AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0361480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0361480 MtrunA17_Chr3g0099751 95.146 103 4 1 1 102 1 103 2.01e-67 197
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 42 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATGAATTTGTGAGTTTAA+TGG 0.250143 3_1:+52005527 Msa0361480:three_prime_UTR
AACATGCTTTGATAGAATTA+TGG 0.258618 3_1:+52005146 Msa0361480:intron
GTGAAATAATAAGAATTTCT+TGG 0.259819 3_1:+52005559 Msa0361480:three_prime_UTR
AGTGAAGAAGAGTGAGGAAT+TGG 0.296391 3_1:-52004423 None:intergenic
GTGTGCAAAGTTGTCCGTTT+AGG 0.345761 3_1:+52004247 Msa0361480:five_prime_UTR
TGGAGACTTCATGAATCATT+AGG 0.353959 3_1:+52005622 Msa0361480:three_prime_UTR
AATATTGAAGTTGGGAGAAT+GGG 0.360100 3_1:-52004336 None:intergenic
GTACAAGGAGCATTGATCTT+AGG 0.360884 3_1:+52005361 Msa0361480:exon
AAAGGAAAGTCATTTGATAA+AGG 0.376794 3_1:+52005184 Msa0361480:CDS
AAAATTAAATGGTACCTTGA+TGG 0.391314 3_1:-52004497 None:intergenic
GTCTACACATATATATCTAT+TGG 0.392894 3_1:-52004201 None:intergenic
TGAAATTCTTCAGCTGTAGA+TGG 0.429413 3_1:-52005215 None:intergenic
AACACTTCATGCAACCTAAA+CGG 0.458091 3_1:-52004261 None:intergenic
GAGAATGGGGATGTGTCTAT+AGG 0.462776 3_1:-52004322 None:intergenic
AAATATTGAAGTTGGGAGAA+TGG 0.473143 3_1:-52004337 None:intergenic
GTGAAGAAGAGTGAGGAATT+GGG 0.473632 3_1:-52004422 None:intergenic
TTGTAGAAGAATGGTCTAGA+GGG 0.502419 3_1:-52004472 None:intergenic
TGCTGCTGAAGAAGCTGCTA+AGG 0.518120 3_1:+52005307 Msa0361480:CDS
AAGCTGCTAAGGGTAATTCA+AGG 0.521770 3_1:+52005318 Msa0361480:CDS
TGGACAAGAAGTGAAGGAAA+AGG 0.524067 3_1:+52005166 Msa0361480:CDS
TTGATGGAGTTGTAGAAGAA+TGG 0.525498 3_1:-52004481 None:intergenic
GTTGTAGAAGAATGGTCTAG+AGG 0.544303 3_1:-52004473 None:intergenic
GAGAGTAACCATACCATGGC+TGG 0.545967 3_1:+52004397 Msa0361480:exon
ATTGGGCACCAGCCATGGTA+TGG 0.547369 3_1:-52004405 None:intergenic
GAGGAATTGGGCACCAGCCA+TGG 0.552723 3_1:-52004410 None:intergenic
CACACTCTGCACCCTCACAT+AGG 0.569289 3_1:-52004229 None:intergenic
ACACTCTGCACCCTCACATA+GGG 0.570563 3_1:-52004228 None:intergenic
AATGGGGATGTGTCTATAGG+TGG 0.571409 3_1:-52004319 None:intergenic
TACACGTGGTGTTGTTGAAG+TGG 0.573045 3_1:-52004284 None:intergenic
AGCTGAAGAATTTCAGAGAG+TGG 0.590235 3_1:+52005223 Msa0361480:CDS
GTGGCAGAAGAGAAAACCAA+TGG 0.605337 3_1:+52005242 Msa0361480:CDS
ATTCTTCTACAACTCCATCA+AGG 0.606836 3_1:+52004483 Msa0361480:CDS
GAATTATGGACAAGAAGTGA+AGG 0.611950 3_1:+52005160 Msa0361480:intron
ATATTGAAGTTGGGAGAATG+GGG 0.618895 3_1:-52004335 None:intergenic
AAATGTTAAGAACAAGTACA+AGG 0.627029 3_1:+52005346 Msa0361480:CDS
CTCTGCACCCTCACATAGGG+TGG 0.636479 3_1:-52004225 None:intergenic
GAGAGAGAGTAACCATACCA+TGG 0.643543 3_1:+52004393 Msa0361480:exon
AAGATGAGTGAAGAAGAGTG+AGG 0.651606 3_1:-52004429 None:intergenic
GCTGCTGAAGAAGCTGCTAA+GGG 0.655312 3_1:+52005308 Msa0361480:CDS
TGTAGACACCACCCTATGTG+AGG 0.695960 3_1:+52004217 Msa0361480:five_prime_UTR
GGAAGCTAGTGATGTACACG+TGG 0.764840 3_1:-52004298 None:intergenic
GTAGACACCACCCTATGTGA+GGG 0.775960 3_1:+52004218 Msa0361480:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATTAAAAACATCAA+GGG - chr3_1:52004526-52004545 None:intergenic 10.0%
!!! TTTTTTTTCTTTCAATTAAT+TGG + chr3_1:52004554-52004573 Msa0361480:intron 10.0%
!!! TTTTAAAAAATCACATAATT+AGG - chr3_1:52005058-52005077 None:intergenic 10.0%
!! AATTTAATTAAAAACATCAA+GGG - chr3_1:52004526-52004545 None:intergenic 10.0%
!!! TTTTTTTTCTTTCAATTAAT+TGG + chr3_1:52004554-52004573 Msa0361480:intron 10.0%
!!! TTTTAAAAAATCACATAATT+AGG - chr3_1:52005058-52005077 None:intergenic 10.0%
!! CAATTTAATTAAAAACATCA+AGG - chr3_1:52004527-52004546 None:intergenic 15.0%
!!! TTAAATTTTAGTTTGTACTT+TGG + chr3_1:52004683-52004702 Msa0361480:intron 15.0%
!! CAATTTAATTAAAAACATCA+AGG - chr3_1:52004527-52004546 None:intergenic 15.0%
!!! TTAAATTTTAGTTTGTACTT+TGG + chr3_1:52004683-52004702 Msa0361480:intron 15.0%
!! AGAGTAAAAATATTGAAGTT+GGG - chr3_1:52004347-52004366 None:intergenic 20.0%
!! ATCAAGGGATAAAAATTAAA+TGG - chr3_1:52004511-52004530 None:intergenic 20.0%
!! AAAATCTTTACTTTCTTGAT+GGG - chr3_1:52004862-52004881 None:intergenic 20.0%
!! AAAAATCTTTACTTTCTTGA+TGG - chr3_1:52004863-52004882 None:intergenic 20.0%
!! CAATAATTAATAGACAACTA+CGG - chr3_1:52005118-52005137 None:intergenic 20.0%
!!! TTGTTTTGTAAGTTAGAATA+AGG + chr3_1:52005416-52005435 Msa0361480:three_prime_UTR 20.0%
!! TTATGAATTTGTGAGTTTAA+TGG + chr3_1:52005527-52005546 Msa0361480:three_prime_UTR 20.0%
!! GTGAAATAATAAGAATTTCT+TGG + chr3_1:52005559-52005578 Msa0361480:three_prime_UTR 20.0%
!!! CTCCATTTTTTTTATTTAGA+TGG + chr3_1:52005602-52005621 Msa0361480:three_prime_UTR 20.0%
!! CTCCATCTAAATAAAAAAAA+TGG - chr3_1:52005607-52005626 None:intergenic 20.0%
!! AGAGTAAAAATATTGAAGTT+GGG - chr3_1:52004347-52004366 None:intergenic 20.0%
!! ATCAAGGGATAAAAATTAAA+TGG - chr3_1:52004511-52004530 None:intergenic 20.0%
!! AAAATCTTTACTTTCTTGAT+GGG - chr3_1:52004862-52004881 None:intergenic 20.0%
!! AAAAATCTTTACTTTCTTGA+TGG - chr3_1:52004863-52004882 None:intergenic 20.0%
!! CAATAATTAATAGACAACTA+CGG - chr3_1:52005118-52005137 None:intergenic 20.0%
!!! TTGTTTTGTAAGTTAGAATA+AGG + chr3_1:52005416-52005435 Msa0361480:three_prime_UTR 20.0%
!! TTATGAATTTGTGAGTTTAA+TGG + chr3_1:52005527-52005546 Msa0361480:three_prime_UTR 20.0%
!! GTGAAATAATAAGAATTTCT+TGG + chr3_1:52005559-52005578 Msa0361480:three_prime_UTR 20.0%
!!! CTCCATTTTTTTTATTTAGA+TGG + chr3_1:52005602-52005621 Msa0361480:three_prime_UTR 20.0%
!! CTCCATCTAAATAAAAAAAA+TGG - chr3_1:52005607-52005626 None:intergenic 20.0%
! GTCTACACATATATATCTAT+TGG - chr3_1:52004204-52004223 None:intergenic 25.0%
! GAGAGTAAAAATATTGAAGT+TGG - chr3_1:52004348-52004367 None:intergenic 25.0%
! AAAATTAAATGGTACCTTGA+TGG - chr3_1:52004500-52004519 None:intergenic 25.0%
! AACTCTACATGCAATAATTA+AGG - chr3_1:52004754-52004773 None:intergenic 25.0%
! GAAAATTAAAGGTTGAAAAG+TGG + chr3_1:52004813-52004832 Msa0361480:intron 25.0%
! TTGAGTAAAGATGTCAAATT+TGG - chr3_1:52004897-52004916 None:intergenic 25.0%
! ATTTGACATCTTTACTCAAA+TGG + chr3_1:52004898-52004917 Msa0361480:intron 25.0%
! TTTGACATCTTTACTCAAAT+GGG + chr3_1:52004899-52004918 Msa0361480:intron 25.0%
! AACATGCTTTGATAGAATTA+TGG + chr3_1:52005146-52005165 Msa0361480:intron 25.0%
! AAAGGAAAGTCATTTGATAA+AGG + chr3_1:52005184-52005203 Msa0361480:CDS 25.0%
! AAATGTTAAGAACAAGTACA+AGG + chr3_1:52005346-52005365 Msa0361480:CDS 25.0%
!! TAGCAATTACACAAACTTTT+TGG - chr3_1:52005457-52005476 None:intergenic 25.0%
! GTCTACACATATATATCTAT+TGG - chr3_1:52004204-52004223 None:intergenic 25.0%
! GAGAGTAAAAATATTGAAGT+TGG - chr3_1:52004348-52004367 None:intergenic 25.0%
! AAAATTAAATGGTACCTTGA+TGG - chr3_1:52004500-52004519 None:intergenic 25.0%
! AACTCTACATGCAATAATTA+AGG - chr3_1:52004754-52004773 None:intergenic 25.0%
! GAAAATTAAAGGTTGAAAAG+TGG + chr3_1:52004813-52004832 Msa0361480:intron 25.0%
! TTGAGTAAAGATGTCAAATT+TGG - chr3_1:52004897-52004916 None:intergenic 25.0%
! ATTTGACATCTTTACTCAAA+TGG + chr3_1:52004898-52004917 Msa0361480:intron 25.0%
! TTTGACATCTTTACTCAAAT+GGG + chr3_1:52004899-52004918 Msa0361480:intron 25.0%
! AACATGCTTTGATAGAATTA+TGG + chr3_1:52005146-52005165 Msa0361480:intron 25.0%
! AAAGGAAAGTCATTTGATAA+AGG + chr3_1:52005184-52005203 Msa0361480:CDS 25.0%
! AAATGTTAAGAACAAGTACA+AGG + chr3_1:52005346-52005365 Msa0361480:CDS 25.0%
!! TAGCAATTACACAAACTTTT+TGG - chr3_1:52005457-52005476 None:intergenic 25.0%
AATATTGAAGTTGGGAGAAT+GGG - chr3_1:52004339-52004358 None:intergenic 30.0%
AAATATTGAAGTTGGGAGAA+TGG - chr3_1:52004340-52004359 None:intergenic 30.0%
AAAGTAAGAATGATCCTAGT+AGG + chr3_1:52004629-52004648 Msa0361480:intron 30.0%
!! AGATTTGTTAGTTGTGTTTG+AGG + chr3_1:52004722-52004741 Msa0361480:intron 30.0%
TTTGTGAGGTGGAAAATTAA+AGG + chr3_1:52004802-52004821 Msa0361480:intron 30.0%
AATTACAAGTGTCTATGTGT+CGG - chr3_1:52005032-52005051 None:intergenic 30.0%
TTAATAGACAACTACGGATA+CGG - chr3_1:52005112-52005131 None:intergenic 30.0%
!!! TTTCACTTTTTGTGTTCCAT+TGG - chr3_1:52005261-52005280 None:intergenic 30.0%
AATATTGAAGTTGGGAGAAT+GGG - chr3_1:52004339-52004358 None:intergenic 30.0%
AAATATTGAAGTTGGGAGAA+TGG - chr3_1:52004340-52004359 None:intergenic 30.0%
AAAGTAAGAATGATCCTAGT+AGG + chr3_1:52004629-52004648 Msa0361480:intron 30.0%
!! AGATTTGTTAGTTGTGTTTG+AGG + chr3_1:52004722-52004741 Msa0361480:intron 30.0%
TTTGTGAGGTGGAAAATTAA+AGG + chr3_1:52004802-52004821 Msa0361480:intron 30.0%
AATTACAAGTGTCTATGTGT+CGG - chr3_1:52005032-52005051 None:intergenic 30.0%
TTAATAGACAACTACGGATA+CGG - chr3_1:52005112-52005131 None:intergenic 30.0%
!!! TTTCACTTTTTGTGTTCCAT+TGG - chr3_1:52005261-52005280 None:intergenic 30.0%
AACACTTCATGCAACCTAAA+CGG - chr3_1:52004264-52004283 None:intergenic 35.0%
ATATTGAAGTTGGGAGAATG+GGG - chr3_1:52004338-52004357 None:intergenic 35.0%
TTGTAGAAGAATGGTCTAGA+GGG - chr3_1:52004475-52004494 None:intergenic 35.0%
TTGATGGAGTTGTAGAAGAA+TGG - chr3_1:52004484-52004503 None:intergenic 35.0%
ATTCTTCTACAACTCCATCA+AGG + chr3_1:52004483-52004502 Msa0361480:CDS 35.0%
! AATTTTCCACCTCACAAAAC+AGG - chr3_1:52004800-52004819 None:intergenic 35.0%
GAATTATGGACAAGAAGTGA+AGG + chr3_1:52005160-52005179 Msa0361480:intron 35.0%
TGAAATTCTTCAGCTGTAGA+TGG - chr3_1:52005218-52005237 None:intergenic 35.0%
TGGAGACTTCATGAATCATT+AGG + chr3_1:52005622-52005641 Msa0361480:three_prime_UTR 35.0%
AACACTTCATGCAACCTAAA+CGG - chr3_1:52004264-52004283 None:intergenic 35.0%
ATATTGAAGTTGGGAGAATG+GGG - chr3_1:52004338-52004357 None:intergenic 35.0%
TTGTAGAAGAATGGTCTAGA+GGG - chr3_1:52004475-52004494 None:intergenic 35.0%
TTGATGGAGTTGTAGAAGAA+TGG - chr3_1:52004484-52004503 None:intergenic 35.0%
ATTCTTCTACAACTCCATCA+AGG + chr3_1:52004483-52004502 Msa0361480:CDS 35.0%
! AATTTTCCACCTCACAAAAC+AGG - chr3_1:52004800-52004819 None:intergenic 35.0%
GAATTATGGACAAGAAGTGA+AGG + chr3_1:52005160-52005179 Msa0361480:intron 35.0%
TGAAATTCTTCAGCTGTAGA+TGG - chr3_1:52005218-52005237 None:intergenic 35.0%
TGGAGACTTCATGAATCATT+AGG + chr3_1:52005622-52005641 Msa0361480:three_prime_UTR 35.0%
GTGAAGAAGAGTGAGGAATT+GGG - chr3_1:52004425-52004444 None:intergenic 40.0%
AGTGAAGAAGAGTGAGGAAT+TGG - chr3_1:52004426-52004445 None:intergenic 40.0%
AAGATGAGTGAAGAAGAGTG+AGG - chr3_1:52004432-52004451 None:intergenic 40.0%
GTTGTAGAAGAATGGTCTAG+AGG - chr3_1:52004476-52004495 None:intergenic 40.0%
CTTCAACTCAATCTCCTACT+AGG - chr3_1:52004646-52004665 None:intergenic 40.0%
TGGACAAGAAGTGAAGGAAA+AGG + chr3_1:52005166-52005185 Msa0361480:CDS 40.0%
AGCTGAAGAATTTCAGAGAG+TGG + chr3_1:52005223-52005242 Msa0361480:CDS 40.0%
AAGCTGCTAAGGGTAATTCA+AGG + chr3_1:52005318-52005337 Msa0361480:CDS 40.0%
!! GTACAAGGAGCATTGATCTT+AGG + chr3_1:52005361-52005380 Msa0361480:exon 40.0%
GTGAAGAAGAGTGAGGAATT+GGG - chr3_1:52004425-52004444 None:intergenic 40.0%
AGTGAAGAAGAGTGAGGAAT+TGG - chr3_1:52004426-52004445 None:intergenic 40.0%
AAGATGAGTGAAGAAGAGTG+AGG - chr3_1:52004432-52004451 None:intergenic 40.0%
GTTGTAGAAGAATGGTCTAG+AGG - chr3_1:52004476-52004495 None:intergenic 40.0%
CTTCAACTCAATCTCCTACT+AGG - chr3_1:52004646-52004665 None:intergenic 40.0%
TGGACAAGAAGTGAAGGAAA+AGG + chr3_1:52005166-52005185 Msa0361480:CDS 40.0%
AGCTGAAGAATTTCAGAGAG+TGG + chr3_1:52005223-52005242 Msa0361480:CDS 40.0%
AAGCTGCTAAGGGTAATTCA+AGG + chr3_1:52005318-52005337 Msa0361480:CDS 40.0%
!! GTACAAGGAGCATTGATCTT+AGG + chr3_1:52005361-52005380 Msa0361480:exon 40.0%
GTGTGCAAAGTTGTCCGTTT+AGG + chr3_1:52004247-52004266 Msa0361480:five_prime_UTR 45.0%
!! TACACGTGGTGTTGTTGAAG+TGG - chr3_1:52004287-52004306 None:intergenic 45.0%
AATGGGGATGTGTCTATAGG+TGG - chr3_1:52004322-52004341 None:intergenic 45.0%
GAGAATGGGGATGTGTCTAT+AGG - chr3_1:52004325-52004344 None:intergenic 45.0%
GAGAGAGAGTAACCATACCA+TGG + chr3_1:52004393-52004412 Msa0361480:exon 45.0%
! CTGCATGATCCTGTTTTGTG+AGG + chr3_1:52004788-52004807 Msa0361480:intron 45.0%
! CATGATCCTGTTTTGTGAGG+TGG + chr3_1:52004791-52004810 Msa0361480:intron 45.0%
GTGGCAGAAGAGAAAACCAA+TGG + chr3_1:52005242-52005261 Msa0361480:CDS 45.0%
GTGTGCAAAGTTGTCCGTTT+AGG + chr3_1:52004247-52004266 Msa0361480:five_prime_UTR 45.0%
!! TACACGTGGTGTTGTTGAAG+TGG - chr3_1:52004287-52004306 None:intergenic 45.0%
AATGGGGATGTGTCTATAGG+TGG - chr3_1:52004322-52004341 None:intergenic 45.0%
GAGAATGGGGATGTGTCTAT+AGG - chr3_1:52004325-52004344 None:intergenic 45.0%
GAGAGAGAGTAACCATACCA+TGG + chr3_1:52004393-52004412 Msa0361480:exon 45.0%
! CTGCATGATCCTGTTTTGTG+AGG + chr3_1:52004788-52004807 Msa0361480:intron 45.0%
! CATGATCCTGTTTTGTGAGG+TGG + chr3_1:52004791-52004810 Msa0361480:intron 45.0%
GTGGCAGAAGAGAAAACCAA+TGG + chr3_1:52005242-52005261 Msa0361480:CDS 45.0%
TGTAGACACCACCCTATGTG+AGG + chr3_1:52004217-52004236 Msa0361480:five_prime_UTR 50.0%
GTAGACACCACCCTATGTGA+GGG + chr3_1:52004218-52004237 Msa0361480:five_prime_UTR 50.0%
ACACTCTGCACCCTCACATA+GGG - chr3_1:52004231-52004250 None:intergenic 50.0%
GGAAGCTAGTGATGTACACG+TGG - chr3_1:52004301-52004320 None:intergenic 50.0%
! TACTCTCTCTCTCTCTGAGG+AGG - chr3_1:52004384-52004403 None:intergenic 50.0%
GGTTACTCTCTCTCTCTCTG+AGG - chr3_1:52004387-52004406 None:intergenic 50.0%
GAGAGTAACCATACCATGGC+TGG + chr3_1:52004397-52004416 Msa0361480:exon 50.0%
TGCTGCTGAAGAAGCTGCTA+AGG + chr3_1:52005307-52005326 Msa0361480:CDS 50.0%
GCTGCTGAAGAAGCTGCTAA+GGG + chr3_1:52005308-52005327 Msa0361480:CDS 50.0%
TGTAGACACCACCCTATGTG+AGG + chr3_1:52004217-52004236 Msa0361480:five_prime_UTR 50.0%
GTAGACACCACCCTATGTGA+GGG + chr3_1:52004218-52004237 Msa0361480:five_prime_UTR 50.0%
ACACTCTGCACCCTCACATA+GGG - chr3_1:52004231-52004250 None:intergenic 50.0%
GGAAGCTAGTGATGTACACG+TGG - chr3_1:52004301-52004320 None:intergenic 50.0%
! TACTCTCTCTCTCTCTGAGG+AGG - chr3_1:52004384-52004403 None:intergenic 50.0%
GGTTACTCTCTCTCTCTCTG+AGG - chr3_1:52004387-52004406 None:intergenic 50.0%
GAGAGTAACCATACCATGGC+TGG + chr3_1:52004397-52004416 Msa0361480:exon 50.0%
TGCTGCTGAAGAAGCTGCTA+AGG + chr3_1:52005307-52005326 Msa0361480:CDS 50.0%
GCTGCTGAAGAAGCTGCTAA+GGG + chr3_1:52005308-52005327 Msa0361480:CDS 50.0%
CACACTCTGCACCCTCACAT+AGG - chr3_1:52004232-52004251 None:intergenic 55.0%
ATTGGGCACCAGCCATGGTA+TGG - chr3_1:52004408-52004427 None:intergenic 55.0%
CACACTCTGCACCCTCACAT+AGG - chr3_1:52004232-52004251 None:intergenic 55.0%
ATTGGGCACCAGCCATGGTA+TGG - chr3_1:52004408-52004427 None:intergenic 55.0%
CTCTGCACCCTCACATAGGG+TGG - chr3_1:52004228-52004247 None:intergenic 60.0%
GAGGAATTGGGCACCAGCCA+TGG - chr3_1:52004413-52004432 None:intergenic 60.0%
!! GTCTATGTGTCGGTGTCGCG+TGG - chr3_1:52005022-52005041 None:intergenic 60.0%
ACGGACACGAGACACGACAC+TGG - chr3_1:52005093-52005112 None:intergenic 60.0%
CTCTGCACCCTCACATAGGG+TGG - chr3_1:52004228-52004247 None:intergenic 60.0%
GAGGAATTGGGCACCAGCCA+TGG - chr3_1:52004413-52004432 None:intergenic 60.0%
!! GTCTATGTGTCGGTGTCGCG+TGG - chr3_1:52005022-52005041 None:intergenic 60.0%
ACGGACACGAGACACGACAC+TGG - chr3_1:52005093-52005112 None:intergenic 60.0%
!! GTGTCGGTGTCGCGTGGTGT+CGG - chr3_1:52005016-52005035 None:intergenic 65.0%
!! GTGTCGGTGTCGCGTGGTGT+CGG - chr3_1:52005016-52005035 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 52004169 52005654 52004169 ID=Msa0361480;Name=Msa0361480
chr3_1 mRNA 52004169 52005654 52004169 ID=Msa0361480-mRNA-1;Parent=Msa0361480;Name=Msa0361480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=243|1|1|1|1|1|2|278|102
chr3_1 exon 52004169 52004504 52004169 ID=Msa0361480-mRNA-1:exon:9315;Parent=Msa0361480-mRNA-1
chr3_1 exon 52005161 52005654 52005161 ID=Msa0361480-mRNA-1:exon:9316;Parent=Msa0361480-mRNA-1
chr3_1 five_prime_UTR 52004169 52004411 52004169 ID=Msa0361480-mRNA-1:five_prime_utr;Parent=Msa0361480-mRNA-1
chr3_1 CDS 52004412 52004504 52004412 ID=Msa0361480-mRNA-1:cds;Parent=Msa0361480-mRNA-1
chr3_1 CDS 52005161 52005376 52005161 ID=Msa0361480-mRNA-1:cds;Parent=Msa0361480-mRNA-1
chr3_1 three_prime_UTR 52005377 52005654 52005377 ID=Msa0361480-mRNA-1:three_prime_utr;Parent=Msa0361480-mRNA-1
Gene Sequence

>Msa0361480

ATGGCTGGTGCCCAATTCCTCACTCTTCTTCACTCATCTTCAAGATCTTCTTTGCTCAAACCCTCTAGACCATTCTTCTACAACTCCATCAAGAATTATGGACAAGAAGTGAAGGAAAAGGAAAGTCATTTGATAAAGGAGAGAGCACCATCTACAGCTGAAGAATTTCAGAGAGTGGCAGAAGAGAAAACCAATGGAACACAAAAAGTGAAAAGTCAAACAGTTGATAAAGCAATTGATGCTGCTGAAGAAGCTGCTAAGGGTAATTCAAGGATTGAAAATGTTAAGAACAAGTACAAGGAGCATTGA
Protein sequence

>Msa0361480

MAGAQFLTLLHSSSRSSLLKPSRPFFYNSIKNYGQEVKEKESHLIKERAPSTAEEFQRVAEEKTNGTQKVKSQTVDKAIDAAEEAAKGNSRIENVKNKYKEH*