AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0360320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0360320 MtrunA17_Chr3g0098141 98.488 926 12 2 1 926 1 924 0.0 1870
Msa0360320 MtrunA17_Chr6g0488831 26.607 887 518 25 27 893 12 785 6.75e-74 259
Msa0360320 MtrunA17_Chr4g0059611 31.667 300 180 4 28 325 7 283 3.79e-42 163
Msa0360320 MtrunA17_Chr4g0059611 28.161 174 106 4 479 642 381 545 5.16e-11 66.6
Msa0360320 MtrunA17_Chr5g0415131 29.167 312 193 6 28 336 22 308 4.58e-30 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0360320 AT4G27060.1 55.154 941 318 26 2 926 12 864 0.0 883
Msa0360320 AT1G50890.1 49.099 943 332 19 4 925 5 820 0.0 805
Msa0360320 AT2G07170.1 28.592 703 408 19 24 690 23 667 9.03e-66 237
Msa0360320 AT1G27210.1 33.333 315 182 6 27 338 34 323 8.34e-39 154
Msa0360320 AT1G59850.1 31.889 323 183 8 7 322 5 297 1.66e-31 130
Msa0360320 AT5G62580.2 27.249 378 232 8 29 390 7 357 4.38e-22 102
Msa0360320 AT5G62580.2 38.017 121 67 4 505 617 400 520 5.27e-11 67.0
Msa0360320 AT5G62580.1 27.249 378 232 8 29 390 7 357 4.38e-22 102
Msa0360320 AT5G62580.1 38.017 121 67 4 505 617 400 520 5.27e-11 67.0

Find 286 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTAAGGTAGTATGTTTC+TGG 0.144777 3_1:+49297309 Msa0360320:three_prime_UTR
TGGGTAAACCTTTCATTAAA+TGG 0.169194 3_1:-49294975 None:intergenic
TACAATATGAGAAATGATTT+TGG 0.169530 3_1:-49290803 None:intergenic
AGTCCCTTCTTTCAAGGTTT+TGG 0.187898 3_1:-49294190 None:intergenic
TGTTCTTTCGTTTGAATCTT+TGG 0.207431 3_1:-49294300 None:intergenic
TCGGAGAGATGTTTGATATT+TGG 0.217970 3_1:+49297274 Msa0360320:three_prime_UTR
TTGAAATATATATGCTATTC+AGG 0.232514 3_1:+49297179 Msa0360320:three_prime_UTR
TCACCCTCATGCACTGATTT+TGG 0.232803 3_1:-49295152 None:intergenic
CTTGAAAGTTCGTTAATTAC+AGG 0.235814 3_1:-49295524 None:intergenic
AGATGGTGTTGATTGGGTTT+GGG 0.242862 3_1:-49290503 None:intergenic
TTAGTTCAACCATTGCTAAA+TGG 0.246465 3_1:-49290549 None:intergenic
CAGCAAGTTTCCTCTGTTAT+TGG 0.247579 3_1:-49294591 None:intergenic
GTGGAGGTATTATTTGAAAA+TGG 0.288123 3_1:+49296897 Msa0360320:CDS
GAGGTGAGGTGAAGCGGAAT+GGG 0.289577 3_1:-49290779 None:intergenic
AAGATGGTGTTGATTGGGTT+TGG 0.306895 3_1:-49290504 None:intergenic
TGAGGTAAGGTTGCTTGTTT+TGG 0.311535 3_1:-49290374 None:intergenic
CATCTAAGTCCCTTCTTTCA+AGG 0.313274 3_1:-49294196 None:intergenic
TGCCATCAGCCAATTCTTAC+TGG 0.320360 3_1:+49295571 Msa0360320:CDS
AAACACGGATTCAAATTCTA+AGG 0.324017 3_1:+49294076 Msa0360320:CDS
GATGGTTCTGCCAATATTGC+AGG 0.325702 3_1:+49294530 Msa0360320:CDS
TTGGAAGCAATTCGGGTTGC+TGG 0.325884 3_1:+49295281 Msa0360320:CDS
CGAGATCTTCGAGTGCGATT+TGG 0.328051 3_1:-49290621 None:intergenic
ATTGCTTCAGCAGTCATTTC+AGG 0.328304 3_1:-49295344 None:intergenic
ATCTGACATGCCTGAGGGTT+GGG 0.330263 3_1:+49295046 Msa0360320:CDS
CTGGTTGTCAATGCCTAACT+AGG 0.330597 3_1:+49297328 Msa0360320:three_prime_UTR
GAAAATGGCCCCGATACTTT+TGG 0.330651 3_1:+49296912 Msa0360320:CDS
TATAAGCAGTTTAAGATCAT+TGG 0.331319 3_1:-49290679 None:intergenic
CTCTGAGATGCTAGCCGCTT+TGG 0.332805 3_1:-49294099 None:intergenic
TCGTTTGCTTGTAAAGCTAA+TGG 0.334341 3_1:+49295490 Msa0360320:CDS
CAAACTGATGGGAATGCTTT+GGG 0.334628 3_1:+49294996 Msa0360320:CDS
CCAAAGCATTCCCATCAGTT+TGG 0.334631 3_1:-49294995 None:intergenic
GGGATGCAATCTGGACTTCT+TGG 0.336810 3_1:+49295393 Msa0360320:CDS
AACAACTTTACAGGATTTCA+TGG 0.341994 3_1:+49294755 Msa0360320:intron
GAATATTCCAATTCCAAGTA+TGG 0.343450 3_1:+49294930 Msa0360320:CDS
AGCTACCTTGGAAGCAATTC+GGG 0.349041 3_1:+49295274 Msa0360320:CDS
ACCTCTTCCATACTTGGAAT+TGG 0.356217 3_1:-49294937 None:intergenic
AGGTGAGGTGAAGCGGAATG+GGG 0.360137 3_1:-49290778 None:intergenic
GCATTGTTGGATACTGGATA+TGG 0.365153 3_1:+49297445 Msa0360320:three_prime_UTR
GGGTAAACCTTTCATTAAAT+GGG 0.377322 3_1:-49294974 None:intergenic
CTGTTTGTCTTGGATTCAAC+AGG 0.377615 3_1:+49295613 Msa0360320:CDS
AAGCCCTTCTTGAGGAAATC+TGG 0.378285 3_1:-49295100 None:intergenic
CCAAACTGATGGGAATGCTT+TGG 0.381537 3_1:+49294995 Msa0360320:CDS
ATTTCCTCAAGAAGGGCTTT+TGG 0.382043 3_1:+49295104 Msa0360320:CDS
TCTACAACAGCATGACAAAT+AGG 0.382878 3_1:+49297064 Msa0360320:CDS
TTTGGTGGTAGTTCTGTTGA+TGG 0.385894 3_1:+49295122 Msa0360320:CDS
AAGCTACCTTGGAAGCAATT+CGG 0.386766 3_1:+49295273 Msa0360320:CDS
GACAAGAGAGGGATGCAATC+TGG 0.389621 3_1:+49295384 Msa0360320:CDS
CAAAGCATTCCCATCAGTTT+GGG 0.392101 3_1:-49294994 None:intergenic
CGGTGGTGCGGCGGTGGTGC+CGG 0.393562 3_1:+49291074 Msa0360320:CDS
TGAATCCGTGTTTGAAGAAC+TGG 0.393570 3_1:-49294066 None:intergenic
GGTGAGGTGAAGCGGAATGG+GGG 0.396956 3_1:-49290777 None:intergenic
CGGCCTTCTAGCAAGTATAA+TGG 0.397102 3_1:+49294900 Msa0360320:CDS
TGTTTAATATCTGTTTGTCT+TGG 0.399936 3_1:+49295603 Msa0360320:CDS
ATATATGCTATTCAGGTATT+AGG 0.403210 3_1:+49297186 Msa0360320:three_prime_UTR
TCTGTCAAAACAGCTGGTTC+AGG 0.405991 3_1:-49293975 None:intergenic
ATCACCACCTCTTCCATACT+TGG 0.407097 3_1:-49294943 None:intergenic
TAGTTCAACCATTGCTAAAT+GGG 0.407574 3_1:-49290548 None:intergenic
AGAGGGCGGTGGTGCGGCGG+TGG 0.410631 3_1:+49291068 Msa0360320:CDS
AAACCATTATACTTGCTAGA+AGG 0.411374 3_1:-49294903 None:intergenic
CGAGCTGTGTTAACTGTCTC+TGG 0.412039 3_1:-49294619 None:intergenic
ATGGGAGCAATGTGAGTAAT+GGG 0.412250 3_1:+49290920 Msa0360320:CDS
GAGTAATGGGAATGGTTCTT+TGG 0.415685 3_1:+49290933 Msa0360320:CDS
GGCAGAGGCGTTAATTTCCT+TGG 0.415873 3_1:+49293188 Msa0360320:CDS
TAATGGTGGTGAGTAGAGTT+TGG 0.419410 3_1:-49290398 None:intergenic
TGTGGTATCTGCATTGTCTC+AGG 0.419488 3_1:+49291179 Msa0360320:CDS
GACATTACTTGAGGCTTGTC+GGG 0.420081 3_1:+49293257 Msa0360320:CDS
GAGATCTTCCTTCACTTCCA+TGG 0.420266 3_1:-49296940 None:intergenic
AGCGGTTTGTATGGCGAAAA+TGG 0.420727 3_1:+49291023 Msa0360320:CDS
ATGCCCATCCGGCTTGGTGA+GGG 0.422057 3_1:+49295212 Msa0360320:CDS
ATGGGAATGCTTTGGGGATG+AGG 0.424088 3_1:+49295003 Msa0360320:CDS
AATGGGAATGGTTCTTTGGT+TGG 0.424392 3_1:+49290937 Msa0360320:CDS
GGATCAGTCTTCCTCTCATC+AGG 0.425288 3_1:-49294023 None:intergenic
AACAGATACAGCAGAGGGCT+GGG 0.427775 3_1:+49296986 Msa0360320:CDS
AGTCCTGCTCCAGTAAGAAT+TGG 0.430985 3_1:-49295580 None:intergenic
GATGGTGTTGATTGGGTTTG+GGG 0.431349 3_1:-49290502 None:intergenic
ATGGGAACGCCAAAAGTATC+GGG 0.431616 3_1:-49296921 None:intergenic
ATCTTGAAGATGGTGTTGAT+TGG 0.431842 3_1:-49290510 None:intergenic
GGAGGTGAGGTGAAGCGGAA+TGG 0.433612 3_1:-49290780 None:intergenic
AATAGCATATATATTTCAAA+TGG 0.433866 3_1:-49297175 None:intergenic
GGGTATGGTGCTTCTAGAAA+TGG 0.437107 3_1:+49295077 Msa0360320:CDS
ACTGCCTCTCTAGCAGTGAT+TGG 0.437691 3_1:+49293148 Msa0360320:CDS
GGCCCTCTGCAAGAAGTGTT+TGG 0.439704 3_1:+49295234 Msa0360320:CDS
AATCTATATCACCTGCTTGA+AGG 0.442326 3_1:-49295433 None:intergenic
CAACAGATACAGCAGAGGGC+TGG 0.443613 3_1:+49296985 Msa0360320:CDS
CAAGATTTATCTATATCATC+TGG 0.444238 3_1:+49294852 Msa0360320:CDS
GATCACGCATTGTTGGATAC+TGG 0.445261 3_1:+49297439 Msa0360320:three_prime_UTR
TATTGCAGTTGGCATCAGGC+TGG 0.449399 3_1:+49297033 Msa0360320:CDS
GGATATCGTCATTATTACTA+AGG 0.452725 3_1:+49297295 Msa0360320:three_prime_UTR
AGTAGAGTTTGGATGAGGTA+AGG 0.455263 3_1:-49290387 None:intergenic
AGAAAGCAGCAATGCCCATC+CGG 0.458914 3_1:+49295201 Msa0360320:CDS
TCAGTGCATGAGGGTGATCA+AGG 0.459160 3_1:+49295158 Msa0360320:CDS
AGCTAGATCTGCGGGAGTGA+GGG 0.461052 3_1:-49290280 None:intergenic
AAGAGCAGACGAAGGATAAG+AGG 0.462697 3_1:-49290750 None:intergenic
GATCCATGGAAGCCATCATT+AGG 0.463808 3_1:-49294341 None:intergenic
TGACATTACTTGAGGCTTGT+CGG 0.465399 3_1:+49293256 Msa0360320:CDS
GGAACAGAATAAGGCTGTGC+AGG 0.465615 3_1:+49290993 Msa0360320:CDS
GTTTGTGAAGCCGTTGTTTG+AGG 0.465677 3_1:+49290963 Msa0360320:CDS
GGCAATTGCACCACAAAGCT+TGG 0.465892 3_1:+49293101 Msa0360320:CDS
CAATAACAGAGGAAACTTGC+TGG 0.466315 3_1:+49294592 Msa0360320:CDS
GGGTGGTGCAGCGGTTTGTA+TGG 0.467207 3_1:+49291014 Msa0360320:CDS
GTTTCCTCTGTTATTGGAGA+AGG 0.471162 3_1:-49294585 None:intergenic
TTGCTTCAGCAGTCATTTCA+GGG 0.471668 3_1:-49295343 None:intergenic
GATTCAAAGCCATTGTCATC+TGG 0.472394 3_1:+49293856 Msa0360320:CDS
TGTTTGAGCTTGAAGAATTG+AGG 0.477015 3_1:-49294253 None:intergenic
TCTTGAAGATGGTGTTGATT+GGG 0.479458 3_1:-49290509 None:intergenic
AACTGCAATAAAAGTTGATC+TGG 0.479996 3_1:-49297020 None:intergenic
AAGATCATTGGAATAGCGTC+TGG 0.482444 3_1:-49290667 None:intergenic
TGGGAATGCTTTGGGGATGA+GGG 0.483753 3_1:+49295004 Msa0360320:CDS
AGATGATTTACCAGTGGAAG+TGG 0.485279 3_1:+49294214 Msa0360320:CDS
CTAGTTTCTGTCAAAACAGC+TGG 0.488517 3_1:-49293981 None:intergenic
TTAATCAATTTACAGATCCT+AGG 0.488939 3_1:-49291120 None:intergenic
GCTTTGGGGATGAGGGGAAG+AGG 0.489491 3_1:+49295011 Msa0360320:CDS
AACACGTAAAGCAGCGGCAG+AGG 0.490093 3_1:+49293173 Msa0360320:CDS
AGCAAATTGTCCAAGCTTTG+TGG 0.496101 3_1:-49293111 None:intergenic
TGAGGGGAAGAGGGCCATCA+TGG 0.496177 3_1:+49295021 Msa0360320:CDS
CATGGGAACGCCAAAAGTAT+CGG 0.496207 3_1:-49296922 None:intergenic
TTTGCAGAGGTGTTGAGTAC+CGG 0.496406 3_1:+49295461 Msa0360320:CDS
TCTGTCAATAATAAATATCA+TGG 0.496589 3_1:+49294362 Msa0360320:CDS
TTTCCAAAACCTTGAAAGAA+GGG 0.496623 3_1:+49294187 Msa0360320:CDS
GTAAAGCTAATGGATAGAAC+TGG 0.499001 3_1:+49295500 Msa0360320:CDS
AATGGGAGCAATGTGAGTAA+TGG 0.501674 3_1:+49290919 Msa0360320:CDS
GACGCATCCCATTTAATGAA+AGG 0.502777 3_1:+49294967 Msa0360320:CDS
AGATCTTCCTTCACTTCCAT+GGG 0.503026 3_1:-49296939 None:intergenic
GTGCCTAATGATGGCTTCCA+TGG 0.503449 3_1:+49294338 Msa0360320:CDS
GGCCCCTCACCAAGCCGGAT+GGG 0.505667 3_1:-49295215 None:intergenic
CAGCCAATTCTTACTGGAGC+AGG 0.506497 3_1:+49295577 Msa0360320:CDS
AAGCCGTTGTTTGAGGCGAT+GGG 0.507165 3_1:+49290970 Msa0360320:CDS
TGAAGATGATCACGCATTGT+TGG 0.507207 3_1:+49297432 Msa0360320:three_prime_UTR
AACACAGCTCGAAAGACAAC+AGG 0.508350 3_1:+49294631 Msa0360320:CDS
TTCTAAAGATGAAGCTACCT+TGG 0.509264 3_1:+49295262 Msa0360320:CDS
TACACTCACTAAAACTATCA+AGG 0.509821 3_1:-49297151 None:intergenic
GCTGCTGTGGAAGAGGGCGG+TGG 0.510254 3_1:+49291057 Msa0360320:CDS
TCTGTCATGCTATCCCTCAC+AGG 0.513493 3_1:-49293781 None:intergenic
AGTACTTTATCATTTAAGAC+AGG 0.514596 3_1:-49294152 None:intergenic
ATTGCAGTTGGCATCAGGCT+GGG 0.514661 3_1:+49297034 Msa0360320:CDS
AATGCCCATCCGGCTTGGTG+AGG 0.515295 3_1:+49295211 Msa0360320:CDS
ATCATCTGGCCGTAGATTCG+AGG 0.515601 3_1:+49294866 Msa0360320:CDS
CTTAAACGAGTGTAATTACA+AGG 0.519695 3_1:-49297399 None:intergenic
TGCCCATCCGGCTTGGTGAG+GGG 0.520414 3_1:+49295213 Msa0360320:CDS
CTGCCTCTCTAGCAGTGATT+GGG 0.521198 3_1:+49293149 Msa0360320:CDS
GCGACACGCGTCACGAGAAG+CGG 0.522680 3_1:-49290848 None:intergenic
ATCTATATCACCTGCTTGAA+GGG 0.523713 3_1:-49295432 None:intergenic
CGAGGAACAACCACTTCCAC+TGG 0.526232 3_1:-49294224 None:intergenic
GGAGGGTTTAGGGTCGGAAA+CGG 0.526425 3_1:-49290707 None:intergenic
CGGATGATCCCTCGAATCTA+CGG 0.526798 3_1:-49294875 None:intergenic
TTTGGGGAGGTGAGGTGAAG+CGG 0.527956 3_1:-49290785 None:intergenic
CAGAGGGCCCCTCACCAAGC+CGG 0.528455 3_1:-49295220 None:intergenic
CGTTTCAGAAGATGTGTCCT+AGG 0.529106 3_1:+49291103 Msa0360320:CDS
GTTGATAAATCCTTCACTGA+TGG 0.530485 3_1:-49294044 None:intergenic
GAAGCCGTTGTTTGAGGCGA+TGG 0.531406 3_1:+49290969 Msa0360320:CDS
AAAATTGCAGGGAAAGGAGA+TGG 0.531496 3_1:+49293823 Msa0360320:CDS
GAAAGGTTTACCCAAACTGA+TGG 0.532245 3_1:+49294984 Msa0360320:CDS
GGCTGTGCAGGGTGGTGCAG+CGG 0.532573 3_1:+49291005 Msa0360320:CDS
GCAGCAATGCCCATCCGGCT+TGG 0.533907 3_1:+49295206 Msa0360320:CDS
GGGCCCCTCACCAAGCCGGA+TGG 0.534110 3_1:-49295216 None:intergenic
CGTAGATTCGAGGGATCATC+CGG 0.536072 3_1:+49294876 Msa0360320:CDS
GAATTATGAAGACTTTGCTC+AGG 0.536540 3_1:+49294421 Msa0360320:CDS
GACGCGTGTCGCGATTCGAT+TGG 0.536880 3_1:+49290859 Msa0360320:CDS
GAAGGAAAAGCTAGATCTGC+GGG 0.536922 3_1:-49290288 None:intergenic
TTTCCTCTGTTATTGGAGAA+GGG 0.537325 3_1:-49294584 None:intergenic
TGGTTGTCAATGCCTAACTA+GGG 0.537716 3_1:+49297329 Msa0360320:three_prime_UTR
GGAAGAGGGCGGTGGTGCGG+CGG 0.537767 3_1:+49291065 Msa0360320:CDS
GGTTTAGAGAGAGGTAATGA+TGG 0.539435 3_1:+49294383 Msa0360320:CDS
CGGGTTGCTGGCGAAGACAA+TGG 0.540016 3_1:+49295293 Msa0360320:CDS
ACTGGAAATGTGCCTAATGA+TGG 0.540300 3_1:+49294329 Msa0360320:CDS
TCCAATTCCAAGTATGGAAG+AGG 0.543705 3_1:+49294936 Msa0360320:CDS
ATGACGGCTGCTGTGGAAGA+GGG 0.543870 3_1:+49291051 Msa0360320:CDS
TGTGGAAGAGGGCGGTGGTG+CGG 0.544649 3_1:+49291062 Msa0360320:CDS
ATCTTCTGAAACGCACCGAC+CGG 0.546061 3_1:-49291093 None:intergenic
TACAAGCAAACGATCATCTC+CGG 0.548029 3_1:-49295480 None:intergenic
GATCTGACATGCCTGAGGGT+TGG 0.548576 3_1:+49295045 Msa0360320:CDS
ACAACTTTACAGGATTTCAT+GGG 0.549210 3_1:+49294756 Msa0360320:intron
GGTGCGGCGGTGGTGCCGGT+CGG 0.551013 3_1:+49291078 Msa0360320:CDS
ATTTATTATTGACAGATCCA+TGG 0.551274 3_1:-49294355 None:intergenic
GAATCGGAATGTGAGTGAAA+AGG 0.551383 3_1:-49290451 None:intergenic
GGGAATGCTTTGGGGATGAG+GGG 0.554035 3_1:+49295005 Msa0360320:CDS
AAATATCATGGTTTAGAGAG+AGG 0.554791 3_1:+49294374 Msa0360320:CDS
TGCCAAACACTTCTTGCAGA+GGG 0.554809 3_1:-49295236 None:intergenic
TGATGAAATGAGGATGATGA+TGG 0.555171 3_1:-49290310 None:intergenic
AATGACGGCTGCTGTGGAAG+AGG 0.555451 3_1:+49291050 Msa0360320:CDS
AGCGGCTAGCATCTCAGAGA+AGG 0.557871 3_1:+49294103 Msa0360320:CDS
AACGAAAGAACAAATGCCAC+TGG 0.558420 3_1:+49294311 Msa0360320:CDS
TCATCTGATGAACATGCTGC+AGG 0.558524 3_1:+49294655 Msa0360320:CDS
CTTTGGGGATGAGGGGAAGA+GGG 0.560490 3_1:+49295012 Msa0360320:CDS
AAGCTAGATCTGCGGGAGTG+AGG 0.562233 3_1:-49290281 None:intergenic
GCATTCGATGCCCTTCAAGC+AGG 0.562959 3_1:+49295422 Msa0360320:CDS
AAACAATGACGAAGAGTCAA+AGG 0.563879 3_1:+49294271 Msa0360320:CDS
CCAGGAAAATCCCAACCCTC+AGG 0.564933 3_1:-49295056 None:intergenic
TGGAATAGCGTCTGGTGTGA+GGG 0.566042 3_1:-49290659 None:intergenic
CTCAGAGGAGAGAATAACAA+TGG 0.566355 3_1:+49290901 Msa0360320:CDS
ATGGCCAGATTTCCTCAAGA+AGG 0.566567 3_1:+49295096 Msa0360320:CDS
TTGGAATAGCGTCTGGTGTG+AGG 0.567129 3_1:-49290660 None:intergenic
ATCAACCAGTTCTTCAAACA+CGG 0.567185 3_1:+49294061 Msa0360320:CDS
TGGCCAGATTTCCTCAAGAA+GGG 0.567764 3_1:+49295097 Msa0360320:CDS
TTTGATGGAGGGTTTAGGGT+CGG 0.568865 3_1:-49290713 None:intergenic
GCCGTTGTTTGAGGCGATGG+GGG 0.568974 3_1:+49290972 Msa0360320:CDS
TGCAATAAAAGTTGATCTGG+TGG 0.569536 3_1:-49297017 None:intergenic
ACTATCTTCCCATTTAGCAA+TGG 0.569987 3_1:+49290540 Msa0360320:CDS
GCCTCAAGTAATGTCACTGT+GGG 0.571336 3_1:-49293249 None:intergenic
AAGTATGGAAGAGGTGGTGA+TGG 0.571431 3_1:+49294945 Msa0360320:CDS
TGAAATGACTGCTGAAGCAA+TGG 0.573354 3_1:+49295346 Msa0360320:CDS
GCTGCATCTTGGTGACTGGT+CGG 0.573860 3_1:+49297255 Msa0360320:three_prime_UTR
TGGCGTTCCCATGGAAGTGA+AGG 0.573985 3_1:+49296932 Msa0360320:CDS
ATAGCATATATATTTCAAAT+GGG 0.576309 3_1:-49297174 None:intergenic
ACTTTACAGGATTTCATGGG+TGG 0.576754 3_1:+49294759 Msa0360320:intron
CAGGTCTGAAAATGATCAGA+GGG 0.576886 3_1:+49294508 Msa0360320:CDS
CAGTGCATGAGGGTGATCAA+GGG 0.578198 3_1:+49295159 Msa0360320:CDS
CTCCAGTAAGAATTGGCTGA+TGG 0.580708 3_1:-49295573 None:intergenic
AAAGGTTTACCCAAACTGAT+GGG 0.583083 3_1:+49294985 Msa0360320:CDS
GGTGGAAATGACGGCTGCTG+TGG 0.583290 3_1:+49291044 Msa0360320:CDS
GAACAGAATAAGGCTGTGCA+GGG 0.583765 3_1:+49290994 Msa0360320:CDS
ATCACCAAAATCAGTGCATG+AGG 0.583798 3_1:+49295148 Msa0360320:CDS
TCATCTGGCCGTAGATTCGA+GGG 0.585500 3_1:+49294867 Msa0360320:CDS
ACTTTATCATTTAAGACAGG+TGG 0.589099 3_1:-49294149 None:intergenic
GGCATGTCAGATCTCCATGA+TGG 0.590802 3_1:-49295035 None:intergenic
CATTGTTATTCTCTCCTCTG+AGG 0.590880 3_1:-49290900 None:intergenic
TCAGAGGAGAGAATAACAAT+GGG 0.591937 3_1:+49290902 Msa0360320:CDS
GGCGAAAATGGTGGAAATGA+CGG 0.592605 3_1:+49291035 Msa0360320:CDS
TGAGGCTTGTCGGGTTGACA+AGG 0.594149 3_1:+49293266 Msa0360320:CDS
AGCAACCCGAATTGCTTCCA+AGG 0.594619 3_1:-49295279 None:intergenic
AAGCTAACGATACAATTGAC+AGG 0.594959 3_1:+49294489 Msa0360320:CDS
GATACAGCAGAGGGCTGGGA+AGG 0.596715 3_1:+49296990 Msa0360320:CDS
AGCAGACGAAGGATAAGAGG+CGG 0.603373 3_1:-49290747 None:intergenic
ACAGAGTACGAGGTCTTGAG+AGG 0.605910 3_1:+49294811 Msa0360320:CDS
ATACTTGCTAGAAGGCCGAC+CGG 0.605980 3_1:-49294895 None:intergenic
TTGCCCAATCACTGCTAGAG+AGG 0.606495 3_1:-49293152 None:intergenic
ATTGCAGATAAGACCTGTGA+GGG 0.607487 3_1:+49293768 Msa0360320:intron
TTGAAAGTTCGTTAATTACA+GGG 0.608582 3_1:-49295523 None:intergenic
TTGCCAAACACTTCTTGCAG+AGG 0.610645 3_1:-49295237 None:intergenic
CTGTGTTAACTGTCTCTGGA+TGG 0.611596 3_1:-49294615 None:intergenic
GAAGACTGATCCATCAGTGA+AGG 0.612627 3_1:+49294034 Msa0360320:CDS
ATCATTAGGCACATTTCCAG+TGG 0.612837 3_1:-49294327 None:intergenic
ATGACAGTGCTGGACAAGAG+AGG 0.613076 3_1:+49295372 Msa0360320:CDS
TCATAATGTTCAGTTGGTGG+AGG 0.616121 3_1:+49296881 Msa0360320:intron
ATGATGGAAATTCAAGACAA+AGG 0.621293 3_1:+49294399 Msa0360320:CDS
ACGGCTGCTGTGGAAGAGGG+CGG 0.624455 3_1:+49291054 Msa0360320:CDS
TTCAAATTCTAAGGCCAAAG+CGG 0.624510 3_1:+49294085 Msa0360320:CDS
AAAATGTAAATCCTGATGAG+AGG 0.625162 3_1:+49294012 Msa0360320:CDS
AGTGATGAAGATCTTGAAGA+TGG 0.627626 3_1:-49290520 None:intergenic
GGTACTCAACACCTCTGCAA+AGG 0.627640 3_1:-49295459 None:intergenic
AGTGCATGAGGGTGATCAAG+GGG 0.628446 3_1:+49295160 Msa0360320:CDS
AGCCGTTGTTTGAGGCGATG+GGG 0.629180 3_1:+49290971 Msa0360320:CDS
ACTGCTTGAATGCAAAGCCA+AGG 0.630558 3_1:-49293205 None:intergenic
AATTCCAAGTATGGAAGAGG+TGG 0.631944 3_1:+49294939 Msa0360320:CDS
TCTGAAAATGATCAGAGGGA+TGG 0.633350 3_1:+49294512 Msa0360320:CDS
ATGGAGATCTGACATGCCTG+AGG 0.635807 3_1:+49295040 Msa0360320:CDS
TTTCTAGAAGCACCATACCC+AGG 0.635816 3_1:-49295074 None:intergenic
ACAGGTCTGAAAATGATCAG+AGG 0.638879 3_1:+49294507 Msa0360320:CDS
CGCTTCAACAGATACAGCAG+AGG 0.639129 3_1:+49296980 Msa0360320:CDS
GCCCACAGTGACATTACTTG+AGG 0.643788 3_1:+49293248 Msa0360320:CDS
GTGCGATTTGGTGAGTGTCG+CGG 0.645246 3_1:-49290609 None:intergenic
GAAGAATTGAGGCATTTGCG+AGG 0.645671 3_1:-49294242 None:intergenic
GCAATGGCTGATGACAGTGC+TGG 0.648208 3_1:+49295362 Msa0360320:CDS
TGAGACAATGCAGATACCAC+AGG 0.648682 3_1:-49291177 None:intergenic
TGGTGAGTAGAGTTTGGATG+AGG 0.648835 3_1:-49290392 None:intergenic
ATTGCTGCTCTTTACCTCAG+AGG 0.650571 3_1:+49290886 Msa0360320:CDS
TGACAGAGGCATTAGACCTG+TGG 0.654793 3_1:+49293797 Msa0360320:CDS
GATTTGGTGAGTGTCGCGGT+CGG 0.656463 3_1:-49290605 None:intergenic
AAGTGAAGGAAGATCTCTTG+CGG 0.657211 3_1:+49296946 Msa0360320:CDS
AAACTGATGGGAATGCTTTG+GGG 0.657970 3_1:+49294997 Msa0360320:CDS
GAAATGAGGATGATGATGGA+AGG 0.659056 3_1:-49290306 None:intergenic
GGGTGGATCTCATGATAGCA+TGG 0.661874 3_1:+49294776 Msa0360320:CDS
GGACTTAGATGATTTACCAG+TGG 0.662424 3_1:+49294208 Msa0360320:CDS
CAGAATAAGGCTGTGCAGGG+TGG 0.663665 3_1:+49290997 Msa0360320:CDS
TATAGATTCAGCCTTTGCAG+AGG 0.664298 3_1:+49295448 Msa0360320:CDS
TCACCAAAATCAGTGCATGA+GGG 0.665562 3_1:+49295149 Msa0360320:CDS
ATGTTCTTACCAGATGACAA+TGG 0.665770 3_1:-49293865 None:intergenic
TGACAGTGCTGGACAAGAGA+GGG 0.668635 3_1:+49295373 Msa0360320:CDS
ACCACCAAAAGCCCTTCTTG+AGG 0.671081 3_1:-49295108 None:intergenic
GGAAGGAAAAGCTAGATCTG+CGG 0.674517 3_1:-49290289 None:intergenic
TTGGTGGGGTGTGATGACAA+AGG 0.674643 3_1:-49290355 None:intergenic
GAATGAATGCAAAAGAACTG+AGG 0.674993 3_1:+49294462 Msa0360320:CDS
GCTTCAACAGATACAGCAGA+GGG 0.678873 3_1:+49296981 Msa0360320:CDS
TGGAGATCTGACATGCCTGA+GGG 0.683331 3_1:+49295041 Msa0360320:CDS
GTACCCTTCTCCAATAACAG+AGG 0.683761 3_1:+49294581 Msa0360320:CDS
AGCCTCAAGTAATGTCACTG+TGG 0.688883 3_1:-49293250 None:intergenic
GATTCGAGGGATCATCCGGT+CGG 0.688962 3_1:+49294880 Msa0360320:CDS
TTGGGCAACACGTAAAGCAG+CGG 0.692187 3_1:+49293167 Msa0360320:CDS
AGCAATGTGAGTAATGGGAA+TGG 0.693446 3_1:+49290925 Msa0360320:CDS
GTGCATGAGGGTGATCAAGG+GGG 0.693951 3_1:+49295161 Msa0360320:CDS
TGGGAACGCCAAAAGTATCG+GGG 0.701595 3_1:-49296920 None:intergenic
GATTGCAGATAAGACCTGTG+AGG 0.702226 3_1:+49293767 Msa0360320:intron
GGGGTGTGAAGAGCAGACGA+AGG 0.706689 3_1:-49290758 None:intergenic
TGTGAGGGATAGCATGACAG+AGG 0.715023 3_1:+49293783 Msa0360320:CDS
GGTTTGTATGGCGAAAATGG+TGG 0.734663 3_1:+49291026 Msa0360320:CDS
ACTCTAGAGAACAGAGTACG+AGG 0.734680 3_1:+49294801 Msa0360320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATTTCGAAAAATAT+GGG - chr3_1:49291774-49291793 None:intergenic 10.0%
!! CTAAAATATTTCGAAAAATA+TGG - chr3_1:49291775-49291794 None:intergenic 15.0%
!!! CATATTTTTCGAAATATTTT+AGG + chr3_1:49291773-49291792 Msa0360320:intron 15.0%
!!! TACTTATACATTTTTTTTAG+AGG - chr3_1:49291936-49291955 None:intergenic 15.0%
!! AAAATAAGATTTGTAAGAAA+TGG - chr3_1:49293393-49293412 None:intergenic 15.0%
!!! TTTATTTTGTTATGTTTAGT+TGG + chr3_1:49295969-49295988 Msa0360320:intron 15.0%
!! ATAGCATATATATTTCAAAT+GGG - chr3_1:49297177-49297196 None:intergenic 15.0%
!! AATAGCATATATATTTCAAA+TGG - chr3_1:49297178-49297197 None:intergenic 15.0%
!!! ACAATATGAGAAATGATTTT+GGG - chr3_1:49290805-49290824 None:intergenic 20.0%
!!! TACAATATGAGAAATGATTT+TGG - chr3_1:49290806-49290825 None:intergenic 20.0%
!!! GATTAATAACCCTAATTTTT+TGG + chr3_1:49291137-49291156 Msa0360320:CDS 20.0%
!!! ATTTGGATGTTTTTTTGTTT+TGG + chr3_1:49291210-49291229 Msa0360320:intron 20.0%
!! TTAGGAATTTAATCCTTAAT+TGG + chr3_1:49291670-49291689 Msa0360320:intron 20.0%
!!! GAAATTTGTAGATGTATTTT+AGG + chr3_1:49291969-49291988 Msa0360320:intron 20.0%
!! AATATGAAGTGACAAAATAA+TGG - chr3_1:49292061-49292080 None:intergenic 20.0%
!!! TTTTAAGATTTACTTACAAG+AGG + chr3_1:49292137-49292156 Msa0360320:intron 20.0%
!!! TTTAAGATTTACTTACAAGA+GGG + chr3_1:49292138-49292157 Msa0360320:intron 20.0%
!! TCATAATAGTAAATTCTCAT+TGG + chr3_1:49292171-49292190 Msa0360320:intron 20.0%
!! AACTCAATAGTATAACAAAA+CGG + chr3_1:49292520-49292539 Msa0360320:intron 20.0%
!!! TAAATAGAAGCTAAATTTTC+AGG - chr3_1:49292952-49292971 None:intergenic 20.0%
!! TTTATCACAAAATGATAACT+TGG - chr3_1:49293029-49293048 None:intergenic 20.0%
!!! CAAATCTTATTTTCTTGAAA+TGG + chr3_1:49293400-49293419 Msa0360320:intron 20.0%
!! AATTAATTCAATACAGTGTA+AGG + chr3_1:49293438-49293457 Msa0360320:intron 20.0%
!!! TTAGTCATCTAATTATTTTC+TGG + chr3_1:49293731-49293750 Msa0360320:intron 20.0%
!!! ATGATTTTTTATGCTTTAGA+TGG + chr3_1:49293945-49293964 Msa0360320:intron 20.0%
!! TCTGTCAATAATAAATATCA+TGG + chr3_1:49294362-49294381 Msa0360320:CDS 20.0%
!! CATCTATTCATACTATATTT+GGG - chr3_1:49295733-49295752 None:intergenic 20.0%
!! TCATCTATTCATACTATATT+TGG - chr3_1:49295734-49295753 None:intergenic 20.0%
!! TTTCGAAATTAATTAAACCA+AGG - chr3_1:49295870-49295889 None:intergenic 20.0%
!! ATTACATGATAATAGTATAG+AGG + chr3_1:49296358-49296377 Msa0360320:intron 20.0%
!! ATAGTTACAAGCTTATTTAT+AGG - chr3_1:49296480-49296499 None:intergenic 20.0%
!! AATACATCTTGAAGATAAAA+AGG - chr3_1:49296666-49296685 None:intergenic 20.0%
!! TCATATGAAAGATATAAACT+TGG - chr3_1:49296838-49296857 None:intergenic 20.0%
!! AAGTTTATATCTTTCATATG+AGG + chr3_1:49296837-49296856 Msa0360320:intron 20.0%
!! TTGAAATATATATGCTATTC+AGG + chr3_1:49297179-49297198 Msa0360320:three_prime_UTR 20.0%
!!! TTTTGTGTTCTTCATTTTTG+GGG - chr3_1:49290482-49290501 None:intergenic 25.0%
!!! GTTTTGTGTTCTTCATTTTT+GGG - chr3_1:49290483-49290502 None:intergenic 25.0%
!! TATAAGCAGTTTAAGATCAT+TGG - chr3_1:49290682-49290701 None:intergenic 25.0%
!! CAATATGAGAAATGATTTTG+GGG - chr3_1:49290804-49290823 None:intergenic 25.0%
! TTAATCAATTTACAGATCCT+AGG - chr3_1:49291123-49291142 None:intergenic 25.0%
!! GTTTAATTTCTATACACTGT+CGG + chr3_1:49291284-49291303 Msa0360320:intron 25.0%
!! GTTTAATTTCTATACACTGT+CGG + chr3_1:49291284-49291303 Msa0360320:intron 25.0%
!! TTTTAACGCAATAAACAATG+TGG + chr3_1:49291433-49291452 Msa0360320:intron 25.0%
! ATGAAATAACTTCACAATGT+AGG + chr3_1:49291478-49291497 Msa0360320:intron 25.0%
! TTTCAAATTATTAGCTGTGT+CGG + chr3_1:49291592-49291611 Msa0360320:intron 25.0%
! GAATTTAATCCTTAATTGGT+AGG + chr3_1:49291674-49291693 Msa0360320:intron 25.0%
! TTAAGATTTAGTTACAAGAG+TGG + chr3_1:49292087-49292106 Msa0360320:intron 25.0%
! TAAGATTTAGTTACAAGAGT+GGG + chr3_1:49292088-49292107 Msa0360320:intron 25.0%
! TTAAGATTTACTTACAAGAG+GGG + chr3_1:49292139-49292158 Msa0360320:intron 25.0%
! CCTGTATATTCAGATATAAT+TGG - chr3_1:49292280-49292299 None:intergenic 25.0%
! CCAATTATATCTGAATATAC+AGG + chr3_1:49292277-49292296 Msa0360320:intron 25.0%
!!! GGCATTTGTTGAAATATTTT+AGG + chr3_1:49292298-49292317 Msa0360320:intron 25.0%
! AGGAAATAATGTAGAGATTA+AGG + chr3_1:49292318-49292337 Msa0360320:intron 25.0%
! GGAAATAATGTAGAGATTAA+GGG + chr3_1:49292319-49292338 Msa0360320:intron 25.0%
! GAAATAATGTAGAGATTAAG+GGG + chr3_1:49292320-49292339 Msa0360320:intron 25.0%
!!! GAAAAATAATGGATTCTCAT+TGG - chr3_1:49292383-49292402 None:intergenic 25.0%
! TTGAAACTAATGATATGAAG+CGG - chr3_1:49292405-49292424 None:intergenic 25.0%
! AAACTAATATGTCAGAATAG+TGG + chr3_1:49292442-49292461 Msa0360320:intron 25.0%
! AACTAATATGTCAGAATAGT+GGG + chr3_1:49292443-49292462 Msa0360320:intron 25.0%
! TACCTAAATTTCAGATAGTA+TGG - chr3_1:49292653-49292672 None:intergenic 25.0%
! AAAGATTGAACCAATTCATT+TGG - chr3_1:49292703-49292722 None:intergenic 25.0%
!!! ATGAATTGGTTCAATCTTTT+TGG + chr3_1:49292704-49292723 Msa0360320:intron 25.0%
! TTCTGTTCTACTAAAACAAA+AGG - chr3_1:49292732-49292751 None:intergenic 25.0%
!!! CTTTTAAAATTGAACAGAAC+AGG - chr3_1:49292776-49292795 None:intergenic 25.0%
!!! AAGAAGCACTAAATATAGAA+TGG + chr3_1:49292793-49292812 Msa0360320:intron 25.0%
! TTGCAAACATGTTAAAAGTT+GGG - chr3_1:49292842-49292861 None:intergenic 25.0%
! TTTGCAAACATGTTAAAAGT+TGG - chr3_1:49292843-49292862 None:intergenic 25.0%
!! TTTACTGTAGTTGATTCATT+AGG + chr3_1:49292968-49292987 Msa0360320:intron 25.0%
!! CTTTTAGTGCTAATTAAAAG+AGG - chr3_1:49293548-49293567 None:intergenic 25.0%
! AATTACAAATCTACCATTCT+AGG - chr3_1:49293671-49293690 None:intergenic 25.0%
!!! ATTTTTTATGCTTTAGATGG+TGG + chr3_1:49293948-49293967 Msa0360320:intron 25.0%
!!! TTTTTTATGCTTTAGATGGT+GGG + chr3_1:49293949-49293968 Msa0360320:intron 25.0%
!! AGTACTTTATCATTTAAGAC+AGG - chr3_1:49294155-49294174 None:intergenic 25.0%
! ATTTATTATTGACAGATCCA+TGG - chr3_1:49294358-49294377 None:intergenic 25.0%
! AAGTCAAGAACTGATTATTT+GGG - chr3_1:49294694-49294713 None:intergenic 25.0%
!!! AGATGTTTTAACAACTTTAC+AGG + chr3_1:49294746-49294765 Msa0360320:intron 25.0%
! CAAGATTTATCTATATCATC+TGG + chr3_1:49294852-49294871 Msa0360320:CDS 25.0%
! TTGAAAGTTCGTTAATTACA+GGG - chr3_1:49295526-49295545 None:intergenic 25.0%
! TGTTTAATATCTGTTTGTCT+TGG + chr3_1:49295603-49295622 Msa0360320:CDS 25.0%
! ACATATTCTGACTAATAAAG+AGG - chr3_1:49295660-49295679 None:intergenic 25.0%
! AATTGACATAGCATTATTGA+AGG + chr3_1:49295832-49295851 Msa0360320:intron 25.0%
! ATTGACATAGCATTATTGAA+GGG + chr3_1:49295833-49295852 Msa0360320:intron 25.0%
! GTTTAATTAATTTCGAAACC+AGG + chr3_1:49295872-49295891 Msa0360320:intron 25.0%
!!! AAACACTAATTTTGAGACAT+AGG - chr3_1:49295902-49295921 None:intergenic 25.0%
!! ATCTATCGTTTAAAATCATC+AGG - chr3_1:49295931-49295950 None:intergenic 25.0%
!!! ATTTTGTTATGTTTAGTTGG+AGG + chr3_1:49295972-49295991 Msa0360320:intron 25.0%
! GAACTAATCATAGAAACTTA+AGG - chr3_1:49296082-49296101 None:intergenic 25.0%
! CAATACAATACAATACAGTA+GGG - chr3_1:49296443-49296462 None:intergenic 25.0%
! ACAATACAATACAATACAGT+AGG - chr3_1:49296444-49296463 None:intergenic 25.0%
!!! TTGTTTTGCTAGTCATAATA+TGG + chr3_1:49296525-49296544 Msa0360320:intron 25.0%
! AAGGTAAGATTCTATTAATC+TGG - chr3_1:49296647-49296666 None:intergenic 25.0%
! AATAAAGTTCAGAACGTTAT+TGG + chr3_1:49296691-49296710 Msa0360320:intron 25.0%
! GATATAAACTTGGCAAAAAA+AGG - chr3_1:49296828-49296847 None:intergenic 25.0%
! ATATATGCTATTCAGGTATT+AGG + chr3_1:49297186-49297205 Msa0360320:three_prime_UTR 25.0%
!!! GATTTTCAAGTGATGAAATG+AGG - chr3_1:49290323-49290342 None:intergenic 30.0%
!! TTTGTGTTCTTCATTTTTGG+GGG - chr3_1:49290481-49290500 None:intergenic 30.0%
!! GGTTTTGTGTTCTTCATTTT+TGG - chr3_1:49290484-49290503 None:intergenic 30.0%
TAGTTCAACCATTGCTAAAT+GGG - chr3_1:49290551-49290570 None:intergenic 30.0%
TTAGTTCAACCATTGCTAAA+TGG - chr3_1:49290552-49290571 None:intergenic 30.0%
!!! TAACCCTAATTTTTTGGCTA+AGG + chr3_1:49291143-49291162 Msa0360320:CDS 30.0%
TAAACTCATCAGTCAATGAT+TGG - chr3_1:49291322-49291341 None:intergenic 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr3_1:49291561-49291580 None:intergenic 30.0%
AATTCCTAATCTATGAAGCA+CGG - chr3_1:49291659-49291678 None:intergenic 30.0%
AATGCAATTCCTACCAATTA+AGG - chr3_1:49291686-49291705 None:intergenic 30.0%
TAATTGGTAGGAATTGCATT+AGG + chr3_1:49291686-49291705 Msa0360320:intron 30.0%
TAGGAACTAACCTATAAAAG+TGG + chr3_1:49291792-49291811 Msa0360320:intron 30.0%
GATTAATTTCTGTGCATTGA+TGG - chr3_1:49291870-49291889 None:intergenic 30.0%
TAAACAATGCAGAGATTAAG+TGG + chr3_1:49291995-49292014 Msa0360320:intron 30.0%
!!! TGAATCAGTTTTTTGCAATG+AGG + chr3_1:49292033-49292052 Msa0360320:intron 30.0%
TAAGATTTACTTACAAGAGG+GGG + chr3_1:49292140-49292159 Msa0360320:intron 30.0%
CACTAACATTGCATTTACAA+AGG + chr3_1:49292216-49292235 Msa0360320:intron 30.0%
TCAGATATAATTGGACCAAA+GGG - chr3_1:49292271-49292290 None:intergenic 30.0%
TTCAGATATAATTGGACCAA+AGG - chr3_1:49292272-49292291 None:intergenic 30.0%
GATATGAAGCGGAAAAATAA+TGG - chr3_1:49292394-49292413 None:intergenic 30.0%
! CACCATACTATCTGAAATTT+AGG + chr3_1:49292648-49292667 Msa0360320:intron 30.0%
GAATGAAAGTTGTGTTTAAG+TGG + chr3_1:49292919-49292938 Msa0360320:intron 30.0%
ATTAATCGAGTATCAATTGC+AGG + chr3_1:49293074-49293093 Msa0360320:intron 30.0%
TAAGAAATGGTAAGATGATG+TGG - chr3_1:49293380-49293399 None:intergenic 30.0%
! AATGTGCTATCAATTTTCTG+CGG - chr3_1:49293581-49293600 None:intergenic 30.0%
GAGAATTATTTGTCCTAGAA+TGG + chr3_1:49293655-49293674 Msa0360320:intron 30.0%
AAGAACATTTCATTTGTCTG+TGG + chr3_1:49293880-49293899 Msa0360320:intron 30.0%
AAAATGTAAATCCTGATGAG+AGG + chr3_1:49294012-49294031 Msa0360320:CDS 30.0%
AAACACGGATTCAAATTCTA+AGG + chr3_1:49294076-49294095 Msa0360320:CDS 30.0%
! ACTTTATCATTTAAGACAGG+TGG - chr3_1:49294152-49294171 None:intergenic 30.0%
!!! CAAGGTTTTGGAAAAATTCT+GGG - chr3_1:49294181-49294200 None:intergenic 30.0%
!!! TCAAGGTTTTGGAAAAATTC+TGG - chr3_1:49294182-49294201 None:intergenic 30.0%
! TTTTCCAAAACCTTGAAAGA+AGG + chr3_1:49294186-49294205 Msa0360320:CDS 30.0%
TTTCCAAAACCTTGAAAGAA+GGG + chr3_1:49294187-49294206 Msa0360320:CDS 30.0%
TGTTCTTTCGTTTGAATCTT+TGG - chr3_1:49294303-49294322 None:intergenic 30.0%
AAATATCATGGTTTAGAGAG+AGG + chr3_1:49294374-49294393 Msa0360320:CDS 30.0%
! ATGATGGAAATTCAAGACAA+AGG + chr3_1:49294399-49294418 Msa0360320:CDS 30.0%
TCTAGAAAAACCTGCAATAT+TGG - chr3_1:49294543-49294562 None:intergenic 30.0%
GAAGTCAAGAACTGATTATT+TGG - chr3_1:49294695-49294714 None:intergenic 30.0%
AACAACTTTACAGGATTTCA+TGG + chr3_1:49294755-49294774 Msa0360320:intron 30.0%
ACAACTTTACAGGATTTCAT+GGG + chr3_1:49294756-49294775 Msa0360320:intron 30.0%
! AAACCATTATACTTGCTAGA+AGG - chr3_1:49294906-49294925 None:intergenic 30.0%
GAATATTCCAATTCCAAGTA+TGG + chr3_1:49294930-49294949 Msa0360320:CDS 30.0%
GGGTAAACCTTTCATTAAAT+GGG - chr3_1:49294977-49294996 None:intergenic 30.0%
TGGGTAAACCTTTCATTAAA+TGG - chr3_1:49294978-49294997 None:intergenic 30.0%
CTTGAAAGTTCGTTAATTAC+AGG - chr3_1:49295527-49295546 None:intergenic 30.0%
AAGTCAAAACTAGCAAAGTT+TGG + chr3_1:49295781-49295800 Msa0360320:intron 30.0%
TAGGAATAAAGAGTAAAGAC+AGG + chr3_1:49296014-49296033 Msa0360320:intron 30.0%
AATAAAGAGTAAAGACAGGT+GGG + chr3_1:49296018-49296037 Msa0360320:intron 30.0%
!! ATTGCTGTTACTATTTTGCA+AGG + chr3_1:49296117-49296136 Msa0360320:intron 30.0%
!! TTGCTGTTACTATTTTGCAA+GGG + chr3_1:49296118-49296137 Msa0360320:intron 30.0%
GTTTATTGGATCTAGGAAAA+AGG - chr3_1:49296234-49296253 None:intergenic 30.0%
TTATTCACCCATGAGTTTAT+TGG - chr3_1:49296248-49296267 None:intergenic 30.0%
!! GTGGAGGTATTATTTGAAAA+TGG + chr3_1:49296897-49296916 Msa0360320:CDS 30.0%
! AACTGCAATAAAAGTTGATC+TGG - chr3_1:49297023-49297042 None:intergenic 30.0%
! AGATCAACTTTTATTGCAGT+TGG + chr3_1:49297022-49297041 Msa0360320:CDS 30.0%
!!! TGTCACATTTTAACTTGAGT+TGG + chr3_1:49297119-49297138 Msa0360320:three_prime_UTR 30.0%
!!! GTCACATTTTAACTTGAGTT+GGG + chr3_1:49297120-49297139 Msa0360320:three_prime_UTR 30.0%
!!! TCACATTTTAACTTGAGTTG+GGG + chr3_1:49297121-49297140 Msa0360320:three_prime_UTR 30.0%
TACACTCACTAAAACTATCA+AGG - chr3_1:49297154-49297173 None:intergenic 30.0%
! CCATTGTAATTTTTACTTGC+AGG - chr3_1:49297212-49297231 None:intergenic 30.0%
CCTGCAAGTAAAAATTACAA+TGG + chr3_1:49297209-49297228 Msa0360320:three_prime_UTR 30.0%
GGATATCGTCATTATTACTA+AGG + chr3_1:49297295-49297314 Msa0360320:three_prime_UTR 30.0%
TTACTAAGGTAGTATGTTTC+TGG + chr3_1:49297309-49297328 Msa0360320:three_prime_UTR 30.0%
! TGATTTTAAACACCCTAGTT+AGG - chr3_1:49297344-49297363 None:intergenic 30.0%
CTTAAACGAGTGTAATTACA+AGG - chr3_1:49297402-49297421 None:intergenic 30.0%
TGATGAAATGAGGATGATGA+TGG - chr3_1:49290313-49290332 None:intergenic 35.0%
!! TGTGATTTTGAGTGTAATGG+TGG - chr3_1:49290415-49290434 None:intergenic 35.0%
!! GAGTGTGATTTTGAGTGTAA+TGG - chr3_1:49290418-49290437 None:intergenic 35.0%
!! TTGTGTTCTTCATTTTTGGG+GGG - chr3_1:49290480-49290499 None:intergenic 35.0%
!! TCTTGAAGATGGTGTTGATT+GGG - chr3_1:49290512-49290531 None:intergenic 35.0%
!! ATCTTGAAGATGGTGTTGAT+TGG - chr3_1:49290513-49290532 None:intergenic 35.0%
AGTGATGAAGATCTTGAAGA+TGG - chr3_1:49290523-49290542 None:intergenic 35.0%
ACTATCTTCCCATTTAGCAA+TGG + chr3_1:49290540-49290559 Msa0360320:CDS 35.0%
!! AGAGATTCGTTTTTGATGGA+GGG - chr3_1:49290727-49290746 None:intergenic 35.0%
!! TATGAGAAATGATTTTGGGG+AGG - chr3_1:49290801-49290820 None:intergenic 35.0%
TCAGAGGAGAGAATAACAAT+GGG + chr3_1:49290902-49290921 Msa0360320:CDS 35.0%
CTGCCTTAGCCAAAAAATTA+GGG - chr3_1:49291149-49291168 None:intergenic 35.0%
TGATGTGACAACACATGATT+GGG - chr3_1:49291386-49291405 None:intergenic 35.0%
ATGATGTGACAACACATGAT+TGG - chr3_1:49291387-49291406 None:intergenic 35.0%
TAATCTATGAAGCACGGATA+TGG - chr3_1:49291653-49291672 None:intergenic 35.0%
ATATCCGTGCTTCATAGATT+AGG + chr3_1:49291652-49291671 Msa0360320:intron 35.0%
AGAACAGGAACCAAATGAAT+TGG + chr3_1:49292690-49292709 Msa0360320:intron 35.0%
CTACCTTAGAGTGATATACA+AGG + chr3_1:49292866-49292885 Msa0360320:intron 35.0%
TTGCCTTGTATATCACTCTA+AGG - chr3_1:49292872-49292891 None:intergenic 35.0%
CTCAAGAAACAAATATGGCA+TGG - chr3_1:49293341-49293360 None:intergenic 35.0%
AGCGACTCAAGAAACAAATA+TGG - chr3_1:49293346-49293365 None:intergenic 35.0%
TCATGTCCTCAAGACATAAA+AGG + chr3_1:49293464-49293483 Msa0360320:intron 35.0%
! ATGTGCTATCAATTTTCTGC+GGG - chr3_1:49293580-49293599 None:intergenic 35.0%
!! ACAAAAGTATCACATGAGTC+AGG + chr3_1:49293629-49293648 Msa0360320:intron 35.0%
!! CAAAAGTATCACATGAGTCA+GGG + chr3_1:49293630-49293649 Msa0360320:intron 35.0%
ACCTGTGGAAAAAAATTGCA+GGG + chr3_1:49293812-49293831 Msa0360320:CDS 35.0%
TGGAAAAAAATTGCAGGGAA+AGG + chr3_1:49293817-49293836 Msa0360320:CDS 35.0%
ATGTTCTTACCAGATGACAA+TGG - chr3_1:49293868-49293887 None:intergenic 35.0%
AAGAGAAACCATGACAAAAG+TGG - chr3_1:49293921-49293940 None:intergenic 35.0%
! GTTGATAAATCCTTCACTGA+TGG - chr3_1:49294047-49294066 None:intergenic 35.0%
ATCAACCAGTTCTTCAAACA+CGG + chr3_1:49294061-49294080 Msa0360320:CDS 35.0%
!! TTCAAATTCTAAGGCCAAAG+CGG + chr3_1:49294085-49294104 Msa0360320:CDS 35.0%
TGTTTGAGCTTGAAGAATTG+AGG - chr3_1:49294256-49294275 None:intergenic 35.0%
AAACAATGACGAAGAGTCAA+AGG + chr3_1:49294271-49294290 Msa0360320:CDS 35.0%
GAATTATGAAGACTTTGCTC+AGG + chr3_1:49294421-49294440 Msa0360320:CDS 35.0%
GAATGAATGCAAAAGAACTG+AGG + chr3_1:49294462-49294481 Msa0360320:CDS 35.0%
AAGCTAACGATACAATTGAC+AGG + chr3_1:49294489-49294508 Msa0360320:CDS 35.0%
TTTCCTCTGTTATTGGAGAA+GGG - chr3_1:49294587-49294606 None:intergenic 35.0%
!! ATGCTGCAGGTATGTTTTTA+TGG + chr3_1:49294668-49294687 Msa0360320:intron 35.0%
AAAGGTTTACCCAAACTGAT+GGG + chr3_1:49294985-49295004 Msa0360320:CDS 35.0%
! TTCTAAAGATGAAGCTACCT+TGG + chr3_1:49295262-49295281 Msa0360320:CDS 35.0%
ATCTATATCACCTGCTTGAA+GGG - chr3_1:49295435-49295454 None:intergenic 35.0%
AATCTATATCACCTGCTTGA+AGG - chr3_1:49295436-49295455 None:intergenic 35.0%
TCGTTTGCTTGTAAAGCTAA+TGG + chr3_1:49295490-49295509 Msa0360320:CDS 35.0%
! GTAAAGCTAATGGATAGAAC+TGG + chr3_1:49295500-49295519 Msa0360320:CDS 35.0%
! TTCATACTATATTTGGGACG+TGG - chr3_1:49295727-49295746 None:intergenic 35.0%
GAATAAAGAGTAAAGACAGG+TGG + chr3_1:49296017-49296036 Msa0360320:intron 35.0%
TGGGTTCATTATAGGAAGAA+GGG + chr3_1:49296037-49296056 Msa0360320:intron 35.0%
TCCTAGATCCAATAAACTCA+TGG + chr3_1:49296237-49296256 Msa0360320:intron 35.0%
CCTAGATCCAATAAACTCAT+GGG + chr3_1:49296238-49296257 Msa0360320:intron 35.0%
ACTTCAAAGGGATAGAGAAA+CGG - chr3_1:49296273-49296292 None:intergenic 35.0%
AGCAATTGGTGAACTTCAAA+GGG - chr3_1:49296285-49296304 None:intergenic 35.0%
TAGCAATTGGTGAACTTCAA+AGG - chr3_1:49296286-49296305 None:intergenic 35.0%
! TTTGAAGTTCACCAATTGCT+AGG + chr3_1:49296285-49296304 Msa0360320:intron 35.0%
CGTAACAAACTTTCCTTTGA+GGG - chr3_1:49296562-49296581 None:intergenic 35.0%
!! CCTCAAAGGAAAGTTTGTTA+CGG + chr3_1:49296560-49296579 Msa0360320:intron 35.0%
CAACGAAACTTCATCAGAAA+AGG - chr3_1:49296610-49296629 None:intergenic 35.0%
TTCTTCACTTGTTTAGCACT+TGG + chr3_1:49296763-49296782 Msa0360320:intron 35.0%
TCTTCACTTGTTTAGCACTT+GGG + chr3_1:49296764-49296783 Msa0360320:intron 35.0%
AGGAAAGCAAATGCAGAATT+GGG - chr3_1:49296808-49296827 None:intergenic 35.0%
AAGGAAAGCAAATGCAGAAT+TGG - chr3_1:49296809-49296828 None:intergenic 35.0%
TCGTGATCATAATGTTCAGT+TGG + chr3_1:49296875-49296894 Msa0360320:intron 35.0%
TGATCATAATGTTCAGTTGG+TGG + chr3_1:49296878-49296897 Msa0360320:intron 35.0%
! TGCAATAAAAGTTGATCTGG+TGG - chr3_1:49297020-49297039 None:intergenic 35.0%
TCTACAACAGCATGACAAAT+AGG + chr3_1:49297064-49297083 Msa0360320:CDS 35.0%
TCGGAGAGATGTTTGATATT+TGG + chr3_1:49297274-49297293 Msa0360320:three_prime_UTR 35.0%
!! GAAATGAGGATGATGATGGA+AGG - chr3_1:49290309-49290328 None:intergenic 40.0%
!!! TAAGGTTGCTTGTTTTGGTG+GGG - chr3_1:49290372-49290391 None:intergenic 40.0%
!!! GTAAGGTTGCTTGTTTTGGT+GGG - chr3_1:49290373-49290392 None:intergenic 40.0%
! TGAGGTAAGGTTGCTTGTTT+TGG - chr3_1:49290377-49290396 None:intergenic 40.0%
AGTAGAGTTTGGATGAGGTA+AGG - chr3_1:49290390-49290409 None:intergenic 40.0%
! TAATGGTGGTGAGTAGAGTT+TGG - chr3_1:49290401-49290420 None:intergenic 40.0%
GAATCGGAATGTGAGTGAAA+AGG - chr3_1:49290454-49290473 None:intergenic 40.0%
!! AGATGGTGTTGATTGGGTTT+GGG - chr3_1:49290506-49290525 None:intergenic 40.0%
!! AAGATGGTGTTGATTGGGTT+TGG - chr3_1:49290507-49290526 None:intergenic 40.0%
AAGATCATTGGAATAGCGTC+TGG - chr3_1:49290670-49290689 None:intergenic 40.0%
! CGTTTTTGATGGAGGGTTTA+GGG - chr3_1:49290720-49290739 None:intergenic 40.0%
!! TCGTTTTTGATGGAGGGTTT+AGG - chr3_1:49290721-49290740 None:intergenic 40.0%
!! GAGAGATTCGTTTTTGATGG+AGG - chr3_1:49290728-49290747 None:intergenic 40.0%
! CATTGTTATTCTCTCCTCTG+AGG - chr3_1:49290903-49290922 None:intergenic 40.0%
CTCAGAGGAGAGAATAACAA+TGG + chr3_1:49290901-49290920 Msa0360320:CDS 40.0%
AATGGGAGCAATGTGAGTAA+TGG + chr3_1:49290919-49290938 Msa0360320:CDS 40.0%
ATGGGAGCAATGTGAGTAAT+GGG + chr3_1:49290920-49290939 Msa0360320:CDS 40.0%
! AGCAATGTGAGTAATGGGAA+TGG + chr3_1:49290925-49290944 Msa0360320:CDS 40.0%
! GAGTAATGGGAATGGTTCTT+TGG + chr3_1:49290933-49290952 Msa0360320:CDS 40.0%
AATGGGAATGGTTCTTTGGT+TGG + chr3_1:49290937-49290956 Msa0360320:CDS 40.0%
GCTGCCTTAGCCAAAAAATT+AGG - chr3_1:49291150-49291169 None:intergenic 40.0%
TATCTGCATTGTCTCAGGTT+TGG + chr3_1:49291184-49291203 Msa0360320:intron 40.0%
!! TGTCTCAGGTTTGGTGAATT+TGG + chr3_1:49291193-49291212 Msa0360320:intron 40.0%
ACAATGTGGTGAGACTCAAT+TGG + chr3_1:49291447-49291466 Msa0360320:intron 40.0%
CTTCACAATGTAGGTGCATT+AGG + chr3_1:49291487-49291506 Msa0360320:intron 40.0%
GGTGCATTAGGATTTGCATT+AGG + chr3_1:49291499-49291518 Msa0360320:intron 40.0%
GCATTAGGAACTATGAAGCA+CGG + chr3_1:49291514-49291533 Msa0360320:intron 40.0%
!! GTAATTACAAGTGTCGGTGT+CGG - chr3_1:49291555-49291574 None:intergenic 40.0%
CCAATCAAATCACACCAAAG+TGG - chr3_1:49291823-49291842 None:intergenic 40.0%
! CCACTTTGGTGTGATTTGAT+TGG + chr3_1:49291820-49291839 Msa0360320:intron 40.0%
! GTGTTTAGAGTTTCACCCTT+TGG + chr3_1:49292253-49292272 Msa0360320:intron 40.0%
!! TCAGAATAGTGGGTTCTCAT+CGG + chr3_1:49292453-49292472 Msa0360320:intron 40.0%
ATCGGATACATGTGTAGAGT+TGG + chr3_1:49292471-49292490 Msa0360320:intron 40.0%
TTTAGGTAGCCTTTGTCGAA+TGG + chr3_1:49292665-49292684 Msa0360320:intron 40.0%
CTGTTCTTTCCATTCGACAA+AGG - chr3_1:49292677-49292696 None:intergenic 40.0%
CTTTGTCGAATGGAAAGAAC+AGG + chr3_1:49292675-49292694 Msa0360320:intron 40.0%
AGCAAATTGTCCAAGCTTTG+TGG - chr3_1:49293114-49293133 None:intergenic 40.0%
TGACATTACTTGAGGCTTGT+CGG + chr3_1:49293256-49293275 Msa0360320:CDS 40.0%
!!! TCTTGAGTCGCTTGTTTTGA+AGG + chr3_1:49293354-49293373 Msa0360320:intron 40.0%
TGTCCTCAAGACATAAAAGG+AGG + chr3_1:49293467-49293486 Msa0360320:intron 40.0%
ATTGCAGATAAGACCTGTGA+GGG + chr3_1:49293768-49293787 Msa0360320:intron 40.0%
GACCTGTGGAAAAAAATTGC+AGG + chr3_1:49293811-49293830 Msa0360320:CDS 40.0%
!!! TCCCTGCAATTTTTTTCCAC+AGG - chr3_1:49293816-49293835 None:intergenic 40.0%
AAAATTGCAGGGAAAGGAGA+TGG + chr3_1:49293823-49293842 Msa0360320:CDS 40.0%
GATTCAAAGCCATTGTCATC+TGG + chr3_1:49293856-49293875 Msa0360320:CDS 40.0%
TGACAAAAGTGGTTCGAGAT+TGG - chr3_1:49293910-49293929 None:intergenic 40.0%
!! ATCTCGAACCACTTTTGTCA+TGG + chr3_1:49293910-49293929 Msa0360320:intron 40.0%
CTAGTTTCTGTCAAAACAGC+TGG - chr3_1:49293984-49294003 None:intergenic 40.0%
TGAATCCGTGTTTGAAGAAC+TGG - chr3_1:49294069-49294088 None:intergenic 40.0%
! AGTCCCTTCTTTCAAGGTTT+TGG - chr3_1:49294193-49294212 None:intergenic 40.0%
CATCTAAGTCCCTTCTTTCA+AGG - chr3_1:49294199-49294218 None:intergenic 40.0%
GGACTTAGATGATTTACCAG+TGG + chr3_1:49294208-49294227 Msa0360320:CDS 40.0%
AGATGATTTACCAGTGGAAG+TGG + chr3_1:49294214-49294233 Msa0360320:CDS 40.0%
AACGAAAGAACAAATGCCAC+TGG + chr3_1:49294311-49294330 Msa0360320:CDS 40.0%
ATCATTAGGCACATTTCCAG+TGG - chr3_1:49294330-49294349 None:intergenic 40.0%
ACTGGAAATGTGCCTAATGA+TGG + chr3_1:49294329-49294348 Msa0360320:CDS 40.0%
GGTTTAGAGAGAGGTAATGA+TGG + chr3_1:49294383-49294402 Msa0360320:CDS 40.0%
ACAGGTCTGAAAATGATCAG+AGG + chr3_1:49294507-49294526 Msa0360320:CDS 40.0%
CAGGTCTGAAAATGATCAGA+GGG + chr3_1:49294508-49294527 Msa0360320:CDS 40.0%
TCTGAAAATGATCAGAGGGA+TGG + chr3_1:49294512-49294531 Msa0360320:CDS 40.0%
GTTTCCTCTGTTATTGGAGA+AGG - chr3_1:49294588-49294607 None:intergenic 40.0%
CAGCAAGTTTCCTCTGTTAT+TGG - chr3_1:49294594-49294613 None:intergenic 40.0%
CAATAACAGAGGAAACTTGC+TGG + chr3_1:49294592-49294611 Msa0360320:CDS 40.0%
ACTTTACAGGATTTCATGGG+TGG + chr3_1:49294759-49294778 Msa0360320:intron 40.0%
TCCAATTCCAAGTATGGAAG+AGG + chr3_1:49294936-49294955 Msa0360320:CDS 40.0%
ACCTCTTCCATACTTGGAAT+TGG - chr3_1:49294940-49294959 None:intergenic 40.0%
AATTCCAAGTATGGAAGAGG+TGG + chr3_1:49294939-49294958 Msa0360320:CDS 40.0%
GACGCATCCCATTTAATGAA+AGG + chr3_1:49294967-49294986 Msa0360320:CDS 40.0%
GAAAGGTTTACCCAAACTGA+TGG + chr3_1:49294984-49295003 Msa0360320:CDS 40.0%
! CAAAGCATTCCCATCAGTTT+GGG - chr3_1:49294997-49295016 None:intergenic 40.0%
CAAACTGATGGGAATGCTTT+GGG + chr3_1:49294996-49295015 Msa0360320:CDS 40.0%
AAACTGATGGGAATGCTTTG+GGG + chr3_1:49294997-49295016 Msa0360320:CDS 40.0%
! ATTTCCTCAAGAAGGGCTTT+TGG + chr3_1:49295104-49295123 Msa0360320:CDS 40.0%
! TTTGGTGGTAGTTCTGTTGA+TGG + chr3_1:49295122-49295141 Msa0360320:CDS 40.0%
ATCACCAAAATCAGTGCATG+AGG + chr3_1:49295148-49295167 Msa0360320:CDS 40.0%
TCACCAAAATCAGTGCATGA+GGG + chr3_1:49295149-49295168 Msa0360320:CDS 40.0%
AAGCTACCTTGGAAGCAATT+CGG + chr3_1:49295273-49295292 Msa0360320:CDS 40.0%
TTGCTTCAGCAGTCATTTCA+GGG - chr3_1:49295346-49295365 None:intergenic 40.0%
ATTGCTTCAGCAGTCATTTC+AGG - chr3_1:49295347-49295366 None:intergenic 40.0%
TGAAATGACTGCTGAAGCAA+TGG + chr3_1:49295346-49295365 Msa0360320:CDS 40.0%
TATAGATTCAGCCTTTGCAG+AGG + chr3_1:49295448-49295467 Msa0360320:CDS 40.0%
TACAAGCAAACGATCATCTC+CGG - chr3_1:49295483-49295502 None:intergenic 40.0%
CTGTTTGTCTTGGATTCAAC+AGG + chr3_1:49295613-49295632 Msa0360320:CDS 40.0%
TGTCTTGGATTCAACAGGTA+TGG + chr3_1:49295618-49295637 Msa0360320:intron 40.0%
!!! TTTTGAGACATAGGAATGCC+TGG - chr3_1:49295893-49295912 None:intergenic 40.0%
GTTATGTTTAGTTGGAGGAC+TGG + chr3_1:49295977-49295996 Msa0360320:intron 40.0%
ACTGGCATACTGTTAGGAAT+AGG + chr3_1:49295995-49296014 Msa0360320:intron 40.0%
! AAGACAGGTGGGTTCATTAT+AGG + chr3_1:49296029-49296048 Msa0360320:intron 40.0%
GTGGGTTCATTATAGGAAGA+AGG + chr3_1:49296036-49296055 Msa0360320:intron 40.0%
AACTTCCTAATCCTCCAAAG+AGG - chr3_1:49296153-49296172 None:intergenic 40.0%
TAGAGAAAGCTGTAGTGTGA+GGG + chr3_1:49296187-49296206 Msa0360320:intron 40.0%
CCCATGAGTTTATTGGATCT+AGG - chr3_1:49296241-49296260 None:intergenic 40.0%
CTTCAAAGGGATAGAGAAAC+GGG - chr3_1:49296272-49296291 None:intergenic 40.0%
GGATGCATCAGCATATAGAA+AGG - chr3_1:49296422-49296441 None:intergenic 40.0%
! GGTATCAGATTTTCCCTCAA+AGG + chr3_1:49296546-49296565 Msa0360320:intron 40.0%
CCGTAACAAACTTTCCTTTG+AGG - chr3_1:49296563-49296582 None:intergenic 40.0%
! AGAAAAGGCACAACGGAAAA+CGG - chr3_1:49296595-49296614 None:intergenic 40.0%
! CTTCATCAGAAAAGGCACAA+CGG - chr3_1:49296602-49296621 None:intergenic 40.0%
!! TCATAATGTTCAGTTGGTGG+AGG + chr3_1:49296881-49296900 Msa0360320:intron 40.0%
AGATCTTCCTTCACTTCCAT+GGG - chr3_1:49296942-49296961 None:intergenic 40.0%
AAGTGAAGGAAGATCTCTTG+CGG + chr3_1:49296946-49296965 Msa0360320:CDS 40.0%
! CTTTTATTGCAGTTGGCATC+AGG + chr3_1:49297029-49297048 Msa0360320:CDS 40.0%
ATGCAGCAAAAAAAGGAGCA+TGG - chr3_1:49297242-49297261 None:intergenic 40.0%
!!! CTCCTTTTTTTGCTGCATCT+TGG + chr3_1:49297244-49297263 Msa0360320:three_prime_UTR 40.0%
CACCAAGATGCAGCAAAAAA+AGG - chr3_1:49297249-49297268 None:intergenic 40.0%
TGGTTGTCAATGCCTAACTA+GGG + chr3_1:49297329-49297348 Msa0360320:three_prime_UTR 40.0%
TGAAGATGATCACGCATTGT+TGG + chr3_1:49297432-49297451 Msa0360320:three_prime_UTR 40.0%
GCATTGTTGGATACTGGATA+TGG + chr3_1:49297445-49297464 Msa0360320:three_prime_UTR 40.0%
GAAGGAAAAGCTAGATCTGC+GGG - chr3_1:49290291-49290310 None:intergenic 45.0%
GGAAGGAAAAGCTAGATCTG+CGG - chr3_1:49290292-49290311 None:intergenic 45.0%
!!! GGTAAGGTTGCTTGTTTTGG+TGG - chr3_1:49290374-49290393 None:intergenic 45.0%
TGGTGAGTAGAGTTTGGATG+AGG - chr3_1:49290395-49290414 None:intergenic 45.0%
!! CATTTTTGGGGGGTGAGAAT+CGG - chr3_1:49290470-49290489 None:intergenic 45.0%
!! GATGGTGTTGATTGGGTTTG+GGG - chr3_1:49290505-49290524 None:intergenic 45.0%
!!! GTCGGAGAGTTTTGAAAGAG+AGG - chr3_1:49290590-49290609 None:intergenic 45.0%
! TTTGATGGAGGGTTTAGGGT+CGG - chr3_1:49290716-49290735 None:intergenic 45.0%
!! GCGGAGAGATTCGTTTTTGA+TGG - chr3_1:49290731-49290750 None:intergenic 45.0%
AAGAGCAGACGAAGGATAAG+AGG - chr3_1:49290753-49290772 None:intergenic 45.0%
!! GAAATGATTTTGGGGAGGTG+AGG - chr3_1:49290796-49290815 None:intergenic 45.0%
ATTGCTGCTCTTTACCTCAG+AGG + chr3_1:49290886-49290905 Msa0360320:CDS 45.0%
GTTTGTGAAGCCGTTGTTTG+AGG + chr3_1:49290963-49290982 Msa0360320:CDS 45.0%
GAACAGAATAAGGCTGTGCA+GGG + chr3_1:49290994-49291013 Msa0360320:CDS 45.0%
AGCGGTTTGTATGGCGAAAA+TGG + chr3_1:49291023-49291042 Msa0360320:CDS 45.0%
GGTTTGTATGGCGAAAATGG+TGG + chr3_1:49291026-49291045 Msa0360320:CDS 45.0%
! GGCGAAAATGGTGGAAATGA+CGG + chr3_1:49291035-49291054 Msa0360320:CDS 45.0%
CGTTTCAGAAGATGTGTCCT+AGG + chr3_1:49291103-49291122 Msa0360320:CDS 45.0%
TGAGACAATGCAGATACCAC+AGG - chr3_1:49291180-49291199 None:intergenic 45.0%
TGTGGTATCTGCATTGTCTC+AGG + chr3_1:49291179-49291198 Msa0360320:CDS 45.0%
TATGAAGCACGGACACTTCT+CGG + chr3_1:49291525-49291544 Msa0360320:intron 45.0%
ATGAAGCACGGATATGGACA+CGG - chr3_1:49291647-49291666 None:intergenic 45.0%
!!! AGTGGCAGTGCCACTTTTAT+AGG - chr3_1:49291805-49291824 None:intergenic 45.0%
! TAAAAGTGGCACTGCCACTT+TGG + chr3_1:49291806-49291825 Msa0360320:intron 45.0%
ATCGAGTATCAATTGCAGGC+TGG + chr3_1:49293078-49293097 Msa0360320:intron 45.0%
TCGAGTATCAATTGCAGGCT+GGG + chr3_1:49293079-49293098 Msa0360320:intron 45.0%
ACTGCTTGAATGCAAAGCCA+AGG - chr3_1:49293208-49293227 None:intergenic 45.0%
GCCTCAAGTAATGTCACTGT+GGG - chr3_1:49293252-49293271 None:intergenic 45.0%
AGCCTCAAGTAATGTCACTG+TGG - chr3_1:49293253-49293272 None:intergenic 45.0%
GACATTACTTGAGGCTTGTC+GGG + chr3_1:49293257-49293276 Msa0360320:CDS 45.0%
CCTCAAGACATAAAAGGAGG+CGG + chr3_1:49293470-49293489 Msa0360320:intron 45.0%
GATTGCAGATAAGACCTGTG+AGG + chr3_1:49293767-49293786 Msa0360320:intron 45.0%
! TCTGTCAAAACAGCTGGTTC+AGG - chr3_1:49293978-49293997 None:intergenic 45.0%
GAAGACTGATCCATCAGTGA+AGG + chr3_1:49294034-49294053 Msa0360320:CDS 45.0%
! GAAGAATTGAGGCATTTGCG+AGG - chr3_1:49294245-49294264 None:intergenic 45.0%
GATCCATGGAAGCCATCATT+AGG - chr3_1:49294344-49294363 None:intergenic 45.0%
! GATGGTTCTGCCAATATTGC+AGG + chr3_1:49294530-49294549 Msa0360320:CDS 45.0%
!!! GCAGGTTTTTCTAGAGCTGA+TGG + chr3_1:49294548-49294567 Msa0360320:CDS 45.0%
GTACCCTTCTCCAATAACAG+AGG + chr3_1:49294581-49294600 Msa0360320:CDS 45.0%
CTGTGTTAACTGTCTCTGGA+TGG - chr3_1:49294618-49294637 None:intergenic 45.0%
AACACAGCTCGAAAGACAAC+AGG + chr3_1:49294631-49294650 Msa0360320:CDS 45.0%
TCATCTGATGAACATGCTGC+AGG + chr3_1:49294655-49294674 Msa0360320:CDS 45.0%
! ACTCTAGAGAACAGAGTACG+AGG + chr3_1:49294801-49294820 Msa0360320:CDS 45.0%
CGGCCTTCTAGCAAGTATAA+TGG + chr3_1:49294900-49294919 Msa0360320:CDS 45.0%
ATCACCACCTCTTCCATACT+TGG - chr3_1:49294946-49294965 None:intergenic 45.0%
AAGTATGGAAGAGGTGGTGA+TGG + chr3_1:49294945-49294964 Msa0360320:CDS 45.0%
! CCAAAGCATTCCCATCAGTT+TGG - chr3_1:49294998-49295017 None:intergenic 45.0%
CCAAACTGATGGGAATGCTT+TGG + chr3_1:49294995-49295014 Msa0360320:CDS 45.0%
!! TTTCTAGAAGCACCATACCC+AGG - chr3_1:49295077-49295096 None:intergenic 45.0%
! GGGTATGGTGCTTCTAGAAA+TGG + chr3_1:49295077-49295096 Msa0360320:CDS 45.0%
ATGGCCAGATTTCCTCAAGA+AGG + chr3_1:49295096-49295115 Msa0360320:CDS 45.0%
TGGCCAGATTTCCTCAAGAA+GGG + chr3_1:49295097-49295116 Msa0360320:CDS 45.0%
AAGCCCTTCTTGAGGAAATC+TGG - chr3_1:49295103-49295122 None:intergenic 45.0%
!!! TCACCCTCATGCACTGATTT+TGG - chr3_1:49295155-49295174 None:intergenic 45.0%
AGCTACCTTGGAAGCAATTC+GGG + chr3_1:49295274-49295293 Msa0360320:CDS 45.0%
!! TTTGCAGAGGTGTTGAGTAC+CGG + chr3_1:49295461-49295480 Msa0360320:CDS 45.0%
TGCCATCAGCCAATTCTTAC+TGG + chr3_1:49295571-49295590 Msa0360320:CDS 45.0%
CTCCAGTAAGAATTGGCTGA+TGG - chr3_1:49295576-49295595 None:intergenic 45.0%
AGTCCTGCTCCAGTAAGAAT+TGG - chr3_1:49295583-49295602 None:intergenic 45.0%
AAGGGACTAACCTTCCTCTT+TGG + chr3_1:49296136-49296155 Msa0360320:intron 45.0%
! ACCTTCCTCTTTGGAGGATT+AGG + chr3_1:49296145-49296164 Msa0360320:intron 45.0%
TCCTAATCCTCCAAAGAGGA+AGG - chr3_1:49296149-49296168 None:intergenic 45.0%
CTAGAGAAAGCTGTAGTGTG+AGG + chr3_1:49296186-49296205 Msa0360320:intron 45.0%
AGAGAAAGCTGTAGTGTGAG+GGG + chr3_1:49296188-49296207 Msa0360320:intron 45.0%
GTTAGGAGGATCCTAGCAAT+TGG - chr3_1:49296299-49296318 None:intergenic 45.0%
GAAGAAACAGACTGCGTGTT+AGG - chr3_1:49296316-49296335 None:intergenic 45.0%
CACAACGGAAAACGGTTACA+AGG - chr3_1:49296587-49296606 None:intergenic 45.0%
! GAAAATGGCCCCGATACTTT+TGG + chr3_1:49296912-49296931 Msa0360320:CDS 45.0%
!! ATGGGAACGCCAAAAGTATC+GGG - chr3_1:49296924-49296943 None:intergenic 45.0%
! CATGGGAACGCCAAAAGTAT+CGG - chr3_1:49296925-49296944 None:intergenic 45.0%
GAGATCTTCCTTCACTTCCA+TGG - chr3_1:49296943-49296962 None:intergenic 45.0%
GCTTCAACAGATACAGCAGA+GGG + chr3_1:49296981-49297000 Msa0360320:CDS 45.0%
!! TTTTGCTGCATCTTGGTGAC+TGG + chr3_1:49297251-49297270 Msa0360320:three_prime_UTR 45.0%
CTGGTTGTCAATGCCTAACT+AGG + chr3_1:49297328-49297347 Msa0360320:three_prime_UTR 45.0%
GATCACGCATTGTTGGATAC+TGG + chr3_1:49297439-49297458 Msa0360320:three_prime_UTR 45.0%
TTGGTGGGGTGTGATGACAA+AGG - chr3_1:49290358-49290377 None:intergenic 50.0%
CGAGATCTTCGAGTGCGATT+TGG - chr3_1:49290624-49290643 None:intergenic 50.0%
TGGAATAGCGTCTGGTGTGA+GGG - chr3_1:49290662-49290681 None:intergenic 50.0%
TTGGAATAGCGTCTGGTGTG+AGG - chr3_1:49290663-49290682 None:intergenic 50.0%
AGCAGACGAAGGATAAGAGG+CGG - chr3_1:49290750-49290769 None:intergenic 50.0%
! AAGCCGTTGTTTGAGGCGAT+GGG + chr3_1:49290970-49290989 Msa0360320:CDS 50.0%
GGAACAGAATAAGGCTGTGC+AGG + chr3_1:49290993-49291012 Msa0360320:CDS 50.0%
!! ATCTTCTGAAACGCACCGAC+CGG - chr3_1:49291096-49291115 None:intergenic 50.0%
! TAAGGCAGCGATTTTGCCTG+TGG + chr3_1:49291161-49291180 Msa0360320:CDS 50.0%
CGAGTATCAATTGCAGGCTG+GGG + chr3_1:49293080-49293099 Msa0360320:intron 50.0%
GGCAATTGCACCACAAAGCT+TGG + chr3_1:49293101-49293120 Msa0360320:CDS 50.0%
ACTGCCTCTCTAGCAGTGAT+TGG + chr3_1:49293148-49293167 Msa0360320:CDS 50.0%
CTGCCTCTCTAGCAGTGATT+GGG + chr3_1:49293149-49293168 Msa0360320:CDS 50.0%
TTGCCCAATCACTGCTAGAG+AGG - chr3_1:49293155-49293174 None:intergenic 50.0%
TTGGGCAACACGTAAAGCAG+CGG + chr3_1:49293167-49293186 Msa0360320:CDS 50.0%
!! GGCAGAGGCGTTAATTTCCT+TGG + chr3_1:49293188-49293207 Msa0360320:CDS 50.0%
GCCCACAGTGACATTACTTG+AGG + chr3_1:49293248-49293267 Msa0360320:CDS 50.0%
! CCGCCTCCTTTTATGTCTTG+AGG - chr3_1:49293473-49293492 None:intergenic 50.0%
TCTGTCATGCTATCCCTCAC+AGG - chr3_1:49293784-49293803 None:intergenic 50.0%
TGTGAGGGATAGCATGACAG+AGG + chr3_1:49293783-49293802 Msa0360320:CDS 50.0%
!! TGACAGAGGCATTAGACCTG+TGG + chr3_1:49293797-49293816 Msa0360320:CDS 50.0%
GGATCAGTCTTCCTCTCATC+AGG - chr3_1:49294026-49294045 None:intergenic 50.0%
GTGCCTAATGATGGCTTCCA+TGG + chr3_1:49294338-49294357 Msa0360320:CDS 50.0%
CGAGCTGTGTTAACTGTCTC+TGG - chr3_1:49294622-49294641 None:intergenic 50.0%
GGGTGGATCTCATGATAGCA+TGG + chr3_1:49294776-49294795 Msa0360320:CDS 50.0%
ACAGAGTACGAGGTCTTGAG+AGG + chr3_1:49294811-49294830 Msa0360320:CDS 50.0%
ATCATCTGGCCGTAGATTCG+AGG + chr3_1:49294866-49294885 Msa0360320:CDS 50.0%
TCATCTGGCCGTAGATTCGA+GGG + chr3_1:49294867-49294886 Msa0360320:CDS 50.0%
CGGATGATCCCTCGAATCTA+CGG - chr3_1:49294878-49294897 None:intergenic 50.0%
CGTAGATTCGAGGGATCATC+CGG + chr3_1:49294876-49294895 Msa0360320:CDS 50.0%
! ATACTTGCTAGAAGGCCGAC+CGG - chr3_1:49294898-49294917 None:intergenic 50.0%
!! ATGGGAATGCTTTGGGGATG+AGG + chr3_1:49295003-49295022 Msa0360320:CDS 50.0%
!! TGGGAATGCTTTGGGGATGA+GGG + chr3_1:49295004-49295023 Msa0360320:CDS 50.0%
GGCATGTCAGATCTCCATGA+TGG - chr3_1:49295038-49295057 None:intergenic 50.0%
ATGGAGATCTGACATGCCTG+AGG + chr3_1:49295040-49295059 Msa0360320:CDS 50.0%
TGGAGATCTGACATGCCTGA+GGG + chr3_1:49295041-49295060 Msa0360320:CDS 50.0%
ATCTGACATGCCTGAGGGTT+GGG + chr3_1:49295046-49295065 Msa0360320:CDS 50.0%
! CTGAGGGTTGGGATTTTCCT+GGG + chr3_1:49295057-49295076 Msa0360320:CDS 50.0%
! GGTTGGGATTTTCCTGGGTA+TGG + chr3_1:49295062-49295081 Msa0360320:CDS 50.0%
! TCCTCAAGAAGGGCTTTTGG+TGG + chr3_1:49295107-49295126 Msa0360320:CDS 50.0%
ACCACCAAAAGCCCTTCTTG+AGG - chr3_1:49295111-49295130 None:intergenic 50.0%
TCAGTGCATGAGGGTGATCA+AGG + chr3_1:49295158-49295177 Msa0360320:CDS 50.0%
CAGTGCATGAGGGTGATCAA+GGG + chr3_1:49295159-49295178 Msa0360320:CDS 50.0%
AGTGCATGAGGGTGATCAAG+GGG + chr3_1:49295160-49295179 Msa0360320:CDS 50.0%
AGAAAGCAGCAATGCCCATC+CGG + chr3_1:49295201-49295220 Msa0360320:CDS 50.0%
AGCAACCCGAATTGCTTCCA+AGG - chr3_1:49295282-49295301 None:intergenic 50.0%
!! TTGGAAGCAATTCGGGTTGC+TGG + chr3_1:49295281-49295300 Msa0360320:CDS 50.0%
! ATGACAGTGCTGGACAAGAG+AGG + chr3_1:49295372-49295391 Msa0360320:CDS 50.0%
! TGACAGTGCTGGACAAGAGA+GGG + chr3_1:49295373-49295392 Msa0360320:CDS 50.0%
GACAAGAGAGGGATGCAATC+TGG + chr3_1:49295384-49295403 Msa0360320:CDS 50.0%
GGGATGCAATCTGGACTTCT+TGG + chr3_1:49295393-49295412 Msa0360320:CDS 50.0%
GGTACTCAACACCTCTGCAA+AGG - chr3_1:49295462-49295481 None:intergenic 50.0%
CAGCCAATTCTTACTGGAGC+AGG + chr3_1:49295577-49295596 Msa0360320:CDS 50.0%
GAAGGGTTTCAACGACTCCT+TGG + chr3_1:49295850-49295869 Msa0360320:intron 50.0%
! TGGAGGACTGGCATACTGTT+AGG + chr3_1:49295989-49296008 Msa0360320:intron 50.0%
GGACTAACCTTCCTCTTTGG+AGG + chr3_1:49296139-49296158 Msa0360320:intron 50.0%
GAAACAGACTGCGTGTTAGG+AGG - chr3_1:49296313-49296332 None:intergenic 50.0%
!! TGGGAACGCCAAAAGTATCG+GGG - chr3_1:49296923-49296942 None:intergenic 50.0%
! CGATACTTTTGGCGTTCCCA+TGG + chr3_1:49296923-49296942 Msa0360320:CDS 50.0%
CGCTTCAACAGATACAGCAG+AGG + chr3_1:49296980-49296999 Msa0360320:CDS 50.0%
AACAGATACAGCAGAGGGCT+GGG + chr3_1:49296986-49297005 Msa0360320:CDS 50.0%
TATTGCAGTTGGCATCAGGC+TGG + chr3_1:49297033-49297052 Msa0360320:CDS 50.0%
ATTGCAGTTGGCATCAGGCT+GGG + chr3_1:49297034-49297053 Msa0360320:CDS 50.0%
AGCTAGATCTGCGGGAGTGA+GGG - chr3_1:49290283-49290302 None:intergenic 55.0%
AAGCTAGATCTGCGGGAGTG+AGG - chr3_1:49290284-49290303 None:intergenic 55.0%
!! GATTTGGTGAGTGTCGCGGT+CGG - chr3_1:49290608-49290627 None:intergenic 55.0%
!! GTGCGATTTGGTGAGTGTCG+CGG - chr3_1:49290612-49290631 None:intergenic 55.0%
! GGAGGGTTTAGGGTCGGAAA+CGG - chr3_1:49290710-49290729 None:intergenic 55.0%
AGGTGAGGTGAAGCGGAATG+GGG - chr3_1:49290781-49290800 None:intergenic 55.0%
GAGGTGAGGTGAAGCGGAAT+GGG - chr3_1:49290782-49290801 None:intergenic 55.0%
TTTGGGGAGGTGAGGTGAAG+CGG - chr3_1:49290788-49290807 None:intergenic 55.0%
! GAAGCCGTTGTTTGAGGCGA+TGG + chr3_1:49290969-49290988 Msa0360320:CDS 55.0%
! AGCCGTTGTTTGAGGCGATG+GGG + chr3_1:49290971-49290990 Msa0360320:CDS 55.0%
TCCCCCATCGCCTCAAACAA+CGG - chr3_1:49290976-49290995 None:intergenic 55.0%
GGCGATGGGGGAACAGAATA+AGG + chr3_1:49290984-49291003 Msa0360320:CDS 55.0%
CAGAATAAGGCTGTGCAGGG+TGG + chr3_1:49290997-49291016 Msa0360320:CDS 55.0%
AATGACGGCTGCTGTGGAAG+AGG + chr3_1:49291050-49291069 Msa0360320:CDS 55.0%
ATGACGGCTGCTGTGGAAGA+GGG + chr3_1:49291051-49291070 Msa0360320:CDS 55.0%
ACGGATATGGACACGGACAC+CGG - chr3_1:49291640-49291659 None:intergenic 55.0%
AACACGTAAAGCAGCGGCAG+AGG + chr3_1:49293173-49293192 Msa0360320:CDS 55.0%
!! TGAGGCTTGTCGGGTTGACA+AGG + chr3_1:49293266-49293285 Msa0360320:CDS 55.0%
!! CTCTGAGATGCTAGCCGCTT+TGG - chr3_1:49294102-49294121 None:intergenic 55.0%
AGCGGCTAGCATCTCAGAGA+AGG + chr3_1:49294103-49294122 Msa0360320:CDS 55.0%
CGAGGAACAACCACTTCCAC+TGG - chr3_1:49294227-49294246 None:intergenic 55.0%
GATTCGAGGGATCATCCGGT+CGG + chr3_1:49294880-49294899 Msa0360320:CDS 55.0%
!! GGGAATGCTTTGGGGATGAG+GGG + chr3_1:49295005-49295024 Msa0360320:CDS 55.0%
! CTTTGGGGATGAGGGGAAGA+GGG + chr3_1:49295012-49295031 Msa0360320:CDS 55.0%
GATCTGACATGCCTGAGGGT+TGG + chr3_1:49295045-49295064 Msa0360320:CDS 55.0%
CCAGGAAAATCCCAACCCTC+AGG - chr3_1:49295059-49295078 None:intergenic 55.0%
! CCTGAGGGTTGGGATTTTCC+TGG + chr3_1:49295056-49295075 Msa0360320:CDS 55.0%
GTGCATGAGGGTGATCAAGG+GGG + chr3_1:49295161-49295180 Msa0360320:CDS 55.0%
GCAATGGCTGATGACAGTGC+TGG + chr3_1:49295362-49295381 Msa0360320:CDS 55.0%
GCATTCGATGCCCTTCAAGC+AGG + chr3_1:49295422-49295441 Msa0360320:CDS 55.0%
TGGCGTTCCCATGGAAGTGA+AGG + chr3_1:49296932-49296951 Msa0360320:CDS 55.0%
CAACAGATACAGCAGAGGGC+TGG + chr3_1:49296985-49297004 Msa0360320:CDS 55.0%
! GCTGCATCTTGGTGACTGGT+CGG + chr3_1:49297255-49297274 Msa0360320:three_prime_UTR 55.0%
GGGGTGTGAAGAGCAGACGA+AGG - chr3_1:49290761-49290780 None:intergenic 60.0%
GGTGAGGTGAAGCGGAATGG+GGG - chr3_1:49290780-49290799 None:intergenic 60.0%
GGAGGTGAGGTGAAGCGGAA+TGG - chr3_1:49290783-49290802 None:intergenic 60.0%
GACGCGTGTCGCGATTCGAT+TGG + chr3_1:49290859-49290878 Msa0360320:CDS 60.0%
! GCCGTTGTTTGAGGCGATGG+GGG + chr3_1:49290972-49290991 Msa0360320:CDS 60.0%
GGGTGGTGCAGCGGTTTGTA+TGG + chr3_1:49291014-49291033 Msa0360320:CDS 60.0%
GGTGGAAATGACGGCTGCTG+TGG + chr3_1:49291044-49291063 Msa0360320:CDS 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + chr3_1:49291618-49291637 Msa0360320:intron 60.0%
!! GCTTTGGGGATGAGGGGAAG+AGG + chr3_1:49295011-49295030 Msa0360320:CDS 60.0%
TGAGGGGAAGAGGGCCATCA+TGG + chr3_1:49295021-49295040 Msa0360320:CDS 60.0%
!! AATGCCCATCCGGCTTGGTG+AGG + chr3_1:49295211-49295230 Msa0360320:CDS 60.0%
!! ATGCCCATCCGGCTTGGTGA+GGG + chr3_1:49295212-49295231 Msa0360320:CDS 60.0%
CGGGTTGCTGGCGAAGACAA+TGG + chr3_1:49295293-49295312 Msa0360320:CDS 60.0%
GATACAGCAGAGGGCTGGGA+AGG + chr3_1:49296990-49297009 Msa0360320:CDS 60.0%
GCGACACGCGTCACGAGAAG+CGG - chr3_1:49290851-49290870 None:intergenic 65.0%
ACGGCTGCTGTGGAAGAGGG+CGG + chr3_1:49291054-49291073 Msa0360320:CDS 65.0%
TGTGGAAGAGGGCGGTGGTG+CGG + chr3_1:49291062-49291081 Msa0360320:CDS 65.0%
CACGGACACCGGACACGACA+CGG - chr3_1:49291629-49291648 None:intergenic 65.0%
AGGGTGATCAAGGGGGCAGC+AGG + chr3_1:49295168-49295187 Msa0360320:CDS 65.0%
AAGGGGGCAGCAGGAGAGCT+TGG + chr3_1:49295177-49295196 Msa0360320:CDS 65.0%
AGGGGGCAGCAGGAGAGCTT+GGG + chr3_1:49295178-49295197 Msa0360320:CDS 65.0%
GCAGCAATGCCCATCCGGCT+TGG + chr3_1:49295206-49295225 Msa0360320:CDS 65.0%
!! TGCCCATCCGGCTTGGTGAG+GGG + chr3_1:49295213-49295232 Msa0360320:CDS 65.0%
GGCTGTGCAGGGTGGTGCAG+CGG + chr3_1:49291005-49291024 Msa0360320:CDS 70.0%
GCTGCTGTGGAAGAGGGCGG+TGG + chr3_1:49291057-49291076 Msa0360320:CDS 70.0%
GGCCCCTCACCAAGCCGGAT+GGG - chr3_1:49295218-49295237 None:intergenic 70.0%
CAGAGGGCCCCTCACCAAGC+CGG - chr3_1:49295223-49295242 None:intergenic 70.0%
GGAAGAGGGCGGTGGTGCGG+CGG + chr3_1:49291065-49291084 Msa0360320:CDS 75.0%
GGGCCCCTCACCAAGCCGGA+TGG - chr3_1:49295219-49295238 None:intergenic 75.0%
! AGAGGGCGGTGGTGCGGCGG+TGG + chr3_1:49291068-49291087 Msa0360320:CDS 80.0%
! CGGTGGTGCGGCGGTGGTGC+CGG + chr3_1:49291074-49291093 Msa0360320:CDS 80.0%
!!! GGTGCGGCGGTGGTGCCGGT+CGG + chr3_1:49291078-49291097 Msa0360320:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 49290247 49297471 49290247 ID=Msa0360320;Name=Msa0360320
chr3_1 mRNA 49290247 49297471 49290247 ID=Msa0360320-mRNA-1;Parent=Msa0360320;Name=Msa0360320-mRNA-1;_AED=0.05;_eAED=0.05;_QI=240|1|1|1|0.83|0.71|7|365|926
chr3_1 exon 49290247 49291200 49290247 ID=Msa0360320-mRNA-1:exon:8679;Parent=Msa0360320-mRNA-1
chr3_1 exon 49293096 49293287 49293096 ID=Msa0360320-mRNA-1:exon:8680;Parent=Msa0360320-mRNA-1
chr3_1 exon 49293775 49293877 49293775 ID=Msa0360320-mRNA-1:exon:8681;Parent=Msa0360320-mRNA-1
chr3_1 exon 49293964 49294676 49293964 ID=Msa0360320-mRNA-1:exon:8682;Parent=Msa0360320-mRNA-1
chr3_1 exon 49294768 49295634 49294768 ID=Msa0360320-mRNA-1:exon:8683;Parent=Msa0360320-mRNA-1
chr3_1 exon 49296894 49297350 49296894 ID=Msa0360320-mRNA-1:exon:8684;Parent=Msa0360320-mRNA-1
chr3_1 exon 49297372 49297471 49297372 ID=Msa0360320-mRNA-1:exon:8685;Parent=Msa0360320-mRNA-1
chr3_1 five_prime_UTR 49290247 49290486 49290247 ID=Msa0360320-mRNA-1:five_prime_utr;Parent=Msa0360320-mRNA-1
chr3_1 CDS 49290487 49291200 49290487 ID=Msa0360320-mRNA-1:cds;Parent=Msa0360320-mRNA-1
chr3_1 CDS 49293096 49293287 49293096 ID=Msa0360320-mRNA-1:cds;Parent=Msa0360320-mRNA-1
chr3_1 CDS 49293775 49293877 49293775 ID=Msa0360320-mRNA-1:cds;Parent=Msa0360320-mRNA-1
chr3_1 CDS 49293964 49294676 49293964 ID=Msa0360320-mRNA-1:cds;Parent=Msa0360320-mRNA-1
chr3_1 CDS 49294768 49295634 49294768 ID=Msa0360320-mRNA-1:cds;Parent=Msa0360320-mRNA-1
chr3_1 CDS 49296894 49297085 49296894 ID=Msa0360320-mRNA-1:cds;Parent=Msa0360320-mRNA-1
chr3_1 three_prime_UTR 49297086 49297350 49297086 ID=Msa0360320-mRNA-1:three_prime_utr;Parent=Msa0360320-mRNA-1
chr3_1 three_prime_UTR 49297372 49297471 49297372 ID=Msa0360320-mRNA-1:three_prime_utr;Parent=Msa0360320-mRNA-1
Gene Sequence

>Msa0360320

ATGAAGAACACAAAACCCCAAACCCAATCAACACCATCTTCAAGATCTTCATCACTATCTTCCCATTTAGCAATGGTTGAACTAAAACAAAAAATCTTAACCTCTCTTTCAAAACTCTCCGACCGCGACACTCACCAAATCGCACTCGAAGATCTCGAAAAGACTATCTTATCCCTCACACCAGACGCTATTCCAATGATCTTAAACTGCTTATACGACGCCGTTTCCGACCCTAAACCCTCCATCAAAAACGAATCTCTCCGCCTCTTATCCTTCGTCTGCTCTTCACACCCCCATTCCGCTTCACCTCACCTCCCCAAAATCATTTCTCATATTGTAAAACGTCTTAAAGATACTGATTCCGCTTCTCGTGACGCGTGTCGCGATTCGATTGGATCAATTGCTGCTCTTTACCTCAGAGGAGAGAATAACAATGGGAGCAATGTGAGTAATGGGAATGGTTCTTTGGTTGGATTGTTTGTGAAGCCGTTGTTTGAGGCGATGGGGGAACAGAATAAGGCTGTGCAGGGTGGTGCAGCGGTTTGTATGGCGAAAATGGTGGAAATGACGGCTGCTGTGGAAGAGGGCGGTGGTGCGGCGGTGGTGCCGGTCGGTGCGTTTCAGAAGATGTGTCCTAGGATCTGTAAATTGATTAATAACCCTAATTTTTTGGCTAAGGCAGCGATTTTGCCTGTGGTATCTGCATTGTCTCAGGCTGGGGCAATTGCACCACAAAGCTTGGACAATTTGCTATCTAGCATTCATGACTGCCTCTCTAGCAGTGATTGGGCAACACGTAAAGCAGCGGCAGAGGCGTTAATTTCCTTGGCTTTGCATTCAAGCAGTTTGATTACTGATAAAACGACGCCCACAGTGACATTACTTGAGGCTTGTCGGGTTGACAAGATAAGACCTGTGAGGGATAGCATGACAGAGGCATTAGACCTGTGGAAAAAAATTGCAGGGAAAGGAGATGGATCTTCTCATGATTCAAAGCCATTGTCATCTGATGGTGGGAATCCTGAACCAGCTGTTTTGACAGAAACTAGTGACGTGAAAAATGTAAATCCTGATGAGAGGAAGACTGATCCATCAGTGAAGGATTTATCAACCAGTTCTTCAAACACGGATTCAAATTCTAAGGCCAAAGCGGCTAGCATCTCAGAGAAGGCAGTTGTAATATTAAAAAAGAAACCACCTGTCTTAAATGATAAAGTACTAAACCCAGAATTTTTCCAAAACCTTGAAAGAAGGGACTTAGATGATTTACCAGTGGAAGTGGTTGTTCCTCGCAAATGCCTCAATTCTTCAAGCTCAAACAATGACGAAGAGTCAAAGGCAACTGCCAAAGATTCAAACGAAAGAACAAATGCCACTGGAAATGTGCCTAATGATGGCTTCCATGGATCTGTCAATAATAAATATCATGGTTTAGAGAGAGGTAATGATGGAAATTCAAGACAAAGGAATTATGAAGACTTTGCTCAGGACAGATACTATGAAAGAAGAATGAATGCAAAAGAACTGAGGACAAAAGCTAACGATACAATTGACAGGTCTGAAAATGATCAGAGGGATGGTTCTGCCAATATTGCAGGTTTTTCTAGAGCTGATGGTCAATCAGAAGTACCCTTCTCCAATAACAGAGGAAACTTGCTGGCCATCCAGAGACAGTTAACACAGCTCGAAAGACAACAGGTTCATCTGATGAACATGCTGCAGGATTTCATGGGTGGATCTCATGATAGCATGGTGACTCTAGAGAACAGAGTACGAGGTCTTGAGAGGATTGTTGAAGACATGTTACAAGATTTATCTATATCATCTGGCCGTAGATTCGAGGGATCATCCGGTCGGCCTTCTAGCAAGTATAATGGTTTTAATGAATATTCCAATTCCAAGTATGGAAGAGGTGGTGATGGACGCATCCCATTTAATGAAAGGTTTACCCAAACTGATGGGAATGCTTTGGGGATGAGGGGAAGAGGGCCATCATGGAGATCTGACATGCCTGAGGGTTGGGATTTTCCTGGGTATGGTGCTTCTAGAAATGGCCAGATTTCCTCAAGAAGGGCTTTTGGTGGTAGTTCTGTTGATGGAAGATCACCAAAATCAGTGCATGAGGGTGATCAAGGGGGCAGCAGGAGAGCTTGGGAGAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGGCCCTCTGCAAGAAGTGTTTGGCAAGCTTCTAAAGATGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGCGAAGACAATGGAACATCTAGAGCAACAAGAGTAGCAGTCCCTGAAATGACTGCTGAAGCAATGGCTGATGACAGTGCTGGACAAGAGAGGGATGCAATCTGGACTTCTTGGAGTAATGCATTCGATGCCCTTCAAGCAGGTGATATAGATTCAGCCTTTGCAGAGGTGTTGAGTACCGGAGATGATCGTTTGCTTGTAAAGCTAATGGATAGAACTGGCCCTGTAATTAACGAACTTTCAAGTGAGATTGCATGTGAGATCTTATATGCCATCAGCCAATTCTTACTGGAGCAGGACTTGTTTAATATCTGTTTGTCTTGGATTCAACAGTTGGTGGAGGTATTATTTGAAAATGGCCCCGATACTTTTGGCGTTCCCATGGAAGTGAAGGAAGATCTCTTGCGGAATTTACACGACGCTTCAACAGATACAGCAGAGGGCTGGGAAGGCGTACCACCAGATCAACTTTTATTGCAGTTGGCATCAGGCTGGGAAATTGATCTACAACAGCATGACAAATAG
Protein sequence

>Msa0360320

MKNTKPQTQSTPSSRSSSLSSHLAMVELKQKILTSLSKLSDRDTHQIALEDLEKTILSLTPDAIPMILNCLYDAVSDPKPSIKNESLRLLSFVCSSHPHSASPHLPKIISHIVKRLKDTDSASRDACRDSIGSIAALYLRGENNNGSNVSNGNGSLVGLFVKPLFEAMGEQNKAVQGGAAVCMAKMVEMTAAVEEGGGAAVVPVGAFQKMCPRICKLINNPNFLAKAAILPVVSALSQAGAIAPQSLDNLLSSIHDCLSSSDWATRKAAAEALISLALHSSSLITDKTTPTVTLLEACRVDKIRPVRDSMTEALDLWKKIAGKGDGSSHDSKPLSSDGGNPEPAVLTETSDVKNVNPDERKTDPSVKDLSTSSSNTDSNSKAKAASISEKAVVILKKKPPVLNDKVLNPEFFQNLERRDLDDLPVEVVVPRKCLNSSSSNNDEESKATAKDSNERTNATGNVPNDGFHGSVNNKYHGLERGNDGNSRQRNYEDFAQDRYYERRMNAKELRTKANDTIDRSENDQRDGSANIAGFSRADGQSEVPFSNNRGNLLAIQRQLTQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGRRFEGSSGRPSSKYNGFNEYSNSKYGRGGDGRIPFNERFTQTDGNALGMRGRGPSWRSDMPEGWDFPGYGASRNGQISSRRAFGGSSVDGRSPKSVHEGDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTSRATRVAVPEMTAEAMADDSAGQERDAIWTSWSNAFDALQAGDIDSAFAEVLSTGDDRLLVKLMDRTGPVINELSSEIACEILYAISQFLLEQDLFNICLSWIQQLVEVLFENGPDTFGVPMEVKEDLLRNLHDASTDTAEGWEGVPPDQLLLQLASGWEIDLQQHDK*