AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0364250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0364250 MtrunA17_Chr3g0103121 98.267 1385 22 1 1 1385 1 1383 0.0 2803
Msa0364250 MtrunA17_Chr2g0290921 53.522 1377 532 26 52 1385 67 1378 0.0 1302
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0364250 AT3G13300.2 58.352 1311 478 20 93 1385 49 1309 0.0 1429
Msa0364250 AT3G13300.1 58.352 1311 478 20 93 1385 84 1344 0.0 1429
Msa0364250 AT3G13290.1 55.138 1411 533 30 2 1385 3 1340 0.0 1412
Msa0364250 AT3G13300.3 56.095 1173 450 19 93 1247 84 1209 0.0 1202

Find 406 sgRNAs with CRISPR-Local

Find 683 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGAAGCTTTCTGATTTC+AGG 0.111544 3_1:+56990969 Msa0364250:CDS
AATGTTCAGCCATGCCTTTC+TGG 0.114471 3_1:-56993116 None:intergenic
TAGGGTTAGGGTTAGGGTTT+GGG 0.192627 3_1:-56987049 None:intergenic
TGCTCTCAGGCTTCTGATCT+TGG 0.193404 3_1:+56991412 Msa0364250:CDS
ACTTGCTTGCATCATTGTTT+TGG 0.210534 3_1:-56990765 None:intergenic
AACTGATGATGCTGAATTAA+TGG 0.236650 3_1:-56994130 None:intergenic
GTGCAGCAACGCCTTGAATC+TGG 0.237439 3_1:+56993147 Msa0364250:CDS
AATCAATCTGTGATTAGATT+TGG 0.239107 3_1:-56986918 None:intergenic
TTGCTCAAACATGGCTTTGC+AGG 0.239587 3_1:-56993079 None:intergenic
AGCTTGTCAAGAGGACATTT+TGG 0.240443 3_1:-56989115 None:intergenic
ATCAATCTGTGATTAGATTT+GGG 0.257493 3_1:-56986917 None:intergenic
AATAAGTCTTATATTTGTTA+TGG 0.259437 3_1:+56987650 Msa0364250:CDS
ATGCGAGTTGATTCGGGATT+AGG 0.274855 3_1:-56990455 None:intergenic
ATCAGATCCTAATCCGGTTT+TGG 0.278281 3_1:+56987610 Msa0364250:CDS
CTCAATTTAGACACTGTATC+TGG 0.281616 3_1:+56995338 Msa0364250:three_prime_UTR
TAGGGTTAGGGTTAGGGTTA+GGG 0.283522 3_1:-56987055 None:intergenic
TCTTTGTATCGCTATTAAAT+TGG 0.284531 3_1:-56991090 None:intergenic
TTAGGGTTAGGGTTAGGGTT+AGG 0.284570 3_1:-56987056 None:intergenic
CTTCGTTGGCAATGACTCTA+AGG 0.288649 3_1:+56993175 Msa0364250:CDS
TTAACAACGGTTGCAACTAT+TGG 0.288908 3_1:+56995433 Msa0364250:three_prime_UTR
TCAGTATGACCTGAGCTTAA+AGG 0.295799 3_1:-56990818 None:intergenic
TGGGGAAGGTGGTGGTTGAT+TGG 0.298076 3_1:-56986994 None:intergenic
GGTTGAAACAGGGGAATATC+AGG 0.299864 3_1:+56987672 Msa0364250:CDS
GACCGTTTCCAACATGTTAC+AGG 0.301042 3_1:+56992476 Msa0364250:CDS
TACTATCGCGGAATCCTTCC+AGG 0.304972 3_1:+56992628 Msa0364250:CDS
GGGGAAGGTGGTGGTTGATT+GGG 0.306694 3_1:-56986993 None:intergenic
GAAATGTTAGGGTTAGGGTT+AGG 0.310108 3_1:-56987062 None:intergenic
TATTTGTTATGGGTTGAAAC+AGG 0.311245 3_1:+56987661 Msa0364250:CDS
TGAGAAGAAATGTTAGGGTT+AGG 0.314580 3_1:-56987068 None:intergenic
TTGAACAGCAATAACAATAT+TGG 0.317646 3_1:-56988841 None:intergenic
CTGTCATCCACGAGAGCTTT+CGG 0.320363 3_1:-56994989 None:intergenic
GACCACTGTCGTTTCAAAAC+TGG 0.320503 3_1:-56993040 None:intergenic
TTAGGGTTAGGGTTAGGGTT+TGG 0.320971 3_1:-56987050 None:intergenic
GTTGCGCCGATTACGAAATA+TGG 0.323077 3_1:+56987587 Msa0364250:CDS
GGGAATTGAGAAGAAATGTT+AGG 0.329897 3_1:-56987074 None:intergenic
TGAAATTCCATTTGGTTCAT+TGG 0.334502 3_1:-56991731 None:intergenic
CCTGAAATCAGAAAGCTTCC+TGG 0.334833 3_1:-56990969 None:intergenic
TCAGCAGTATGCTTTGGATT+TGG 0.339251 3_1:+56990595 Msa0364250:CDS
GGCTATTCAGCAGTATGCTT+TGG 0.339687 3_1:+56990589 Msa0364250:CDS
TGTCATCCACGAGAGCTTTC+GGG 0.341908 3_1:-56994988 None:intergenic
GAAATTGAACGGTGTTGAAT+TGG 0.344229 3_1:-56987251 None:intergenic
ATTGATGGGGTTCAACTTGT+AGG 0.344290 3_1:+56989139 Msa0364250:CDS
ATAATCCATGCGAGTTGATT+CGG 0.346072 3_1:-56990462 None:intergenic
AGGGTTAGGGTTAGGGTTTG+GGG 0.347828 3_1:-56987048 None:intergenic
TGTCGACCCAAAACCGGATT+AGG 0.349912 3_1:-56987617 None:intergenic
GTACAAAGTTGTGAGTTTCA+TGG 0.351634 3_1:+56995253 Msa0364250:three_prime_UTR
AAATGTTAGGGTTAGGGTTA+GGG 0.355061 3_1:-56987061 None:intergenic
CTGCCGCGGCAGCGTTGATT+AGG 0.358098 3_1:+56987462 Msa0364250:CDS
GTTGTTGTTGTTGGATTGGA+GGG 0.358457 3_1:-56987373 None:intergenic
TGTATCTTGGTTATGCTCTC+AGG 0.367034 3_1:+56994505 Msa0364250:CDS
ATAAGTCTTATATTTGTTAT+GGG 0.368854 3_1:+56987651 Msa0364250:CDS
GCGTCAACTTGTTGACGATT+AGG 0.370461 3_1:+56995382 Msa0364250:three_prime_UTR
GTTGTTGAGGTGGTTGAAGA+GGG 0.370725 3_1:-56987286 None:intergenic
TTGAACTCTTCTGATACAAT+TGG 0.371554 3_1:+56995224 Msa0364250:three_prime_UTR
TTCCATGTTTCAGTATTGCT+TGG 0.376457 3_1:-56990281 None:intergenic
GCGGTGGTGGTTGTTGTTGT+TGG 0.377045 3_1:-56987382 None:intergenic
CACCTATCGCACCACACTCT+CGG 0.378749 3_1:-56991447 None:intergenic
TCATGGGGAACATATTGTTC+AGG 0.379850 3_1:+56990547 Msa0364250:CDS
CAACGCTGCCGCGGCAGCAT+TGG 0.385687 3_1:-56987456 None:intergenic
CCTCTTGACAAGCTCATTGA+TGG 0.386557 3_1:+56989124 Msa0364250:CDS
GAGAAGAAATGTTAGGGTTA+GGG 0.388457 3_1:-56987067 None:intergenic
TGTTGACGATTAGGATAAAC+TGG 0.389090 3_1:+56995391 Msa0364250:three_prime_UTR
CCTTGAAGGGACCACAAAAT+CGG 0.389422 3_1:+56990213 Msa0364250:intron
TAATCCATGCGAGTTGATTC+GGG 0.389462 3_1:-56990461 None:intergenic
AAATGTAACAGATAAAGATA+TGG 0.389845 3_1:+56989809 Msa0364250:intron
TCCATGTTTCAGTATTGCTT+GGG 0.392154 3_1:-56990280 None:intergenic
TTGAACATCCTCAAATTTGC+TGG 0.393957 3_1:+56988883 Msa0364250:CDS
ATGGAAATGCACTCAGACTT+TGG 0.394659 3_1:+56990298 Msa0364250:CDS
CTGCTGATTTGTCTAGAAAT+AGG 0.395185 3_1:-56990845 None:intergenic
CCAATCAAATGCCTTCCTTT+CGG 0.401932 3_1:-56987503 None:intergenic
TTCAGCTAAGCCGTCTCTTA+AGG 0.402458 3_1:+56990331 Msa0364250:CDS
CAGTATGACCTGAGCTTAAA+GGG 0.405764 3_1:-56990817 None:intergenic
GGTGGTTGTTGTTGTTGGAT+TGG 0.406074 3_1:-56987377 None:intergenic
AAAGGGGTTGGGGAAGGTGG+TGG 0.406728 3_1:-56987002 None:intergenic
CACCTCCTCCTTTGAGCCCA+AGG 0.408906 3_1:+56990942 Msa0364250:CDS
TCAATCAATCAAATTCAATC+TGG 0.411048 3_1:+56986955 Msa0364250:five_prime_UTR
TGTGCATATCGAAAGGGGTT+GGG 0.415519 3_1:-56987013 None:intergenic
GCTTTCACTTCTGCAGCAGC+TGG 0.416373 3_1:+56994941 Msa0364250:CDS
TCGAAAGGGGTTGGGGAAGG+TGG 0.416388 3_1:-56987005 None:intergenic
AAGCACTACACCTTGGCTTA+AGG 0.417960 3_1:-56994922 None:intergenic
GGATTTGAAGGAGGTGGGAT+TGG 0.418453 3_1:-56987314 None:intergenic
TCACCTGCATCTAATACAAA+AGG 0.419217 3_1:+56991628 Msa0364250:CDS
GGCTGTGATTGTGGCGGTGG+TGG 0.420287 3_1:-56987395 None:intergenic
CTAACTTGAGTGATCATGTT+GGG 0.420797 3_1:+56991002 Msa0364250:CDS
GGGAGGTTTGAAATTCCATT+TGG 0.421005 3_1:-56991739 None:intergenic
TTGTGTATGATGTGGATGTT+AGG 0.421691 3_1:+56987534 Msa0364250:CDS
TGCTGAAGATGTTCATCTCC+TGG 0.422189 3_1:+56988650 Msa0364250:CDS
TCTTGCATTGCCGCAATTTG+AGG 0.422466 3_1:-56991781 None:intergenic
CAGTTACAAAAGAGGGTAGA+AGG 0.422557 3_1:+56992345 Msa0364250:CDS
AAAATCGGGAAGTGAAGCTC+TGG 0.423065 3_1:+56990228 Msa0364250:CDS
GGTTGTTGTTGTTGGATTGG+AGG 0.423316 3_1:-56987374 None:intergenic
GTTTCAGACAACTGTCAAAC+AGG 0.427081 3_1:+56992867 Msa0364250:CDS
TGTTCCAGTAAAACTAAGAA+TGG 0.428432 3_1:-56990510 None:intergenic
CAACCTTGCTAGCTCCTTTG+TGG 0.428639 3_1:-56994420 None:intergenic
GAAGGAGGTGGGATTGGTTG+AGG 0.430428 3_1:-56987308 None:intergenic
CAGCATATATAGCATTCCTC+TGG 0.431524 3_1:-56990415 None:intergenic
TGCAGCAACGCCTTGAATCT+GGG 0.432152 3_1:+56993148 Msa0364250:CDS
CTGATAGACTTGCTCAAAGA+TGG 0.432453 3_1:-56995066 None:intergenic
GCAGTTATTGACAATGCAAA+AGG 0.433980 3_1:+56992286 Msa0364250:intron
CCTCACCGGCATTGGAAGGT+TGG 0.434736 3_1:-56991531 None:intergenic
ATTAGTCTCAGAGGAGGAAC+TGG 0.436553 3_1:-56991218 None:intergenic
GTGATGTATCTATTGTATCT+TGG 0.436940 3_1:+56994492 Msa0364250:CDS
TCGCACGTGCATTGTTATCA+TGG 0.436976 3_1:-56995042 None:intergenic
CGGTCCTTTACTTCATGAAA+AGG 0.437258 3_1:+56994263 Msa0364250:CDS
CTCCTCTGGTGCTGTTAATC+CGG 0.437904 3_1:+56987421 Msa0364250:CDS
CTCACCGGCATTGGAAGGTT+GGG 0.438048 3_1:-56991530 None:intergenic
TCTGATCCATATTTCGTAAT+CGG 0.440016 3_1:-56987593 None:intergenic
ATGGGCTGTGATTGTGGCGG+TGG 0.440874 3_1:-56987398 None:intergenic
TAGAAGGCAAGTTACGTTGA+TGG 0.443622 3_1:-56995097 None:intergenic
AAAGCTTCCTGGACAACCTT+GGG 0.444345 3_1:-56990958 None:intergenic
CTCTTGACAAGCTCATTGAT+GGG 0.445198 3_1:+56989125 Msa0364250:CDS
AGTCCAATGCTGATGCTTTG+TGG 0.445348 3_1:+56992408 Msa0364250:CDS
GTAAAGGACCGTTGTTCAGC+TGG 0.445699 3_1:-56994251 None:intergenic
TACCACTTTCACTTCTACTT+CGG 0.446019 3_1:-56991302 None:intergenic
GCCAAAAGATGTCCATGAAA+AGG 0.446472 3_1:+56991570 Msa0364250:CDS
TATGCTGTGCACTTGGAATA+TGG 0.446666 3_1:+56990431 Msa0364250:CDS
GTCCAATGCTGATGCTTTGT+GGG 0.446960 3_1:+56992409 Msa0364250:CDS
AGATCAGATCCAGTGATAGA+AGG 0.447313 3_1:-56995113 None:intergenic
ATGAGACGGGCACCGGCGTT+AGG 0.447468 3_1:-56987335 None:intergenic
GCTGTTAGATCTTTGCTTAG+AGG 0.451218 3_1:+56987713 Msa0364250:CDS
AACCTTGCTAGCTCCTTTGT+GGG 0.451382 3_1:-56994419 None:intergenic
TGAGGCTTATCTTCATCATC+CGG 0.451744 3_1:-56988810 None:intergenic
ACGGTGTTGAATTGGAAAAT+TGG 0.453357 3_1:-56987243 None:intergenic
CTTTGAGCCCAAGGTTGTCC+AGG 0.453549 3_1:+56990951 Msa0364250:CDS
TTCTGATCTTGGCATTGAGA+TGG 0.454800 3_1:+56991423 Msa0364250:CDS
CAAGGATCTACCAGCAGCAT+TGG 0.455723 3_1:+56992520 Msa0364250:CDS
AGCACTACACCTTGGCTTAA+GGG 0.455982 3_1:-56994921 None:intergenic
AACTGTCAAACAGGCACTTC+AGG 0.456032 3_1:+56992876 Msa0364250:CDS
TTATTGTTGTTGTGAGGGAA+AGG 0.456439 3_1:-56987143 None:intergenic
GAGAGTGTGGTGCGATAGGT+GGG 0.457288 3_1:+56991449 Msa0364250:CDS
TTCCTCCTCTGAGACTAATA+TGG 0.458509 3_1:+56991222 Msa0364250:CDS
AAGTCCATCCTCACCGGCAT+TGG 0.458774 3_1:-56991539 None:intergenic
AAATGATGAACTTGGCAAGC+AGG 0.458868 3_1:+56991345 Msa0364250:CDS
AGAAGGCTTGAGGCCGCCCT+AGG 0.460118 3_1:+56992362 Msa0364250:CDS
GACACCACAAAAGTTGGAAA+TGG 0.460120 3_1:+56989067 Msa0364250:CDS
GGAAGAAGGTGAAGTGATGC+GGG 0.460953 3_1:-56986818 None:intergenic
CAATCACAGCCCATCTCCTC+TGG 0.461543 3_1:+56987407 Msa0364250:CDS
CAACTTGTAGGAACACATGA+TGG 0.461858 3_1:+56989151 Msa0364250:CDS
CGAGAGTGTGGTGCGATAGG+TGG 0.461859 3_1:+56991448 Msa0364250:CDS
CCTGGAAAAGTTGATTCTAC+TGG 0.461915 3_1:+56991493 Msa0364250:CDS
ACCTATCGCACCACACTCTC+GGG 0.462373 3_1:-56991446 None:intergenic
AATGCAAGATTCACTCAATC+AGG 0.462453 3_1:+56991795 Msa0364250:CDS
ACAATATTGGCAGTAATTTG+AGG 0.462903 3_1:-56988828 None:intergenic
TTGTTGAGGTGGTTGAAGAG+GGG 0.463030 3_1:-56987285 None:intergenic
ATTTGGTTCATTGGACGAAT+CGG 0.464738 3_1:-56991722 None:intergenic
GTTATTGCTGTTCAAATAGT+CGG 0.465040 3_1:+56988849 Msa0364250:CDS
TGTTGAGGTGGTTGAAGAGG+GGG 0.465758 3_1:-56987284 None:intergenic
GGTTGTTGAGGTGGTTGAAG+AGG 0.466717 3_1:-56987287 None:intergenic
CCTTCCAATGCCGGTGAGGA+TGG 0.467485 3_1:+56991535 Msa0364250:CDS
AGCTGAGGCTGCACTTCACC+AGG 0.469685 3_1:-56987560 None:intergenic
ACGAAGTAGGCCCAGATTCA+AGG 0.470044 3_1:-56993158 None:intergenic
GCGTTAGGATTTGAAGGAGG+TGG 0.470524 3_1:-56987320 None:intergenic
TAGATCCTTGTTCATGAAGT+TGG 0.470586 3_1:-56992507 None:intergenic
AGAATTGACACCACAAAAGT+TGG 0.470722 3_1:+56989061 Msa0364250:CDS
CTGGCCCAACCTTCCAATGC+CGG 0.470829 3_1:+56991526 Msa0364250:CDS
CCTAATCAAAATGATGAACT+TGG 0.471249 3_1:+56991337 Msa0364250:CDS
GAAGAAGGTGGTGGCGGTGA+AGG 0.471456 3_1:-56987107 None:intergenic
TGCTATATATGCTGTGCACT+TGG 0.472612 3_1:+56990424 Msa0364250:CDS
TACAAAAGGGAAGAGACAAA+AGG 0.473506 3_1:+56991642 Msa0364250:CDS
GGGATTGGTTGAGGTTGTTG+AGG 0.477789 3_1:-56987299 None:intergenic
GATTTCTGAGCGGAAATATG+AGG 0.478102 3_1:+56994442 Msa0364250:CDS
GGCGGTGAAGGAGCGGAGGA+AGG 0.478381 3_1:-56987095 None:intergenic
CAGAATAATCATTAACAGCT+TGG 0.479225 3_1:-56991027 None:intergenic
AGTTGTGAGTTTCATGGATA+GGG 0.479283 3_1:+56995259 Msa0364250:three_prime_UTR
CCGAAAGGAAGGCATTTGAT+TGG 0.480677 3_1:+56987503 Msa0364250:CDS
TTATTCTGTTGACAGACAAA+TGG 0.482116 3_1:+56991042 Msa0364250:CDS
ATTGGTTGAGGTTGTTGAGG+TGG 0.483340 3_1:-56987296 None:intergenic
TTCTCAGAGGGTCACAGACT+TGG 0.483986 3_1:+56988620 Msa0364250:intron
CGTAACTTGCCTTCTATCAC+TGG 0.484515 3_1:+56995104 Msa0364250:CDS
AATTGCATGCACTAGGAGAC+GGG 0.484580 3_1:-56991696 None:intergenic
GGTAGTTATTGTTGTTGTGA+GGG 0.486119 3_1:-56987148 None:intergenic
GCAATCTGTCGACCCAAAAC+CGG 0.486705 3_1:-56987623 None:intergenic
GTTGAATTGGAAAATTGGTC+TGG 0.487326 3_1:-56987238 None:intergenic
CTTGAAGGGACCACAAAATC+GGG 0.487379 3_1:+56990214 Msa0364250:intron
ATTAACAGCACCAGAGGAGA+TGG 0.487505 3_1:-56987417 None:intergenic
AGATAAAGATATGGGAAGAT+CGG 0.487871 3_1:+56989818 Msa0364250:intron
CGAGGGTCAGAGAAAGCTAA+TGG 0.488149 3_1:+56994179 Msa0364250:CDS
GGGTTAGGGTTAGGGTTTGG+GGG 0.488310 3_1:-56987047 None:intergenic
ATATCAGCATCACTACTAGA+AGG 0.488386 3_1:-56990902 None:intergenic
GTGCATATCGAAAGGGGTTG+GGG 0.489058 3_1:-56987012 None:intergenic
TGGAAATGGTGAAGCCTTTG+TGG 0.490908 3_1:+56989081 Msa0364250:CDS
GATTAGGCTGCCGAGTAGTA+AGG 0.491884 3_1:+56987478 Msa0364250:CDS
CTCAAAGGAGGAGGTGGAGA+AGG 0.492437 3_1:-56990935 None:intergenic
GCTGTGCAGGTTGATTTACA+TGG 0.492472 3_1:+56994876 Msa0364250:intron
GCACCGGCGTTAGGATTTGA+AGG 0.492766 3_1:-56987326 None:intergenic
GATGTGGATGTTAGGTTGCC+TGG 0.492942 3_1:+56987542 Msa0364250:CDS
AATGATGAACTTGGCAAGCA+GGG 0.494755 3_1:+56991346 Msa0364250:CDS
ATTGGAGAAAACTGTAAAGA+AGG 0.494861 3_1:+56992538 Msa0364250:CDS
ACAAAAGGGAAGAGACAAAA+GGG 0.496492 3_1:+56991643 Msa0364250:CDS
GTTGGACAATTACTTGTTTG+TGG 0.497127 3_1:-56988911 None:intergenic
CAGTTGTCTGAAACTGTGCT+TGG 0.498385 3_1:-56992858 None:intergenic
AAGTTGTGAGTTTCATGGAT+AGG 0.498502 3_1:+56995258 Msa0364250:three_prime_UTR
TATTGTTGTTGTGAGGGAAA+GGG 0.498846 3_1:-56987142 None:intergenic
TAACGCCGGTGCCCGTCTCA+TGG 0.499659 3_1:+56987337 Msa0364250:CDS
CTGTTAGATCTTTGCTTAGA+GGG 0.500665 3_1:+56987714 Msa0364250:CDS
AATGTAACAGATAAAGATAT+GGG 0.501039 3_1:+56989810 Msa0364250:intron
AGCTCCTTTGTGGGATCTAG+TGG 0.501320 3_1:-56994410 None:intergenic
GCCTCTTTAGACTCGTCTGC+AGG 0.501400 3_1:+56990707 Msa0364250:CDS
GGAATTGAGAAGAAATGTTA+GGG 0.501752 3_1:-56987073 None:intergenic
GAGGATGAAGAAGGTGGTGG+CGG 0.502132 3_1:-56987113 None:intergenic
GGGTAGTTATTGTTGTTGTG+AGG 0.502297 3_1:-56987149 None:intergenic
TTGCAGGACATCTCAAATGC+AGG 0.503679 3_1:-56993063 None:intergenic
AGAGTCATTGCCAACGAAGT+AGG 0.503698 3_1:-56993171 None:intergenic
GGGTAAGAGGAGGATGAAGA+AGG 0.504358 3_1:-56987122 None:intergenic
TTCATGGATAGGGTCAAAAT+CGG 0.505456 3_1:+56995269 Msa0364250:three_prime_UTR
GAAAGCTTCCTGGACAACCT+TGG 0.505770 3_1:-56990959 None:intergenic
ACACACTTACTGCTGTGATA+AGG 0.509881 3_1:-56989936 None:intergenic
CCTTTCGGCACCTTACTACT+CGG 0.510889 3_1:-56987488 None:intergenic
AGAAAGTGTGCATATCGAAA+GGG 0.511878 3_1:-56987019 None:intergenic
GCGGTGAAGGAGCGGAGGAA+GGG 0.511933 3_1:-56987094 None:intergenic
CGAGATGCAATTACTGCTGA+AGG 0.513750 3_1:+56990680 Msa0364250:CDS
TGAATCTGGGCCTACTTCGT+TGG 0.516934 3_1:+56993161 Msa0364250:CDS
CTGGACAACCTTGGGCTCAA+AGG 0.517143 3_1:-56990950 None:intergenic
CGTTAGGATTTGAAGGAGGT+GGG 0.518936 3_1:-56987319 None:intergenic
GTTCCTCTTCCCTTAAGCCA+AGG 0.519277 3_1:+56994912 Msa0364250:CDS
AGGACCGTTGTTCAGCTGGA+TGG 0.519683 3_1:-56994247 None:intergenic
TGAGGTAGAAACAAAGATCC+AGG 0.519840 3_1:+56991258 Msa0364250:CDS
TTCTACTGGAGGGGACTCGC+TGG 0.519985 3_1:+56991507 Msa0364250:CDS
ATTTGTTATGGGTTGAAACA+GGG 0.520370 3_1:+56987662 Msa0364250:CDS
GGTTTATTGTGTTCAGACAC+TGG 0.521084 3_1:+56990568 Msa0364250:CDS
TTCCGACTCATCTACATCAA+TGG 0.521778 3_1:+56991594 Msa0364250:CDS
TACCCACATCAACCACATCC+TGG 0.522229 3_1:-56991276 None:intergenic
GTTGGATTGGAGGGGTGCTG+AGG 0.522501 3_1:-56987364 None:intergenic
GTTCCAGTAAAACTAAGAAT+GGG 0.522950 3_1:-56990509 None:intergenic
AGGTGGTGGCGGTGAAGGAG+CGG 0.523238 3_1:-56987102 None:intergenic
GGTAAGAACTCTCAACCATC+AGG 0.523880 3_1:+56991664 Msa0364250:CDS
CCAATCGATTTGTCATCCAT+TGG 0.524133 3_1:-56989198 None:intergenic
TCAAGATACCCTTTAAGCTC+AGG 0.524270 3_1:+56990809 Msa0364250:CDS
TGCTGAGGAGAGCCATGAGA+CGG 0.524784 3_1:-56987349 None:intergenic
TGTGCCAGAGTTTGTTCTTG+AGG 0.524944 3_1:-56994211 None:intergenic
AACCTTGGGCTCAAAGGAGG+AGG 0.525226 3_1:-56990944 None:intergenic
GCAACAGAAACTACCTAGCC+AGG 0.525235 3_1:-56988668 None:intergenic
TAAACTGTCAAATATTCAGC+TGG 0.526029 3_1:+56995298 Msa0364250:three_prime_UTR
CTTGGGCTCAAAGGAGGAGG+TGG 0.526489 3_1:-56990941 None:intergenic
CGCACGTGCATTGTTATCAT+GGG 0.529399 3_1:-56995041 None:intergenic
TGGCAGTGCCAGCAAATTTG+AGG 0.529733 3_1:-56988891 None:intergenic
TGTATCGCTATTAAATTGGT+CGG 0.530759 3_1:-56991086 None:intergenic
GTTGATTCTACATTCCAGAA+AGG 0.531065 3_1:+56993102 Msa0364250:CDS
GTGGAAAATTTCTGAAGGTC+CGG 0.531628 3_1:+56988791 Msa0364250:CDS
ACCTGCAGACGAGTCTAAAG+AGG 0.532576 3_1:-56990708 None:intergenic
GATTCGTCCAATGAACCAAA+TGG 0.533055 3_1:+56991724 Msa0364250:CDS
TGGGTCTCAGCTAGTGAAGA+AGG 0.533496 3_1:+56990248 Msa0364250:CDS
GGACCGTTGTTCAGCTGGAT+GGG 0.533756 3_1:-56994246 None:intergenic
TAAGAGGAGGATGAAGAAGG+TGG 0.535073 3_1:-56987119 None:intergenic
GTTGTGAGGGAAAGGGTAAG+AGG 0.535240 3_1:-56987135 None:intergenic
TCGATTGGTATCAGCATCAC+AGG 0.536247 3_1:+56989213 Msa0364250:CDS
CTCGAGCACTTCTCTACTCA+AGG 0.536550 3_1:-56994160 None:intergenic
GAGGAGGATGAAGAAGGTGG+TGG 0.537407 3_1:-56987116 None:intergenic
AACTGCTGCCAATGCTGCCG+CGG 0.537667 3_1:+56987448 Msa0364250:CDS
TGAAGCTAAAACTGTTACAC+TGG 0.537738 3_1:+56990877 Msa0364250:CDS
TTTCTTTGCCATCAGAAACT+GGG 0.538122 3_1:-56991381 None:intergenic
AATTGCATCTCGTGAAACAC+TGG 0.538200 3_1:-56990669 None:intergenic
GCTGATGCTGAAGCTGAAGC+TGG 0.538875 3_1:-56987190 None:intergenic
AACCTGTAACATGTTGGAAA+CGG 0.540248 3_1:-56992478 None:intergenic
GAATTGCATGCACTAGGAGA+CGG 0.541168 3_1:-56991697 None:intergenic
TTTGTTATGGGTTGAAACAG+GGG 0.542294 3_1:+56987663 Msa0364250:CDS
GAGAGCCATGAGACGGGCAC+CGG 0.543288 3_1:-56987342 None:intergenic
AGGAAGAAGGTGAAGTGATG+CGG 0.545207 3_1:-56986819 None:intergenic
GTTGACGCATGTCAAAAGTA+AGG 0.545493 3_1:-56995367 None:intergenic
GTTGCAGCATTGCCTCATGC+AGG 0.547266 3_1:+56990371 Msa0364250:CDS
AACAGTTCCAGTTACAAAAG+AGG 0.547439 3_1:+56992337 Msa0364250:CDS
GCTGAGGAGAGCCATGAGAC+GGG 0.547731 3_1:-56987348 None:intergenic
AGCCCACAAAGCATCAGCAT+TGG 0.548262 3_1:-56992411 None:intergenic
CATTGTTATCATGGGATCTG+AGG 0.550311 3_1:-56995033 None:intergenic
TCAAGACAGTCACTTGGAAG+CGG 0.551366 3_1:-56986784 None:intergenic
TGGTGATGGTGGTGATCGTA+AGG 0.551385 3_1:-56987170 None:intergenic
ATCTATCTGATTGAGGAAGA+AGG 0.552487 3_1:-56986832 None:intergenic
CCATCCTCACCGGCATTGGA+AGG 0.553455 3_1:-56991535 None:intergenic
ATATGGATCAGATCCTAATC+CGG 0.554205 3_1:+56987604 Msa0364250:CDS
CACCTGCATCTAATACAAAA+GGG 0.554215 3_1:+56991629 Msa0364250:CDS
CTGTGTTCAGACCTCATGAT+GGG 0.555408 3_1:+56989857 Msa0364250:CDS
CCTCCACCATTAGAAAATGC+GGG 0.555705 3_1:+56990629 Msa0364250:CDS
GACAAATGGATACAATTCAC+AGG 0.557685 3_1:+56991056 Msa0364250:CDS
GCAACCTCAAGAACAAACTC+TGG 0.559208 3_1:+56994207 Msa0364250:CDS
GCATTGGCAGCAGTTATCGC+CGG 0.559856 3_1:-56987440 None:intergenic
GTCTTGAAGTCCATCCTCAC+CGG 0.561202 3_1:-56991545 None:intergenic
GCCCGAGAGTGTGGTGCGAT+AGG 0.561638 3_1:+56991445 Msa0364250:CDS
GCACTAGGAGACGGGGAAGA+CGG 0.562596 3_1:-56991688 None:intergenic
ACAATATGATCAGGCTGGTG+TGG 0.565224 3_1:-56989913 None:intergenic
CTGATTTGTCAATGTGCCAA+TGG 0.565563 3_1:+56989182 Msa0364250:CDS
TGATGACATGCAATAAAAGA+CGG 0.565984 3_1:-56995145 None:intergenic
TTTGTATTAGATGCAGGTGA+TGG 0.566249 3_1:-56991625 None:intergenic
TTGTTGTTGTTGGATTGGAG+GGG 0.566727 3_1:-56987372 None:intergenic
TGCCGAAGTAGAAGTGAAAG+TGG 0.567144 3_1:+56991300 Msa0364250:CDS
ATTGAGATGGCCCGAGAGTG+TGG 0.569188 3_1:+56991436 Msa0364250:CDS
TAATCAAACCTGTAACATGT+TGG 0.569223 3_1:-56992484 None:intergenic
AACTTGTAGGAACACATGAT+GGG 0.569461 3_1:+56989152 Msa0364250:CDS
ATCCCACAAAGGAGCTAGCA+AGG 0.570393 3_1:+56994417 Msa0364250:CDS
GTAGTAAGGTGCCGAAAGGA+AGG 0.570482 3_1:+56987492 Msa0364250:CDS
TGGTGGCGGTGAAGGAGCGG+AGG 0.572382 3_1:-56987099 None:intergenic
AGAATCAACTTGCTCAAACA+TGG 0.573208 3_1:-56993088 None:intergenic
GCTGAAGCTGAAGCTGGTGA+TGG 0.573656 3_1:-56987184 None:intergenic
ACACCTTGGCTTAAGGGAAG+AGG 0.574273 3_1:-56994915 None:intergenic
GAGGAGATGGGCTGTGATTG+TGG 0.574317 3_1:-56987404 None:intergenic
TACCATTGATGTAGATGAGT+CGG 0.574582 3_1:-56991596 None:intergenic
AAGAAAGTGTGCATATCGAA+AGG 0.575176 3_1:-56987020 None:intergenic
TAATCCCGAATCAACTCGCA+TGG 0.576654 3_1:+56990457 Msa0364250:CDS
ACATGTCCCGAAAGCTCTCG+TGG 0.578490 3_1:+56994982 Msa0364250:CDS
GCCTCCACCATTAGAAAATG+CGG 0.579140 3_1:+56990628 Msa0364250:CDS
ATATCGAAAGGGGTTGGGGA+AGG 0.579411 3_1:-56987008 None:intergenic
TCATTTACATGTCGTCAGCA+TGG 0.579551 3_1:-56995171 None:intergenic
GTGTGCATATCGAAAGGGGT+TGG 0.580483 3_1:-56987014 None:intergenic
TCAATCTGTGATTAGATTTG+GGG 0.580705 3_1:-56986916 None:intergenic
TGGAGGATCTTCTGCCACAA+AGG 0.581110 3_1:-56989095 None:intergenic
TCTTGACAAGCTCATTGATG+GGG 0.581398 3_1:+56989126 Msa0364250:CDS
TGAAGTGCAGCCTCAGCTTG+AGG 0.582585 3_1:+56987565 Msa0364250:CDS
AAGAATGCATCCTTAAGAGA+CGG 0.583417 3_1:-56990341 None:intergenic
CAACAAAACCCAGTTTCTGA+TGG 0.584907 3_1:+56991373 Msa0364250:CDS
AGAAACAAAGATCCAGGATG+TGG 0.585960 3_1:+56991264 Msa0364250:CDS
GAAGTAGAAGTGAAAGTGGT+AGG 0.586003 3_1:+56991304 Msa0364250:CDS
AGCTCGAAGCTACTGTAGCT+AGG 0.586804 3_1:+56992830 Msa0364250:CDS
AAGATGTTCATCTCCTGGCT+AGG 0.587176 3_1:+56988655 Msa0364250:CDS
TCTAACTTGAGTGATCATGT+TGG 0.587418 3_1:+56991001 Msa0364250:CDS
CAGCCTAATCAACGCTGCCG+CGG 0.587536 3_1:-56987465 None:intergenic
TGATAGACTTGCTCAAAGAT+GGG 0.589191 3_1:-56995065 None:intergenic
TTTATGCAATAGAGAGGAGT+GGG 0.590421 3_1:+56992766 Msa0364250:intron
AGTAAAACTAAGAATGGGCA+TGG 0.590667 3_1:-56990504 None:intergenic
AGCATATATAGCATTCCTCT+GGG 0.591999 3_1:-56990414 None:intergenic
GGAATTTCAAGACAGTCACT+TGG 0.592961 3_1:-56986790 None:intergenic
ATTGTTATCATGGGATCTGA+GGG 0.593684 3_1:-56995032 None:intergenic
GGAAAAGTTGATTCTACTGG+AGG 0.593921 3_1:+56991496 Msa0364250:CDS
TTTGTGTGGAAAATTTCTGA+AGG 0.594082 3_1:+56988786 Msa0364250:CDS
GTGATAAGGACAATATGATC+AGG 0.594619 3_1:-56989922 None:intergenic
GAAGGCTTGAGGCCGCCCTA+GGG 0.594828 3_1:+56992363 Msa0364250:CDS
TGATCACTCAAGTTAGATTG+TGG 0.594924 3_1:-56990995 None:intergenic
GATGACATGCAATAAAAGAC+GGG 0.595864 3_1:-56995144 None:intergenic
GCTGTGTTCAGACCTCATGA+TGG 0.596771 3_1:+56989856 Msa0364250:CDS
GACAACCTTGGGCTCAAAGG+AGG 0.599545 3_1:-56990947 None:intergenic
CGCCGGATTAACAGCACCAG+AGG 0.600999 3_1:-56987423 None:intergenic
ACAGTTCCAGTTACAAAAGA+GGG 0.601257 3_1:+56992338 Msa0364250:CDS
AAATCGGGAAGTGAAGCTCT+GGG 0.602446 3_1:+56990229 Msa0364250:CDS
TTCGTTGGCAATGACTCTAA+GGG 0.602876 3_1:+56993176 Msa0364250:CDS
TGAGGTCTGAACACAGCAAG+TGG 0.603487 3_1:-56989850 None:intergenic
TTAACAGCACCAGAGGAGAT+GGG 0.604420 3_1:-56987416 None:intergenic
GACGGGGAAGACGGACCTGA+TGG 0.604450 3_1:-56991679 None:intergenic
TGCAGGACATCTCAAATGCA+GGG 0.605690 3_1:-56993062 None:intergenic
GAAGTGAAAGCACTACACCT+TGG 0.605965 3_1:-56994929 None:intergenic
TCTCAGCTAGTGAAGAAGGT+TGG 0.606769 3_1:+56990252 Msa0364250:CDS
GATCCAGGATGTGGTTGATG+TGG 0.607715 3_1:+56991273 Msa0364250:CDS
GAAGCTGAAGCTGGTGATGG+TGG 0.607808 3_1:-56987181 None:intergenic
TAAGGACAATATGATCAGGC+TGG 0.608151 3_1:-56989918 None:intergenic
TCGGTTGAATTGCATGCACT+AGG 0.610664 3_1:-56991703 None:intergenic
TGCTGTTCAAATAGTCGGAG+AGG 0.612426 3_1:+56988854 Msa0364250:CDS
AAAAGTTGATTCTACTGGAG+GGG 0.612535 3_1:+56991498 Msa0364250:CDS
ATCAGCATCACAGGATGGCA+CGG 0.614223 3_1:+56989222 Msa0364250:CDS
TTCTACATTCCAGAAAGGCA+TGG 0.615387 3_1:+56993107 Msa0364250:CDS
GTATTAGATGCAGGTGATGG+TGG 0.615793 3_1:-56991622 None:intergenic
GGGCATGGTCACAGTAAACT+CGG 0.617383 3_1:-56990489 None:intergenic
GTGAGGGAAAGGGTAAGAGG+AGG 0.617899 3_1:-56987132 None:intergenic
AACATTATCATCTACTATCG+CGG 0.618969 3_1:+56992616 Msa0364250:CDS
CCATCAATGAGCTTGTCAAG+AGG 0.619243 3_1:-56989124 None:intergenic
ACTTACATTACAGAGGAACC+TGG 0.621956 3_1:+56991475 Msa0364250:CDS
CCGAGTAGTAAGGTGCCGAA+AGG 0.622586 3_1:+56987488 Msa0364250:CDS
AGATAATGTACAAACCTGGA+AGG 0.622932 3_1:-56992642 None:intergenic
GATTACCAACTTCATGAACA+AGG 0.623210 3_1:+56992502 Msa0364250:CDS
CAAGCAAGTAGCACTGAGAG+TGG 0.625169 3_1:+56990779 Msa0364250:CDS
TGATCATGTTGTGTATGATG+TGG 0.628089 3_1:+56987526 Msa0364250:CDS
CAGATGGCCGTGTCTTTGTG+TGG 0.629133 3_1:+56988772 Msa0364250:CDS
GTGTGAGATCTATCTGATTG+AGG 0.629980 3_1:-56986839 None:intergenic
CCAATGGATGACAAATCGAT+TGG 0.632550 3_1:+56989198 Msa0364250:CDS
AGAGTGTGGTGCGATAGGTG+GGG 0.633015 3_1:+56991450 Msa0364250:CDS
TATGGTCGACAGAGTGAGTG+AGG 0.634229 3_1:+56991240 Msa0364250:CDS
CCAACCTTCCAATGCCGGTG+AGG 0.635391 3_1:+56991531 Msa0364250:CDS
TAACTTGAGTGATCATGTTG+GGG 0.636096 3_1:+56991003 Msa0364250:CDS
GAAAAGTTGATTCTACTGGA+GGG 0.636635 3_1:+56991497 Msa0364250:CDS
TTTGCTTAGAGGGCACACTC+AGG 0.636776 3_1:+56987724 Msa0364250:CDS
TTCCATGCTTCTCCCTAGGG+CGG 0.637783 3_1:-56992375 None:intergenic
ATGATGAACTTGGCAAGCAG+GGG 0.638373 3_1:+56991347 Msa0364250:CDS
TGAAAGTGGTAGGTGAAGCA+AGG 0.639440 3_1:+56991314 Msa0364250:CDS
TTTGTGGGCTAGAATTCAAG+AGG 0.639602 3_1:+56992424 Msa0364250:CDS
GATGGTGTAACCAGATGAGT+TGG 0.640662 3_1:-56991181 None:intergenic
AAAAGAGGGTAGAAGGCTTG+AGG 0.641978 3_1:+56992352 Msa0364250:CDS
AAATAGCAATCCTCAAATTG+CGG 0.643611 3_1:+56991771 Msa0364250:CDS
GTTGAAACAGGGGAATATCA+GGG 0.644466 3_1:+56987673 Msa0364250:CDS
GTGTAGGGAATGAAATTGAA+CGG 0.645057 3_1:-56987262 None:intergenic
AAAACAGGATGCCCATCATG+AGG 0.647371 3_1:-56989868 None:intergenic
GGCCGCCCTAGGGAGAAGCA+TGG 0.647761 3_1:+56992373 Msa0364250:CDS
ATCGGCGCAACCTCAAGCTG+AGG 0.648348 3_1:-56987575 None:intergenic
GCAGAAACAAATGACAATGA+CGG 0.648353 3_1:+56992313 Msa0364250:CDS
ATAGAGAGGAGTGGGCGACA+AGG 0.651126 3_1:+56992774 Msa0364250:intron
CTTTATGCAATAGAGAGGAG+TGG 0.652010 3_1:+56992765 Msa0364250:intron
TTGGTATCAGCATCACAGGA+TGG 0.653833 3_1:+56989217 Msa0364250:CDS
TCCCAAGCAATACTGAAACA+TGG 0.654560 3_1:+56990279 Msa0364250:CDS
GAAAGTGTGCATATCGAAAG+GGG 0.655799 3_1:-56987018 None:intergenic
TTCTGAGCGGAAATATGAGG+AGG 0.657507 3_1:+56994445 Msa0364250:CDS
CTTGAGTAGAGAAGTGCTCG+AGG 0.660682 3_1:+56994161 Msa0364250:CDS
GACCATATTAGTCTCAGAGG+AGG 0.670902 3_1:-56991224 None:intergenic
TGTAGGAACACATGATGGGG+AGG 0.672359 3_1:+56989156 Msa0364250:CDS
TTGAGTAGAGAAGTGCTCGA+GGG 0.672366 3_1:+56994162 Msa0364250:CDS
CCTCCTTCAAATCCTAACGC+CGG 0.674882 3_1:+56987323 Msa0364250:CDS
ATCCAGGATGTGGTTGATGT+GGG 0.675092 3_1:+56991274 Msa0364250:CDS
AGTAAAAGCAGACCTGCATG+AGG 0.678389 3_1:-56990383 None:intergenic
GTCGACCATATTAGTCTCAG+AGG 0.678657 3_1:-56991227 None:intergenic
CTGCCCATCCAGCTGAACAA+CGG 0.685448 3_1:+56994243 Msa0364250:CDS
GAGAGGAGTGGGCGACAAGG+CGG 0.686510 3_1:+56992777 Msa0364250:intron
ACTTGTAGGAACACATGATG+GGG 0.688108 3_1:+56989153 Msa0364250:CDS
TGAACAATATGTTCCCCATG+AGG 0.697153 3_1:-56990545 None:intergenic
CCGGCGTTAGGATTTGAAGG+AGG 0.701239 3_1:-56987323 None:intergenic
GAGATGGGCTGTGATTGTGG+CGG 0.702622 3_1:-56987401 None:intergenic
GGTGATGGTGGTGATCGTAA+GGG 0.706295 3_1:-56987169 None:intergenic
GCTCTCGTGGATGACAGACG+TGG 0.709530 3_1:+56994995 Msa0364250:CDS
TGGGGAGACTTACATTACAG+AGG 0.718194 3_1:+56991468 Msa0364250:CDS
ATTGCATGCACTAGGAGACG+GGG 0.723410 3_1:-56991695 None:intergenic
TAGCAAGGTTGATTTCTGAG+CGG 0.729407 3_1:+56994432 Msa0364250:CDS
TGACGATTAGGATAAACTGG+AGG 0.733228 3_1:+56995394 Msa0364250:three_prime_UTR
AGCACCACTAGATCCCACAA+AGG 0.749952 3_1:+56994406 Msa0364250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAGTATTTTATTTGAA+AGG + chr3_1:56988213-56988232 Msa0364250:intron 10.0%
!!! TTTTTATTTTGATTCATATT+TGG + chr3_1:56989303-56989322 Msa0364250:intron 10.0%
!!! TTTTATTTTGATTCATATTT+GGG + chr3_1:56989304-56989323 Msa0364250:intron 10.0%
!!! TAATATAACTTTTAATAGAA+AGG - chr3_1:56989621-56989640 None:intergenic 10.0%
!!! ATAAATAAAGTTAGTTTTAT+GGG - chr3_1:56990144-56990163 None:intergenic 10.0%
!!! TATAAATAAAGTTAGTTTTA+TGG - chr3_1:56990145-56990164 None:intergenic 10.0%
!! AAAAAAAACATAAAATTAAG+CGG - chr3_1:56993309-56993328 None:intergenic 10.0%
!! TTTAAAAAATAAAAGAATCT+AGG - chr3_1:56993933-56993952 None:intergenic 10.0%
!!! TTCTATTTATTTTTTAACAA+CGG + chr3_1:56995420-56995439 Msa0364250:three_prime_UTR 10.0%
!!! AATAAGTCTTATATTTGTTA+TGG + chr3_1:56987650-56987669 Msa0364250:CDS 15.0%
!!! ATAAGTCTTATATTTGTTAT+GGG + chr3_1:56987651-56987670 Msa0364250:CDS 15.0%
!!! TTTGTAATTGTTTTGTAATT+GGG + chr3_1:56987788-56987807 Msa0364250:intron 15.0%
!!! GTTTTATCTTTATCAATATT+AGG + chr3_1:56987930-56987949 Msa0364250:intron 15.0%
!!! ATTGTAAAGTATTATATTGA+TGG + chr3_1:56988244-56988263 Msa0364250:intron 15.0%
!! ATCAAATTGTATGTTATTAA+TGG + chr3_1:56988538-56988557 Msa0364250:intron 15.0%
!!! TTTTTTTAATTATTCTCAGA+GGG + chr3_1:56988608-56988627 Msa0364250:intron 15.0%
!!! TTAATTAAACATTTTCATTC+AGG + chr3_1:56989003-56989022 Msa0364250:intron 15.0%
!! TCTATTAAAAGTTATATTAC+AGG + chr3_1:56989622-56989641 Msa0364250:intron 15.0%
!! CTATTAAAAGTTATATTACA+GGG + chr3_1:56989623-56989642 Msa0364250:intron 15.0%
!!! TAAATAAAGTTAGTTTTATG+GGG - chr3_1:56990143-56990162 None:intergenic 15.0%
!! AGAATTAAGAGTAAATAATT+TGG + chr3_1:56993238-56993257 Msa0364250:intron 15.0%
!! TAGATGAAAATTAATAATTG+TGG - chr3_1:56993830-56993849 None:intergenic 15.0%
!! TTTAAAAGCTATTAATTTCT+TGG + chr3_1:56993947-56993966 Msa0364250:intron 15.0%
!! TTATTCTCTTGTTCATTTAT+TGG + chr3_1:56987762-56987781 Msa0364250:intron 20.0%
!!! CTTTGTAATTGTTTTGTAAT+TGG + chr3_1:56987787-56987806 Msa0364250:intron 20.0%
!! AAAATTAGAGGAAAAACTTT+AGG + chr3_1:56987811-56987830 Msa0364250:intron 20.0%
!! AAATTAGAGGAAAAACTTTA+GGG + chr3_1:56987812-56987831 Msa0364250:intron 20.0%
!! TAGATTTGATGAAAAAAATG+AGG + chr3_1:56987877-56987896 Msa0364250:intron 20.0%
!! CATATCATAACATTTGTATA+AGG + chr3_1:56987970-56987989 Msa0364250:intron 20.0%
!!! AATAGTTCAATGTTATTTGT+TGG + chr3_1:56988124-56988143 Msa0364250:intron 20.0%
!!! CTGTTATAATTTTGTATGAA+GGG + chr3_1:56988400-56988419 Msa0364250:intron 20.0%
!!! CAGCAAATAAATTTTGAATA+AGG - chr3_1:56988466-56988485 None:intergenic 20.0%
!! CTTATTCAAAATTTATTTGC+TGG + chr3_1:56988464-56988483 Msa0364250:intron 20.0%
!! GATTTAATTAGAGGATAAAA+CGG - chr3_1:56988584-56988603 None:intergenic 20.0%
!! AAAAAGAGAGATTTAATTAG+AGG - chr3_1:56988593-56988612 None:intergenic 20.0%
!!! CTTTTTTTAATTATTCTCAG+AGG + chr3_1:56988607-56988626 Msa0364250:intron 20.0%
!!! TTTTTTCTTTTTTACAGTGT+TGG + chr3_1:56988747-56988766 Msa0364250:intron 20.0%
!! ATTAATATCACAAGAATACA+AGG - chr3_1:56988988-56989007 None:intergenic 20.0%
!! GAAAATCAAACACAAATATA+TGG + chr3_1:56989448-56989467 Msa0364250:intron 20.0%
!! AATATATACAGTAGACTTAA+TGG + chr3_1:56989508-56989527 Msa0364250:intron 20.0%
!! CAATCAAACAAATAAAAAAC+AGG - chr3_1:56989753-56989772 None:intergenic 20.0%
!! AAATGTAACAGATAAAGATA+TGG + chr3_1:56989809-56989828 Msa0364250:intron 20.0%
!! AATGTAACAGATAAAGATAT+GGG + chr3_1:56989810-56989829 Msa0364250:intron 20.0%
!!! AATTGATTTTGTTTTTGAAG+TGG + chr3_1:56990081-56990100 Msa0364250:intron 20.0%
!!! AAATAAAGTTAGTTTTATGG+GGG - chr3_1:56990142-56990161 None:intergenic 20.0%
!! AAAGAAATAAAAAACACATC+TGG - chr3_1:56992109-56992128 None:intergenic 20.0%
!!! TACAACAAAAATGAATGTTT+TGG + chr3_1:56993328-56993347 Msa0364250:intron 20.0%
!! TTCAGTTTATATGGTAATAA+TGG + chr3_1:56994351-56994370 Msa0364250:intron 20.0%
!! TGTCTGTAAAATTGAAAATA+AGG - chr3_1:56994547-56994566 None:intergenic 20.0%
!!! TATTTTATTTAGTTGAGATG+AGG + chr3_1:56994676-56994695 Msa0364250:intron 20.0%
!!! ATTTTATTTAGTTGAGATGA+GGG + chr3_1:56994677-56994696 Msa0364250:intron 20.0%
! ATCAATCTGTGATTAGATTT+GGG - chr3_1:56986920-56986939 None:intergenic 25.0%
! AATCAATCTGTGATTAGATT+TGG - chr3_1:56986921-56986940 None:intergenic 25.0%
! TCAATCAATCAAATTCAATC+TGG + chr3_1:56986955-56986974 Msa0364250:five_prime_UTR 25.0%
! TTTGTAATTGGGAAAATTAG+AGG + chr3_1:56987799-56987818 Msa0364250:intron 25.0%
! AATTAGAGGAAAAACTTTAG+GGG + chr3_1:56987813-56987832 Msa0364250:intron 25.0%
! AGATGAAAAAGATACAAATG+TGG + chr3_1:56988149-56988168 Msa0364250:intron 25.0%
! AAGTAACAGATATCAACAAT+TGG + chr3_1:56988307-56988326 Msa0364250:intron 25.0%
!! GCTGTTATAATTTTGTATGA+AGG + chr3_1:56988399-56988418 Msa0364250:intron 25.0%
!! TGTTGCCTGAAATTTTTAAA+TGG + chr3_1:56988685-56988704 Msa0364250:intron 25.0%
!! TTTGTTTGTCTATGGATTAT+GGG + chr3_1:56988713-56988732 Msa0364250:intron 25.0%
! TTGAACAGCAATAACAATAT+TGG - chr3_1:56988844-56988863 None:intergenic 25.0%
!!! ATTCAGGAAATTTTGATAGT+TGG + chr3_1:56989019-56989038 Msa0364250:intron 25.0%
!!! GAAATTTTGATAGTTGGTAT+GGG + chr3_1:56989025-56989044 Msa0364250:CDS 25.0%
! GATTTCTTCAACAATTTAAG+TGG + chr3_1:56989341-56989360 Msa0364250:intron 25.0%
!! AACTTTTAATAGAAAGGACA+AGG - chr3_1:56989615-56989634 None:intergenic 25.0%
! TTCAAACTAATGAAGATAAC+AGG - chr3_1:56989687-56989706 None:intergenic 25.0%
! AAAAATGTAGCAGAAAAAAC+AGG - chr3_1:56989886-56989905 None:intergenic 25.0%
!!! ATCATTTTTTATAATGCAGC+AGG + chr3_1:56989961-56989980 Msa0364250:intron 25.0%
!! TTGATAACAGTAATGAACTA+CGG - chr3_1:56990114-56990133 None:intergenic 25.0%
!!! TTGTTTTTACTTAACCTTGA+AGG + chr3_1:56990199-56990218 Msa0364250:intron 25.0%
!!! TGTTTTTACTTAACCTTGAA+GGG + chr3_1:56990200-56990219 Msa0364250:intron 25.0%
! TCTTTGTATCGCTATTAAAT+TGG - chr3_1:56991093-56991112 None:intergenic 25.0%
! TGATGACAATAAAAACAAAC+AGG + chr3_1:56991114-56991133 Msa0364250:CDS 25.0%
!!! CTTTTTAGAGTGTATTTAGA+TGG + chr3_1:56991881-56991900 Msa0364250:intron 25.0%
! TAGCGTTTAAAGAGAAAAAT+GGG - chr3_1:56992039-56992058 None:intergenic 25.0%
! AATAAAAAACACATCTGGAT+GGG - chr3_1:56992104-56992123 None:intergenic 25.0%
! AAATAAAAAACACATCTGGA+TGG - chr3_1:56992105-56992124 None:intergenic 25.0%
! ATTTCTTTATATTAAGGCTG+AGG + chr3_1:56992121-56992140 Msa0364250:intron 25.0%
!!! CTACTTTTTTACTTTTTCGA+TGG + chr3_1:56992171-56992190 Msa0364250:intron 25.0%
! AAATACACAAGACAATTCTT+TGG - chr3_1:56992228-56992247 None:intergenic 25.0%
! AAAGAATTGTCTTGTGTATT+TGG + chr3_1:56992227-56992246 Msa0364250:intron 25.0%
! AAGAATTGTCTTGTGTATTT+GGG + chr3_1:56992228-56992247 Msa0364250:intron 25.0%
!! TAGTCCATTTTCTTCTTATT+TGG + chr3_1:56992264-56992283 Msa0364250:intron 25.0%
! TGTGAAATAATTTCATATGC+AGG + chr3_1:56993005-56993024 Msa0364250:intron 25.0%
! TTTAACACTCACTTTCTTAT+TGG + chr3_1:56993669-56993688 Msa0364250:intron 25.0%
! TTAAACACTCACTTCATTAT+TGG - chr3_1:56993767-56993786 None:intergenic 25.0%
! TATATCAAAGCAGAAATAGA+TGG - chr3_1:56993893-56993912 None:intergenic 25.0%
! CCATATAAACTGAATAGTAT+GGG - chr3_1:56994345-56994364 None:intergenic 25.0%
! ACCATATAAACTGAATAGTA+TGG - chr3_1:56994346-56994365 None:intergenic 25.0%
! GTTCAATTATTATCTCTGAT+TGG + chr3_1:56994585-56994604 Msa0364250:intron 25.0%
!! TACATTGTGATATTTTACGA+AGG - chr3_1:56994740-56994759 None:intergenic 25.0%
! TATACTACATGTTAAGGTAA+TGG - chr3_1:56994770-56994789 None:intergenic 25.0%
! TACCTTAACATGTAGTATAT+TGG + chr3_1:56994771-56994790 Msa0364250:intron 25.0%
TCAATCTGTGATTAGATTTG+GGG - chr3_1:56986919-56986938 None:intergenic 30.0%
GGAATTGAGAAGAAATGTTA+GGG - chr3_1:56987076-56987095 None:intergenic 30.0%
TCTGATCCATATTTCGTAAT+CGG - chr3_1:56987596-56987615 None:intergenic 30.0%
!! TATTTGTTATGGGTTGAAAC+AGG + chr3_1:56987661-56987680 Msa0364250:CDS 30.0%
!! ATTTGTTATGGGTTGAAACA+GGG + chr3_1:56987662-56987681 Msa0364250:CDS 30.0%
TATTAGGTCAAAAGAGTTTG+TGG + chr3_1:56987946-56987965 Msa0364250:intron 30.0%
TCTTTATGAATGTTTGCTCT+AGG + chr3_1:56988058-56988077 Msa0364250:intron 30.0%
!! TGTTTTGTTAATTGTAGCAG+AGG + chr3_1:56988431-56988450 Msa0364250:intron 30.0%
TTAATGGCATAATCACTGAA+AGG + chr3_1:56988554-56988573 Msa0364250:intron 30.0%
CAAGGCCATTTAAAAATTTC+AGG - chr3_1:56988693-56988712 None:intergenic 30.0%
AATCCATAGACAAACAAACA+AGG - chr3_1:56988711-56988730 None:intergenic 30.0%
! GTTTGTTTGTCTATGGATTA+TGG + chr3_1:56988712-56988731 Msa0364250:intron 30.0%
! AAATTTTCCACACAAAGACA+CGG - chr3_1:56988782-56988801 None:intergenic 30.0%
TTTGTGTGGAAAATTTCTGA+AGG + chr3_1:56988786-56988805 Msa0364250:CDS 30.0%
ACAATATTGGCAGTAATTTG+AGG - chr3_1:56988831-56988850 None:intergenic 30.0%
! GTTATTGCTGTTCAAATAGT+CGG + chr3_1:56988849-56988868 Msa0364250:CDS 30.0%
ACAACAAAACAAGATAGTGT+TGG - chr3_1:56988932-56988951 None:intergenic 30.0%
! GTTCTAAATCCTAAAAGCAA+TGG + chr3_1:56988950-56988969 Msa0364250:intron 30.0%
! AATCCTAAAAGCAATGGTTT+TGG + chr3_1:56988956-56988975 Msa0364250:intron 30.0%
!! AAACCAAAACCATTGCTTTT+AGG - chr3_1:56988962-56988981 None:intergenic 30.0%
!! GGAAATTTTGATAGTTGGTA+TGG + chr3_1:56989024-56989043 Msa0364250:intron 30.0%
GATGAGATTAAATAATGCAG+TGG + chr3_1:56989363-56989382 Msa0364250:intron 30.0%
GAATGTTCTTTGAACATATG+TGG + chr3_1:56989389-56989408 Msa0364250:intron 30.0%
AGTCACTAGAAAGATAACAA+TGG + chr3_1:56989475-56989494 Msa0364250:intron 30.0%
TGGGAAACAAATATGAATCT+GGG + chr3_1:56989555-56989574 Msa0364250:intron 30.0%
! ATATTACAGGGTTGTTTCAT+TGG + chr3_1:56989635-56989654 Msa0364250:intron 30.0%
! TATTACAGGGTTGTTTCATT+GGG + chr3_1:56989636-56989655 Msa0364250:intron 30.0%
GTTTCATTGGGAAAAATTAC+TGG + chr3_1:56989648-56989667 Msa0364250:intron 30.0%
AATAGAAGACAAACGTGATT+AGG - chr3_1:56989786-56989805 None:intergenic 30.0%
AGATAAAGATATGGGAAGAT+CGG + chr3_1:56989818-56989837 Msa0364250:intron 30.0%
GTTCCAGTAAAACTAAGAAT+GGG - chr3_1:56990512-56990531 None:intergenic 30.0%
TGTTCCAGTAAAACTAAGAA+TGG - chr3_1:56990513-56990532 None:intergenic 30.0%
CAGAATAATCATTAACAGCT+TGG - chr3_1:56991030-56991049 None:intergenic 30.0%
TTATTCTGTTGACAGACAAA+TGG + chr3_1:56991042-56991061 Msa0364250:CDS 30.0%
TGTATCGCTATTAAATTGGT+CGG - chr3_1:56991089-56991108 None:intergenic 30.0%
GTTGCTTAAAAATGACAGAA+GGG - chr3_1:56991162-56991181 None:intergenic 30.0%
!!! CCAAGTTCATCATTTTGATT+AGG - chr3_1:56991340-56991359 None:intergenic 30.0%
CCTAATCAAAATGATGAACT+TGG + chr3_1:56991337-56991356 Msa0364250:CDS 30.0%
! AGAAAAATTCTTTTGCTCTC+AGG + chr3_1:56991399-56991418 Msa0364250:CDS 30.0%
! TGAAATTCCATTTGGTTCAT+TGG - chr3_1:56991734-56991753 None:intergenic 30.0%
!!! GATTGCTATTTTCAGTACAT+GGG - chr3_1:56991762-56991781 None:intergenic 30.0%
AAATAGCAATCCTCAAATTG+CGG + chr3_1:56991771-56991790 Msa0364250:CDS 30.0%
! ATCGATGGGAAGTTTTTATT+TGG - chr3_1:56991979-56991998 None:intergenic 30.0%
CTAGCGTTTAAAGAGAAAAA+TGG - chr3_1:56992040-56992059 None:intergenic 30.0%
ACTGCCAAATAAGAAGAAAA+TGG - chr3_1:56992271-56992290 None:intergenic 30.0%
TAATCAAACCTGTAACATGT+TGG - chr3_1:56992487-56992506 None:intergenic 30.0%
ATTGGAGAAAACTGTAAAGA+AGG + chr3_1:56992538-56992557 Msa0364250:CDS 30.0%
! GATAATGTTTTCTCAATAGC+AGG - chr3_1:56992605-56992624 None:intergenic 30.0%
AACATTATCATCTACTATCG+CGG + chr3_1:56992616-56992635 Msa0364250:CDS 30.0%
TCAAAGATAATGTACAAACC+TGG - chr3_1:56992649-56992668 None:intergenic 30.0%
!!! ATGAATGTTTTGGCTTAATG+TGG + chr3_1:56993338-56993357 Msa0364250:intron 30.0%
!!! TGAATGTTTTGGCTTAATGT+GGG + chr3_1:56993339-56993358 Msa0364250:intron 30.0%
ATACAAAACAACAGGGTAAA+GGG - chr3_1:56993376-56993395 None:intergenic 30.0%
AATACAAAACAACAGGGTAA+AGG - chr3_1:56993377-56993396 None:intergenic 30.0%
GCATCAAATACAAAACAACA+GGG - chr3_1:56993383-56993402 None:intergenic 30.0%
AGCATCAAATACAAAACAAC+AGG - chr3_1:56993384-56993403 None:intergenic 30.0%
! TGCAAGTAATTTGAGACATT+TGG - chr3_1:56993416-56993435 None:intergenic 30.0%
AAATGTCTCAAATTACTTGC+AGG + chr3_1:56993415-56993434 Msa0364250:intron 30.0%
AATGTCTCAAATTACTTGCA+GGG + chr3_1:56993416-56993435 Msa0364250:intron 30.0%
TACAGTGAAAGAGAAAACAT+GGG + chr3_1:56993509-56993528 Msa0364250:intron 30.0%
AATTGCAATTAATATCCGAG+TGG - chr3_1:56993570-56993589 None:intergenic 30.0%
CTCGGATATTAATTGCAATT+TGG + chr3_1:56993570-56993589 Msa0364250:intron 30.0%
AAGAAAGTGAGTGTTAAAGA+GGG - chr3_1:56993667-56993686 None:intergenic 30.0%
TAAGAAAGTGAGTGTTAAAG+AGG - chr3_1:56993668-56993687 None:intergenic 30.0%
!! TTCATTATTGGCTCAAATCA+AGG - chr3_1:56993755-56993774 None:intergenic 30.0%
! TCTAGACTAGATAAAGCTTT+TGG + chr3_1:56994030-56994049 Msa0364250:intron 30.0%
AGAATACCAACATTGAGATA+CGG - chr3_1:56994088-56994107 None:intergenic 30.0%
! AACTGATGATGCTGAATTAA+TGG - chr3_1:56994133-56994152 None:intergenic 30.0%
CTTTACTTCATGAAAAGGTA+GGG + chr3_1:56994268-56994287 Msa0364250:intron 30.0%
CCCATACTATTCAGTTTATA+TGG + chr3_1:56994342-56994361 Msa0364250:intron 30.0%
!! GCAATTTTGTTATGCATATC+AGG + chr3_1:56994379-56994398 Msa0364250:intron 30.0%
GTGATGTATCTATTGTATCT+TGG + chr3_1:56994492-56994511 Msa0364250:CDS 30.0%
ATAATTGAACACATTCCAAC+AGG - chr3_1:56994575-56994594 None:intergenic 30.0%
! ATTATTATCTCTGATTGGCT+TGG + chr3_1:56994590-56994609 Msa0364250:intron 30.0%
!! TTATTATCTCTGATTGGCTT+GGG + chr3_1:56994591-56994610 Msa0364250:intron 30.0%
!! AGATGAGGGATTTTAATGTA+GGG + chr3_1:56994691-56994710 Msa0364250:intron 30.0%
GACCAATATACTACATGTTA+AGG - chr3_1:56994776-56994795 None:intergenic 30.0%
TTTAATGCTTGGCTGAAATA+AGG - chr3_1:56994798-56994817 None:intergenic 30.0%
CTGAACTTCAATTTAATGCT+TGG - chr3_1:56994809-56994828 None:intergenic 30.0%
GTCAATTACATATACACAAC+AGG - chr3_1:56994832-56994851 None:intergenic 30.0%
! TTTACATGGACTTTTGACAT+TGG + chr3_1:56994890-56994909 Msa0364250:CDS 30.0%
TGATGACATGCAATAAAAGA+CGG - chr3_1:56995148-56995167 None:intergenic 30.0%
TTGAACTCTTCTGATACAAT+TGG + chr3_1:56995224-56995243 Msa0364250:three_prime_UTR 30.0%
TAAACTGTCAAATATTCAGC+TGG + chr3_1:56995298-56995317 Msa0364250:three_prime_UTR 30.0%
ATCTATCTGATTGAGGAAGA+AGG - chr3_1:56986835-56986854 None:intergenic 35.0%
! AGATTTGGGGAATTTTGTGA+AGG - chr3_1:56986906-56986925 None:intergenic 35.0%
! AGAAAGTGTGCATATCGAAA+GGG - chr3_1:56987022-56987041 None:intergenic 35.0%
! AAGAAAGTGTGCATATCGAA+AGG - chr3_1:56987023-56987042 None:intergenic 35.0%
AAATGTTAGGGTTAGGGTTA+GGG - chr3_1:56987064-56987083 None:intergenic 35.0%
GAGAAGAAATGTTAGGGTTA+GGG - chr3_1:56987070-56987089 None:intergenic 35.0%
TGAGAAGAAATGTTAGGGTT+AGG - chr3_1:56987071-56987090 None:intergenic 35.0%
GGGAATTGAGAAGAAATGTT+AGG - chr3_1:56987077-56987096 None:intergenic 35.0%
! TATTGTTGTTGTGAGGGAAA+GGG - chr3_1:56987145-56987164 None:intergenic 35.0%
! TTATTGTTGTTGTGAGGGAA+AGG - chr3_1:56987146-56987165 None:intergenic 35.0%
! GGTAGTTATTGTTGTTGTGA+GGG - chr3_1:56987151-56987170 None:intergenic 35.0%
!!! AATTGGTCTGGTTTTGTTGA+TGG - chr3_1:56987229-56987248 None:intergenic 35.0%
GTTGAATTGGAAAATTGGTC+TGG - chr3_1:56987241-56987260 None:intergenic 35.0%
! ACGGTGTTGAATTGGAAAAT+TGG - chr3_1:56987246-56987265 None:intergenic 35.0%
! GAAATTGAACGGTGTTGAAT+TGG - chr3_1:56987254-56987273 None:intergenic 35.0%
GTGTAGGGAATGAAATTGAA+CGG - chr3_1:56987265-56987284 None:intergenic 35.0%
TGATCATGTTGTGTATGATG+TGG + chr3_1:56987526-56987545 Msa0364250:CDS 35.0%
TTGTGTATGATGTGGATGTT+AGG + chr3_1:56987534-56987553 Msa0364250:CDS 35.0%
ATATGGATCAGATCCTAATC+CGG + chr3_1:56987604-56987623 Msa0364250:CDS 35.0%
! TTTGTTATGGGTTGAAACAG+GGG + chr3_1:56987663-56987682 Msa0364250:CDS 35.0%
CTGTTAGATCTTTGCTTAGA+GGG + chr3_1:56987714-56987733 Msa0364250:CDS 35.0%
! TTATGAATGTTTGCTCTAGG+TGG + chr3_1:56988061-56988080 Msa0364250:intron 35.0%
CGCTCGAGAAAATAATAAAG+TGG - chr3_1:56988270-56988289 None:intergenic 35.0%
! CACATGATAGATTTTTCCTC+TGG + chr3_1:56988340-56988359 Msa0364250:intron 35.0%
CAATTTGATCGCATTAGAGT+TGG - chr3_1:56988527-56988546 None:intergenic 35.0%
TTGAACATCCTCAAATTTGC+TGG + chr3_1:56988883-56988902 Msa0364250:CDS 35.0%
GTTGGACAATTACTTGTTTG+TGG - chr3_1:56988914-56988933 None:intergenic 35.0%
AGAATTGACACCACAAAAGT+TGG + chr3_1:56989061-56989080 Msa0364250:CDS 35.0%
! TTCACCATTTCCAACTTTTG+TGG - chr3_1:56989074-56989093 None:intergenic 35.0%
AACTTGTAGGAACACATGAT+GGG + chr3_1:56989152-56989171 Msa0364250:CDS 35.0%
CACTAGAAAGATAACAATGG+AGG + chr3_1:56989478-56989497 Msa0364250:intron 35.0%
GACTTAATGGCAGAAAAACT+AGG + chr3_1:56989521-56989540 Msa0364250:intron 35.0%
TAATGGCAGAAAAACTAGGA+AGG + chr3_1:56989525-56989544 Msa0364250:intron 35.0%
GTGGGAAACAAATATGAATC+TGG + chr3_1:56989554-56989573 Msa0364250:intron 35.0%
CAGGATATAAGCATGCATAA+GGG - chr3_1:56989734-56989753 None:intergenic 35.0%
ACAGGATATAAGCATGCATA+AGG - chr3_1:56989735-56989754 None:intergenic 35.0%
GTGATAAGGACAATATGATC+AGG - chr3_1:56989925-56989944 None:intergenic 35.0%
AACAAGTATCACGAGAATAG+TGG - chr3_1:56990175-56990194 None:intergenic 35.0%
TCCATGTTTCAGTATTGCTT+GGG - chr3_1:56990283-56990302 None:intergenic 35.0%
TTCCATGTTTCAGTATTGCT+TGG - chr3_1:56990284-56990303 None:intergenic 35.0%
AAGAATGCATCCTTAAGAGA+CGG - chr3_1:56990344-56990363 None:intergenic 35.0%
AGCATATATAGCATTCCTCT+GGG - chr3_1:56990417-56990436 None:intergenic 35.0%
!! ATAATCCATGCGAGTTGATT+CGG - chr3_1:56990465-56990484 None:intergenic 35.0%
AGTAAAACTAAGAATGGGCA+TGG - chr3_1:56990507-56990526 None:intergenic 35.0%
!!! ATGCCCATTCTTAGTTTTAC+TGG + chr3_1:56990506-56990525 Msa0364250:CDS 35.0%
! ACAAGTGATATTTTGCCTCA+TGG + chr3_1:56990530-56990549 Msa0364250:CDS 35.0%
! CAAGTGATATTTTGCCTCAT+GGG + chr3_1:56990531-56990550 Msa0364250:CDS 35.0%
! AAGTGATATTTTGCCTCATG+GGG + chr3_1:56990532-56990551 Msa0364250:CDS 35.0%
!!! ATTGTTTTGGGAGTAGAACT+GGG - chr3_1:56990755-56990774 None:intergenic 35.0%
! CTTGCTTGCATCATTGTTTT+GGG - chr3_1:56990767-56990786 None:intergenic 35.0%
! ACTTGCTTGCATCATTGTTT+TGG - chr3_1:56990768-56990787 None:intergenic 35.0%
!! CTGCTGATTTGTCTAGAAAT+AGG - chr3_1:56990848-56990867 None:intergenic 35.0%
TGAAGCTAAAACTGTTACAC+TGG + chr3_1:56990877-56990896 Msa0364250:CDS 35.0%
ATATCAGCATCACTACTAGA+AGG - chr3_1:56990905-56990924 None:intergenic 35.0%
TGATCACTCAAGTTAGATTG+TGG - chr3_1:56990998-56991017 None:intergenic 35.0%
TCTAACTTGAGTGATCATGT+TGG + chr3_1:56991001-56991020 Msa0364250:CDS 35.0%
CTAACTTGAGTGATCATGTT+GGG + chr3_1:56991002-56991021 Msa0364250:CDS 35.0%
TAACTTGAGTGATCATGTTG+GGG + chr3_1:56991003-56991022 Msa0364250:CDS 35.0%
GACAAATGGATACAATTCAC+AGG + chr3_1:56991056-56991075 Msa0364250:CDS 35.0%
GGTTGCTTAAAAATGACAGA+AGG - chr3_1:56991163-56991182 None:intergenic 35.0%
! TTTTAAGCAACCAACTCATC+TGG + chr3_1:56991171-56991190 Msa0364250:CDS 35.0%
TACCACTTTCACTTCTACTT+CGG - chr3_1:56991305-56991324 None:intergenic 35.0%
TTTCTTTGCCATCAGAAACT+GGG - chr3_1:56991384-56991403 None:intergenic 35.0%
! TTTTCTTTGCCATCAGAAAC+TGG - chr3_1:56991385-56991404 None:intergenic 35.0%
! GAAAAGTTGATTCTACTGGA+GGG + chr3_1:56991497-56991516 Msa0364250:CDS 35.0%
! AAAAGTTGATTCTACTGGAG+GGG + chr3_1:56991498-56991517 Msa0364250:CDS 35.0%
! ACCTTTTCATGGACATCTTT+TGG - chr3_1:56991574-56991593 None:intergenic 35.0%
TACCATTGATGTAGATGAGT+CGG - chr3_1:56991599-56991618 None:intergenic 35.0%
TTTGTATTAGATGCAGGTGA+TGG - chr3_1:56991628-56991647 None:intergenic 35.0%
TCACCTGCATCTAATACAAA+AGG + chr3_1:56991628-56991647 Msa0364250:CDS 35.0%
CACCTGCATCTAATACAAAA+GGG + chr3_1:56991629-56991648 Msa0364250:CDS 35.0%
! TTCCCTTTTGTATTAGATGC+AGG - chr3_1:56991634-56991653 None:intergenic 35.0%
TACAAAAGGGAAGAGACAAA+AGG + chr3_1:56991642-56991661 Msa0364250:CDS 35.0%
ACAAAAGGGAAGAGACAAAA+GGG + chr3_1:56991643-56991662 Msa0364250:CDS 35.0%
! ATTTGGTTCATTGGACGAAT+CGG - chr3_1:56991725-56991744 None:intergenic 35.0%
!!! GGATTGCTATTTTCAGTACA+TGG - chr3_1:56991763-56991782 None:intergenic 35.0%
AATGCAAGATTCACTCAATC+AGG + chr3_1:56991795-56991814 Msa0364250:CDS 35.0%
TTCCCATCGATGTATTCTTA+AGG + chr3_1:56991988-56992007 Msa0364250:intron 35.0%
GTCCTTAAGAATACATCGAT+GGG - chr3_1:56991993-56992012 None:intergenic 35.0%
AGTCCTTAAGAATACATCGA+TGG - chr3_1:56991994-56992013 None:intergenic 35.0%
CGTTTAAAGAGAAAAATGGG+AGG - chr3_1:56992036-56992055 None:intergenic 35.0%
GCAGTTATTGACAATGCAAA+AGG + chr3_1:56992286-56992305 Msa0364250:intron 35.0%
GCAGAAACAAATGACAATGA+CGG + chr3_1:56992313-56992332 Msa0364250:CDS 35.0%
AACAGTTCCAGTTACAAAAG+AGG + chr3_1:56992337-56992356 Msa0364250:CDS 35.0%
ACAGTTCCAGTTACAAAAGA+GGG + chr3_1:56992338-56992357 Msa0364250:CDS 35.0%
AACCTGTAACATGTTGGAAA+CGG - chr3_1:56992481-56992500 None:intergenic 35.0%
GATTACCAACTTCATGAACA+AGG + chr3_1:56992502-56992521 Msa0364250:CDS 35.0%
TAGATCCTTGTTCATGAAGT+TGG - chr3_1:56992510-56992529 None:intergenic 35.0%
AGATAATGTACAAACCTGGA+AGG - chr3_1:56992645-56992664 None:intergenic 35.0%
ATACAATGATGTTGTCTTGC+TGG + chr3_1:56992729-56992748 Msa0364250:intron 35.0%
TACAATGATGTTGTCTTGCT+GGG + chr3_1:56992730-56992749 Msa0364250:intron 35.0%
TTTATGCAATAGAGAGGAGT+GGG + chr3_1:56992766-56992785 Msa0364250:intron 35.0%
!! TTGCTATTTGTGATTTCACG+AGG + chr3_1:56992966-56992985 Msa0364250:intron 35.0%
! AGAATCAACTTGCTCAAACA+TGG - chr3_1:56993091-56993110 None:intergenic 35.0%
! GTTGATTCTACATTCCAGAA+AGG + chr3_1:56993102-56993121 Msa0364250:CDS 35.0%
ACAGAGTATGCTTGTTCATT+TGG + chr3_1:56993205-56993224 Msa0364250:intron 35.0%
CAGAGTATGCTTGTTCATTT+GGG + chr3_1:56993206-56993225 Msa0364250:intron 35.0%
AGAGTATGCTTGTTCATTTG+GGG + chr3_1:56993207-56993226 Msa0364250:intron 35.0%
! AGTAATTTGAGACATTTGGC+AGG - chr3_1:56993412-56993431 None:intergenic 35.0%
ATGTCTCAAATTACTTGCAG+GGG + chr3_1:56993417-56993436 Msa0364250:intron 35.0%
AGTAGAGAGACAGAAAACAT+GGG - chr3_1:56993476-56993495 None:intergenic 35.0%
CTACAGTGAAAGAGAAAACA+TGG + chr3_1:56993508-56993527 Msa0364250:intron 35.0%
ACAGTGAAAGAGAAAACATG+GGG + chr3_1:56993510-56993529 Msa0364250:intron 35.0%
!! ATATGTTCCACCACTTTTAG+TGG + chr3_1:56993703-56993722 Msa0364250:intron 35.0%
GGGTATCACATATTGGAAAT+GGG - chr3_1:56993731-56993750 None:intergenic 35.0%
TGGGTATCACATATTGGAAA+TGG - chr3_1:56993732-56993751 None:intergenic 35.0%
!! TTATTGGCTCAAATCAAGGT+GGG - chr3_1:56993751-56993770 None:intergenic 35.0%
!! ATTATTGGCTCAAATCAAGG+TGG - chr3_1:56993752-56993771 None:intergenic 35.0%
! CTAGATAAAGCTTTTGGACA+TGG + chr3_1:56994036-56994055 Msa0364250:intron 35.0%
TTGGACATGGTACTCTTATA+TGG + chr3_1:56994049-56994068 Msa0364250:intron 35.0%
!!! TTCTTCGTGATGTTTTTTGC+AGG + chr3_1:56994104-56994123 Msa0364250:intron 35.0%
! CCTACCTTTTCATGAAGTAA+AGG - chr3_1:56994270-56994289 None:intergenic 35.0%
CCTTTACTTCATGAAAAGGT+AGG + chr3_1:56994267-56994286 Msa0364250:intron 35.0%
! AAGGGTTTTTAATGTAGCAG+AGG + chr3_1:56994635-56994654 Msa0364250:intron 35.0%
! AGGGTTTTTAATGTAGCAGA+GGG + chr3_1:56994636-56994655 Msa0364250:intron 35.0%
!! GAGATGAGGGATTTTAATGT+AGG + chr3_1:56994690-56994709 Msa0364250:intron 35.0%
AAGTGAAGTGATTCTCTTGA+TGG - chr3_1:56994854-56994873 None:intergenic 35.0%
ATTGTTATCATGGGATCTGA+GGG - chr3_1:56995035-56995054 None:intergenic 35.0%
! TGATAGACTTGCTCAAAGAT+GGG - chr3_1:56995068-56995087 None:intergenic 35.0%
GATGACATGCAATAAAAGAC+GGG - chr3_1:56995147-56995166 None:intergenic 35.0%
GTACAAAGTTGTGAGTTTCA+TGG + chr3_1:56995253-56995272 Msa0364250:three_prime_UTR 35.0%
AAGTTGTGAGTTTCATGGAT+AGG + chr3_1:56995258-56995277 Msa0364250:three_prime_UTR 35.0%
AGTTGTGAGTTTCATGGATA+GGG + chr3_1:56995259-56995278 Msa0364250:three_prime_UTR 35.0%
TTCATGGATAGGGTCAAAAT+CGG + chr3_1:56995269-56995288 Msa0364250:three_prime_UTR 35.0%
CTCAATTTAGACACTGTATC+TGG + chr3_1:56995338-56995357 Msa0364250:three_prime_UTR 35.0%
TGTTGACGATTAGGATAAAC+TGG + chr3_1:56995391-56995410 Msa0364250:three_prime_UTR 35.0%
TTAACAACGGTTGCAACTAT+TGG + chr3_1:56995433-56995452 Msa0364250:three_prime_UTR 35.0%
GGAATTTCAAGACAGTCACT+TGG - chr3_1:56986793-56986812 None:intergenic 40.0%
GTGTGAGATCTATCTGATTG+AGG - chr3_1:56986842-56986861 None:intergenic 40.0%
! GAAAGTGTGCATATCGAAAG+GGG - chr3_1:56987021-56987040 None:intergenic 40.0%
GAAATGTTAGGGTTAGGGTT+AGG - chr3_1:56987065-56987084 None:intergenic 40.0%
! GGGTAGTTATTGTTGTTGTG+AGG - chr3_1:56987152-56987171 None:intergenic 40.0%
! TTGTTGTTGTTGGATTGGAG+GGG - chr3_1:56987375-56987394 None:intergenic 40.0%
! GTTGTTGTTGTTGGATTGGA+GGG - chr3_1:56987376-56987395 None:intergenic 40.0%
CCAATCAAATGCCTTCCTTT+CGG - chr3_1:56987506-56987525 None:intergenic 40.0%
! ATCAGATCCTAATCCGGTTT+TGG + chr3_1:56987610-56987629 Msa0364250:CDS 40.0%
! TCAGATCCTAATCCGGTTTT+GGG + chr3_1:56987611-56987630 Msa0364250:CDS 40.0%
GTTGAAACAGGGGAATATCA+GGG + chr3_1:56987673-56987692 Msa0364250:CDS 40.0%
GCTGTTAGATCTTTGCTTAG+AGG + chr3_1:56987713-56987732 Msa0364250:CDS 40.0%
AAGAAGCAAAGAAATGCCAG+AGG - chr3_1:56988359-56988378 None:intergenic 40.0%
TCTGGCATTTCTTTGCTTCT+TGG + chr3_1:56988358-56988377 Msa0364250:intron 40.0%
!! TGGCCTTGTTTGTTTGTCTA+TGG + chr3_1:56988705-56988724 Msa0364250:intron 40.0%
!!! TTTTACAGTGTTGGCACAGA+TGG + chr3_1:56988756-56988775 Msa0364250:intron 40.0%
! GTGGAAAATTTCTGAAGGTC+CGG + chr3_1:56988791-56988810 Msa0364250:CDS 40.0%
TGAGGCTTATCTTCATCATC+CGG - chr3_1:56988813-56988832 None:intergenic 40.0%
GACACCACAAAAGTTGGAAA+TGG + chr3_1:56989067-56989086 Msa0364250:CDS 40.0%
! TTGTCAAGAGGACATTTTGG+AGG - chr3_1:56989115-56989134 None:intergenic 40.0%
! AGCTTGTCAAGAGGACATTT+TGG - chr3_1:56989118-56989137 None:intergenic 40.0%
CTCTTGACAAGCTCATTGAT+GGG + chr3_1:56989125-56989144 Msa0364250:CDS 40.0%
TCTTGACAAGCTCATTGATG+GGG + chr3_1:56989126-56989145 Msa0364250:CDS 40.0%
ATTGATGGGGTTCAACTTGT+AGG + chr3_1:56989139-56989158 Msa0364250:CDS 40.0%
CAACTTGTAGGAACACATGA+TGG + chr3_1:56989151-56989170 Msa0364250:CDS 40.0%
ACTTGTAGGAACACATGATG+GGG + chr3_1:56989153-56989172 Msa0364250:CDS 40.0%
! CTGATTTGTCAATGTGCCAA+TGG + chr3_1:56989182-56989201 Msa0364250:CDS 40.0%
!! CCAATCGATTTGTCATCCAT+TGG - chr3_1:56989201-56989220 None:intergenic 40.0%
CCAATGGATGACAAATCGAT+TGG + chr3_1:56989198-56989217 Msa0364250:CDS 40.0%
AAAACTAGGAAGGACAAGAG+TGG + chr3_1:56989535-56989554 Msa0364250:intron 40.0%
AAACTAGGAAGGACAAGAGT+GGG + chr3_1:56989536-56989555 Msa0364250:intron 40.0%
TAGAAAGGACAAGGTTCTGT+TGG - chr3_1:56989606-56989625 None:intergenic 40.0%
AGAAGACAAACGTGATTAGG+AGG - chr3_1:56989783-56989802 None:intergenic 40.0%
TAAGGACAATATGATCAGGC+TGG - chr3_1:56989921-56989940 None:intergenic 40.0%
ACACACTTACTGCTGTGATA+AGG - chr3_1:56989939-56989958 None:intergenic 40.0%
! TTTTTATAATGCAGCAGGCC+AGG + chr3_1:56989966-56989985 Msa0364250:intron 40.0%
GAAAGACAAATTCAGAGACC+TGG - chr3_1:56989987-56990006 None:intergenic 40.0%
TCCCAAGCAATACTGAAACA+TGG + chr3_1:56990279-56990298 Msa0364250:CDS 40.0%
ATGGAAATGCACTCAGACTT+TGG + chr3_1:56990298-56990317 Msa0364250:CDS 40.0%
! TTTTACTTGCAAATGCCCAG+AGG + chr3_1:56990399-56990418 Msa0364250:CDS 40.0%
CAGCATATATAGCATTCCTC+TGG - chr3_1:56990418-56990437 None:intergenic 40.0%
TGCTATATATGCTGTGCACT+TGG + chr3_1:56990424-56990443 Msa0364250:CDS 40.0%
TATGCTGTGCACTTGGAATA+TGG + chr3_1:56990431-56990450 Msa0364250:CDS 40.0%
!! TAATCCATGCGAGTTGATTC+GGG - chr3_1:56990464-56990483 None:intergenic 40.0%
TGAACAATATGTTCCCCATG+AGG - chr3_1:56990548-56990567 None:intergenic 40.0%
TCATGGGGAACATATTGTTC+AGG + chr3_1:56990547-56990566 Msa0364250:CDS 40.0%
GGTTTATTGTGTTCAGACAC+TGG + chr3_1:56990568-56990587 Msa0364250:CDS 40.0%
! TCAGCAGTATGCTTTGGATT+TGG + chr3_1:56990595-56990614 Msa0364250:CDS 40.0%
! TCTAGTCCCGCATTTTCTAA+TGG - chr3_1:56990638-56990657 None:intergenic 40.0%
AATTGCATCTCGTGAAACAC+TGG - chr3_1:56990672-56990691 None:intergenic 40.0%
!!! CATTGTTTTGGGAGTAGAAC+TGG - chr3_1:56990756-56990775 None:intergenic 40.0%
TCAAGATACCCTTTAAGCTC+AGG + chr3_1:56990809-56990828 Msa0364250:CDS 40.0%
CAGTATGACCTGAGCTTAAA+GGG - chr3_1:56990820-56990839 None:intergenic 40.0%
TCAGTATGACCTGAGCTTAA+AGG - chr3_1:56990821-56990840 None:intergenic 40.0%
!! CTGGCTTTTGTAATCTCAGA+TGG - chr3_1:56991202-56991221 None:intergenic 40.0%
!! TTCCTCCTCTGAGACTAATA+TGG + chr3_1:56991222-56991241 Msa0364250:CDS 40.0%
TGAGGTAGAAACAAAGATCC+AGG + chr3_1:56991258-56991277 Msa0364250:CDS 40.0%
AGAAACAAAGATCCAGGATG+TGG + chr3_1:56991264-56991283 Msa0364250:CDS 40.0%
GAAGTAGAAGTGAAAGTGGT+AGG + chr3_1:56991304-56991323 Msa0364250:CDS 40.0%
AAATGATGAACTTGGCAAGC+AGG + chr3_1:56991345-56991364 Msa0364250:CDS 40.0%
AATGATGAACTTGGCAAGCA+GGG + chr3_1:56991346-56991365 Msa0364250:CDS 40.0%
!!! TCAGAAACTGGGTTTTGTTG+TGG - chr3_1:56991373-56991392 None:intergenic 40.0%
CAACAAAACCCAGTTTCTGA+TGG + chr3_1:56991373-56991392 Msa0364250:CDS 40.0%
! TTCTGATCTTGGCATTGAGA+TGG + chr3_1:56991423-56991442 Msa0364250:CDS 40.0%
ACTTACATTACAGAGGAACC+TGG + chr3_1:56991475-56991494 Msa0364250:CDS 40.0%
! CCAGTAGAATCAACTTTTCC+AGG - chr3_1:56991496-56991515 None:intergenic 40.0%
! CCTGGAAAAGTTGATTCTAC+TGG + chr3_1:56991493-56991512 Msa0364250:CDS 40.0%
! GGAAAAGTTGATTCTACTGG+AGG + chr3_1:56991496-56991515 Msa0364250:CDS 40.0%
GCCAAAAGATGTCCATGAAA+AGG + chr3_1:56991570-56991589 Msa0364250:CDS 40.0%
! ATGAGTCGGAAACCTTTTCA+TGG - chr3_1:56991585-56991604 None:intergenic 40.0%
TTCCGACTCATCTACATCAA+TGG + chr3_1:56991594-56991613 Msa0364250:CDS 40.0%
GATTCGTCCAATGAACCAAA+TGG + chr3_1:56991724-56991743 Msa0364250:CDS 40.0%
! GGGAGGTTTGAAATTCCATT+TGG - chr3_1:56991742-56991761 None:intergenic 40.0%
!!! TGCTATTTTCAGTACATGGG+AGG - chr3_1:56991759-56991778 None:intergenic 40.0%
ACTCAATCAGGTGATTACTC+AGG + chr3_1:56991807-56991826 Msa0364250:intron 40.0%
! CTTCTACCCTCTTTTGTAAC+TGG - chr3_1:56992347-56992366 None:intergenic 40.0%
CAGTTACAAAAGAGGGTAGA+AGG + chr3_1:56992345-56992364 Msa0364250:CDS 40.0%
! TTTTTCCATGCTTCTCCCTA+GGG - chr3_1:56992381-56992400 None:intergenic 40.0%
!! TTTGTGGGCTAGAATTCAAG+AGG + chr3_1:56992424-56992443 Msa0364250:CDS 40.0%
TTGTCTTGCTGGGATCTAAT+TGG + chr3_1:56992740-56992759 Msa0364250:intron 40.0%
TGGCACTTTATGCAATAGAG+AGG + chr3_1:56992760-56992779 Msa0364250:intron 40.0%
CTTTATGCAATAGAGAGGAG+TGG + chr3_1:56992765-56992784 Msa0364250:intron 40.0%
GTTTCAGACAACTGTCAAAC+AGG + chr3_1:56992867-56992886 Msa0364250:CDS 40.0%
!!! ATCCAGTTTTGAAACGACAG+TGG + chr3_1:56993038-56993057 Msa0364250:CDS 40.0%
TTCTACATTCCAGAAAGGCA+TGG + chr3_1:56993107-56993126 Msa0364250:CDS 40.0%
TTCGTTGGCAATGACTCTAA+GGG + chr3_1:56993176-56993195 Msa0364250:CDS 40.0%
!!! TTTTGGCTTAATGTGGGCTA+GGG + chr3_1:56993345-56993364 Msa0364250:intron 40.0%
CAAATTACTTGCAGGGGATT+TGG + chr3_1:56993423-56993442 Msa0364250:intron 40.0%
GAGTAGAGAGACAGAAAACA+TGG - chr3_1:56993477-56993496 None:intergenic 40.0%
CTGTCTCTCTACTCTATGTA+TGG + chr3_1:56993483-56993502 Msa0364250:intron 40.0%
TATCCTCCTTGGAACAATAG+TGG + chr3_1:56993536-56993555 Msa0364250:intron 40.0%
TCAGATCCACTATTGTTCCA+AGG - chr3_1:56993545-56993564 None:intergenic 40.0%
!! ATAGTGGATCTGAATCCACT+CGG + chr3_1:56993552-56993571 Msa0364250:intron 40.0%
TATTCCACAAGAGTAATGCC+AGG + chr3_1:56993625-56993644 Msa0364250:intron 40.0%
ATTCCACAAGAGTAATGCCA+GGG + chr3_1:56993626-56993645 Msa0364250:intron 40.0%
! GAAATGGGTTCCACTAAAAG+TGG - chr3_1:56993716-56993735 None:intergenic 40.0%
TCAAGGTGGGTATCACATAT+TGG - chr3_1:56993738-56993757 None:intergenic 40.0%
ACATTGAGATACGGAGACAT+TGG - chr3_1:56994079-56994098 None:intergenic 40.0%
ATGTCTCCGTATCTCAATGT+TGG + chr3_1:56994079-56994098 Msa0364250:intron 40.0%
CGGTCCTTTACTTCATGAAA+AGG + chr3_1:56994263-56994282 Msa0364250:CDS 40.0%
TCATGAAAAGGTAGGGAACT+TGG + chr3_1:56994275-56994294 Msa0364250:intron 40.0%
GAACTTGGCTAACTACTTGT+TGG + chr3_1:56994290-56994309 Msa0364250:intron 40.0%
!! TGTTGGTCTTTGTTGTCGAT+AGG + chr3_1:56994307-56994326 Msa0364250:intron 40.0%
! TAGCAAGGTTGATTTCTGAG+CGG + chr3_1:56994432-56994451 Msa0364250:CDS 40.0%
GATTTCTGAGCGGAAATATG+AGG + chr3_1:56994442-56994461 Msa0364250:CDS 40.0%
TGTATCTTGGTTATGCTCTC+AGG + chr3_1:56994505-56994524 Msa0364250:CDS 40.0%
TTTACAGACATGTCTCCTGT+TGG + chr3_1:56994557-56994576 Msa0364250:intron 40.0%
! GGTGTGTTTGGTTCAAACAA+GGG + chr3_1:56994612-56994631 Msa0364250:intron 40.0%
! TGTTTGGTTCAAACAAGGGA+AGG + chr3_1:56994616-56994635 Msa0364250:intron 40.0%
! GTTTGGTTCAAACAAGGGAA+GGG + chr3_1:56994617-56994636 Msa0364250:intron 40.0%
! GGGTTTTTAATGTAGCAGAG+GGG + chr3_1:56994637-56994656 Msa0364250:intron 40.0%
TTTAATGTAGCAGAGGGGTA+AGG + chr3_1:56994642-56994661 Msa0364250:intron 40.0%
CATTGTTATCATGGGATCTG+AGG - chr3_1:56995036-56995055 None:intergenic 40.0%
! CTGATAGACTTGCTCAAAGA+TGG - chr3_1:56995069-56995088 None:intergenic 40.0%
TAGAAGGCAAGTTACGTTGA+TGG - chr3_1:56995100-56995119 None:intergenic 40.0%
AGATCAGATCCAGTGATAGA+AGG - chr3_1:56995116-56995135 None:intergenic 40.0%
TCATTTACATGTCGTCAGCA+TGG - chr3_1:56995174-56995193 None:intergenic 40.0%
GTTGACGCATGTCAAAAGTA+AGG - chr3_1:56995370-56995389 None:intergenic 40.0%
TGACGATTAGGATAAACTGG+AGG + chr3_1:56995394-56995413 Msa0364250:three_prime_UTR 40.0%
TCAAGACAGTCACTTGGAAG+CGG - chr3_1:56986787-56986806 None:intergenic 45.0%
AGGAAGAAGGTGAAGTGATG+CGG - chr3_1:56986822-56986841 None:intergenic 45.0%
TGTGCATATCGAAAGGGGTT+GGG - chr3_1:56987016-56987035 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTT+GGG - chr3_1:56987052-56987071 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+TGG - chr3_1:56987053-56987072 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTA+GGG - chr3_1:56987058-56987077 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+AGG - chr3_1:56987053-56987072 None:intergenic 45.0%
TAAGAGGAGGATGAAGAAGG+TGG - chr3_1:56987122-56987141 None:intergenic 45.0%
TTGTTGAGGTGGTTGAAGAG+GGG - chr3_1:56987288-56987307 None:intergenic 45.0%
GTTGTTGAGGTGGTTGAAGA+GGG - chr3_1:56987289-56987308 None:intergenic 45.0%
ATTGGTTGAGGTTGTTGAGG+TGG - chr3_1:56987299-56987318 None:intergenic 45.0%
CGTTAGGATTTGAAGGAGGT+GGG - chr3_1:56987322-56987341 None:intergenic 45.0%
! GGTTGTTGTTGTTGGATTGG+AGG - chr3_1:56987377-56987396 None:intergenic 45.0%
! GGTGGTTGTTGTTGTTGGAT+TGG - chr3_1:56987380-56987399 None:intergenic 45.0%
TTAACAGCACCAGAGGAGAT+GGG - chr3_1:56987419-56987438 None:intergenic 45.0%
ATTAACAGCACCAGAGGAGA+TGG - chr3_1:56987420-56987439 None:intergenic 45.0%
!! CCGAAAGGAAGGCATTTGAT+TGG + chr3_1:56987503-56987522 Msa0364250:CDS 45.0%
!! GTTGCGCCGATTACGAAATA+TGG + chr3_1:56987587-56987606 Msa0364250:CDS 45.0%
GGTTGAAACAGGGGAATATC+AGG + chr3_1:56987672-56987691 Msa0364250:CDS 45.0%
TGCTGAAGATGTTCATCTCC+TGG + chr3_1:56988650-56988669 Msa0364250:CDS 45.0%
AAGATGTTCATCTCCTGGCT+AGG + chr3_1:56988655-56988674 Msa0364250:CDS 45.0%
TGCTGTTCAAATAGTCGGAG+AGG + chr3_1:56988854-56988873 Msa0364250:CDS 45.0%
TGGAAATGGTGAAGCCTTTG+TGG + chr3_1:56989081-56989100 Msa0364250:CDS 45.0%
CCATCAATGAGCTTGTCAAG+AGG - chr3_1:56989127-56989146 None:intergenic 45.0%
CCTCTTGACAAGCTCATTGA+TGG + chr3_1:56989124-56989143 Msa0364250:CDS 45.0%
TCGATTGGTATCAGCATCAC+AGG + chr3_1:56989213-56989232 Msa0364250:CDS 45.0%
TTGGTATCAGCATCACAGGA+TGG + chr3_1:56989217-56989236 Msa0364250:CDS 45.0%
CTGTGTTCAGACCTCATGAT+GGG + chr3_1:56989857-56989876 Msa0364250:CDS 45.0%
AAAACAGGATGCCCATCATG+AGG - chr3_1:56989871-56989890 None:intergenic 45.0%
ACAATATGATCAGGCTGGTG+TGG - chr3_1:56989916-56989935 None:intergenic 45.0%
!! AATTGCACTACGCTGACTTC+AGG - chr3_1:56990009-56990028 None:intergenic 45.0%
GTATCACGAGAATAGTGGCA+TGG - chr3_1:56990170-56990189 None:intergenic 45.0%
CCTTGAAGGGACCACAAAAT+CGG + chr3_1:56990213-56990232 Msa0364250:intron 45.0%
CTTGAAGGGACCACAAAATC+GGG + chr3_1:56990214-56990233 Msa0364250:intron 45.0%
! AGCTTCACTTCCCGATTTTG+TGG - chr3_1:56990227-56990246 None:intergenic 45.0%
AAAATCGGGAAGTGAAGCTC+TGG + chr3_1:56990228-56990247 Msa0364250:CDS 45.0%
AAATCGGGAAGTGAAGCTCT+GGG + chr3_1:56990229-56990248 Msa0364250:CDS 45.0%
TCTCAGCTAGTGAAGAAGGT+TGG + chr3_1:56990252-56990271 Msa0364250:CDS 45.0%
TTCAGCTAAGCCGTCTCTTA+AGG + chr3_1:56990331-56990350 Msa0364250:CDS 45.0%
AGTAAAAGCAGACCTGCATG+AGG - chr3_1:56990386-56990405 None:intergenic 45.0%
!! ATGCGAGTTGATTCGGGATT+AGG - chr3_1:56990458-56990477 None:intergenic 45.0%
TAATCCCGAATCAACTCGCA+TGG + chr3_1:56990457-56990476 Msa0364250:CDS 45.0%
GGCTATTCAGCAGTATGCTT+TGG + chr3_1:56990589-56990608 Msa0364250:CDS 45.0%
GCCTCCACCATTAGAAAATG+CGG + chr3_1:56990628-56990647 Msa0364250:CDS 45.0%
CCTCCACCATTAGAAAATGC+GGG + chr3_1:56990629-56990648 Msa0364250:CDS 45.0%
! AGTCCCGCATTTTCTAATGG+TGG - chr3_1:56990635-56990654 None:intergenic 45.0%
CGAGATGCAATTACTGCTGA+AGG + chr3_1:56990680-56990699 Msa0364250:CDS 45.0%
AAAGCTTCCTGGACAACCTT+GGG - chr3_1:56990961-56990980 None:intergenic 45.0%
CCTGAAATCAGAAAGCTTCC+TGG - chr3_1:56990972-56990991 None:intergenic 45.0%
CCAGGAAGCTTTCTGATTTC+AGG + chr3_1:56990969-56990988 Msa0364250:CDS 45.0%
GATGGTGTAACCAGATGAGT+TGG - chr3_1:56991184-56991203 None:intergenic 45.0%
! ATTAGTCTCAGAGGAGGAAC+TGG - chr3_1:56991221-56991240 None:intergenic 45.0%
! GACCATATTAGTCTCAGAGG+AGG - chr3_1:56991227-56991246 None:intergenic 45.0%
! GTCGACCATATTAGTCTCAG+AGG - chr3_1:56991230-56991249 None:intergenic 45.0%
! ATCCAGGATGTGGTTGATGT+GGG + chr3_1:56991274-56991293 Msa0364250:CDS 45.0%
TGCCGAAGTAGAAGTGAAAG+TGG + chr3_1:56991300-56991319 Msa0364250:CDS 45.0%
TGAAAGTGGTAGGTGAAGCA+AGG + chr3_1:56991314-56991333 Msa0364250:CDS 45.0%
ATGATGAACTTGGCAAGCAG+GGG + chr3_1:56991347-56991366 Msa0364250:CDS 45.0%
TGGGGAGACTTACATTACAG+AGG + chr3_1:56991468-56991487 Msa0364250:CDS 45.0%
! GTATTAGATGCAGGTGATGG+TGG - chr3_1:56991625-56991644 None:intergenic 45.0%
GGTAAGAACTCTCAACCATC+AGG + chr3_1:56991664-56991683 Msa0364250:CDS 45.0%
AATTGCATGCACTAGGAGAC+GGG - chr3_1:56991699-56991718 None:intergenic 45.0%
GAATTGCATGCACTAGGAGA+CGG - chr3_1:56991700-56991719 None:intergenic 45.0%
TCGGTTGAATTGCATGCACT+AGG - chr3_1:56991706-56991725 None:intergenic 45.0%
TCTTGCATTGCCGCAATTTG+AGG - chr3_1:56991784-56991803 None:intergenic 45.0%
AAAAGAGGGTAGAAGGCTTG+AGG + chr3_1:56992352-56992371 Msa0364250:CDS 45.0%
! CTTTTTCCATGCTTCTCCCT+AGG - chr3_1:56992382-56992401 None:intergenic 45.0%
AGTCCAATGCTGATGCTTTG+TGG + chr3_1:56992408-56992427 Msa0364250:CDS 45.0%
GTCCAATGCTGATGCTTTGT+GGG + chr3_1:56992409-56992428 Msa0364250:CDS 45.0%
GACCGTTTCCAACATGTTAC+AGG + chr3_1:56992476-56992495 Msa0364250:CDS 45.0%
! ACAGTTTTCTCCAATGCTGC+TGG - chr3_1:56992533-56992552 None:intergenic 45.0%
! CAGTTGTCTGAAACTGTGCT+TGG - chr3_1:56992861-56992880 None:intergenic 45.0%
AACTGTCAAACAGGCACTTC+AGG + chr3_1:56992876-56992895 Msa0364250:CDS 45.0%
! GACCACTGTCGTTTCAAAAC+TGG - chr3_1:56993043-56993062 None:intergenic 45.0%
TGCAGGACATCTCAAATGCA+GGG - chr3_1:56993065-56993084 None:intergenic 45.0%
TTGCAGGACATCTCAAATGC+AGG - chr3_1:56993066-56993085 None:intergenic 45.0%
! TTGCTCAAACATGGCTTTGC+AGG - chr3_1:56993082-56993101 None:intergenic 45.0%
AATGTTCAGCCATGCCTTTC+TGG - chr3_1:56993119-56993138 None:intergenic 45.0%
AGAGTCATTGCCAACGAAGT+AGG - chr3_1:56993174-56993193 None:intergenic 45.0%
CTTCGTTGGCAATGACTCTA+AGG + chr3_1:56993175-56993194 Msa0364250:CDS 45.0%
!!! GTTTTGGCTTAATGTGGGCT+AGG + chr3_1:56993344-56993363 Msa0364250:intron 45.0%
GTAACGAAGCTTCTCTGAAC+AGG - chr3_1:56993454-56993473 None:intergenic 45.0%
ACATGGGGATATATCCTCCT+TGG + chr3_1:56993525-56993544 Msa0364250:intron 45.0%
GATCCACTATTGTTCCAAGG+AGG - chr3_1:56993542-56993561 None:intergenic 45.0%
ATGGGTTCCACTAAAAGTGG+TGG - chr3_1:56993713-56993732 None:intergenic 45.0%
AATAGATGGTGAGAAGACCC+TGG - chr3_1:56993879-56993898 None:intergenic 45.0%
!! TTGAGTAGAGAAGTGCTCGA+GGG + chr3_1:56994162-56994181 Msa0364250:CDS 45.0%
GCAACCTCAAGAACAAACTC+TGG + chr3_1:56994207-56994226 Msa0364250:CDS 45.0%
! TGTGCCAGAGTTTGTTCTTG+AGG - chr3_1:56994214-56994233 None:intergenic 45.0%
AACCTTGCTAGCTCCTTTGT+GGG - chr3_1:56994422-56994441 None:intergenic 45.0%
TTCTGAGCGGAAATATGAGG+AGG + chr3_1:56994445-56994464 Msa0364250:CDS 45.0%
! GGGTGTGTTTGGTTCAAACA+AGG + chr3_1:56994611-56994630 Msa0364250:intron 45.0%
!! GCTGTGCAGGTTGATTTACA+TGG + chr3_1:56994876-56994895 Msa0364250:intron 45.0%
AGCACTACACCTTGGCTTAA+GGG - chr3_1:56994924-56994943 None:intergenic 45.0%
AAGCACTACACCTTGGCTTA+AGG - chr3_1:56994925-56994944 None:intergenic 45.0%
!! GAAGTGAAAGCACTACACCT+TGG - chr3_1:56994932-56994951 None:intergenic 45.0%
CGCACGTGCATTGTTATCAT+GGG - chr3_1:56995044-56995063 None:intergenic 45.0%
TCGCACGTGCATTGTTATCA+TGG - chr3_1:56995045-56995064 None:intergenic 45.0%
! CGTAACTTGCCTTCTATCAC+TGG + chr3_1:56995104-56995123 Msa0364250:CDS 45.0%
!! GCGTCAACTTGTTGACGATT+AGG + chr3_1:56995382-56995401 Msa0364250:three_prime_UTR 45.0%
!!! TTTTTTATTTCTTTATATTA+AGG + chr3_1:56992115-56992134 Msa0364250:intron 5.0%
! GGTGAAGTGATGCGGGTTTT+CGG - chr3_1:56986814-56986833 None:intergenic 50.0%
GGAAGAAGGTGAAGTGATGC+GGG - chr3_1:56986821-56986840 None:intergenic 50.0%
ATATCGAAAGGGGTTGGGGA+AGG - chr3_1:56987011-56987030 None:intergenic 50.0%
GTGCATATCGAAAGGGGTTG+GGG - chr3_1:56987015-56987034 None:intergenic 50.0%
GTGTGCATATCGAAAGGGGT+TGG - chr3_1:56987017-56987036 None:intergenic 50.0%
AGGGTTAGGGTTAGGGTTTG+GGG - chr3_1:56987051-56987070 None:intergenic 50.0%
GGGTAAGAGGAGGATGAAGA+AGG - chr3_1:56987125-56987144 None:intergenic 50.0%
GTTGTGAGGGAAAGGGTAAG+AGG - chr3_1:56987138-56987157 None:intergenic 50.0%
!! GGTGATGGTGGTGATCGTAA+GGG - chr3_1:56987172-56987191 None:intergenic 50.0%
!! TGGTGATGGTGGTGATCGTA+AGG - chr3_1:56987173-56987192 None:intergenic 50.0%
TGTTGAGGTGGTTGAAGAGG+GGG - chr3_1:56987287-56987306 None:intergenic 50.0%
GGTTGTTGAGGTGGTTGAAG+AGG - chr3_1:56987290-56987309 None:intergenic 50.0%
!! GGGATTGGTTGAGGTTGTTG+AGG - chr3_1:56987302-56987321 None:intergenic 50.0%
GGATTTGAAGGAGGTGGGAT+TGG - chr3_1:56987317-56987336 None:intergenic 50.0%
GCGTTAGGATTTGAAGGAGG+TGG - chr3_1:56987323-56987342 None:intergenic 50.0%
CCTCCTTCAAATCCTAACGC+CGG + chr3_1:56987323-56987342 Msa0364250:CDS 50.0%
!! CTCCTCTGGTGCTGTTAATC+CGG + chr3_1:56987421-56987440 Msa0364250:CDS 50.0%
GATTAGGCTGCCGAGTAGTA+AGG + chr3_1:56987478-56987497 Msa0364250:CDS 50.0%
CCTTTCGGCACCTTACTACT+CGG - chr3_1:56987491-56987510 None:intergenic 50.0%
!! GTAGTAAGGTGCCGAAAGGA+AGG + chr3_1:56987492-56987511 Msa0364250:CDS 50.0%
! GATGTGGATGTTAGGTTGCC+TGG + chr3_1:56987542-56987561 Msa0364250:CDS 50.0%
TGTCGACCCAAAACCGGATT+AGG - chr3_1:56987620-56987639 None:intergenic 50.0%
GCAATCTGTCGACCCAAAAC+CGG - chr3_1:56987626-56987645 None:intergenic 50.0%
! TTTGCTTAGAGGGCACACTC+AGG + chr3_1:56987724-56987743 Msa0364250:CDS 50.0%
! TTAGAGGGCACACTCAGGTT+TGG + chr3_1:56987729-56987748 Msa0364250:intron 50.0%
TTCTCAGAGGGTCACAGACT+TGG + chr3_1:56988620-56988639 Msa0364250:intron 50.0%
GCAACAGAAACTACCTAGCC+AGG - chr3_1:56988671-56988690 None:intergenic 50.0%
TGGCAGTGCCAGCAAATTTG+AGG - chr3_1:56988894-56988913 None:intergenic 50.0%
TGGAGGATCTTCTGCCACAA+AGG - chr3_1:56989098-56989117 None:intergenic 50.0%
! TGTAGGAACACATGATGGGG+AGG + chr3_1:56989156-56989175 Msa0364250:CDS 50.0%
ATCAGCATCACAGGATGGCA+CGG + chr3_1:56989222-56989241 Msa0364250:CDS 50.0%
TGAGGTCTGAACACAGCAAG+TGG - chr3_1:56989853-56989872 None:intergenic 50.0%
GCTGTGTTCAGACCTCATGA+TGG + chr3_1:56989856-56989875 Msa0364250:CDS 50.0%
! CCGATTTTGTGGTCCCTTCA+AGG - chr3_1:56990216-56990235 None:intergenic 50.0%
TGGGTCTCAGCTAGTGAAGA+AGG + chr3_1:56990248-56990267 Msa0364250:CDS 50.0%
GGGCATGGTCACAGTAAACT+CGG - chr3_1:56990492-56990511 None:intergenic 50.0%
! CCCGCATTTTCTAATGGTGG+AGG - chr3_1:56990632-56990651 None:intergenic 50.0%
ACCTGCAGACGAGTCTAAAG+AGG - chr3_1:56990711-56990730 None:intergenic 50.0%
! CAAGCAAGTAGCACTGAGAG+TGG + chr3_1:56990779-56990798 Msa0364250:CDS 50.0%
GAAAGCTTCCTGGACAACCT+TGG - chr3_1:56990962-56990981 None:intergenic 50.0%
TATGGTCGACAGAGTGAGTG+AGG + chr3_1:56991240-56991259 Msa0364250:CDS 50.0%
! GATCCAGGATGTGGTTGATG+TGG + chr3_1:56991273-56991292 Msa0364250:CDS 50.0%
TACCCACATCAACCACATCC+TGG - chr3_1:56991279-56991298 None:intergenic 50.0%
TGCTCTCAGGCTTCTGATCT+TGG + chr3_1:56991412-56991431 Msa0364250:CDS 50.0%
GTCTTGAAGTCCATCCTCAC+CGG - chr3_1:56991548-56991567 None:intergenic 50.0%
ATTGCATGCACTAGGAGACG+GGG - chr3_1:56991698-56991717 None:intergenic 50.0%
! AGCCCACAAAGCATCAGCAT+TGG - chr3_1:56992414-56992433 None:intergenic 50.0%
CAAGGATCTACCAGCAGCAT+TGG + chr3_1:56992520-56992539 Msa0364250:CDS 50.0%
TACTATCGCGGAATCCTTCC+AGG + chr3_1:56992628-56992647 Msa0364250:CDS 50.0%
AGCTCGAAGCTACTGTAGCT+AGG + chr3_1:56992830-56992849 Msa0364250:CDS 50.0%
TGCAGCAACGCCTTGAATCT+GGG + chr3_1:56993148-56993167 Msa0364250:CDS 50.0%
ACGAAGTAGGCCCAGATTCA+AGG - chr3_1:56993161-56993180 None:intergenic 50.0%
TGAATCTGGGCCTACTTCGT+TGG + chr3_1:56993161-56993180 Msa0364250:CDS 50.0%
ACGAAGCTTCTCTGAACAGG+AGG - chr3_1:56993451-56993470 None:intergenic 50.0%
TGTCCCTGGCATTACTCTTG+TGG - chr3_1:56993632-56993651 None:intergenic 50.0%
!! GGTGTTGAAAAGAGTGTCCC+TGG - chr3_1:56993646-56993665 None:intergenic 50.0%
TGGCACACTCAACAAAAGGC+GGG - chr3_1:56993859-56993878 None:intergenic 50.0%
CTGGCACACTCAACAAAAGG+CGG - chr3_1:56993860-56993879 None:intergenic 50.0%
! GCCTTTTGTTGAGTGTGCCA+GGG + chr3_1:56993859-56993878 Msa0364250:intron 50.0%
ACCCTGGCACACTCAACAAA+AGG - chr3_1:56993863-56993882 None:intergenic 50.0%
CTCGAGCACTTCTCTACTCA+AGG - chr3_1:56994163-56994182 None:intergenic 50.0%
!! CTTGAGTAGAGAAGTGCTCG+AGG + chr3_1:56994161-56994180 Msa0364250:CDS 50.0%
CGAGGGTCAGAGAAAGCTAA+TGG + chr3_1:56994179-56994198 Msa0364250:CDS 50.0%
GTAAAGGACCGTTGTTCAGC+TGG - chr3_1:56994254-56994273 None:intergenic 50.0%
AGCACCACTAGATCCCACAA+AGG + chr3_1:56994406-56994425 Msa0364250:CDS 50.0%
AGCTCCTTTGTGGGATCTAG+TGG - chr3_1:56994413-56994432 None:intergenic 50.0%
ATCCCACAAAGGAGCTAGCA+AGG + chr3_1:56994417-56994436 Msa0364250:CDS 50.0%
CAACCTTGCTAGCTCCTTTG+TGG - chr3_1:56994423-56994442 None:intergenic 50.0%
!! CTGATTGGCTTGGGTGTGTT+TGG + chr3_1:56994600-56994619 Msa0364250:intron 50.0%
TCACTTCACTTCTGCTGTGC+AGG + chr3_1:56994863-56994882 Msa0364250:intron 50.0%
GTTCCTCTTCCCTTAAGCCA+AGG + chr3_1:56994912-56994931 Msa0364250:CDS 50.0%
ACACCTTGGCTTAAGGGAAG+AGG - chr3_1:56994918-56994937 None:intergenic 50.0%
TGTCATCCACGAGAGCTTTC+GGG - chr3_1:56994991-56995010 None:intergenic 50.0%
CTGTCATCCACGAGAGCTTT+CGG - chr3_1:56994992-56995011 None:intergenic 50.0%
! GGGGAAGGTGGTGGTTGATT+GGG - chr3_1:56986996-56987015 None:intergenic 55.0%
! TGGGGAAGGTGGTGGTTGAT+TGG - chr3_1:56986997-56987016 None:intergenic 55.0%
GGGTTAGGGTTAGGGTTTGG+GGG - chr3_1:56987050-56987069 None:intergenic 55.0%
! GAGGATGAAGAAGGTGGTGG+CGG - chr3_1:56987116-56987135 None:intergenic 55.0%
GAGGAGGATGAAGAAGGTGG+TGG - chr3_1:56987119-56987138 None:intergenic 55.0%
GTGAGGGAAAGGGTAAGAGG+AGG - chr3_1:56987135-56987154 None:intergenic 55.0%
!! GAAGCTGAAGCTGGTGATGG+TGG - chr3_1:56987184-56987203 None:intergenic 55.0%
GCTGAAGCTGAAGCTGGTGA+TGG - chr3_1:56987187-56987206 None:intergenic 55.0%
GCTGATGCTGAAGCTGAAGC+TGG - chr3_1:56987193-56987212 None:intergenic 55.0%
! GTGGTTGAAGAGGGGGTGTA+GGG - chr3_1:56987280-56987299 None:intergenic 55.0%
!! GAAGGAGGTGGGATTGGTTG+AGG - chr3_1:56987311-56987330 None:intergenic 55.0%
CCGGCGTTAGGATTTGAAGG+AGG - chr3_1:56987326-56987345 None:intergenic 55.0%
! GCACCGGCGTTAGGATTTGA+AGG - chr3_1:56987329-56987348 None:intergenic 55.0%
TGCTGAGGAGAGCCATGAGA+CGG - chr3_1:56987352-56987371 None:intergenic 55.0%
! GCGGTGGTGGTTGTTGTTGT+TGG - chr3_1:56987385-56987404 None:intergenic 55.0%
!! GAGATGGGCTGTGATTGTGG+CGG - chr3_1:56987404-56987423 None:intergenic 55.0%
!! GAGGAGATGGGCTGTGATTG+TGG - chr3_1:56987407-56987426 None:intergenic 55.0%
CAATCACAGCCCATCTCCTC+TGG + chr3_1:56987407-56987426 Msa0364250:CDS 55.0%
! GCATTGGCAGCAGTTATCGC+CGG - chr3_1:56987443-56987462 None:intergenic 55.0%
!! CCGAGTAGTAAGGTGCCGAA+AGG + chr3_1:56987488-56987507 Msa0364250:CDS 55.0%
TGAAGTGCAGCCTCAGCTTG+AGG + chr3_1:56987565-56987584 Msa0364250:CDS 55.0%
CAGATGGCCGTGTCTTTGTG+TGG + chr3_1:56988772-56988791 Msa0364250:CDS 55.0%
GTTGCAGCATTGCCTCATGC+AGG + chr3_1:56990371-56990390 Msa0364250:CDS 55.0%
GCCTCTTTAGACTCGTCTGC+AGG + chr3_1:56990707-56990726 Msa0364250:CDS 55.0%
CTCAAAGGAGGAGGTGGAGA+AGG - chr3_1:56990938-56990957 None:intergenic 55.0%
AACCTTGGGCTCAAAGGAGG+AGG - chr3_1:56990947-56990966 None:intergenic 55.0%
GACAACCTTGGGCTCAAAGG+AGG - chr3_1:56990950-56990969 None:intergenic 55.0%
CTGGACAACCTTGGGCTCAA+AGG - chr3_1:56990953-56990972 None:intergenic 55.0%
CTTTGAGCCCAAGGTTGTCC+AGG + chr3_1:56990951-56990970 Msa0364250:CDS 55.0%
ATTGAGATGGCCCGAGAGTG+TGG + chr3_1:56991436-56991455 Msa0364250:CDS 55.0%
ACCTATCGCACCACACTCTC+GGG - chr3_1:56991449-56991468 None:intergenic 55.0%
CACCTATCGCACCACACTCT+CGG - chr3_1:56991450-56991469 None:intergenic 55.0%
! GAGAGTGTGGTGCGATAGGT+GGG + chr3_1:56991449-56991468 Msa0364250:CDS 55.0%
AGAGTGTGGTGCGATAGGTG+GGG + chr3_1:56991450-56991469 Msa0364250:CDS 55.0%
! CTCACCGGCATTGGAAGGTT+GGG - chr3_1:56991533-56991552 None:intergenic 55.0%
AAGTCCATCCTCACCGGCAT+TGG - chr3_1:56991542-56991561 None:intergenic 55.0%
TTCCATGCTTCTCCCTAGGG+CGG - chr3_1:56992378-56992397 None:intergenic 55.0%
ATAGAGAGGAGTGGGCGACA+AGG + chr3_1:56992774-56992793 Msa0364250:intron 55.0%
GTGCAGCAACGCCTTGAATC+TGG + chr3_1:56993147-56993166 Msa0364250:CDS 55.0%
! CGCCTTTTGTTGAGTGTGCC+AGG + chr3_1:56993858-56993877 Msa0364250:intron 55.0%
CTGCCCATCCAGCTGAACAA+CGG + chr3_1:56994243-56994262 Msa0364250:CDS 55.0%
GGACCGTTGTTCAGCTGGAT+GGG - chr3_1:56994249-56994268 None:intergenic 55.0%
AGGACCGTTGTTCAGCTGGA+TGG - chr3_1:56994250-56994269 None:intergenic 55.0%
GCTTTCACTTCTGCAGCAGC+TGG + chr3_1:56994941-56994960 Msa0364250:CDS 55.0%
ACATGTCCCGAAAGCTCTCG+TGG + chr3_1:56994982-56995001 Msa0364250:CDS 55.0%
AAAGGGGTTGGGGAAGGTGG+TGG - chr3_1:56987005-56987024 None:intergenic 60.0%
TCGAAAGGGGTTGGGGAAGG+TGG - chr3_1:56987008-56987027 None:intergenic 60.0%
!! GAAGAAGGTGGTGGCGGTGA+AGG - chr3_1:56987110-56987129 None:intergenic 60.0%
! GGTGGTTGAAGAGGGGGTGT+AGG - chr3_1:56987281-56987300 None:intergenic 60.0%
GCTGAGGAGAGCCATGAGAC+GGG - chr3_1:56987351-56987370 None:intergenic 60.0%
!! GTTGGATTGGAGGGGTGCTG+AGG - chr3_1:56987367-56987386 None:intergenic 60.0%
! ATGGGCTGTGATTGTGGCGG+TGG - chr3_1:56987401-56987420 None:intergenic 60.0%
CGCCGGATTAACAGCACCAG+AGG - chr3_1:56987426-56987445 None:intergenic 60.0%
AACTGCTGCCAATGCTGCCG+CGG + chr3_1:56987448-56987467 Msa0364250:CDS 60.0%
CAGCCTAATCAACGCTGCCG+CGG - chr3_1:56987468-56987487 None:intergenic 60.0%
AGCTGAGGCTGCACTTCACC+AGG - chr3_1:56987563-56987582 None:intergenic 60.0%
ATCGGCGCAACCTCAAGCTG+AGG - chr3_1:56987578-56987597 None:intergenic 60.0%
CTTGGGCTCAAAGGAGGAGG+TGG - chr3_1:56990944-56990963 None:intergenic 60.0%
CACCTCCTCCTTTGAGCCCA+AGG + chr3_1:56990942-56990961 Msa0364250:CDS 60.0%
! CGAGAGTGTGGTGCGATAGG+TGG + chr3_1:56991448-56991467 Msa0364250:CDS 60.0%
TTCTACTGGAGGGGACTCGC+TGG + chr3_1:56991507-56991526 Msa0364250:CDS 60.0%
CTGGCCCAACCTTCCAATGC+CGG + chr3_1:56991526-56991545 Msa0364250:CDS 60.0%
! CCTCACCGGCATTGGAAGGT+TGG - chr3_1:56991534-56991553 None:intergenic 60.0%
CCAACCTTCCAATGCCGGTG+AGG + chr3_1:56991531-56991550 Msa0364250:CDS 60.0%
! CCATCCTCACCGGCATTGGA+AGG - chr3_1:56991538-56991557 None:intergenic 60.0%
CCTTCCAATGCCGGTGAGGA+TGG + chr3_1:56991535-56991554 Msa0364250:CDS 60.0%
GCACTAGGAGACGGGGAAGA+CGG - chr3_1:56991691-56991710 None:intergenic 60.0%
GCTCTCGTGGATGACAGACG+TGG + chr3_1:56994995-56995014 Msa0364250:CDS 60.0%
GCGGTGAAGGAGCGGAGGAA+GGG - chr3_1:56987097-56987116 None:intergenic 65.0%
!! AGGTGGTGGCGGTGAAGGAG+CGG - chr3_1:56987105-56987124 None:intergenic 65.0%
!! ATGAGACGGGCACCGGCGTT+AGG - chr3_1:56987338-56987357 None:intergenic 65.0%
TAACGCCGGTGCCCGTCTCA+TGG + chr3_1:56987337-56987356 Msa0364250:CDS 65.0%
GAGAGCCATGAGACGGGCAC+CGG - chr3_1:56987345-56987364 None:intergenic 65.0%
GGCTGTGATTGTGGCGGTGG+TGG - chr3_1:56987398-56987417 None:intergenic 65.0%
!! CTGCCGCGGCAGCGTTGATT+AGG + chr3_1:56987462-56987481 Msa0364250:CDS 65.0%
! GCCCGAGAGTGTGGTGCGAT+AGG + chr3_1:56991445-56991464 Msa0364250:CDS 65.0%
GACGGGGAAGACGGACCTGA+TGG - chr3_1:56991682-56991701 None:intergenic 65.0%
AGAAGGCTTGAGGCCGCCCT+AGG + chr3_1:56992362-56992381 Msa0364250:CDS 65.0%
GAAGGCTTGAGGCCGCCCTA+GGG + chr3_1:56992363-56992382 Msa0364250:CDS 65.0%
GAGAGGAGTGGGCGACAAGG+CGG + chr3_1:56992777-56992796 Msa0364250:intron 65.0%
GGCGGTGAAGGAGCGGAGGA+AGG - chr3_1:56987098-56987117 None:intergenic 70.0%
!! TGGTGGCGGTGAAGGAGCGG+AGG - chr3_1:56987102-56987121 None:intergenic 70.0%
CAACGCTGCCGCGGCAGCAT+TGG - chr3_1:56987459-56987478 None:intergenic 70.0%
GGCCGCCCTAGGGAGAAGCA+TGG + chr3_1:56992373-56992392 Msa0364250:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 56986759 56995467 56986759 ID=Msa0364250;Name=Msa0364250
chr3_1 mRNA 56986759 56995467 56986759 ID=Msa0364250-mRNA-1;Parent=Msa0364250;Name=Msa0364250-mRNA-1;_AED=0.05;_eAED=0.05;_QI=225|1|1|1|1|1|12|274|1385
chr3_1 exon 56986759 56987745 56986759 ID=Msa0364250-mRNA-1:exon:10697;Parent=Msa0364250-mRNA-1
chr3_1 exon 56988627 56988676 56988627 ID=Msa0364250-mRNA-1:exon:10698;Parent=Msa0364250-mRNA-1
chr3_1 exon 56988764 56988920 56988764 ID=Msa0364250-mRNA-1:exon:10699;Parent=Msa0364250-mRNA-1
chr3_1 exon 56989025 56989243 56989025 ID=Msa0364250-mRNA-1:exon:10700;Parent=Msa0364250-mRNA-1
chr3_1 exon 56989820 56989948 56989820 ID=Msa0364250-mRNA-1:exon:10701;Parent=Msa0364250-mRNA-1
chr3_1 exon 56990221 56991816 56990221 ID=Msa0364250-mRNA-1:exon:10702;Parent=Msa0364250-mRNA-1
chr3_1 exon 56992290 56992649 56992290 ID=Msa0364250-mRNA-1:exon:10703;Parent=Msa0364250-mRNA-1
chr3_1 exon 56992778 56992897 56992778 ID=Msa0364250-mRNA-1:exon:10704;Parent=Msa0364250-mRNA-1
chr3_1 exon 56993027 56993197 56993027 ID=Msa0364250-mRNA-1:exon:10705;Parent=Msa0364250-mRNA-1
chr3_1 exon 56994126 56994284 56994126 ID=Msa0364250-mRNA-1:exon:10706;Parent=Msa0364250-mRNA-1
chr3_1 exon 56994401 56994526 56994401 ID=Msa0364250-mRNA-1:exon:10707;Parent=Msa0364250-mRNA-1
chr3_1 exon 56994885 56995467 56994885 ID=Msa0364250-mRNA-1:exon:10708;Parent=Msa0364250-mRNA-1
chr3_1 five_prime_UTR 56986759 56986983 56986759 ID=Msa0364250-mRNA-1:five_prime_utr;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56986984 56987745 56986984 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56988627 56988676 56988627 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56988764 56988920 56988764 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56989025 56989243 56989025 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56989820 56989948 56989820 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56990221 56991816 56990221 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56992290 56992649 56992290 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56992778 56992897 56992778 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56993027 56993197 56993027 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56994126 56994284 56994126 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56994401 56994526 56994401 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 CDS 56994885 56995193 56994885 ID=Msa0364250-mRNA-1:cds;Parent=Msa0364250-mRNA-1
chr3_1 three_prime_UTR 56995194 56995467 56995194 ID=Msa0364250-mRNA-1:three_prime_utr;Parent=Msa0364250-mRNA-1
Gene Sequence

>Msa0364250

ATGTCTTCTCCCAATCAACCACCACCTTCCCCAACCCCTTTCGATATGCACACTTTCTTCAATCCCCCAAACCCTAACCCTAACCCTAACCCTAACATTTCTTCTCAATTCCCTTCCTCCGCTCCTTCACCGCCACCACCTTCTTCATCCTCCTCTTACCCTTTCCCTCACAACAACAATAACTACCCTTACGATCACCACCATCACCAGCTTCAGCTTCAGCATCAGCATCAACAACAGCACCATCAACAAAACCAGACCAATTTTCCAATTCAACACCGTTCAATTTCATTCCCTACACCCCCTCTTCAACCACCTCAACAACCTCAACCAATCCCACCTCCTTCAAATCCTAACGCCGGTGCCCGTCTCATGGCTCTCCTCAGCACCCCTCCAATCCAACAACAACAACCACCACCGCCACAATCACAGCCCATCTCCTCTGGTGCTGTTAATCCGGCGATAACTGCTGCCAATGCTGCCGCGGCAGCGTTGATTAGGCTGCCGAGTAGTAAGGTGCCGAAAGGAAGGCATTTGATTGGTGATCATGTTGTGTATGATGTGGATGTTAGGTTGCCTGGTGAAGTGCAGCCTCAGCTTGAGGTTGCGCCGATTACGAAATATGGATCAGATCCTAATCCGGTTTTGGGTCGACAGATTGCTGTGAATAAGTCTTATATTTGTTATGGGTTGAAACAGGGGAATATCAGGGTGCTTAATATTCATACTGCTGTTAGATCTTTGCTTAGAGGGCACACTCAGAGGGTCACAGACTTGGCATTCTTTGCTGAAGATGTTCATCTCCTGGCTAGTGTTGGCACAGATGGCCGTGTCTTTGTGTGGAAAATTTCTGAAGGTCCGGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTGTTCAAATAGTCGGAGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGCCACAAACAAGAAATTTTGATAGTTGGTATGGGAAAAAATGTTCTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCCTTTGTGGCAGAAGATCCTCCAAAATGTCCTCTTGACAAGCTCATTGATGGGGTTCAACTTGTAGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAATCGATTGGTATCAGCATCACAGGATGGCACGATAAAGATATGGGAAGATCGGAAGACACAGCCACTTGCTGTGTTCAGACCTCATGATGGGCATCCTGTTTTTTCTGCTACATTTTTTACTGCTCCACACCAGCCTGATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAGCTCTGGGTCTCAGCTAGTGAAGAAGGTTGGCTGCTCCCAAGCAATACTGAAACATGGAAATGCACTCAGACTTTGGAGTTGAAGAGTTCAGCTAAGCCGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCACTTGGAATATGGTCCTAATCCCGAATCAACTCGCATGGATTATATGTCCGAGTTTACTGTGACCATGCCCATTCTTAGTTTTACTGGAACAAGTGATATTTTGCCTCATGGGGAACATATTGTTCAGGTTTATTGTGTTCAGACACTGGCTATTCAGCAGTATGCTTTGGATTTGGCACAATGCTTGCCTCCACCATTAGAAAATGCGGGACTAGATAAGTCTGATTCCAGTGTTTCACGAGATGCAATTACTGCTGAAGGATTTGCCTCTTTAGACTCGTCTGCAGGTAGAACATCTGAGATGTCTTTACCCAGTTCTACTCCCAAAACAATGATGCAAGCAAGTAGCACTGAGAGTGGTCTCGTGTCAAGATACCCTTTAAGCTCAGGTCATACTGAAGCACCTATTTCTAGACAAATCAGCAGTTCAAATATTGAAGCTAAAACTGTTACACTGGCTCCTTCTAGTAGTGATGCTGATATTGTTTGTGTTCCTTCTCCACCTCCTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGAGTGATCATGTTGGGGACCAAGCTGTTAATGATTATTCTGTTGACAGACAAATGGATACAATTCACAGGAACTTGTCCGACCAATTTAATAGCGATACAAAGAATGATGACAATAAAAACAAACAGGATGACATTTCTACTGTACTTAACCCTTCTGTCATTTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATTACAAAAGCCAGTTCCTCCTCTGAGACTAATATGGTCGACAGAGTGAGTGAGGTAGAAACAAAGATCCAGGATGTGGTTGATGTGGGTAATGCCGAAGTAGAAGTGAAAGTGGTAGGTGAAGCAAGGCCTAATCAAAATGATGAACTTGGCAAGCAGGGGCCACAACAAAACCCAGTTTCTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCATTGAGATGGCCCGAGAGTGTGGTGCGATAGGTGGGGAGACTTACATTACAGAGGAACCTGGAAAAGTTGATTCTACTGGAGGGGACTCGCTGGCCCAACCTTCCAATGCCGGTGAGGATGGACTTCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCCGACTCATCTACATCAATGGTAGTACCACCATCACCTGCATCTAATACAAAAGGGAAGAGACAAAAGGGTAAGAACTCTCAACCATCAGGTCCGTCTTCCCCGTCTCCTAGTGCATGCAATTCAACCGATTCGTCCAATGAACCAAATGGAATTTCAAACCTCCCATGTACTGAAAATAGCAATCCTCAAATTGCGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGACGGTAACAGTTCCAGTTACAAAAGAGGGTAGAAGGCTTGAGGCCGCCCTAGGGAGAAGCATGGAAAAAGCTGTTAAGTCCAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAAAATGCAAAAAATGAGAAGTTGTTGCGAGACCGTTTCCAACATGTTACAGGTTTGATTACCAACTTCATGAACAAGGATCTACCAGCAGCATTGGAGAAAACTGTAAAGAAGGAAATGACTTCAGTTGCACAAGCTTTAGTTCGTTCAATGTCTCCTGCTATTGAGAAAACATTATCATCTACTATCGCGGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCGGTGAATCAACTTGATAAATCAGTTAATTTAAAGCTCGAAGCTACTGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGTCAAACAGGCACTTCAGGATGCACTTAAATCCAGTTTTGAAACGACAGTGGTCCCTGCATTTGAGATGTCCTGCAAAGCCATGTTTGAGCAAGTTGATTCTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAGCAACGCCTTGAATCTGGGCCTACTTCGTTGGCAATGACTCTAAGGGATTCCATTAATTCAGCATCATCAGTTACTCAAACCTTGAGTAGAGAAGTGCTCGAGGGTCAGAGAAAGCTAATGGCACTTGCAACCTCAAGAACAAACTCTGGCACATTGAATACTCTGCCCATCCAGCTGAACAACGGTCCTTTACTTCATGAAAAGGTTGAAGCACCACTAGATCCCACAAAGGAGCTAGCAAGGTTGATTTCTGAGCGGAAATATGAGGAGGCATTTATTGCAGCACTACACAGAAGTGATGTATCTATTGTATCTTGGTTATGCTCTCAGGTTGATTTACATGGACTTTTGACATTGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCACTTCTGCAGCAGCTGGCATGTGATATCAACAATGACATGTCCCGAAAGCTCTCGTGGATGACAGACGTGGCTACTGCTATTAATCCCTCAGATCCCATGATAACAATGCACGTGCGACCCATCTTTGAGCAAGTCTATCAGATACTGAACCATCAACGTAACTTGCCTTCTATCACTGGATCTGATCTTTCAAGTACCCGTCTTTTATTGCATGTCATCAACTCCATGCTGACGACATGTAAATGA
Protein sequence

>Msa0364250

MSSPNQPPPSPTPFDMHTFFNPPNPNPNPNPNISSQFPSSAPSPPPPSSSSSYPFPHNNNNYPYDHHHHQLQLQHQHQQQHHQQNQTNFPIQHRSISFPTPPLQPPQQPQPIPPPSNPNAGARLMALLSTPPIQQQQPPPPQSQPISSGAVNPAITAANAAAAALIRLPSSKVPKGRHLIGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAVQIVGEEKVEHPQICWHCHKQEILIVGMGKNVLRIDTTKVGNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLAVFRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSNTETWKCTQTLELKSSAKPSLKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYMSEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENAGLDKSDSSVSRDAITAEGFASLDSSAGRTSEMSLPSSTPKTMMQASSTESGLVSRYPLSSGHTEAPISRQISSSNIEAKTVTLAPSSSDADIVCVPSPPPPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVDRQMDTIHRNLSDQFNSDTKNDDNKNKQDDISTVLNPSVIFKQPTHLVTPSEITKASSSSETNMVDRVSEVETKIQDVVDVGNAEVEVKVVGEARPNQNDELGKQGPQQNPVSDGKEKFFCSQASDLGIEMARECGAIGGETYITEEPGKVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSDSSTSMVVPPSPASNTKGKRQKGKNSQPSGPSSPSPSACNSTDSSNEPNGISNLPCTENSNPQIAAMQDSLNQLLTMQKEMQKQMTMTVTVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRFQHVTGLITNFMNKDLPAALEKTVKKEMTSVAQALVRSMSPAIEKTLSSTIAESFQRGVGDKAVNQLDKSVNLKLEATVARQIQAQFQTTVKQALQDALKSSFETTVVPAFEMSCKAMFEQVDSTFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMALATSRTNSGTLNTLPIQLNNGPLLHEKVEAPLDPTKELARLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHGLLTLVPLPLSQGVVLSLLQQLACDINNDMSRKLSWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRNLPSITGSDLSSTRLLLHVINSMLTTCK*