 3_1:-47132200 Msa0359510:CDS
CTTGTTGTCTTCTCCACTCG+TGG 0.551625 3_1:-47137205 Msa0359510:CDS
TAACAATTATCTACGAGCTA+AGG 0.555922 3_1:-47130657 Msa0359510:intron
CTCAAAAGAAAATGGGAAGA+GGG 0.561170 3_1:-47137348 Msa0359510:CDS
TTCATACAAGCGACCACGAG+TGG 0.567368 3_1:+47137192 None:intergenic
AATATGGAGCTACCAAATGA+AGG 0.573967 3_1:-47137385 Msa0359510:CDS
TGTATCTGAAGCTAATACCC+AGG 0.584785 3_1:-47132548 Msa0359510:intron
AAGAATCATCCAAATTGAGA+AGG 0.597770 3_1:-47132341 Msa0359510:CDS
TGTGGAGTTCATGCAAAAGC+GGG 0.598411 3_1:-47131345 Msa0359510:intron
CACGAGTGGAGAAGACAACA+AGG 0.599730 3_1:+47137206 None:intergenic
GTGTTAGAGCAACTATTGAA+AGG 0.619419 3_1:-47132609 Msa0359510:CDS
CAAAGAACTAAAGAATCTCG+AGG 0.620859 3_1:-47132165 Msa0359510:CDS
ATGTGGAGTTCATGCAAAAG+CGG 0.623084 3_1:-47131346 Msa0359510:CDS
ATGGAGCTACCAAATGAAGG+TGG 0.637434 3_1:-47137382 Msa0359510:CDS
AAAGAACTAAAGAATCTCGA+GGG 0.657285 3_1:-47132164 Msa0359510:CDS
GAGATCCTAGAGCTTCACCA+AGG 0.715769 3_1:+47132195 None:intergenic
ACGAGTGGAGAAGACAACAA+GGG 0.733610 3_1:+47137207 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAAAATTATATTTTTT+TGG - chr3_1:47136445-47136464 Msa0359510:intron 0.0%
!! ATAAAAATTTCATATTTCAA+TGG - chr3_1:47130600-47130619 Msa0359510:intron 10.0%
!!! TAAGTTTATTTTTATTTTTG+TGG - chr3_1:47131275-47131294 Msa0359510:intron 10.0%
!!! TTTTATAAAAAATAATTGTC+AGG - chr3_1:47132704-47132723 Msa0359510:intron 10.0%
!! ATAATTAACTTATTCATATA+AGG + chr3_1:47133015-47133034 None:intergenic 10.0%
!!! TAAAAAATTATCTATCATTT+TGG + chr3_1:47135267-47135286 None:intergenic 10.0%
!! CTTATTAATTATTTAATCAA+TGG + chr3_1:47135869-47135888 None:intergenic 10.0%
!!! TATAATTCTACATATTTTTT+TGG + chr3_1:47136034-47136053 None:intergenic 10.0%
!!! ATGTTAATTTTCATATTTTT+TGG + chr3_1:47136627-47136646 None:intergenic 10.0%
!!! ATTTAGAATTAATTAATTGA+CGG - chr3_1:47137284-47137303 Msa0359510:CDS 10.0%
!! TAACTATATTTATTAAGCAA+TGG + chr3_1:47130395-47130414 None:intergenic 15.0%
!! AAACATTAAATGATTGAATA+AGG - chr3_1:47130648-47130667 Msa0359510:intron 15.0%
!! TGATAAATAAAAAAACTTTG+TGG - chr3_1:47131147-47131166 Msa0359510:intron 15.0%
!! GATAAATAAAAAAACTTTGT+GGG - chr3_1:47131148-47131167 Msa0359510:intron 15.0%
!! TATATTGAAAAAAGAACAAA+AGG + chr3_1:47131353-47131372 None:intergenic 15.0%
!!! TTGTTCTTTTTTCAATATAT+TGG - chr3_1:47131354-47131373 Msa0359510:CDS 15.0%
!! TATAGATAAATTGATAAGAA+AGG + chr3_1:47131757-47131776 None:intergenic 15.0%
!! TTCTTATCAATTTATCTATA+AGG - chr3_1:47131757-47131776 Msa0359510:intron 15.0%
!!! TTTTACTAAAATTACTTGAA+GGG + chr3_1:47131815-47131834 None:intergenic 15.0%
!!! TTTTTACTAAAATTACTTGA+AGG + chr3_1:47131816-47131835 None:intergenic 15.0%
!!! TTGATTTTTCATTCTAAAAA+GGG - chr3_1:47131891-47131910 Msa0359510:intron 15.0%
!!! TGGAAACTTATTTAAATTTT+TGG - chr3_1:47132569-47132588 Msa0359510:CDS 15.0%
!!! ATTTTTTTTTCTTTTCCAAT+TGG + chr3_1:47133656-47133675 None:intergenic 15.0%
!!! GATTTTGTTTATTTTTCTTT+TGG - chr3_1:47133949-47133968 Msa0359510:intron 15.0%
!!! TAAATAGTTTTTTGTTTGTT+TGG + chr3_1:47134276-47134295 None:intergenic 15.0%
!!! TTATCTTCAAAATTGTTTTT+AGG + chr3_1:47134362-47134381 None:intergenic 15.0%
!! AGTTATTAGTATTATTGAAT+TGG - chr3_1:47134889-47134908 Msa0359510:intron 15.0%
!! AACTTTAATAAATGAGAATA+AGG + chr3_1:47135363-47135382 None:intergenic 15.0%
!! TGTGAAATTTATTGATAAAA+TGG + chr3_1:47136114-47136133 None:intergenic 15.0%
!! TTGATTGTATATTAATTCTA+GGG + chr3_1:47136235-47136254 None:intergenic 15.0%
!!! TCATTCTGTTTTTTTTTTTT+TGG + chr3_1:47136362-47136381 None:intergenic 15.0%
!! AAAAGAAATAAAATCTAACA+AGG + chr3_1:47136698-47136717 None:intergenic 15.0%
!!! TTGTTAGATTTTATTTCTTT+TGG - chr3_1:47136697-47136716 Msa0359510:intron 15.0%
!! TACTTCAATAAGATATAATT+TGG - chr3_1:47136869-47136888 Msa0359510:intron 15.0%
!! ATGATGTTAATGTATATATT+TGG - chr3_1:47136940-47136959 Msa0359510:intron 15.0%
!!! GTTAATATATTGACTATAAA+TGG + chr3_1:47136969-47136988 None:intergenic 15.0%
!! TGAAATTAATTACATATGTA+GGG + chr3_1:47137027-47137046 None:intergenic 15.0%
!! TTGAAATTAATTACATATGT+AGG + chr3_1:47137028-47137047 None:intergenic 15.0%
!!! ATCATCCAATTTTAAATTAA+TGG - chr3_1:47137253-47137272 Msa0359510:CDS 15.0%
!! AGAGAAGAATGAAAAATTTA+GGG + chr3_1:47130440-47130459 None:intergenic 20.0%
!! AAGAGAAGAATGAAAAATTT+AGG + chr3_1:47130441-47130460 None:intergenic 20.0%
!! AATGATTGAATAAGGAAATT+AGG - chr3_1:47130656-47130675 Msa0359510:intron 20.0%
!! ATGATTGAATAAGGAAATTA+GGG - chr3_1:47130657-47130676 Msa0359510:intron 20.0%
!!! ATCTTGATGTTTGTTATTAA+TGG - chr3_1:47131037-47131056 Msa0359510:intron 20.0%
!!! TTGTCAATTTTTTACTCTTT+TGG - chr3_1:47131233-47131252 Msa0359510:intron 20.0%
!! TGAAAAAAGGTTAATAGTAT+GGG + chr3_1:47131526-47131545 None:intergenic 20.0%
!! TTGAAAAAAGGTTAATAGTA+TGG + chr3_1:47131527-47131546 None:intergenic 20.0%
!! AAAGAAAAAGGATTGAAAAA+AGG + chr3_1:47131539-47131558 None:intergenic 20.0%
!!! CTTGATTTTTCATTCTAAAA+AGG - chr3_1:47131890-47131909 Msa0359510:intron 20.0%
!! AAAAGGGAATTGTAAAATAT+TGG - chr3_1:47131907-47131926 Msa0359510:intron 20.0%
!! TATTTACTTATAATAGTGAC+CGG - chr3_1:47132128-47132147 Msa0359510:CDS 20.0%
!!! ACTTTTACAGATAATCATAT+AGG + chr3_1:47132317-47132336 None:intergenic 20.0%
!!! GATTTTATAGTTTTTCACTA+AGG - chr3_1:47132620-47132639 Msa0359510:intron 20.0%
!!! CAAAATACATTATTGATAGT+AGG + chr3_1:47132948-47132967 None:intergenic 20.0%
!!! CTACTATCAATAATGTATTT+TGG - chr3_1:47132946-47132965 Msa0359510:intron 20.0%
!! GAAATTAATGAAAAAGAGTA+CGG - chr3_1:47133175-47133194 Msa0359510:intron 20.0%
!! TCATGTATACAAATCTTTAA+AGG - chr3_1:47133279-47133298 Msa0359510:intron 20.0%
!! CATGTATACAAATCTTTAAA+GGG - chr3_1:47133280-47133299 Msa0359510:intron 20.0%
!! TGTTATATAAGAAGAGAAAA+AGG - chr3_1:47133320-47133339 Msa0359510:intron 20.0%
!! GTTATATAAGAAGAGAAAAA+GGG - chr3_1:47133321-47133340 Msa0359510:intron 20.0%
!! AACATCATTAATTACAGTAT+AGG - chr3_1:47133566-47133585 Msa0359510:intron 20.0%
!! ACATCATTAATTACAGTATA+GGG - chr3_1:47133567-47133586 Msa0359510:intron 20.0%
!!! TAGACTTTGTAATAGATTTT+GGG + chr3_1:47133595-47133614 None:intergenic 20.0%
!!! TTAGACTTTGTAATAGATTT+TGG + chr3_1:47133596-47133615 None:intergenic 20.0%
!!! TTTATTTTTCTTTTGGTGTA+TGG - chr3_1:47133956-47133975 Msa0359510:intron 20.0%
!!! TTTTGTCATGTATTTTTTCT+TGG + chr3_1:47134245-47134264 None:intergenic 20.0%
!! TTATCATGTTTATTCATTTG+TGG + chr3_1:47134402-47134421 None:intergenic 20.0%
!!! TGTCTCATAAGATTTTTAAT+TGG + chr3_1:47134455-47134474 None:intergenic 20.0%
!! TTGAAATTTACTTTCAGATA+AGG + chr3_1:47134607-47134626 None:intergenic 20.0%
!!! GTAGTTTTTTGGTTTTATTT+CGG - chr3_1:47134926-47134945 Msa0359510:intron 20.0%
!! CAAAAAAATCAAGACAATAT+AGG + chr3_1:47135224-47135243 None:intergenic 20.0%
!!! AGAAAGATTATCTATCATTT+TGG + chr3_1:47135309-47135328 None:intergenic 20.0%
!! TTTGCTTGGAAATATATATT+AGG + chr3_1:47135428-47135447 None:intergenic 20.0%
!! GTGAATAAATTTAATTACCT+GGG + chr3_1:47135583-47135602 None:intergenic 20.0%
!! TGTGAATAAATTTAATTACC+TGG + chr3_1:47135584-47135603 None:intergenic 20.0%
!! GAAATTTATTGATAAAATGG+TGG + chr3_1:47136111-47136130 None:intergenic 20.0%
!! GTTGATTGTATATTAATTCT+AGG + chr3_1:47136236-47136255 None:intergenic 20.0%
!!! CAAGACTTGATTATTTTTAA+GGG + chr3_1:47136309-47136328 None:intergenic 20.0%
!!! ACAAGACTTGATTATTTTTA+AGG + chr3_1:47136310-47136329 None:intergenic 20.0%
!! ACAAAAATAATATTTCCAGT+TGG - chr3_1:47136557-47136576 Msa0359510:intron 20.0%
!! CAAAAATAATATTTCCAGTT+GGG - chr3_1:47136558-47136577 Msa0359510:intron 20.0%
!!! AACTATGACTTTTTTTTTGA+AGG + chr3_1:47136671-47136690 None:intergenic 20.0%
!! TCAATAAGATATAATTTGGT+TGG - chr3_1:47136873-47136892 Msa0359510:intron 20.0%
!! ATGTGATAGTTAAACTTAAT+CGG + chr3_1:47136901-47136920 None:intergenic 20.0%
!! ATATATTCATATAGGGTATA+GGG + chr3_1:47136999-47137018 None:intergenic 20.0%
!! AATATATTCATATAGGGTAT+AGG + chr3_1:47137000-47137019 None:intergenic 20.0%
!!! CTGAACCATTAATTTAAAAT+TGG + chr3_1:47137261-47137280 None:intergenic 20.0%
!!! AAATTTTGTTGATAATTTGC+AGG - chr3_1:47137412-47137431 Msa0359510:intron 20.0%
!! ATATAAATGTGATTTCTCAA+TGG + chr3_1:47137521-47137540 None:intergenic 20.0%
!! TTTCATTCTTCTCTTTTTGA+TGG - chr3_1:47130446-47130465 Msa0359510:CDS 25.0%
! AAAAAATCAAGAAGAAGAAG+TGG + chr3_1:47130526-47130545 None:intergenic 25.0%
! TTCATATTTCAATGGTTGAA+TGG - chr3_1:47130608-47130627 Msa0359510:intron 25.0%
!! TAAGAATCTTGAAGATTTTG+AGG + chr3_1:47130982-47131001 None:intergenic 25.0%
! AGAGTAAAAAATTGACAAAC+TGG + chr3_1:47131231-47131250 None:intergenic 25.0%
! CTGAAATAAGAGATAGAAAT+AGG - chr3_1:47131398-47131417 Msa0359510:intron 25.0%
!! AGAAGTAACAGCTTTAATTA+GGG - chr3_1:47131452-47131471 Msa0359510:intron 25.0%
! CATGGTTAATTACATATGTA+GGG + chr3_1:47131573-47131592 None:intergenic 25.0%
! TCATGGTTAATTACATATGT+AGG + chr3_1:47131574-47131593 None:intergenic 25.0%
! ATGTAATTAACCATGAAACT+TGG - chr3_1:47131578-47131597 Msa0359510:intron 25.0%
! TTCTTGTCCAATTGAAAATT+AGG - chr3_1:47131663-47131682 Msa0359510:intron 25.0%
! TCTTGTCCAATTGAAAATTA+GGG - chr3_1:47131664-47131683 Msa0359510:intron 25.0%
!! TTGAAACCCTAATTTTCAAT+TGG + chr3_1:47131673-47131692 None:intergenic 25.0%
!! CCTTTTAACAAAGATATGAA+GGG + chr3_1:47131720-47131739 None:intergenic 25.0%
! TTCCTTATAATAGTGATCAA+TGG + chr3_1:47132002-47132021 None:intergenic 25.0%
! CGTTCATTAATTGATGAATT+TGG - chr3_1:47132040-47132059 Msa0359510:intron 25.0%
!!! ATTTTTTCAAATAATCCCTC+CGG + chr3_1:47132150-47132169 None:intergenic 25.0%
! TCAAGATGTAATTATGAAAG+AGG - chr3_1:47132173-47132192 Msa0359510:CDS 25.0%
! AATCATATAGGTACAGATAA+TGG + chr3_1:47132305-47132324 None:intergenic 25.0%
! AGATTAAATTTATGAAGGTG+GGG + chr3_1:47132352-47132371 None:intergenic 25.0%
! CAGATTAAATTTATGAAGGT+GGG + chr3_1:47132353-47132372 None:intergenic 25.0%
! ACAGATTAAATTTATGAAGG+TGG + chr3_1:47132354-47132373 None:intergenic 25.0%
! AGGACAGATTAAATTTATGA+AGG + chr3_1:47132357-47132376 None:intergenic 25.0%
!!! TTAATCTGTCCTTTAGAATA+TGG - chr3_1:47132365-47132384 Msa0359510:intron 25.0%
! TAGTATGAATTATGAGGTTA+TGG + chr3_1:47132548-47132567 None:intergenic 25.0%
! AACCTCATAATTCATACTAA+TGG - chr3_1:47132549-47132568 Msa0359510:CDS 25.0%
! TTCCATTAGTATGAATTATG+AGG + chr3_1:47132554-47132573 None:intergenic 25.0%
!!! ATTTTTGGTCCAATATACTA+AGG - chr3_1:47132584-47132603 Msa0359510:CDS 25.0%
!!! ATGATAGTGTTATTTTTCTG+CGG - chr3_1:47132657-47132676 Msa0359510:intron 25.0%
! TTCAATTTCTTTCATGCTTA+TGG - chr3_1:47132889-47132908 Msa0359510:intron 25.0%
! TATATAAGACTCATTGCAAA+AGG - chr3_1:47133032-47133051 Msa0359510:intron 25.0%
!! TCAACTTCAGAATTTTTCAT+TGG + chr3_1:47133202-47133221 None:intergenic 25.0%
!!! CATGATTTTTGTTTTAGCTT+CGG + chr3_1:47133264-47133283 None:intergenic 25.0%
!! GAAATTTTTGTTCATGAAAC+TGG + chr3_1:47133485-47133504 None:intergenic 25.0%
!!! TTTTTTTCTTTTCCAATTGG+TGG + chr3_1:47133653-47133672 None:intergenic 25.0%
!!! ACTAGGCTGTAAATATTTTT+TGG + chr3_1:47133856-47133875 None:intergenic 25.0%
! CTGTTACAACAGATAAAATA+AGG + chr3_1:47134064-47134083 None:intergenic 25.0%
!!! TTTTTTCTTGGTTATGAACA+GGG + chr3_1:47134233-47134252 None:intergenic 25.0%
!!! ATTTTTTCTTGGTTATGAAC+AGG + chr3_1:47134234-47134253 None:intergenic 25.0%
! AAAACTATTTAACCAGACAA+AGG - chr3_1:47134285-47134304 Msa0359510:intron 25.0%
!!! AGATTTTTAATTGGTTTGAG+TGG + chr3_1:47134446-47134465 None:intergenic 25.0%
! TGAAGGATTCTTCTTTATTA+GGG + chr3_1:47134741-47134760 None:intergenic 25.0%
! TTGAAGGATTCTTCTTTATT+AGG + chr3_1:47134742-47134761 None:intergenic 25.0%
! ATAAAATCTACTAAGTTAGG+TGG + chr3_1:47134779-47134798 None:intergenic 25.0%
! GGAATAAAATCTACTAAGTT+AGG + chr3_1:47134782-47134801 None:intergenic 25.0%
! ATGAGAAACAATGATTGATA+AGG + chr3_1:47134997-47135016 None:intergenic 25.0%
! ATAAATGAGAATAAGGAAAC+TGG + chr3_1:47135356-47135375 None:intergenic 25.0%
! GAGATATTCAGAATCTAAAT+AGG - chr3_1:47135800-47135819 Msa0359510:intron 25.0%
! AACAATATGACAATCATTCA+AGG - chr3_1:47136253-47136272 Msa0359510:intron 25.0%
! AAAGTTTGTAATAGCTAGTT+TGG - chr3_1:47136400-47136419 Msa0359510:intron 25.0%
!!! TGATTAGCCTTAAATTTCTT+TGG - chr3_1:47136490-47136509 Msa0359510:intron 25.0%
!!! GATTAGCCTTAAATTTCTTT+GGG - chr3_1:47136491-47136510 Msa0359510:intron 25.0%
!! TAGCTTTTTATATTTGCAGT+TGG - chr3_1:47136515-47136534 Msa0359510:intron 25.0%
!! AGCTTTTTATATTTGCAGTT+GGG - chr3_1:47136516-47136535 Msa0359510:intron 25.0%
!!! TATGACTTTTTTTTTGAAGG+AGG + chr3_1:47136668-47136687 None:intergenic 25.0%
! AGAAATAAAATCTAACAAGG+AGG + chr3_1:47136695-47136714 None:intergenic 25.0%
! TGTGATAGTTAAACTTAATC+GGG + chr3_1:47136900-47136919 None:intergenic 25.0%
! GGTCGAAATATATTCATATA+GGG + chr3_1:47137006-47137025 None:intergenic 25.0%
! ACTTTACTGTATAGAAAAGA+CGG - chr3_1:47137161-47137180 Msa0359510:intron 25.0%
ATAGCTAGTGCAAATTCATA+AGG - chr3_1:47130364-47130383 Msa0359510:CDS 30.0%
AAGGAAATTAGGGATTAACT+TGG - chr3_1:47130667-47130686 Msa0359510:CDS 30.0%
TTTCACAGCTTTGCAAAATA+TGG - chr3_1:47130710-47130729 Msa0359510:intron 30.0%
AGGATCTTCTCAAAAGAAAA+TGG - chr3_1:47130755-47130774 Msa0359510:intron 30.0%
GGATCTTCTCAAAAGAAAAT+GGG - chr3_1:47130756-47130775 Msa0359510:intron 30.0%
AAAACTTTGTGGGATTTATG+AGG - chr3_1:47131158-47131177 Msa0359510:intron 30.0%
! CAGAAGTAACAGCTTTAATT+AGG - chr3_1:47131451-47131470 Msa0359510:intron 30.0%
TTAGGGTTAGAAAGATTTCT+AGG - chr3_1:47131469-47131488 Msa0359510:intron 30.0%
GAAAGAGAGAGAAAAGAAAA+AGG + chr3_1:47131551-47131570 None:intergenic 30.0%
!! AATGATGATGGAAATGAAGA+GGG + chr3_1:47131641-47131660 None:intergenic 30.0%
ACAAAGATATGAAGGGATTA+TGG + chr3_1:47131713-47131732 None:intergenic 30.0%
CCCTTCATATCTTTGTTAAA+AGG - chr3_1:47131717-47131736 Msa0359510:intron 30.0%
! GCCTTTTAACAAAGATATGA+AGG + chr3_1:47131721-47131740 None:intergenic 30.0%
CTCCATTGATCACTATTATA+AGG - chr3_1:47131997-47132016 Msa0359510:intron 30.0%
AACTACAGACCATATTCTAA+AGG + chr3_1:47132377-47132396 None:intergenic 30.0%
TTAGAATATGGTCTGTAGTT+AGG - chr3_1:47132377-47132396 Msa0359510:intron 30.0%
TAGAATATGGTCTGTAGTTA+GGG - chr3_1:47132378-47132397 Msa0359510:intron 30.0%
TTCCACAACAAATTAACTTC+TGG - chr3_1:47132445-47132464 Msa0359510:intron 30.0%
!! TACCAGAAGTTAATTTGTTG+TGG + chr3_1:47132450-47132469 None:intergenic 30.0%
! CTTTGTTGTCCTTAGTATAT+TGG + chr3_1:47132596-47132615 None:intergenic 30.0%
!!! TGATAGTGTTATTTTTCTGC+GGG - chr3_1:47132658-47132677 Msa0359510:intron 30.0%
! GAAAAGCATAAGAAAGAGAA+GGG + chr3_1:47132872-47132891 None:intergenic 30.0%
! TGAAAAGCATAAGAAAGAGA+AGG + chr3_1:47132873-47132892 None:intergenic 30.0%
AACTTCATATACACAAGTTG+AGG - chr3_1:47133091-47133110 Msa0359510:intron 30.0%
!! CAAATCTTTAAAGGGTATTG+TGG - chr3_1:47133288-47133307 Msa0359510:intron 30.0%
TGTTATTACACCATGTTGAA+TGG - chr3_1:47133357-47133376 Msa0359510:intron 30.0%
!! TTTGTTTCTACTCTTCCTAT+GGG - chr3_1:47133679-47133698 Msa0359510:intron 30.0%
TTCAATCATTACTGAGAAGA+CGG - chr3_1:47133749-47133768 Msa0359510:intron 30.0%
GTCACATATATTCATAACCA+GGG - chr3_1:47133771-47133790 Msa0359510:intron 30.0%
!!! AGGCTGTAAATATTTTTTGG+AGG + chr3_1:47133853-47133872 None:intergenic 30.0%
TACTATACCAAAGCAAACAA+CGG + chr3_1:47134032-47134051 None:intergenic 30.0%
!!! ATACAATGTGTTTTGGAAAG+GGG + chr3_1:47134158-47134177 None:intergenic 30.0%
!!! CATACAATGTGTTTTGGAAA+GGG + chr3_1:47134159-47134178 None:intergenic 30.0%
!!! TCATACAATGTGTTTTGGAA+AGG + chr3_1:47134160-47134179 None:intergenic 30.0%
! CTCATTCATACAATGTGTTT+TGG + chr3_1:47134165-47134184 None:intergenic 30.0%
TTCCATTACCCAATTATAGA+AGG - chr3_1:47134313-47134332 Msa0359510:intron 30.0%
!!! TGTTTTTAGGTAGATCCTTT+GGG + chr3_1:47134349-47134368 None:intergenic 30.0%
!!! TTGTTTTTAGGTAGATCCTT+TGG + chr3_1:47134350-47134369 None:intergenic 30.0%
! AAAAAGAGTTGTTTGAGACT+CGG - chr3_1:47134639-47134658 Msa0359510:intron 30.0%
CGAGATTATTGAAGATGATT+TGG + chr3_1:47134684-47134703 None:intergenic 30.0%
TTATCCAATCTAACTCAGAT+TGG + chr3_1:47134714-47134733 None:intergenic 30.0%
ATCTGAGTTAGATTGGATAA+AGG - chr3_1:47134714-47134733 Msa0359510:intron 30.0%
ATCCAAATATGCTTCTAATG+GGG + chr3_1:47134819-47134838 None:intergenic 30.0%
GATCCAAATATGCTTCTAAT+GGG + chr3_1:47134820-47134839 None:intergenic 30.0%
ATGTCTCGAAGCTTATTAAT+CGG + chr3_1:47134842-47134861 None:intergenic 30.0%
!! TATTGAATTGGTAGTGTTCT+AGG - chr3_1:47134901-47134920 Msa0359510:intron 30.0%
!!! TGTTCTAGGTAGTAGTTTTT+TGG - chr3_1:47134915-47134934 Msa0359510:intron 30.0%
AGAAAAGGAACGAAAAATAC+TGG + chr3_1:47135098-47135117 None:intergenic 30.0%
! AAATGCAGCTAATTTTTGCT+TGG + chr3_1:47135442-47135461 None:intergenic 30.0%
CCTTGTGGATGATAATTATA+TGG + chr3_1:47135708-47135727 None:intergenic 30.0%
CCATATAATTATCATCCACA+AGG - chr3_1:47135705-47135724 Msa0359510:intron 30.0%
CTTGCTGGTAAAACTAATAT+TGG + chr3_1:47135753-47135772 None:intergenic 30.0%
AAGAATCATCCAAATTGAGA+AGG - chr3_1:47135770-47135789 Msa0359510:intron 30.0%
ATTCAGAATCTAAATAGGTC+AGG - chr3_1:47135805-47135824 Msa0359510:intron 30.0%
AAAGAACTAAAGAATCTCGA+GGG - chr3_1:47135947-47135966 Msa0359510:intron 30.0%
ATGATGAGATTTATCATCCA+AGG - chr3_1:47136151-47136170 Msa0359510:intron 30.0%
TGATGAGATTTATCATCCAA+GGG - chr3_1:47136152-47136171 Msa0359510:intron 30.0%
AGCTAACCCAAAGAAATTTA+AGG + chr3_1:47136500-47136519 None:intergenic 30.0%
GGGTCGAAATATATTCATAT+AGG + chr3_1:47137007-47137026 None:intergenic 30.0%
TTAAACGTTGTAGAAGATCT+TGG + chr3_1:47137342-47137361 None:intergenic 30.0%
AGTCTTTGAATGTATCTAAC+AGG + chr3_1:47137384-47137403 None:intergenic 30.0%
TAACAATTATCTACGAGCTA+AGG - chr3_1:47137454-47137473 Msa0359510:intron 30.0%
GAGAAATCACATTTATATGC+AGG - chr3_1:47137523-47137542 Msa0359510:intron 30.0%
GATTTACGGGAAAGAAATTT+CGG + chr3_1:47137715-47137734 None:intergenic 30.0%
ACTAGCTATATGTAGTTGCT+TGG + chr3_1:47130353-47130372 None:intergenic 35.0%
GGCAAGATTTGAAAGAAACA+AGG + chr3_1:47130419-47130438 None:intergenic 35.0%
AATCAAGAAGAAGAAGTGGT+TGG + chr3_1:47130522-47130541 None:intergenic 35.0%
AATATGGAGCTACCAAATGA+AGG - chr3_1:47130726-47130745 Msa0359510:intron 35.0%
TCTCAAAAGAAAATGGGAAG+AGG - chr3_1:47130762-47130781 Msa0359510:intron 35.0%
CTCAAAAGAAAATGGGAAGA+GGG - chr3_1:47130763-47130782 Msa0359510:intron 35.0%
GAGGGAAAATTGAAATCAAG+AGG - chr3_1:47130781-47130800 Msa0359510:intron 35.0%
GGATTGAAAACACTACCAAT+AGG - chr3_1:47130802-47130821 Msa0359510:intron 35.0%
TGTATGAATATGCCAACAAC+AGG - chr3_1:47130934-47130953 Msa0359510:intron 35.0%
TGTAAACTCAAACCTGTTGT+TGG + chr3_1:47130949-47130968 None:intergenic 35.0%
AACTGGAGTTTGAGGAAAAT+TGG + chr3_1:47131214-47131233 None:intergenic 35.0%
AATTGACAAACTGGAGTTTG+AGG + chr3_1:47131222-47131241 None:intergenic 35.0%
! GCAGATTTTTCCAAGTTTCA+TGG + chr3_1:47131591-47131610 None:intergenic 35.0%
!! GAATGATGATGGAAATGAAG+AGG + chr3_1:47131642-47131661 None:intergenic 35.0%
TGGACAAGAAAGAATGATGA+TGG + chr3_1:47131653-47131672 None:intergenic 35.0%
AACATGTTCTCAATGCTGTT+AGG - chr3_1:47131955-47131974 Msa0359510:intron 35.0%
TTACTTATAATAGTGACCGG+AGG - chr3_1:47132131-47132150 Msa0359510:CDS 35.0%
TACTTATAATAGTGACCGGA+GGG - chr3_1:47132132-47132151 Msa0359510:CDS 35.0%
! CTTATAAATCCATGCTGGTT+AGG + chr3_1:47132407-47132426 None:intergenic 35.0%
TTGTGGAAAACAATGAGTCA+TGG + chr3_1:47132433-47132452 None:intergenic 35.0%
!!! GATAGTGTTATTTTTCTGCG+GGG - chr3_1:47132659-47132678 Msa0359510:intron 35.0%
TATTACACCATGTTGAATGG+TGG - chr3_1:47133360-47133379 Msa0359510:intron 35.0%
! TTGAGAGCCAATGACAATTT+TGG - chr3_1:47133411-47133430 Msa0359510:intron 35.0%
! TGAGAGCCAATGACAATTTT+GGG - chr3_1:47133412-47133431 Msa0359510:intron 35.0%
CAAAGACCCAAAATTGTCAT+TGG + chr3_1:47133421-47133440 None:intergenic 35.0%
!! CAATGACAATTTTGGGTCTT+TGG - chr3_1:47133419-47133438 Msa0359510:intron 35.0%
ATACAATGAAGACATGTGTG+TGG - chr3_1:47133621-47133640 Msa0359510:intron 35.0%
TACAATGAAGACATGTGTGT+GGG - chr3_1:47133622-47133641 Msa0359510:intron 35.0%
!! CTTTGTTTCTACTCTTCCTA+TGG - chr3_1:47133678-47133697 Msa0359510:intron 35.0%
ATGATCTCGAATTAACCCAT+AGG + chr3_1:47133697-47133716 None:intergenic 35.0%
TTGAAATACCCCATGTAGAT+CGG + chr3_1:47133734-47133753 None:intergenic 35.0%
GGTCACATATATTCATAACC+AGG - chr3_1:47133770-47133789 Msa0359510:intron 35.0%
ATAGGAACTGGTATGTTAGT+GGG + chr3_1:47133883-47133902 None:intergenic 35.0%
!!! TGTTGCTGTTTCGGTATTTT+GGG - chr3_1:47133923-47133942 Msa0359510:intron 35.0%
!! TCTTTTGGTGTATGGCTTTT+TGG - chr3_1:47133964-47133983 Msa0359510:intron 35.0%
AAAGGACACAGCAGAAAAAA+AGG + chr3_1:47134008-47134027 None:intergenic 35.0%
GTTGTTTGCTTTGGTATAGT+AGG - chr3_1:47134031-47134050 Msa0359510:intron 35.0%
! AATGAGCCTCATTTTACTTC+CGG - chr3_1:47134179-47134198 Msa0359510:intron 35.0%
AATGGAATCATTCCTTTGTC+TGG + chr3_1:47134300-47134319 None:intergenic 35.0%
CACCTTCTATAATTGGGTAA+TGG + chr3_1:47134318-47134337 None:intergenic 35.0%
TCCTTGCACCTTCTATAATT+GGG + chr3_1:47134324-47134343 None:intergenic 35.0%
TTCCTTGCACCTTCTATAAT+TGG + chr3_1:47134325-47134344 None:intergenic 35.0%
CTGATCATGCAAATTGTGTT+TGG + chr3_1:47134539-47134558 None:intergenic 35.0%
GCAAAATCTTCTTCATTGAG+GGG + chr3_1:47134574-47134593 None:intergenic 35.0%
GGCAAAATCTTCTTCATTGA+GGG + chr3_1:47134575-47134594 None:intergenic 35.0%
TGGCAAAATCTTCTTCATTG+AGG + chr3_1:47134576-47134595 None:intergenic 35.0%
! TTTCAGATAAGGCATCTACT+TGG + chr3_1:47134596-47134615 None:intergenic 35.0%
AGAACCAATCTGAGTTAGAT+TGG - chr3_1:47134707-47134726 Msa0359510:intron 35.0%
GGTAAGATCTTCTTCATTGA+AGG + chr3_1:47134758-47134777 None:intergenic 35.0%
TTCTAATGGGGAGATTTGAA+AGG + chr3_1:47134807-47134826 None:intergenic 35.0%
GGATCCAAATATGCTTCTAA+TGG + chr3_1:47134821-47134840 None:intergenic 35.0%
ATAAGCTTCGAGACATTCTA+AGG - chr3_1:47134846-47134865 Msa0359510:intron 35.0%
TTGTGTCTTTATCTCGATTC+AGG - chr3_1:47135128-47135147 Msa0359510:intron 35.0%
TGTGTCTTTATCTCGATTCA+GGG - chr3_1:47135129-47135148 Msa0359510:intron 35.0%
GTGTTAGAGCAACTATTGAA+AGG - chr3_1:47135502-47135521 Msa0359510:intron 35.0%
TCAATTTGGATGATTCTTGC+TGG + chr3_1:47135768-47135787 None:intergenic 35.0%
CAAAGAACTAAAGAATCTCG+AGG - chr3_1:47135946-47135965 Msa0359510:intron 35.0%
AAGCAGAGTTAGATCTAGAA+AGG - chr3_1:47135988-47136007 Msa0359510:intron 35.0%
ACAAATCTATTGTCTACCCT+TGG + chr3_1:47136171-47136190 None:intergenic 35.0%
!!! GACTTTTTTTTTGAAGGAGG+AGG + chr3_1:47136665-47136684 None:intergenic 35.0%
! CTGTATAGAAAAGACGGATT+TGG - chr3_1:47137167-47137186 Msa0359510:intron 35.0%
CCAAATATGTAACTGTGTCA+CGG + chr3_1:47137233-47137252 None:intergenic 35.0%
ACGATGATGATAAAAAGCTG+TGG - chr3_1:47137584-47137603 Msa0359510:intron 35.0%
GATGATAAAAAGCTGTGGAA+TGG - chr3_1:47137589-47137608 Msa0359510:intron 35.0%
TGATCACACATTGTTTGATC+TGG + chr3_1:47137665-47137684 None:intergenic 35.0%
ATATGCTTGTGATGAAGGTA+AGG + chr3_1:47137690-47137709 None:intergenic 35.0%
ATCTGATCCAAGCAGATTTA+CGG + chr3_1:47137729-47137748 None:intergenic 35.0%
! GCAAAAAGTGACTTGCCTAT+TGG + chr3_1:47130820-47130839 None:intergenic 40.0%
! ACTTTTTGCAAACGACGCAA+TGG - chr3_1:47130831-47130850 Msa0359510:intron 40.0%
GGACACTTATAAATCCATGC+TGG + chr3_1:47132412-47132431 None:intergenic 40.0%
AGTGTTACGTTAGATGCAGA+GGG + chr3_1:47132812-47132831 None:intergenic 40.0%
TAGTGTTACGTTAGATGCAG+AGG + chr3_1:47132813-47132832 None:intergenic 40.0%
! AGAGAAGGGTTCTTTTCTTG+TGG + chr3_1:47132858-47132877 None:intergenic 40.0%
!! AAAGGGTATTGTGGTAATCG+AGG - chr3_1:47133297-47133316 Msa0359510:intron 40.0%
!! TTTTGGGTCTTTGGCAAGTT+AGG - chr3_1:47133428-47133447 Msa0359510:intron 40.0%
ACCACTTAATCCGATCTACA+TGG - chr3_1:47133721-47133740 Msa0359510:intron 40.0%
CCACTTAATCCGATCTACAT+GGG - chr3_1:47133722-47133741 Msa0359510:intron 40.0%
CACTTAATCCGATCTACATG+GGG - chr3_1:47133723-47133742 Msa0359510:intron 40.0%
CATATATTCATAACCAGGGC+CGG - chr3_1:47133775-47133794 Msa0359510:intron 40.0%
TAGGAACTGGTATGTTAGTG+GGG + chr3_1:47133882-47133901 None:intergenic 40.0%
CATAGGAACTGGTATGTTAG+TGG + chr3_1:47133884-47133903 None:intergenic 40.0%
AAAGCATGCTACAACAGCAT+AGG + chr3_1:47133901-47133920 None:intergenic 40.0%
!! ATGCTTTGCTGTTGCTGTTT+CGG - chr3_1:47133914-47133933 Msa0359510:intron 40.0%
!!! CTGTTGCTGTTTCGGTATTT+TGG - chr3_1:47133922-47133941 Msa0359510:intron 40.0%
! TTTGGTTTCTTTCCTGTTGC+TGG - chr3_1:47133982-47134001 Msa0359510:intron 40.0%
TTTGCTTTGGTATAGTAGGC+TGG - chr3_1:47134035-47134054 Msa0359510:intron 40.0%
TTGCTTTGGTATAGTAGGCT+GGG - chr3_1:47134036-47134055 Msa0359510:intron 40.0%
! ACCCAATTATAGAAGGTGCA+AGG - chr3_1:47134320-47134339 Msa0359510:intron 40.0%
!! TAATTGGTTTGAGTGGACGA+TGG + chr3_1:47134439-47134458 None:intergenic 40.0%
! CATGCAAATTGTGTTTGGTG+TGG + chr3_1:47134534-47134553 None:intergenic 40.0%
AATGGGGAGATTTGAAAGGA+GGG + chr3_1:47134803-47134822 None:intergenic 40.0%
TAATGGGGAGATTTGAAAGG+AGG + chr3_1:47134804-47134823 None:intergenic 40.0%
! CTCCCCATTAGAAGCATATT+TGG - chr3_1:47134814-47134833 Msa0359510:intron 40.0%
CACAAACACTACGCTAGAAA+AGG + chr3_1:47135113-47135132 None:intergenic 40.0%
CATTTCTTGTGCGTTGGATT+GGG - chr3_1:47135152-47135171 Msa0359510:intron 40.0%
ATTTCTTGTGCGTTGGATTG+GGG - chr3_1:47135153-47135172 Msa0359510:intron 40.0%
AGATACAGATTCTGCGTTAG+TGG + chr3_1:47135550-47135569 None:intergenic 40.0%
! TGTATCTGAAGCTAATACCC+AGG - chr3_1:47135563-47135582 Msa0359510:intron 40.0%
TCGAATCTGCCTTCTCAATT+TGG + chr3_1:47135782-47135801 None:intergenic 40.0%
! TTTTTCTGCAGACACATCCT+TGG - chr3_1:47135899-47135918 Msa0359510:intron 40.0%
AAAGAATCTCGAGGGTAGAT+TGG - chr3_1:47135955-47135974 Msa0359510:intron 40.0%
ATGTGGAGTTCATGCAAAAG+CGG - chr3_1:47136765-47136784 Msa0359510:intron 40.0%
CCGTGACACAGTTACATATT+TGG - chr3_1:47137230-47137249 Msa0359510:CDS 40.0%
TTCTTTCCCGTAAATCTGCT+TGG - chr3_1:47137719-47137738 Msa0359510:intron 40.0%
TCTGATCCAAGCAGATTTAC+GGG + chr3_1:47137728-47137747 None:intergenic 40.0%
ATGGAGCTACCAAATGAAGG+TGG - chr3_1:47130729-47130748 Msa0359510:intron 45.0%
CTACCAAATGAAGGTGGAGA+AGG - chr3_1:47130735-47130754 Msa0359510:intron 45.0%
GATCCTTCTCCACCTTCATT+TGG + chr3_1:47130741-47130760 None:intergenic 45.0%
ACGAGTGGAGAAGACAACAA+GGG + chr3_1:47130907-47130926 None:intergenic 45.0%
!! GAGTGCATGACAGCTTTTTC+TGG + chr3_1:47131613-47131632 None:intergenic 45.0%
TTAGGGTTTCCTAACCAGCA+TGG - chr3_1:47132395-47132414 Msa0359510:intron 45.0%
TGTCAGTCCACCATTCAACA+TGG + chr3_1:47133370-47133389 None:intergenic 45.0%
GTGTGGGTAAATCCACCAAT+TGG - chr3_1:47133638-47133657 Msa0359510:intron 45.0%
CCCATGTAGATCGGATTAAG+TGG + chr3_1:47133725-47133744 None:intergenic 45.0%
!! TTTTTGGAGGCCCATACCTT+GGG + chr3_1:47133840-47133859 None:intergenic 45.0%
!!! TTTTTTGGAGGCCCATACCT+TGG + chr3_1:47133841-47133860 None:intergenic 45.0%
AGGAACTGGTATGTTAGTGG+GGG + chr3_1:47133881-47133900 None:intergenic 45.0%
TGCTACAACAGCATAGGAAC+TGG + chr3_1:47133895-47133914 None:intergenic 45.0%
!!! TGCTGTTTCGGTATTTTGGG+AGG - chr3_1:47133926-47133945 Msa0359510:intron 45.0%
!! GCTGTTTCGGTATTTTGGGA+GGG - chr3_1:47133927-47133946 Msa0359510:intron 45.0%
CAGAAAAAAAGGCCAGCAAC+AGG + chr3_1:47133997-47134016 None:intergenic 45.0%
TCCTTTGCCGTTGTTTGCTT+TGG - chr3_1:47134022-47134041 Msa0359510:intron 45.0%
ACCAAAGCAAACAACGGCAA+AGG + chr3_1:47134026-47134045 None:intergenic 45.0%
! TTTGCCATTTAGTGCACTCC+TGG - chr3_1:47134084-47134103 Msa0359510:intron 45.0%
! TATTTCAAGTGCCAAGCACC+AGG + chr3_1:47134105-47134124 None:intergenic 45.0%
TTCCAACGAATTTGGAGGCT+CGG + chr3_1:47134207-47134226 None:intergenic 45.0%
AGCCTCCAAATTCGTTGGAA+CGG - chr3_1:47134207-47134226 Msa0359510:intron 45.0%
GCATTTCTTGTGCGTTGGAT+TGG - chr3_1:47135151-47135170 Msa0359510:intron 45.0%
GTGTTAGTGTGTCAACCTTG+TGG + chr3_1:47135723-47135742 None:intergenic 45.0%
CAAATCAGAGCTAACCCAAC+TGG + chr3_1:47136575-47136594 None:intergenic 45.0%
!! CAGTTGGGTTAGCTCTGATT+TGG - chr3_1:47136573-47136592 Msa0359510:intron 45.0%
! TGAGACGTTGTTTGCTGATG+TGG - chr3_1:47136748-47136767 Msa0359510:intron 45.0%
TGTGGAGTTCATGCAAAAGC+GGG - chr3_1:47136766-47136785 Msa0359510:intron 45.0%
CACGGAGTTACTTGATAGGA+GGG + chr3_1:47137196-47137215 None:intergenic 45.0%
TCACGGAGTTACTTGATAGG+AGG + chr3_1:47137197-47137216 None:intergenic 45.0%
ACGTCACGGAGTTACTTGAT+AGG + chr3_1:47137200-47137219 None:intergenic 45.0%
TATCAAGTAACTCCGTGACG+TGG - chr3_1:47137199-47137218 Msa0359510:CDS 45.0%
ACGGATCTTTAACCACGTCA+CGG + chr3_1:47137214-47137233 None:intergenic 45.0%
CGGTCATATGCTTGTGATGA+AGG + chr3_1:47137695-47137714 None:intergenic 45.0%
!! ACAAATAAATTATAATTAAT+TGG + chr3_1:47136471-47136490 None:intergenic 5.0%
CACGAGTGGAGAAGACAACA+AGG + chr3_1:47130908-47130927 None:intergenic 50.0%
! CTTGTTGTCTTCTCCACTCG+TGG - chr3_1:47130906-47130925 Msa0359510:intron 50.0%
TTCATACAAGCGACCACGAG+TGG + chr3_1:47130922-47130941 None:intergenic 50.0%
!! TTTTGGAGGCCCATACCTTG+GGG + chr3_1:47133839-47133858 None:intergenic 50.0%
!! GTATGTTAGTGGGGGGTACT+AGG + chr3_1:47133873-47133892 None:intergenic 50.0%
GGAACTGGTATGTTAGTGGG+GGG + chr3_1:47133880-47133899 None:intergenic 50.0%
! AGCACCAGGAGTGCACTAAA+TGG + chr3_1:47134091-47134110 None:intergenic 50.0%
TTTAGTGCACTCCTGGTGCT+TGG - chr3_1:47134091-47134110 Msa0359510:intron 50.0%
!! TCGGTGCCGGAAGTAAAATG+AGG + chr3_1:47134188-47134207 None:intergenic 50.0%
! GAAGGTGCAAGGAAACCCAA+AGG - chr3_1:47134331-47134350 Msa0359510:intron 50.0%
! TCAGGGCATTTCTTGTGCGT+TGG - chr3_1:47135146-47135165 Msa0359510:intron 50.0%
CACATCCTTGGTGAAGCTCT+AGG - chr3_1:47135911-47135930 Msa0359510:intron 50.0%
GAGATCCTAGAGCTTCACCA+AGG + chr3_1:47135919-47135938 None:intergenic 50.0%
CTCGAGGGTAGATTGGAGAA+AGG - chr3_1:47135962-47135981 Msa0359510:intron 50.0%
CAGCAAACAACGTCTCATGC+TGG + chr3_1:47136745-47136764 None:intergenic 50.0%
! ACACAAGTTGGAGCGCAGTT+TGG + chr3_1:47137775-47137794 None:intergenic 50.0%
CACCGAGCCTCCAAATTCGT+TGG - chr3_1:47134202-47134221 Msa0359510:intron 55.0%
GGCCGTTCCAACGAATTTGG+AGG + chr3_1:47134212-47134231 None:intergenic 55.0%
CAGGGCCGTTCCAACGAATT+TGG + chr3_1:47134215-47134234 None:intergenic 55.0%
GCAAGCAGCGCTATAGCACC+AGG - chr3_1:47133810-47133829 Msa0359510:intron 60.0%
TATAGCACCAGGCCTCCCCA+AGG - chr3_1:47133821-47133840 Msa0359510:intron 60.0%
ACCAGGCCTCCCCAAGGTAT+GGG - chr3_1:47133827-47133846 Msa0359510:intron 60.0%
!! CGAATTTGGAGGCTCGGTGC+CGG + chr3_1:47134201-47134220 None:intergenic 60.0%
TCATAACCAGGGCCGGACCC+TGG - chr3_1:47133782-47133801 Msa0359510:intron 65.0%
CATAACCAGGGCCGGACCCT+GGG - chr3_1:47133783-47133802 Msa0359510:intron 65.0%
ATAACCAGGGCCGGACCCTG+GGG - chr3_1:47133784-47133803 Msa0359510:intron 65.0%
CACCAGGCCTCCCCAAGGTA+TGG - chr3_1:47133826-47133845 Msa0359510:intron 65.0%
TGGAGGCCCATACCTTGGGG+AGG + chr3_1:47133836-47133855 None:intergenic 65.0%
TAACCAGGGCCGGACCCTGG+GGG - chr3_1:47133785-47133804 Msa0359510:intron 70.0%
TGCTTGCACCCCCCAGGGTC+CGG + chr3_1:47133797-47133816 None:intergenic 70.0%
AGCGCTGCTTGCACCCCCCA+GGG + chr3_1:47133802-47133821 None:intergenic 70.0%
TAGCGCTGCTTGCACCCCCC+AGG + chr3_1:47133803-47133822 None:intergenic 70.0%
GCCCATACCTTGGGGAGGCC+TGG + chr3_1:47133831-47133850 None:intergenic 70.0%
AACCAGGGCCGGACCCTGGG+GGG - chr3_1:47133786-47133805 Msa0359510:intron 75.0%
! CACCCCCCAGGGTCCGGCCC+TGG + chr3_1:47133791-47133810 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 47130337 47137796 47130337 ID=Msa0359510;Name=Msa0359510
chr3_1 mRNA 47130337 47137796 47130337 ID=Msa0359510-mRNA-1;Parent=Msa0359510;Name=Msa0359510-mRNA-1;_AED=0.14;_eAED=0.14;_QI=60|1|0.87|1|0.85|0.75|8|0|244
chr3_1 exon 47130337 47130516 47130337 ID=Msa0359510-mRNA-1:exon:8304;Parent=Msa0359510-mRNA-1
chr3_1 exon 47130658 47130699 47130658 ID=Msa0359510-mRNA-1:exon:8303;Parent=Msa0359510-mRNA-1
chr3_1 exon 47131346 47131387 47131346 ID=Msa0359510-mRNA-1:exon:8302;Parent=Msa0359510-mRNA-1
chr3_1 exon 47132124 47132223 47132124 ID=Msa0359510-mRNA-1:exon:8301;Parent=Msa0359510-mRNA-1
chr3_1 exon 47132312 47132373 47132312 ID=Msa0359510-mRNA-1:exon:8300;Parent=Msa0359510-mRNA-1
chr3_1 exon 47132549 47132630 47132549 ID=Msa0359510-mRNA-1:exon:8299;Parent=Msa0359510-mRNA-1
chr3_1 exon 47137178 47137415 47137178 ID=Msa0359510-mRNA-1:exon:8298;Parent=Msa0359510-mRNA-1
chr3_1 exon 47137748 47137796 47137748 ID=Msa0359510-mRNA-1:exon:8297;Parent=Msa0359510-mRNA-1
chr3_1 five_prime_UTR 47137748 47137796 47137748 ID=Msa0359510-mRNA-1:five_prime_utr;Parent=Msa0359510-mRNA-1
chr3_1 five_prime_UTR 47137405 47137415 47137405 ID=Msa0359510-mRNA-1:five_prime_utr;Parent=Msa0359510-mRNA-1
chr3_1 CDS 47137178 47137404 47137178 ID=Msa0359510-mRNA-1:cds;Parent=Msa0359510-mRNA-1
chr3_1 CDS 47132549 47132630 47132549 ID=Msa0359510-mRNA-1:cds;Parent=Msa0359510-mRNA-1
chr3_1 CDS 47132312 47132373 47132312 ID=Msa0359510-mRNA-1:cds;Parent=Msa0359510-mRNA-1
chr3_1 CDS 47132124 47132223 47132124 ID=Msa0359510-mRNA-1:cds;Parent=Msa0359510-mRNA-1
chr3_1 CDS 47131346 47131387 47131346 ID=Msa0359510-mRNA-1:cds;Parent=Msa0359510-mRNA-1
chr3_1 CDS 47130658 47130699 47130658 ID=Msa0359510-mRNA-1:cds;Parent=Msa0359510-mRNA-1
chr3_1 CDS 47130337 47130516 47130337 ID=Msa0359510-mRNA-1:cds;Parent=Msa0359510-mRNA-1
Gene Sequence

>Msa0359510

ATGGAGCTACCAAATGAAGGTGGAGAAGGATCTTCTCAAAAGAAAATGGGAAGAGGGAAAATTGAAATCAAGAGGATTGAAAACACTACCAATAGGCAAGTCACTTTTTGCAAACGACGCAATGGATTGTTGAAGAAAGCTTATGAATTATCTGTTCTTTGTGATGCTGAAGTTGCCCTTGTTGTCTTCTCCACTCGTGGTCGCTTGTATGAATATGCCAACAACAGTGTTAGAGCAACTATTGAAAGGTACAAAAAAGCTTGTGCTGCTTCCACTAACGCAGAATCTGTATCTGAAGCTAATACCCAGTTTTACCAGCAAGAATCATCCAAATTGAGAAGGCAGATTCGAGATATTCAGAATCTAAATAGACACATCCTTGGTGAAGCTCTAGGATCTCTGAGTCTCAAAGAACTAAAGAATCTCGAGGGTAGATTGGAGAAAGGTTTAAGCAGAGTTAGATCTAGAAAGCATGAGACGTTGTTTGCTGATGTGGAGTTCATGCAAAAGCGGGAAATTGAGCTGCAAAATCATAACAATTATCTACGAGCTAAGATAGCTGAACATGAGAGAGCTCAACAACAGCAACAAAATTTGATGCCAGATCAAACAATGTGTGATCAGTCCTTACCTTCATCACAAGCATATGACCGAAATTTCTTTCCCGTAAATCTGCTTGGATCAGATCAGCAGCAGTATTCGCGTCAAGACCAAACTGCGCTCCAACTTGTGTAA
Protein sequence

>Msa0359510

MELPNEGGEGSSQKKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYANNSVRATIERYKKACAASTNAESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALGSLSLKELKNLEGRLEKGLSRVRSRKHETLFADVEFMQKREIELQNHNNYLRAKIAEHERAQQQQQNLMPDQTMCDQSLPSSQAYDRNFFPVNLLGSDQQQYSRQDQTALQLV*