AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0456080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0456080 MtrunA17_Chr3g0103121 98.124 1386 23 2 1 1386 1 1383 0.0 2793
Msa0456080 MtrunA17_Chr2g0290921 53.571 1372 540 24 52 1386 67 1378 0.0 1303
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0456080 AT3G13300.2 58.308 1312 478 20 93 1386 49 1309 0.0 1429
Msa0456080 AT3G13300.1 58.308 1312 478 20 93 1386 84 1344 0.0 1429
Msa0456080 AT3G13290.1 55.099 1412 533 30 2 1386 3 1340 0.0 1411
Msa0456080 AT3G13300.3 56.048 1174 450 19 93 1248 84 1209 0.0 1203

Find 408 sgRNAs with CRISPR-Local

Find 684 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGAAGCTTTCTGATTTC+AGG 0.111544 3_3:+49364736 Msa0456080:CDS
AATGTTCAGCCATGCCTTTC+TGG 0.114471 3_3:-49366883 None:intergenic
TAGGGTTAGGGTTAGGGTTT+GGG 0.192627 3_3:-49360814 None:intergenic
TGCTCTCAGGCTTCTGATCT+TGG 0.193404 3_3:+49365179 Msa0456080:CDS
ACTTGCTTGCATCATTGTTT+TGG 0.210534 3_3:-49364532 None:intergenic
ATCGGATCCTAATCCGGTTT+TGG 0.234731 3_3:+49361378 Msa0456080:CDS
AACTGATGATGCTGAATTAA+TGG 0.236650 3_3:-49367894 None:intergenic
GTGCAGCAACGCCTTGAATC+TGG 0.237439 3_3:+49366914 Msa0456080:CDS
AATCAATCTGTGATTAGATT+TGG 0.239107 3_3:-49360683 None:intergenic
TTGCTCAAACATGGCTTTGC+AGG 0.239587 3_3:-49366846 None:intergenic
AGCTTGTCAAGAGGACATTT+TGG 0.240443 3_3:-49362882 None:intergenic
ATCAATCTGTGATTAGATTT+GGG 0.257493 3_3:-49360682 None:intergenic
AATAAGTCTTATATTTGTTA+TGG 0.259437 3_3:+49361418 Msa0456080:CDS
ATGCGAGTTGATTCGGGATT+AGG 0.274855 3_3:-49364222 None:intergenic
CTCAATTTAGACACTGTATC+TGG 0.281616 3_3:+49369062 Msa0456080:three_prime_UTR
TAGGGTTAGGGTTAGGGTTA+GGG 0.283522 3_3:-49360820 None:intergenic
TCTTTGTATCGCTATTAAAT+TGG 0.284531 3_3:-49364857 None:intergenic
TTAGGGTTAGGGTTAGGGTT+AGG 0.284570 3_3:-49360821 None:intergenic
CTTCGTTGGCAATGACTCTA+AGG 0.288649 3_3:+49366942 Msa0456080:CDS
TTAACAACGGTTGCAACTAT+TGG 0.288908 3_3:+49369157 Msa0456080:three_prime_UTR
GAAATGTTAGGGTTAGGGTT+AGG 0.294032 3_3:-49360827 None:intergenic
TCAGTATGACCTGAGCTTAA+AGG 0.295799 3_3:-49364585 None:intergenic
AAGGAGCGGAGGAAGGGAAT+TGG 0.295926 3_3:-49360853 None:intergenic
GGTTGAAACAGGGGAATATC+AGG 0.299864 3_3:+49361440 Msa0456080:CDS
GACCGTTTCCAACATGTTAC+AGG 0.301042 3_3:+49366243 Msa0456080:CDS
TACTATCGCGGAATCCTTCC+AGG 0.304972 3_3:+49366395 Msa0456080:CDS
TATTTGTTATGGGTTGAAAC+AGG 0.311245 3_3:+49361429 Msa0456080:CDS
TGGGAAGAAATGTTAGGGTT+AGG 0.314580 3_3:-49360833 None:intergenic
TTGAACAGCAATAACAATAT+TGG 0.317646 3_3:-49362608 None:intergenic
CTGTCATCCACGAGAGCTTT+CGG 0.320363 3_3:-49368713 None:intergenic
GACCACTGTCGTTTCAAAAC+TGG 0.320503 3_3:-49366807 None:intergenic
TTAGGGTTAGGGTTAGGGTT+TGG 0.320971 3_3:-49360815 None:intergenic
GTTGCGCCGATTACGAAATA+TGG 0.323077 3_3:+49361355 Msa0456080:CDS
TGAAATTCCATTTGGTTCAT+TGG 0.334502 3_3:-49365498 None:intergenic
CCTGAAATCAGAAAGCTTCC+TGG 0.334833 3_3:-49364736 None:intergenic
TCAGCAGTATGCTTTGGATT+TGG 0.339251 3_3:+49364362 Msa0456080:CDS
GGCTATTCAGCAGTATGCTT+TGG 0.339687 3_3:+49364356 Msa0456080:CDS
TGTCATCCACGAGAGCTTTC+GGG 0.341908 3_3:-49368712 None:intergenic
GAAATTGAACGGTGTTGAAT+TGG 0.344229 3_3:-49361016 None:intergenic
ATTGATGGGGTTCAACTTGT+AGG 0.344290 3_3:+49362906 Msa0456080:CDS
ATAATCCATGCGAGTTGATT+CGG 0.346072 3_3:-49364229 None:intergenic
TGGAGAAGGTGGTGGTTGAT+TGG 0.346338 3_3:-49360759 None:intergenic
AGGGTTAGGGTTAGGGTTTG+GGG 0.347828 3_3:-49360813 None:intergenic
TGTCGACCCAAAACCGGATT+AGG 0.349912 3_3:-49361385 None:intergenic
GTACAAAGTTGTGAGTTTCA+TGG 0.351634 3_3:+49368977 Msa0456080:three_prime_UTR
GGAGAAGGTGGTGGTTGATT+GGG 0.353739 3_3:-49360758 None:intergenic
AAATGTTAGGGTTAGGGTTA+GGG 0.355061 3_3:-49360826 None:intergenic
GTGGTGGTTGTTGTTGTTGT+TGG 0.355853 3_3:-49361147 None:intergenic
GGTGAAGTGATGCGGGATTT+CGG 0.357718 3_3:-49360570 None:intergenic
CTGCCGCGGCAGCGTTGATT+AGG 0.358098 3_3:+49361230 Msa0456080:CDS
TGTATCTTGGTTATGCTCTC+AGG 0.367034 3_3:+49368269 Msa0456080:CDS
ATAAGTCTTATATTTGTTAT+GGG 0.368854 3_3:+49361419 Msa0456080:CDS
GCGTCAACTTGTTGACGATT+AGG 0.370461 3_3:+49369106 Msa0456080:three_prime_UTR
AGGAGCGGAGGAAGGGAATT+GGG 0.371262 3_3:-49360852 None:intergenic
TTGAACTCTTCTGATACAAT+TGG 0.371554 3_3:+49368948 Msa0456080:three_prime_UTR
TTCCATGTTTCAGTATTGCT+TGG 0.376457 3_3:-49364048 None:intergenic
CACCTATCGCACCACACTCT+CGG 0.378749 3_3:-49365214 None:intergenic
TCATGGGGAACATATTGTTC+AGG 0.379850 3_3:+49364314 Msa0456080:CDS
CAACGCTGCCGCGGCAGCAT+TGG 0.385687 3_3:-49361224 None:intergenic
CCTCTTGACAAGCTCATTGA+TGG 0.386557 3_3:+49362891 Msa0456080:CDS
GTTGTTGAGGTGGTTGTAGA+GGG 0.386587 3_3:-49361051 None:intergenic
GGGAAGAAATGTTAGGGTTA+GGG 0.388457 3_3:-49360832 None:intergenic
TGTTGACGATTAGGATAAAC+TGG 0.389090 3_3:+49369115 Msa0456080:three_prime_UTR
CCTTGAAGGGACCACAAAAT+CGG 0.389422 3_3:+49363980 Msa0456080:intron
TAATCCATGCGAGTTGATTC+GGG 0.389462 3_3:-49364228 None:intergenic
AAATGTAACAGATAAAGATA+TGG 0.389845 3_3:+49363576 Msa0456080:intron
GTTGTTGTTGTTGGATTGGA+GGG 0.391070 3_3:-49361138 None:intergenic
TCCATGTTTCAGTATTGCTT+GGG 0.392154 3_3:-49364047 None:intergenic
TTGAACATCCTCAAATTTGC+TGG 0.393957 3_3:+49362650 Msa0456080:CDS
ATGGAAATGCACTCAGACTT+TGG 0.394659 3_3:+49364065 Msa0456080:CDS
CTGCTGATTTGTCTAGAAAT+AGG 0.395185 3_3:-49364612 None:intergenic
CCAATCAAATGCCTTCCTTT+CGG 0.401932 3_3:-49361271 None:intergenic
TTCAGCTAAGCCGTCTCTTA+AGG 0.402458 3_3:+49364098 Msa0456080:CDS
CAGTATGACCTGAGCTTAAA+GGG 0.405764 3_3:-49364584 None:intergenic
CACCTCCTCCTTTGAGCCCA+AGG 0.408906 3_3:+49364709 Msa0456080:CDS
GGGAATTGGGAAGAAATGTT+AGG 0.410898 3_3:-49360839 None:intergenic
TCAATCAATCAAATTCAATC+TGG 0.411048 3_3:+49360720 Msa0456080:five_prime_UTR
TCCGATCCATATTTCGTAAT+CGG 0.411817 3_3:-49361361 None:intergenic
GCTTTCACTTCTGCAGCAGC+TGG 0.416373 3_3:+49368665 Msa0456080:CDS
AAGCACTACACCTTGGCTTA+AGG 0.417960 3_3:-49368646 None:intergenic
GGATTTGAAGGAGGTGGGAT+TGG 0.418453 3_3:-49361079 None:intergenic
TCACCTGCATCTAATACAAA+AGG 0.419217 3_3:+49365395 Msa0456080:CDS
GGCTGTGATTGTGGCGGTGG+TGG 0.420287 3_3:-49361163 None:intergenic
CTAACTTGAGTGATCATGTT+GGG 0.420797 3_3:+49364769 Msa0456080:CDS
GGGAGGTTTGAAATTCCATT+TGG 0.421005 3_3:-49365506 None:intergenic
TTGTGTATGATGTGGATGTT+AGG 0.421691 3_3:+49361302 Msa0456080:CDS
TCTTGCATTGCCGCAATTTG+AGG 0.422466 3_3:-49365548 None:intergenic
CAGTTACAAAAGAGGGTAGA+AGG 0.422557 3_3:+49366112 Msa0456080:CDS
AAAATCGGGAAGTGAAGCTC+TGG 0.423065 3_3:+49363995 Msa0456080:CDS
GTTTCAGACAACTGTCAAAC+AGG 0.427081 3_3:+49366634 Msa0456080:CDS
TGTTCCAGTAAAACTAAGAA+TGG 0.428432 3_3:-49364277 None:intergenic
CAACCTTGCTAGCTCCTTTG+TGG 0.428639 3_3:-49368184 None:intergenic
GAAGGAGGTGGGATTGGTTG+AGG 0.430428 3_3:-49361073 None:intergenic
CAGCATATATAGCATTCCTC+TGG 0.431524 3_3:-49364182 None:intergenic
TGCAGCAACGCCTTGAATCT+GGG 0.432152 3_3:+49366915 Msa0456080:CDS
CTGATAGACTTGCTCAAAGA+TGG 0.432453 3_3:-49368790 None:intergenic
GCAGTTATTGACAATGCAAA+AGG 0.433980 3_3:+49366053 Msa0456080:intron
CCTCACCGGCATTGGAAGGT+TGG 0.434736 3_3:-49365298 None:intergenic
ATTAGTCTCAGAGGAGGAAC+TGG 0.436553 3_3:-49364985 None:intergenic
GTGATGTATCTATTGTATCT+TGG 0.436940 3_3:+49368256 Msa0456080:CDS
TCGCACGTGCATTGTTATCA+TGG 0.436976 3_3:-49368766 None:intergenic
CGGTCCTTTACTTCATGAAA+AGG 0.437258 3_3:+49368027 Msa0456080:CDS
CTCCTCTGGTGCTGTTAATC+CGG 0.437904 3_3:+49361189 Msa0456080:CDS
CTCACCGGCATTGGAAGGTT+GGG 0.438048 3_3:-49365297 None:intergenic
ATGGGCTGTGATTGTGGCGG+TGG 0.440874 3_3:-49361166 None:intergenic
TAGAAGGCAAGTTACGTTGA+TGG 0.443622 3_3:-49368821 None:intergenic
AAAGCTTCCTGGACAACCTT+GGG 0.444345 3_3:-49364725 None:intergenic
CTCTTGACAAGCTCATTGAT+GGG 0.445198 3_3:+49362892 Msa0456080:CDS
AGTCCAATGCTGATGCTTTG+TGG 0.445348 3_3:+49366175 Msa0456080:CDS
GTAAAGGACCGTTGTTCAGC+TGG 0.445699 3_3:-49368015 None:intergenic
TACCACTTTCACTTCTACTT+CGG 0.446019 3_3:-49365069 None:intergenic
GCCAAAAGATGTCCATGAAA+AGG 0.446472 3_3:+49365337 Msa0456080:CDS
TATGCTGTGCACTTGGAATA+TGG 0.446666 3_3:+49364198 Msa0456080:CDS
GTCCAATGCTGATGCTTTGT+GGG 0.446960 3_3:+49366176 Msa0456080:CDS
AGATCAGATCCAGTGATAGA+AGG 0.447313 3_3:-49368837 None:intergenic
ATGAGACGGGCACCGGCGTT+AGG 0.447468 3_3:-49361100 None:intergenic
GCTGTTAGATCTTTGCTTAG+AGG 0.451218 3_3:+49361481 Msa0456080:CDS
AACCTTGCTAGCTCCTTTGT+GGG 0.451382 3_3:-49368183 None:intergenic
TGAGGCTTATCTTCATCATC+CGG 0.451744 3_3:-49362577 None:intergenic
ACGGTGTTGAATTGGAAAAT+TGG 0.453357 3_3:-49361008 None:intergenic
CTTTGAGCCCAAGGTTGTCC+AGG 0.453549 3_3:+49364718 Msa0456080:CDS
TTCTGATCTTGGCATTGAGA+TGG 0.454800 3_3:+49365190 Msa0456080:CDS
CAAGGATCTACCAGCAGCAT+TGG 0.455723 3_3:+49366287 Msa0456080:CDS
AGCACTACACCTTGGCTTAA+GGG 0.455982 3_3:-49368645 None:intergenic
AACTGTCAAACAGGCACTTC+AGG 0.456032 3_3:+49366643 Msa0456080:CDS
TTATTGTTGTTGTGAGGGAA+AGG 0.456439 3_3:-49360908 None:intergenic
TGTTGTTGTTGTTGGATTGG+AGG 0.457026 3_3:-49361139 None:intergenic
GAGAGTGTGGTGCGATAGGT+GGG 0.457288 3_3:+49365216 Msa0456080:CDS
TTCCTCCTCTGAGACTAATA+TGG 0.458509 3_3:+49364989 Msa0456080:CDS
AAGTCCATCCTCACCGGCAT+TGG 0.458774 3_3:-49365306 None:intergenic
AAATGATGAACTTGGCAAGC+AGG 0.458868 3_3:+49365112 Msa0456080:CDS
AGAAGGCTTGAGGCCGCCCT+AGG 0.460118 3_3:+49366129 Msa0456080:CDS
GACACCACAAAAGTTGGAAA+TGG 0.460120 3_3:+49362834 Msa0456080:CDS
CAATCACAGCCCATCTCCTC+TGG 0.461543 3_3:+49361175 Msa0456080:CDS
CAACTTGTAGGAACACATGA+TGG 0.461858 3_3:+49362918 Msa0456080:CDS
CGAGAGTGTGGTGCGATAGG+TGG 0.461859 3_3:+49365215 Msa0456080:CDS
CCTGGAAAAGTTGATTCTAC+TGG 0.461915 3_3:+49365260 Msa0456080:CDS
ATATGGATCGGATCCTAATC+CGG 0.462106 3_3:+49361372 Msa0456080:CDS
ACCTATCGCACCACACTCTC+GGG 0.462373 3_3:-49365213 None:intergenic
AATGCAAGATTCACTCAATC+AGG 0.462453 3_3:+49365562 Msa0456080:CDS
GGAAGAAGGTGAAGTGATGC+GGG 0.462695 3_3:-49360577 None:intergenic
ACAATATTGGCAGTAATTTG+AGG 0.462903 3_3:-49362595 None:intergenic
TGCCGAAGATGTTCATCTCC+TGG 0.463479 3_3:+49362418 Msa0456080:CDS
ATTTGGTTCATTGGACGAAT+CGG 0.464738 3_3:-49365489 None:intergenic
GTTATTGCTGTTCAAATAGT+CGG 0.465040 3_3:+49362616 Msa0456080:CDS
GGTTGTTGAGGTGGTTGTAG+AGG 0.467280 3_3:-49361052 None:intergenic
CCTTCCAATGCCGGTGAGGA+TGG 0.467485 3_3:+49365302 Msa0456080:CDS
AGCTGAGGCTGCACTTCACC+AGG 0.469685 3_3:-49361328 None:intergenic
ACGAAGTAGGCCCAGATTCA+AGG 0.470044 3_3:-49366925 None:intergenic
GCGTTAGGATTTGAAGGAGG+TGG 0.470524 3_3:-49361085 None:intergenic
TAGATCCTTGTTCATGAAGT+TGG 0.470586 3_3:-49366274 None:intergenic
AGAATTGACACCACAAAAGT+TGG 0.470722 3_3:+49362828 Msa0456080:CDS
CTGGCCCAACCTTCCAATGC+CGG 0.470829 3_3:+49365293 Msa0456080:CDS
CCTAATCAAAATGATGAACT+TGG 0.471249 3_3:+49365104 Msa0456080:CDS
GAAGAAGGTGGTGGCGGTGA+AGG 0.471456 3_3:-49360872 None:intergenic
TGCTATATATGCTGTGCACT+TGG 0.472612 3_3:+49364191 Msa0456080:CDS
TACAAAAGGGAAGAGACAAA+AGG 0.473506 3_3:+49365409 Msa0456080:CDS
GGGATTGGTTGAGGTTGTTG+AGG 0.477789 3_3:-49361064 None:intergenic
GATTTCTGAGCGGAAATATG+AGG 0.478102 3_3:+49368206 Msa0456080:CDS
GGCGGTGAAGGAGCGGAGGA+AGG 0.478381 3_3:-49360860 None:intergenic
CAGAATAATCATTAACAGCT+TGG 0.479225 3_3:-49364794 None:intergenic
TTGTTGAGGTGGTTGTAGAG+GGG 0.480361 3_3:-49361050 None:intergenic
CCGAAAGGAAGGCATTTGAT+TGG 0.480677 3_3:+49361271 Msa0456080:CDS
TTATTCTGTTGACAGACAAA+TGG 0.482116 3_3:+49364809 Msa0456080:CDS
ATTGGTTGAGGTTGTTGAGG+TGG 0.483340 3_3:-49361061 None:intergenic
TTCTCAGAGGGTCACAGACT+TGG 0.483986 3_3:+49362388 Msa0456080:intron
CGTAACTTGCCTTCTATCAC+TGG 0.484515 3_3:+49368828 Msa0456080:CDS
AATTGCATGCACTAGGAGAC+GGG 0.484580 3_3:-49365463 None:intergenic
GGTAGTTATTGTTGTTGTGA+GGG 0.486119 3_3:-49360913 None:intergenic
GCAATCTGTCGACCCAAAAC+CGG 0.486705 3_3:-49361391 None:intergenic
GTTGAATTGGAAAATTGGTC+TGG 0.487326 3_3:-49361003 None:intergenic
CTTGAAGGGACCACAAAATC+GGG 0.487379 3_3:+49363981 Msa0456080:intron
ATTAACAGCACCAGAGGAGA+TGG 0.487505 3_3:-49361185 None:intergenic
AGATAAAGATATGGGAAGAT+CGG 0.487871 3_3:+49363585 Msa0456080:intron
CGAGGGTCAGAGAAAGCTAA+TGG 0.488149 3_3:+49367943 Msa0456080:CDS
GGGTTAGGGTTAGGGTTTGG+GGG 0.488310 3_3:-49360812 None:intergenic
ATATCAGCATCACTACTAGA+AGG 0.488386 3_3:-49364669 None:intergenic
TGGAAATGGTGAAGCCTTTG+TGG 0.490908 3_3:+49362848 Msa0456080:CDS
GATTAGGCTGCCGAGTAGTA+AGG 0.491884 3_3:+49361246 Msa0456080:CDS
CTCAAAGGAGGAGGTGGAGA+AGG 0.492437 3_3:-49364702 None:intergenic
GCTGTGCAGGTTGATTTACA+TGG 0.492472 3_3:+49368600 Msa0456080:intron
AGTTGTGAGTTTCATGGATA+GGG 0.492763 3_3:+49368983 Msa0456080:three_prime_UTR
GCACCGGCGTTAGGATTTGA+AGG 0.492766 3_3:-49361091 None:intergenic
GATGTGGATGTTAGGTTGCC+TGG 0.492942 3_3:+49361310 Msa0456080:CDS
AATGATGAACTTGGCAAGCA+GGG 0.494755 3_3:+49365113 Msa0456080:CDS
ATTGGAGAAAACTGTAAAGA+AGG 0.494861 3_3:+49366305 Msa0456080:CDS
ACAAAAGGGAAGAGACAAAA+GGG 0.496492 3_3:+49365410 Msa0456080:CDS
GTTGGACAATTACTTGTTTG+TGG 0.497127 3_3:-49362678 None:intergenic
CAGTTGTCTGAAACTGTGCT+TGG 0.498385 3_3:-49366625 None:intergenic
AAGTTGTGAGTTTCATGGAT+AGG 0.498502 3_3:+49368982 Msa0456080:three_prime_UTR
TATTGTTGTTGTGAGGGAAA+GGG 0.498846 3_3:-49360907 None:intergenic
TAACGCCGGTGCCCGTCTCA+TGG 0.499659 3_3:+49361102 Msa0456080:CDS
CTGTTAGATCTTTGCTTAGA+GGG 0.500665 3_3:+49361482 Msa0456080:CDS
AATGTAACAGATAAAGATAT+GGG 0.501039 3_3:+49363577 Msa0456080:intron
AGCTCCTTTGTGGGATCTAG+TGG 0.501320 3_3:-49368174 None:intergenic
GCCTCTTTAGACTCGTCTGC+AGG 0.501400 3_3:+49364474 Msa0456080:CDS
GAGGATGAAGAAGGTGGTGG+CGG 0.502132 3_3:-49360878 None:intergenic
GGGTAGTTATTGTTGTTGTG+AGG 0.502297 3_3:-49360914 None:intergenic
TTGCAGGACATCTCAAATGC+AGG 0.503679 3_3:-49366830 None:intergenic
AGAGTCATTGCCAACGAAGT+AGG 0.503698 3_3:-49366938 None:intergenic
GGGTAAGAGGAGGATGAAGA+AGG 0.504358 3_3:-49360887 None:intergenic
GAAAGCTTCCTGGACAACCT+TGG 0.505770 3_3:-49364726 None:intergenic
ACACACTTACTGCTGTGATA+AGG 0.509881 3_3:-49363703 None:intergenic
TTCATGGATAGGGTCGAAAT+CGG 0.509886 3_3:+49368993 Msa0456080:three_prime_UTR
CCTTTCGGCACCTTACTACT+CGG 0.510889 3_3:-49361256 None:intergenic
AGAAAGTGTGCATATCGAAA+GGG 0.511878 3_3:-49360784 None:intergenic
GCGGTGAAGGAGCGGAGGAA+GGG 0.511933 3_3:-49360859 None:intergenic
CGAGATGCAATTACTGCTGA+AGG 0.513750 3_3:+49364447 Msa0456080:CDS
TGAATCTGGGCCTACTTCGT+TGG 0.516934 3_3:+49366928 Msa0456080:CDS
AGCCAGGAGATGAACATCTT+CGG 0.517093 3_3:-49362420 None:intergenic
CTGGACAACCTTGGGCTCAA+AGG 0.517143 3_3:-49364717 None:intergenic
GGAATTGGGAAGAAATGTTA+GGG 0.517430 3_3:-49360838 None:intergenic
CGTTAGGATTTGAAGGAGGT+GGG 0.518936 3_3:-49361084 None:intergenic
GTTCCTCTTCCCTTAAGCCA+AGG 0.519277 3_3:+49368636 Msa0456080:CDS
AGGACCGTTGTTCAGCTGGA+TGG 0.519683 3_3:-49368011 None:intergenic
TGAGGTAGAAACAAAGATCC+AGG 0.519840 3_3:+49365025 Msa0456080:CDS
TTCTACTGGAGGGGACTCGC+TGG 0.519985 3_3:+49365274 Msa0456080:CDS
ATTTGTTATGGGTTGAAACA+GGG 0.520370 3_3:+49361430 Msa0456080:CDS
AAAGGGGTTGGAGAAGGTGG+TGG 0.520585 3_3:-49360767 None:intergenic
GGTTTATTGTGTTCAGACAC+TGG 0.521084 3_3:+49364335 Msa0456080:CDS
TTCCGACTCATCTACATCAA+TGG 0.521778 3_3:+49365361 Msa0456080:CDS
TACCCACATCAACCACATCC+TGG 0.522229 3_3:-49365043 None:intergenic
GTTGGATTGGAGGGGTGCTG+AGG 0.522501 3_3:-49361129 None:intergenic
GTTCCAGTAAAACTAAGAAT+GGG 0.522950 3_3:-49364276 None:intergenic
AGGTGGTGGCGGTGAAGGAG+CGG 0.523238 3_3:-49360867 None:intergenic
GGTAAGAACTCTCAACCATC+AGG 0.523880 3_3:+49365431 Msa0456080:CDS
CCAATCGATTTGTCATCCAT+TGG 0.524133 3_3:-49362965 None:intergenic
TCAAGATACCCTTTAAGCTC+AGG 0.524270 3_3:+49364576 Msa0456080:CDS
TGCTGAGGAGAGCCATGAGA+CGG 0.524784 3_3:-49361114 None:intergenic
TGTGCCAGAGTTTGTTCTTG+AGG 0.524944 3_3:-49367975 None:intergenic
AACCTTGGGCTCAAAGGAGG+AGG 0.525226 3_3:-49364711 None:intergenic
GCAACAGAAACTACCTAGCC+AGG 0.525235 3_3:-49362436 None:intergenic
TAAACTGTCAAATATTCAGC+TGG 0.526029 3_3:+49369022 Msa0456080:three_prime_UTR
CTTGGGCTCAAAGGAGGAGG+TGG 0.526489 3_3:-49364708 None:intergenic
CGCACGTGCATTGTTATCAT+GGG 0.529399 3_3:-49368765 None:intergenic
TGGCAGTGCCAGCAAATTTG+AGG 0.529733 3_3:-49362658 None:intergenic
TGTATCGCTATTAAATTGGT+CGG 0.530759 3_3:-49364853 None:intergenic
GTTGATTCTACATTCCAGAA+AGG 0.531065 3_3:+49366869 Msa0456080:CDS
GTGGAAAATTTCTGAAGGTC+CGG 0.531628 3_3:+49362558 Msa0456080:CDS
ACCTGCAGACGAGTCTAAAG+AGG 0.532576 3_3:-49364475 None:intergenic
GATTCGTCCAATGAACCAAA+TGG 0.533055 3_3:+49365491 Msa0456080:CDS
TGGGTCTCAGCTAGTGAAGA+AGG 0.533496 3_3:+49364015 Msa0456080:CDS
GGACCGTTGTTCAGCTGGAT+GGG 0.533756 3_3:-49368010 None:intergenic
TAAGAGGAGGATGAAGAAGG+TGG 0.535073 3_3:-49360884 None:intergenic
GTTGTGAGGGAAAGGGTAAG+AGG 0.535240 3_3:-49360900 None:intergenic
AGGAAGAAGGTGAAGTGATG+CGG 0.535577 3_3:-49360578 None:intergenic
TCGATTGGTATCAGCATCAC+AGG 0.536247 3_3:+49362980 Msa0456080:CDS
CTCGAGCACTTCTCTACTCA+AGG 0.536550 3_3:-49367924 None:intergenic
GAGGAGGATGAAGAAGGTGG+TGG 0.537407 3_3:-49360881 None:intergenic
AACTGCTGCCAATGCTGCCG+CGG 0.537667 3_3:+49361216 Msa0456080:CDS
TGAAGCTAAAACTGTTACAC+TGG 0.537738 3_3:+49364644 Msa0456080:CDS
TTTCTTTGCCATCAGAAACT+GGG 0.538122 3_3:-49365148 None:intergenic
AATTGCATCTCGTGAAACAC+TGG 0.538200 3_3:-49364436 None:intergenic
TGTTGAGGTGGTTGTAGAGG+GGG 0.538228 3_3:-49361049 None:intergenic
GCTGAAGCTGAAGCTGAAGC+TGG 0.538875 3_3:-49360955 None:intergenic
AACCTGTAACATGTTGGAAA+CGG 0.540248 3_3:-49366245 None:intergenic
GAATTGCATGCACTAGGAGA+CGG 0.541168 3_3:-49365464 None:intergenic
TTTGTTATGGGTTGAAACAG+GGG 0.542294 3_3:+49361431 Msa0456080:CDS
GAGAGCCATGAGACGGGCAC+CGG 0.543288 3_3:-49361107 None:intergenic
GTTGACGCATGTCAAAAGTA+AGG 0.545493 3_3:-49369091 None:intergenic
GTTGCAGCATTGCCTCATGC+AGG 0.547266 3_3:+49364138 Msa0456080:CDS
AACAGTTCCAGTTACAAAAG+AGG 0.547439 3_3:+49366104 Msa0456080:CDS
GCTGAGGAGAGCCATGAGAC+GGG 0.547731 3_3:-49361113 None:intergenic
AGCCCACAAAGCATCAGCAT+TGG 0.548262 3_3:-49366178 None:intergenic
CATTGTTATCATGGGATCTG+AGG 0.550311 3_3:-49368757 None:intergenic
TCAAGACAGTCACTTGGAAG+CGG 0.551366 3_3:-49360543 None:intergenic
TGGTGATGGTGGTGATCGTA+AGG 0.551385 3_3:-49360935 None:intergenic
ATCTATCTGATTGAGGAAGA+AGG 0.552487 3_3:-49360591 None:intergenic
CCATCCTCACCGGCATTGGA+AGG 0.553455 3_3:-49365302 None:intergenic
CACCTGCATCTAATACAAAA+GGG 0.554215 3_3:+49365396 Msa0456080:CDS
CTGTGTTCAGACCTCATGAT+GGG 0.555408 3_3:+49363624 Msa0456080:CDS
TCGAAAGGGGTTGGAGAAGG+TGG 0.555421 3_3:-49360770 None:intergenic
CCTCCACCATTAGAAAATGC+GGG 0.555705 3_3:+49364396 Msa0456080:CDS
GACAAATGGATACAATTCAC+AGG 0.557685 3_3:+49364823 Msa0456080:CDS
GCAACCTCAAGAACAAACTC+TGG 0.559208 3_3:+49367971 Msa0456080:CDS
GCATTGGCAGCAGTTATCGC+CGG 0.559856 3_3:-49361208 None:intergenic
GTCTTGAAGTCCATCCTCAC+CGG 0.561202 3_3:-49365312 None:intergenic
GCCCGAGAGTGTGGTGCGAT+AGG 0.561638 3_3:+49365212 Msa0456080:CDS
GCACTAGGAGACGGGGAAGA+CGG 0.562596 3_3:-49365455 None:intergenic
ACAATATGATCAGGCTGGTG+TGG 0.565224 3_3:-49363680 None:intergenic
CTGATTTGTCAATGTGCCAA+TGG 0.565563 3_3:+49362949 Msa0456080:CDS
TGATGACATGCAATAAAAGA+CGG 0.565984 3_3:-49368869 None:intergenic
TTTGTATTAGATGCAGGTGA+TGG 0.566249 3_3:-49365392 None:intergenic
TGCCGAAGTAGAAGTGAAAG+TGG 0.567144 3_3:+49365067 Msa0456080:CDS
ATTGAGATGGCCCGAGAGTG+TGG 0.569188 3_3:+49365203 Msa0456080:CDS
TAATCAAACCTGTAACATGT+TGG 0.569223 3_3:-49366251 None:intergenic
AACTTGTAGGAACACATGAT+GGG 0.569461 3_3:+49362919 Msa0456080:CDS
ATCCCACAAAGGAGCTAGCA+AGG 0.570393 3_3:+49368181 Msa0456080:CDS
GTAGTAAGGTGCCGAAAGGA+AGG 0.570482 3_3:+49361260 Msa0456080:CDS
TGGTGGCGGTGAAGGAGCGG+AGG 0.572382 3_3:-49360864 None:intergenic
AGAATCAACTTGCTCAAACA+TGG 0.573208 3_3:-49366855 None:intergenic
ACACCTTGGCTTAAGGGAAG+AGG 0.574273 3_3:-49368639 None:intergenic
GAGGAGATGGGCTGTGATTG+TGG 0.574317 3_3:-49361172 None:intergenic
TACCATTGATGTAGATGAGT+CGG 0.574582 3_3:-49365363 None:intergenic
AAGAAAGTGTGCATATCGAA+AGG 0.575176 3_3:-49360785 None:intergenic
TAATCCCGAATCAACTCGCA+TGG 0.576654 3_3:+49364224 Msa0456080:CDS
ACATGTCCCGAAAGCTCTCG+TGG 0.578490 3_3:+49368706 Msa0456080:CDS
GCCTCCACCATTAGAAAATG+CGG 0.579140 3_3:+49364395 Msa0456080:CDS
TCATTTACATGTCGTCAGCA+TGG 0.579551 3_3:-49368895 None:intergenic
TCAATCTGTGATTAGATTTG+GGG 0.580705 3_3:-49360681 None:intergenic
TGGAGGATCTTCTGCCACAA+AGG 0.581110 3_3:-49362862 None:intergenic
TCTTGACAAGCTCATTGATG+GGG 0.581398 3_3:+49362893 Msa0456080:CDS
TGAAGTGCAGCCTCAGCTTG+AGG 0.582585 3_3:+49361333 Msa0456080:CDS
AAGAATGCATCCTTAAGAGA+CGG 0.583417 3_3:-49364108 None:intergenic
CAACAAAACCCAGTTTCTGA+TGG 0.584907 3_3:+49365140 Msa0456080:CDS
GTGTGCATATCGAAAGGGGT+TGG 0.585473 3_3:-49360779 None:intergenic
AGAAACAAAGATCCAGGATG+TGG 0.585960 3_3:+49365031 Msa0456080:CDS
GAAGTAGAAGTGAAAGTGGT+AGG 0.586003 3_3:+49365071 Msa0456080:CDS
AGCTCGAAGCTACTGTAGCT+AGG 0.586804 3_3:+49366597 Msa0456080:CDS
TCTAACTTGAGTGATCATGT+TGG 0.587418 3_3:+49364768 Msa0456080:CDS
CAGCCTAATCAACGCTGCCG+CGG 0.587536 3_3:-49361233 None:intergenic
TGATAGACTTGCTCAAAGAT+GGG 0.589191 3_3:-49368789 None:intergenic
TTTATGCAATAGAGAGGAGT+GGG 0.590421 3_3:+49366533 Msa0456080:intron
AGTAAAACTAAGAATGGGCA+TGG 0.590667 3_3:-49364271 None:intergenic
AGCATATATAGCATTCCTCT+GGG 0.591999 3_3:-49364181 None:intergenic
GGAATTTCAAGACAGTCACT+TGG 0.592961 3_3:-49360549 None:intergenic
ATTGTTATCATGGGATCTGA+GGG 0.593684 3_3:-49368756 None:intergenic
GGAAAAGTTGATTCTACTGG+AGG 0.593921 3_3:+49365263 Msa0456080:CDS
TTTGTGTGGAAAATTTCTGA+AGG 0.594082 3_3:+49362553 Msa0456080:CDS
GCTGAAGCTGAAGCTGGTGA+TGG 0.594554 3_3:-49360949 None:intergenic
GTGATAAGGACAATATGATC+AGG 0.594619 3_3:-49363689 None:intergenic
GAAGGCTTGAGGCCGCCCTA+GGG 0.594828 3_3:+49366130 Msa0456080:CDS
TGATCACTCAAGTTAGATTG+TGG 0.594924 3_3:-49364762 None:intergenic
AAGATGTTCATCTCCTGGCT+AGG 0.595031 3_3:+49362423 Msa0456080:CDS
GATGACATGCAATAAAAGAC+GGG 0.595864 3_3:-49368868 None:intergenic
GCTGTGTTCAGACCTCATGA+TGG 0.596771 3_3:+49363623 Msa0456080:CDS
GACAACCTTGGGCTCAAAGG+AGG 0.599545 3_3:-49364714 None:intergenic
ATATCGAAAGGGGTTGGAGA+AGG 0.600713 3_3:-49360773 None:intergenic
CGCCGGATTAACAGCACCAG+AGG 0.600999 3_3:-49361191 None:intergenic
TTGTTGTTGTTGGATTGGAG+GGG 0.601000 3_3:-49361137 None:intergenic
ACAGTTCCAGTTACAAAAGA+GGG 0.601257 3_3:+49366105 Msa0456080:CDS
AAATCGGGAAGTGAAGCTCT+GGG 0.602446 3_3:+49363996 Msa0456080:CDS
TTCGTTGGCAATGACTCTAA+GGG 0.602876 3_3:+49366943 Msa0456080:CDS
TGAGGTCTGAACACAGCAAG+TGG 0.603487 3_3:-49363617 None:intergenic
TTAACAGCACCAGAGGAGAT+GGG 0.604420 3_3:-49361184 None:intergenic
GACGGGGAAGACGGACCTGA+TGG 0.604450 3_3:-49365446 None:intergenic
TGCAGGACATCTCAAATGCA+GGG 0.605690 3_3:-49366829 None:intergenic
GAAGTGAAAGCACTACACCT+TGG 0.605965 3_3:-49368653 None:intergenic
TCTCAGCTAGTGAAGAAGGT+TGG 0.606769 3_3:+49364019 Msa0456080:CDS
GATCCAGGATGTGGTTGATG+TGG 0.607715 3_3:+49365040 Msa0456080:CDS
TAAGGACAATATGATCAGGC+TGG 0.608151 3_3:-49363685 None:intergenic
TCGGTTGAATTGCATGCACT+AGG 0.610664 3_3:-49365470 None:intergenic
TGCTGTTCAAATAGTCGGAG+AGG 0.612426 3_3:+49362621 Msa0456080:CDS
AAAAGTTGATTCTACTGGAG+GGG 0.612535 3_3:+49365265 Msa0456080:CDS
ATCAGCATCACAGGATGGCA+CGG 0.614223 3_3:+49362989 Msa0456080:CDS
TTCTACATTCCAGAAAGGCA+TGG 0.615387 3_3:+49366874 Msa0456080:CDS
GTATTAGATGCAGGTGATGG+TGG 0.615793 3_3:-49365389 None:intergenic
GGGCATGGTCACAGTAAACT+CGG 0.617383 3_3:-49364256 None:intergenic
GTGAGGGAAAGGGTAAGAGG+AGG 0.617899 3_3:-49360897 None:intergenic
AACATTATCATCTACTATCG+CGG 0.618969 3_3:+49366383 Msa0456080:CDS
CCATCAATGAGCTTGTCAAG+AGG 0.619243 3_3:-49362891 None:intergenic
ACTTACATTACAGAGGAACC+TGG 0.621956 3_3:+49365242 Msa0456080:CDS
CCGAGTAGTAAGGTGCCGAA+AGG 0.622586 3_3:+49361256 Msa0456080:CDS
AGATAATGTACAAACCTGGA+AGG 0.622932 3_3:-49366409 None:intergenic
GATTACCAACTTCATGAACA+AGG 0.623210 3_3:+49366269 Msa0456080:CDS
CAAGCAAGTAGCACTGAGAG+TGG 0.625169 3_3:+49364546 Msa0456080:CDS
TGATCATGTTGTGTATGATG+TGG 0.628089 3_3:+49361294 Msa0456080:CDS
GAAGCTGAAGCTGGTGATGG+TGG 0.628706 3_3:-49360946 None:intergenic
CAGATGGCCGTGTCTTTGTG+TGG 0.629133 3_3:+49362539 Msa0456080:CDS
GTGTGAGATCTATCTGATTG+AGG 0.629980 3_3:-49360598 None:intergenic
CCAATGGATGACAAATCGAT+TGG 0.632550 3_3:+49362965 Msa0456080:CDS
AGAGTGTGGTGCGATAGGTG+GGG 0.633015 3_3:+49365217 Msa0456080:CDS
TATGGTCGACAGAGTGAGTG+AGG 0.634229 3_3:+49365007 Msa0456080:CDS
CCAACCTTCCAATGCCGGTG+AGG 0.635391 3_3:+49365298 Msa0456080:CDS
TAACTTGAGTGATCATGTTG+GGG 0.636096 3_3:+49364770 Msa0456080:CDS
GAAAAGTTGATTCTACTGGA+GGG 0.636635 3_3:+49365264 Msa0456080:CDS
TTTGCTTAGAGGGCACACTC+AGG 0.636776 3_3:+49361492 Msa0456080:CDS
GCCGATTACGAAATATGGAT+CGG 0.637664 3_3:+49361360 Msa0456080:CDS
TTCCATGCTTCTCCCTAGGG+CGG 0.637783 3_3:-49366142 None:intergenic
ATGATGAACTTGGCAAGCAG+GGG 0.638373 3_3:+49365114 Msa0456080:CDS
TGAAAGTGGTAGGTGAAGCA+AGG 0.639440 3_3:+49365081 Msa0456080:CDS
TTTGTGGGCTAGAATTCAAG+AGG 0.639602 3_3:+49366191 Msa0456080:CDS
GATGGTGTAACCAGATGAGT+TGG 0.640662 3_3:-49364948 None:intergenic
AAAAGAGGGTAGAAGGCTTG+AGG 0.641978 3_3:+49366119 Msa0456080:CDS
AAATAGCAATCCTCAAATTG+CGG 0.643611 3_3:+49365538 Msa0456080:CDS
GTTGAAACAGGGGAATATCA+GGG 0.644466 3_3:+49361441 Msa0456080:CDS
GTGTAGGGAATGAAATTGAA+CGG 0.645057 3_3:-49361027 None:intergenic
AAAACAGGATGCCCATCATG+AGG 0.647371 3_3:-49363635 None:intergenic
GGCCGCCCTAGGGAGAAGCA+TGG 0.647761 3_3:+49366140 Msa0456080:CDS
ATCGGCGCAACCTCAAGCTG+AGG 0.648348 3_3:-49361343 None:intergenic
GCAGAAACAAATGACAATGA+CGG 0.648353 3_3:+49366080 Msa0456080:CDS
ATAGAGAGGAGTGGGCGACA+AGG 0.651126 3_3:+49366541 Msa0456080:intron
CTTTATGCAATAGAGAGGAG+TGG 0.652010 3_3:+49366532 Msa0456080:intron
TTGGTATCAGCATCACAGGA+TGG 0.653833 3_3:+49362984 Msa0456080:CDS
TCCCAAGCAATACTGAAACA+TGG 0.654560 3_3:+49364046 Msa0456080:CDS
GAAAGTGTGCATATCGAAAG+GGG 0.655799 3_3:-49360783 None:intergenic
TTCTGAGCGGAAATATGAGG+AGG 0.657507 3_3:+49368209 Msa0456080:CDS
CTTGAGTAGAGAAGTGCTCG+AGG 0.660682 3_3:+49367925 Msa0456080:CDS
GACCATATTAGTCTCAGAGG+AGG 0.670902 3_3:-49364991 None:intergenic
TGTAGGAACACATGATGGGG+AGG 0.672359 3_3:+49362923 Msa0456080:CDS
TTGAGTAGAGAAGTGCTCGA+GGG 0.672366 3_3:+49367926 Msa0456080:CDS
CCTCCTTCAAATCCTAACGC+CGG 0.674882 3_3:+49361088 Msa0456080:CDS
ATCCAGGATGTGGTTGATGT+GGG 0.675092 3_3:+49365041 Msa0456080:CDS
AGTAAAAGCAGACCTGCATG+AGG 0.678389 3_3:-49364150 None:intergenic
GTCGACCATATTAGTCTCAG+AGG 0.678657 3_3:-49364994 None:intergenic
CTGCCCATCCAGCTGAACAA+CGG 0.685448 3_3:+49368007 Msa0456080:CDS
GAGAGGAGTGGGCGACAAGG+CGG 0.686510 3_3:+49366544 Msa0456080:intron
ACTTGTAGGAACACATGATG+GGG 0.688108 3_3:+49362920 Msa0456080:CDS
TGAACAATATGTTCCCCATG+AGG 0.697153 3_3:-49364312 None:intergenic
CCGGCGTTAGGATTTGAAGG+AGG 0.701239 3_3:-49361088 None:intergenic
GAGATGGGCTGTGATTGTGG+CGG 0.702622 3_3:-49361169 None:intergenic
GGTGATGGTGGTGATCGTAA+GGG 0.706295 3_3:-49360934 None:intergenic
GCTCTCGTGGATGACAGACG+TGG 0.709530 3_3:+49368719 Msa0456080:CDS
TGGGGAGACTTACATTACAG+AGG 0.718194 3_3:+49365235 Msa0456080:CDS
ATTGCATGCACTAGGAGACG+GGG 0.723410 3_3:-49365462 None:intergenic
TAGCAAGGTTGATTTCTGAG+CGG 0.729407 3_3:+49368196 Msa0456080:CDS
TGACGATTAGGATAAACTGG+AGG 0.733228 3_3:+49369118 Msa0456080:three_prime_UTR
GGCACCACTAGATCCCACAA+AGG 0.749952 3_3:+49368170 Msa0456080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAGTATTTTATTTGAA+AGG + chr3_3:49361981-49362000 Msa0456080:intron 10.0%
!!! TTTTTATTTTGATTCATATT+TGG + chr3_3:49363070-49363089 Msa0456080:intron 10.0%
!!! TTTTATTTTGATTCATATTT+GGG + chr3_3:49363071-49363090 Msa0456080:intron 10.0%
!!! TAATATAACTTTTAATAGAA+AGG - chr3_3:49363388-49363407 None:intergenic 10.0%
!!! ATAAATAAAGTTAGTTTTAT+GGG - chr3_3:49363911-49363930 None:intergenic 10.0%
!!! TATAAATAAAGTTAGTTTTA+TGG - chr3_3:49363912-49363931 None:intergenic 10.0%
!! AAAAAAAACATAAAATTAAG+CGG - chr3_3:49367076-49367095 None:intergenic 10.0%
!! TTTAAAAAATAAAAGAATCT+AGG - chr3_3:49367697-49367716 None:intergenic 10.0%
!!! TTCTATTTATTTTTTAACAA+CGG + chr3_3:49369144-49369163 Msa0456080:three_prime_UTR 10.0%
!!! AATAAGTCTTATATTTGTTA+TGG + chr3_3:49361418-49361437 Msa0456080:CDS 15.0%
!!! ATAAGTCTTATATTTGTTAT+GGG + chr3_3:49361419-49361438 Msa0456080:CDS 15.0%
!!! TTTGTAATTGTTTTGTAATT+GGG + chr3_3:49361556-49361575 Msa0456080:intron 15.0%
!!! GTTTTATCTTTATCAATATT+AGG + chr3_3:49361698-49361717 Msa0456080:intron 15.0%
!!! ATTGTAAAGTATTATATTGA+TGG + chr3_3:49362012-49362031 Msa0456080:intron 15.0%
!! ATCAAATTGTATGTTATTAA+TGG + chr3_3:49362306-49362325 Msa0456080:intron 15.0%
!!! TTTTTTTAATTATTCTCAGA+GGG + chr3_3:49362376-49362395 Msa0456080:intron 15.0%
!!! TTAATTAAACATTTTCATTC+AGG + chr3_3:49362770-49362789 Msa0456080:intron 15.0%
!! TCTATTAAAAGTTATATTAC+AGG + chr3_3:49363389-49363408 Msa0456080:intron 15.0%
!! CTATTAAAAGTTATATTACA+GGG + chr3_3:49363390-49363409 Msa0456080:intron 15.0%
!!! TAAATAAAGTTAGTTTTATG+GGG - chr3_3:49363910-49363929 None:intergenic 15.0%
!! AGAATTAAGAGTAAATAATT+TGG + chr3_3:49367005-49367024 Msa0456080:intron 15.0%
!! TAGATGAAAATTAATAATTG+TGG - chr3_3:49367597-49367616 None:intergenic 15.0%
!! TTTAAAAGCTATTAATTTCT+TGG + chr3_3:49367711-49367730 Msa0456080:intron 15.0%
!! TTATTCTCTTGTTCATTTAT+TGG + chr3_3:49361530-49361549 Msa0456080:intron 20.0%
!!! CTTTGTAATTGTTTTGTAAT+TGG + chr3_3:49361555-49361574 Msa0456080:intron 20.0%
!! TAGATTTGATGAAAAAAATG+AGG + chr3_3:49361645-49361664 Msa0456080:intron 20.0%
!! CATATCATAACATTTGTATA+AGG + chr3_3:49361738-49361757 Msa0456080:intron 20.0%
!!! AATAGTTCAATGTTATTTGT+TGG + chr3_3:49361892-49361911 Msa0456080:intron 20.0%
!!! CTGTTATAATTTTGTATGAA+GGG + chr3_3:49362168-49362187 Msa0456080:intron 20.0%
!!! CAGCAAATAAATTTTGAATA+AGG - chr3_3:49362234-49362253 None:intergenic 20.0%
!! CTTATTCAAAATTTATTTGC+TGG + chr3_3:49362232-49362251 Msa0456080:intron 20.0%
!! GATTTAATTAGAGGATAAAA+CGG - chr3_3:49362352-49362371 None:intergenic 20.0%
!! AAAAAGAGAGATTTAATTAG+AGG - chr3_3:49362361-49362380 None:intergenic 20.0%
!!! CTTTTTTTAATTATTCTCAG+AGG + chr3_3:49362375-49362394 Msa0456080:intron 20.0%
!!! TTTTTTCTTTTTTACAGTGT+TGG + chr3_3:49362514-49362533 Msa0456080:intron 20.0%
!! ATTAATATCACAAGAATACA+AGG - chr3_3:49362755-49362774 None:intergenic 20.0%
!! GAAAATCAAACACAAATATA+TGG + chr3_3:49363215-49363234 Msa0456080:intron 20.0%
!! AATATATACAGTAGACTTAA+TGG + chr3_3:49363275-49363294 Msa0456080:intron 20.0%
!! CAATCAAACAAATAAAAAAC+AGG - chr3_3:49363520-49363539 None:intergenic 20.0%
!! AAATGTAACAGATAAAGATA+TGG + chr3_3:49363576-49363595 Msa0456080:intron 20.0%
!! AATGTAACAGATAAAGATAT+GGG + chr3_3:49363577-49363596 Msa0456080:intron 20.0%
!!! AATTGATTTTGTTTTTGAAG+TGG + chr3_3:49363848-49363867 Msa0456080:intron 20.0%
!!! AAATAAAGTTAGTTTTATGG+GGG - chr3_3:49363909-49363928 None:intergenic 20.0%
!! AAAGAAATAAAAAACACATC+TGG - chr3_3:49365876-49365895 None:intergenic 20.0%
!!! TACAACAAAAATGAATGTTT+TGG + chr3_3:49367095-49367114 Msa0456080:intron 20.0%
!! TTCAGTTTATATGGTAATAA+TGG + chr3_3:49368115-49368134 Msa0456080:intron 20.0%
!! TGTCTGTAAAATTGAAAATA+AGG - chr3_3:49368311-49368330 None:intergenic 20.0%
!!! TATTTTATTTAGTTGAGATG+AGG + chr3_3:49368442-49368461 Msa0456080:intron 20.0%
!!! ATTTTATTTAGTTGAGATGA+GGG + chr3_3:49368443-49368462 Msa0456080:intron 20.0%
! ATCAATCTGTGATTAGATTT+GGG - chr3_3:49360685-49360704 None:intergenic 25.0%
! AATCAATCTGTGATTAGATT+TGG - chr3_3:49360686-49360705 None:intergenic 25.0%
! TCAATCAATCAAATTCAATC+TGG + chr3_3:49360720-49360739 Msa0456080:five_prime_UTR 25.0%
! TTTGTAATTGGGAAAATTAG+AGG + chr3_3:49361567-49361586 Msa0456080:intron 25.0%
! AAAATTAGAGGAAAGACTTT+AGG + chr3_3:49361579-49361598 Msa0456080:intron 25.0%
! AAATTAGAGGAAAGACTTTA+GGG + chr3_3:49361580-49361599 Msa0456080:intron 25.0%
! AGATGAAAAAGATACAAATG+TGG + chr3_3:49361917-49361936 Msa0456080:intron 25.0%
! AAGTAACAGATATCAACAAT+TGG + chr3_3:49362075-49362094 Msa0456080:intron 25.0%
!! GCTGTTATAATTTTGTATGA+AGG + chr3_3:49362167-49362186 Msa0456080:intron 25.0%
!! TGTTGCCTGAAATTTTTAAA+TGG + chr3_3:49362453-49362472 Msa0456080:intron 25.0%
!! TTTGTTTGTCTATGGATTAT+GGG + chr3_3:49362481-49362500 Msa0456080:intron 25.0%
! TTGAACAGCAATAACAATAT+TGG - chr3_3:49362611-49362630 None:intergenic 25.0%
!!! ATTCAGGAAATTTTGATAGT+TGG + chr3_3:49362786-49362805 Msa0456080:intron 25.0%
!!! GAAATTTTGATAGTTGGTAT+GGG + chr3_3:49362792-49362811 Msa0456080:CDS 25.0%
! GATTTCTTCAACAATTTAAG+TGG + chr3_3:49363108-49363127 Msa0456080:intron 25.0%
!! AACTTTTAATAGAAAGGACA+AGG - chr3_3:49363382-49363401 None:intergenic 25.0%
! TTCAAACTAATGAAGATAAC+AGG - chr3_3:49363454-49363473 None:intergenic 25.0%
! AAAAATGTAGCAGAAAAAAC+AGG - chr3_3:49363653-49363672 None:intergenic 25.0%
!!! ATCATTTTTTATAATGCAGC+AGG + chr3_3:49363728-49363747 Msa0456080:intron 25.0%
!! TTGATAACAGTAATGAACTA+CGG - chr3_3:49363881-49363900 None:intergenic 25.0%
!!! TTGTTTTTACTTAACCTTGA+AGG + chr3_3:49363966-49363985 Msa0456080:intron 25.0%
!!! TGTTTTTACTTAACCTTGAA+GGG + chr3_3:49363967-49363986 Msa0456080:intron 25.0%
! TCTTTGTATCGCTATTAAAT+TGG - chr3_3:49364860-49364879 None:intergenic 25.0%
! TGATGACAATAAAAACAAAC+AGG + chr3_3:49364881-49364900 Msa0456080:CDS 25.0%
!!! CTTTTTAGAGTGTATTTAGA+TGG + chr3_3:49365648-49365667 Msa0456080:intron 25.0%
! TAGCGTTTAAAGAGAAAAAT+GGG - chr3_3:49365806-49365825 None:intergenic 25.0%
! AATAAAAAACACATCTGGAT+GGG - chr3_3:49365871-49365890 None:intergenic 25.0%
! AAATAAAAAACACATCTGGA+TGG - chr3_3:49365872-49365891 None:intergenic 25.0%
! ATTTCTTTATATTAAGGCTG+AGG + chr3_3:49365888-49365907 Msa0456080:intron 25.0%
!!! CTACTTTTTTACTTTTTCGA+TGG + chr3_3:49365938-49365957 Msa0456080:intron 25.0%
! AAATACACAAGACAATTCTT+TGG - chr3_3:49365995-49366014 None:intergenic 25.0%
! AAAGAATTGTCTTGTGTATT+TGG + chr3_3:49365994-49366013 Msa0456080:intron 25.0%
!! TAGTCCATTTTCTTCTTATT+TGG + chr3_3:49366031-49366050 Msa0456080:intron 25.0%
! TGTGAAATAATTTCATATGC+AGG + chr3_3:49366772-49366791 Msa0456080:intron 25.0%
! TTTAACACTCACTTTCTTAT+TGG + chr3_3:49367436-49367455 Msa0456080:intron 25.0%
! TTAAACACTCACTTCATTAT+TGG - chr3_3:49367534-49367553 None:intergenic 25.0%
! TATATCAAAGCAGAAATAGA+TGG - chr3_3:49367660-49367679 None:intergenic 25.0%
! CCATATAAACTGAATAGTAT+GGG - chr3_3:49368109-49368128 None:intergenic 25.0%
! ACCATATAAACTGAATAGTA+TGG - chr3_3:49368110-49368129 None:intergenic 25.0%
!! GTTCAATTTTTATCTCTGAT+TGG + chr3_3:49368351-49368370 Msa0456080:intron 25.0%
!! TACATTGTGATATTTTACGA+AGG - chr3_3:49368506-49368525 None:intergenic 25.0%
! TATACTACATGTTAAGGTAA+TGG - chr3_3:49368536-49368555 None:intergenic 25.0%
! TACCTTAACATGTAGTATAT+TGG + chr3_3:49368537-49368556 Msa0456080:intron 25.0%
TCAATCTGTGATTAGATTTG+GGG - chr3_3:49360684-49360703 None:intergenic 30.0%
!! TATTTGTTATGGGTTGAAAC+AGG + chr3_3:49361429-49361448 Msa0456080:CDS 30.0%
!! ATTTGTTATGGGTTGAAACA+GGG + chr3_3:49361430-49361449 Msa0456080:CDS 30.0%
AATTAGAGGAAAGACTTTAG+GGG + chr3_3:49361581-49361600 Msa0456080:intron 30.0%
TATTAGGTCAAAAGAGTTTG+TGG + chr3_3:49361714-49361733 Msa0456080:intron 30.0%
TCTTTATGAATGTTTGCTCT+AGG + chr3_3:49361826-49361845 Msa0456080:intron 30.0%
CGCTTGAGAAAATAATAAAG+TGG - chr3_3:49362038-49362057 None:intergenic 30.0%
!! TGTTTTGTTAATTGTAGCAG+AGG + chr3_3:49362199-49362218 Msa0456080:intron 30.0%
TTAATGGCATAATCACTGAA+AGG + chr3_3:49362322-49362341 Msa0456080:intron 30.0%
CAAGGCCATTTAAAAATTTC+AGG - chr3_3:49362461-49362480 None:intergenic 30.0%
AATCCATAGACAAACAAACA+AGG - chr3_3:49362479-49362498 None:intergenic 30.0%
! GTTTGTTTGTCTATGGATTA+TGG + chr3_3:49362480-49362499 Msa0456080:intron 30.0%
! AAATTTTCCACACAAAGACA+CGG - chr3_3:49362549-49362568 None:intergenic 30.0%
TTTGTGTGGAAAATTTCTGA+AGG + chr3_3:49362553-49362572 Msa0456080:CDS 30.0%
ACAATATTGGCAGTAATTTG+AGG - chr3_3:49362598-49362617 None:intergenic 30.0%
! GTTATTGCTGTTCAAATAGT+CGG + chr3_3:49362616-49362635 Msa0456080:CDS 30.0%
ACAACAAAACAAGATAGTGT+TGG - chr3_3:49362699-49362718 None:intergenic 30.0%
! GTTCTAAATCCTAAAAGCAA+TGG + chr3_3:49362717-49362736 Msa0456080:intron 30.0%
! AATCCTAAAAGCAATGGTTT+TGG + chr3_3:49362723-49362742 Msa0456080:intron 30.0%
!! AAACCAAAACCATTGCTTTT+AGG - chr3_3:49362729-49362748 None:intergenic 30.0%
!! GGAAATTTTGATAGTTGGTA+TGG + chr3_3:49362791-49362810 Msa0456080:intron 30.0%
GATGAGATTAAATAATGCAG+TGG + chr3_3:49363130-49363149 Msa0456080:intron 30.0%
GAATGTTCTTTGAACATATG+TGG + chr3_3:49363156-49363175 Msa0456080:intron 30.0%
AGTCACTAGAAAGATAACAA+TGG + chr3_3:49363242-49363261 Msa0456080:intron 30.0%
TGGGAAACAAATATGAATCT+GGG + chr3_3:49363322-49363341 Msa0456080:intron 30.0%
! ATATTACAGGGTTGTTTCAT+TGG + chr3_3:49363402-49363421 Msa0456080:intron 30.0%
! TATTACAGGGTTGTTTCATT+GGG + chr3_3:49363403-49363422 Msa0456080:intron 30.0%
GTTTCATTGGGAAAAATTAC+TGG + chr3_3:49363415-49363434 Msa0456080:intron 30.0%
AATAGAAGACAAACGTGATT+AGG - chr3_3:49363553-49363572 None:intergenic 30.0%
AGATAAAGATATGGGAAGAT+CGG + chr3_3:49363585-49363604 Msa0456080:intron 30.0%
GTTCCAGTAAAACTAAGAAT+GGG - chr3_3:49364279-49364298 None:intergenic 30.0%
TGTTCCAGTAAAACTAAGAA+TGG - chr3_3:49364280-49364299 None:intergenic 30.0%
CAGAATAATCATTAACAGCT+TGG - chr3_3:49364797-49364816 None:intergenic 30.0%
TTATTCTGTTGACAGACAAA+TGG + chr3_3:49364809-49364828 Msa0456080:CDS 30.0%
TGTATCGCTATTAAATTGGT+CGG - chr3_3:49364856-49364875 None:intergenic 30.0%
GTTGCTTAAAAATGACAGAA+GGG - chr3_3:49364929-49364948 None:intergenic 30.0%
!!! CCAAGTTCATCATTTTGATT+AGG - chr3_3:49365107-49365126 None:intergenic 30.0%
CCTAATCAAAATGATGAACT+TGG + chr3_3:49365104-49365123 Msa0456080:CDS 30.0%
! AGAAAAATTCTTTTGCTCTC+AGG + chr3_3:49365166-49365185 Msa0456080:CDS 30.0%
! TGAAATTCCATTTGGTTCAT+TGG - chr3_3:49365501-49365520 None:intergenic 30.0%
!!! GATTGCTATTTTCAGTACAT+GGG - chr3_3:49365529-49365548 None:intergenic 30.0%
AAATAGCAATCCTCAAATTG+CGG + chr3_3:49365538-49365557 Msa0456080:CDS 30.0%
! ATCGATGGGAAGTTTTTATT+TGG - chr3_3:49365746-49365765 None:intergenic 30.0%
CTAGCGTTTAAAGAGAAAAA+TGG - chr3_3:49365807-49365826 None:intergenic 30.0%
ACTGCCAAATAAGAAGAAAA+TGG - chr3_3:49366038-49366057 None:intergenic 30.0%
TAATCAAACCTGTAACATGT+TGG - chr3_3:49366254-49366273 None:intergenic 30.0%
ATTGGAGAAAACTGTAAAGA+AGG + chr3_3:49366305-49366324 Msa0456080:CDS 30.0%
! GATAATGTTTTCTCAATAGC+AGG - chr3_3:49366372-49366391 None:intergenic 30.0%
AACATTATCATCTACTATCG+CGG + chr3_3:49366383-49366402 Msa0456080:CDS 30.0%
TCAAAGATAATGTACAAACC+TGG - chr3_3:49366416-49366435 None:intergenic 30.0%
!!! ATGAATGTTTTGGCTTAATG+TGG + chr3_3:49367105-49367124 Msa0456080:intron 30.0%
!!! TGAATGTTTTGGCTTAATGT+GGG + chr3_3:49367106-49367125 Msa0456080:intron 30.0%
ATACAAAACAACAGGGTAAA+GGG - chr3_3:49367143-49367162 None:intergenic 30.0%
AATACAAAACAACAGGGTAA+AGG - chr3_3:49367144-49367163 None:intergenic 30.0%
GCATCAAATACAAAACAACA+GGG - chr3_3:49367150-49367169 None:intergenic 30.0%
AGCATCAAATACAAAACAAC+AGG - chr3_3:49367151-49367170 None:intergenic 30.0%
! TGCAAGTAATTTGAGACATT+TGG - chr3_3:49367183-49367202 None:intergenic 30.0%
AAATGTCTCAAATTACTTGC+AGG + chr3_3:49367182-49367201 Msa0456080:intron 30.0%
AATGTCTCAAATTACTTGCA+GGG + chr3_3:49367183-49367202 Msa0456080:intron 30.0%
TACAGTGAAAGAGAAAACAT+GGG + chr3_3:49367276-49367295 Msa0456080:intron 30.0%
AATTGCAATTAATATCCGAG+TGG - chr3_3:49367337-49367356 None:intergenic 30.0%
CTCGGATATTAATTGCAATT+TGG + chr3_3:49367337-49367356 Msa0456080:intron 30.0%
AAGAAAGTGAGTGTTAAAGA+GGG - chr3_3:49367434-49367453 None:intergenic 30.0%
TAAGAAAGTGAGTGTTAAAG+AGG - chr3_3:49367435-49367454 None:intergenic 30.0%
!! TTCATTATTGGCTCAAATCA+AGG - chr3_3:49367522-49367541 None:intergenic 30.0%
! TCTAGACTAGATAAAGCTTT+TGG + chr3_3:49367794-49367813 Msa0456080:intron 30.0%
AGAATACCAACATTGAGATA+CGG - chr3_3:49367852-49367871 None:intergenic 30.0%
! AACTGATGATGCTGAATTAA+TGG - chr3_3:49367897-49367916 None:intergenic 30.0%
CTTTACTTCATGAAAAGGTA+GGG + chr3_3:49368032-49368051 Msa0456080:intron 30.0%
CCCATACTATTCAGTTTATA+TGG + chr3_3:49368106-49368125 Msa0456080:intron 30.0%
!! GCAATTTTGTTATGCATATC+AGG + chr3_3:49368143-49368162 Msa0456080:intron 30.0%
GTGATGTATCTATTGTATCT+TGG + chr3_3:49368256-49368275 Msa0456080:CDS 30.0%
AAAATTGAACACATTCCAAC+AGG - chr3_3:49368341-49368360 None:intergenic 30.0%
!! ATTTTTATCTCTGATTGGCT+TGG + chr3_3:49368356-49368375 Msa0456080:intron 30.0%
!!! TTTTTATCTCTGATTGGCTT+GGG + chr3_3:49368357-49368376 Msa0456080:intron 30.0%
!! AGATGAGGGATTTTAATGTA+GGG + chr3_3:49368457-49368476 Msa0456080:intron 30.0%
GACCAATATACTACATGTTA+AGG - chr3_3:49368542-49368561 None:intergenic 30.0%
! TCTTGATGGTCAATTACATA+AGG - chr3_3:49368564-49368583 None:intergenic 30.0%
AAATGAAGTGATTCTCTTGA+TGG - chr3_3:49368578-49368597 None:intergenic 30.0%
! TTTACATGGACTTTTGACAT+TGG + chr3_3:49368614-49368633 Msa0456080:CDS 30.0%
TGATGACATGCAATAAAAGA+CGG - chr3_3:49368872-49368891 None:intergenic 30.0%
TTGAACTCTTCTGATACAAT+TGG + chr3_3:49368948-49368967 Msa0456080:three_prime_UTR 30.0%
TAAACTGTCAAATATTCAGC+TGG + chr3_3:49369022-49369041 Msa0456080:three_prime_UTR 30.0%
ATCTATCTGATTGAGGAAGA+AGG - chr3_3:49360594-49360613 None:intergenic 35.0%
! AGATTTGGGGAATTTTGTGA+AGG - chr3_3:49360671-49360690 None:intergenic 35.0%
! AGAAAGTGTGCATATCGAAA+GGG - chr3_3:49360787-49360806 None:intergenic 35.0%
! AAGAAAGTGTGCATATCGAA+AGG - chr3_3:49360788-49360807 None:intergenic 35.0%
AAATGTTAGGGTTAGGGTTA+GGG - chr3_3:49360829-49360848 None:intergenic 35.0%
GGAATTGGGAAGAAATGTTA+GGG - chr3_3:49360841-49360860 None:intergenic 35.0%
! TATTGTTGTTGTGAGGGAAA+GGG - chr3_3:49360910-49360929 None:intergenic 35.0%
! TTATTGTTGTTGTGAGGGAA+AGG - chr3_3:49360911-49360930 None:intergenic 35.0%
! GGTAGTTATTGTTGTTGTGA+GGG - chr3_3:49360916-49360935 None:intergenic 35.0%
!!! AATTGGTCTGGTTTTGTTGA+TGG - chr3_3:49360994-49361013 None:intergenic 35.0%
GTTGAATTGGAAAATTGGTC+TGG - chr3_3:49361006-49361025 None:intergenic 35.0%
! ACGGTGTTGAATTGGAAAAT+TGG - chr3_3:49361011-49361030 None:intergenic 35.0%
! GAAATTGAACGGTGTTGAAT+TGG - chr3_3:49361019-49361038 None:intergenic 35.0%
GTGTAGGGAATGAAATTGAA+CGG - chr3_3:49361030-49361049 None:intergenic 35.0%
TGATCATGTTGTGTATGATG+TGG + chr3_3:49361294-49361313 Msa0456080:CDS 35.0%
TTGTGTATGATGTGGATGTT+AGG + chr3_3:49361302-49361321 Msa0456080:CDS 35.0%
TCCGATCCATATTTCGTAAT+CGG - chr3_3:49361364-49361383 None:intergenic 35.0%
! TTTGTTATGGGTTGAAACAG+GGG + chr3_3:49361431-49361450 Msa0456080:CDS 35.0%
CTGTTAGATCTTTGCTTAGA+GGG + chr3_3:49361482-49361501 Msa0456080:CDS 35.0%
! TTATGAATGTTTGCTCTAGG+TGG + chr3_3:49361829-49361848 Msa0456080:intron 35.0%
! CACATGATAGATTTTTCCTC+TGG + chr3_3:49362108-49362127 Msa0456080:intron 35.0%
CAATTTGATCGCATTAGAGT+TGG - chr3_3:49362295-49362314 None:intergenic 35.0%
TTGAACATCCTCAAATTTGC+TGG + chr3_3:49362650-49362669 Msa0456080:CDS 35.0%
GTTGGACAATTACTTGTTTG+TGG - chr3_3:49362681-49362700 None:intergenic 35.0%
AGAATTGACACCACAAAAGT+TGG + chr3_3:49362828-49362847 Msa0456080:CDS 35.0%
! TTCACCATTTCCAACTTTTG+TGG - chr3_3:49362841-49362860 None:intergenic 35.0%
AACTTGTAGGAACACATGAT+GGG + chr3_3:49362919-49362938 Msa0456080:CDS 35.0%
CACTAGAAAGATAACAATGG+AGG + chr3_3:49363245-49363264 Msa0456080:intron 35.0%
GACTTAATGGCAGAAAAACT+AGG + chr3_3:49363288-49363307 Msa0456080:intron 35.0%
TAATGGCAGAAAAACTAGGA+AGG + chr3_3:49363292-49363311 Msa0456080:intron 35.0%
GTGGGAAACAAATATGAATC+TGG + chr3_3:49363321-49363340 Msa0456080:intron 35.0%
CAGGATATAAGCATGCATAA+GGG - chr3_3:49363501-49363520 None:intergenic 35.0%
ACAGGATATAAGCATGCATA+AGG - chr3_3:49363502-49363521 None:intergenic 35.0%
GTGATAAGGACAATATGATC+AGG - chr3_3:49363692-49363711 None:intergenic 35.0%
AACAAGTATCACGAGAATAG+TGG - chr3_3:49363942-49363961 None:intergenic 35.0%
TCCATGTTTCAGTATTGCTT+GGG - chr3_3:49364050-49364069 None:intergenic 35.0%
TTCCATGTTTCAGTATTGCT+TGG - chr3_3:49364051-49364070 None:intergenic 35.0%
AAGAATGCATCCTTAAGAGA+CGG - chr3_3:49364111-49364130 None:intergenic 35.0%
AGCATATATAGCATTCCTCT+GGG - chr3_3:49364184-49364203 None:intergenic 35.0%
!! ATAATCCATGCGAGTTGATT+CGG - chr3_3:49364232-49364251 None:intergenic 35.0%
AGTAAAACTAAGAATGGGCA+TGG - chr3_3:49364274-49364293 None:intergenic 35.0%
!!! ATGCCCATTCTTAGTTTTAC+TGG + chr3_3:49364273-49364292 Msa0456080:CDS 35.0%
! ACAAGTGATATTTTGCCTCA+TGG + chr3_3:49364297-49364316 Msa0456080:CDS 35.0%
! CAAGTGATATTTTGCCTCAT+GGG + chr3_3:49364298-49364317 Msa0456080:CDS 35.0%
! AAGTGATATTTTGCCTCATG+GGG + chr3_3:49364299-49364318 Msa0456080:CDS 35.0%
!!! ATTGTTTTGGGAGTAGAACT+GGG - chr3_3:49364522-49364541 None:intergenic 35.0%
! CTTGCTTGCATCATTGTTTT+GGG - chr3_3:49364534-49364553 None:intergenic 35.0%
! ACTTGCTTGCATCATTGTTT+TGG - chr3_3:49364535-49364554 None:intergenic 35.0%
!! CTGCTGATTTGTCTAGAAAT+AGG - chr3_3:49364615-49364634 None:intergenic 35.0%
TGAAGCTAAAACTGTTACAC+TGG + chr3_3:49364644-49364663 Msa0456080:CDS 35.0%
ATATCAGCATCACTACTAGA+AGG - chr3_3:49364672-49364691 None:intergenic 35.0%
TGATCACTCAAGTTAGATTG+TGG - chr3_3:49364765-49364784 None:intergenic 35.0%
TCTAACTTGAGTGATCATGT+TGG + chr3_3:49364768-49364787 Msa0456080:CDS 35.0%
CTAACTTGAGTGATCATGTT+GGG + chr3_3:49364769-49364788 Msa0456080:CDS 35.0%
TAACTTGAGTGATCATGTTG+GGG + chr3_3:49364770-49364789 Msa0456080:CDS 35.0%
GACAAATGGATACAATTCAC+AGG + chr3_3:49364823-49364842 Msa0456080:CDS 35.0%
GGTTGCTTAAAAATGACAGA+AGG - chr3_3:49364930-49364949 None:intergenic 35.0%
! TTTTAAGCAACCAACTCATC+TGG + chr3_3:49364938-49364957 Msa0456080:CDS 35.0%
TACCACTTTCACTTCTACTT+CGG - chr3_3:49365072-49365091 None:intergenic 35.0%
TTTCTTTGCCATCAGAAACT+GGG - chr3_3:49365151-49365170 None:intergenic 35.0%
! TTTTCTTTGCCATCAGAAAC+TGG - chr3_3:49365152-49365171 None:intergenic 35.0%
! GAAAAGTTGATTCTACTGGA+GGG + chr3_3:49365264-49365283 Msa0456080:CDS 35.0%
! AAAAGTTGATTCTACTGGAG+GGG + chr3_3:49365265-49365284 Msa0456080:CDS 35.0%
! ACCTTTTCATGGACATCTTT+TGG - chr3_3:49365341-49365360 None:intergenic 35.0%
TACCATTGATGTAGATGAGT+CGG - chr3_3:49365366-49365385 None:intergenic 35.0%
TTTGTATTAGATGCAGGTGA+TGG - chr3_3:49365395-49365414 None:intergenic 35.0%
TCACCTGCATCTAATACAAA+AGG + chr3_3:49365395-49365414 Msa0456080:CDS 35.0%
CACCTGCATCTAATACAAAA+GGG + chr3_3:49365396-49365415 Msa0456080:CDS 35.0%
! TTCCCTTTTGTATTAGATGC+AGG - chr3_3:49365401-49365420 None:intergenic 35.0%
TACAAAAGGGAAGAGACAAA+AGG + chr3_3:49365409-49365428 Msa0456080:CDS 35.0%
ACAAAAGGGAAGAGACAAAA+GGG + chr3_3:49365410-49365429 Msa0456080:CDS 35.0%
! ATTTGGTTCATTGGACGAAT+CGG - chr3_3:49365492-49365511 None:intergenic 35.0%
!!! GGATTGCTATTTTCAGTACA+TGG - chr3_3:49365530-49365549 None:intergenic 35.0%
AATGCAAGATTCACTCAATC+AGG + chr3_3:49365562-49365581 Msa0456080:CDS 35.0%
TTCCCATCGATGTATTCTTA+AGG + chr3_3:49365755-49365774 Msa0456080:intron 35.0%
GTCCTTAAGAATACATCGAT+GGG - chr3_3:49365760-49365779 None:intergenic 35.0%
AGTCCTTAAGAATACATCGA+TGG - chr3_3:49365761-49365780 None:intergenic 35.0%
CGTTTAAAGAGAAAAATGGG+AGG - chr3_3:49365803-49365822 None:intergenic 35.0%
GCAGTTATTGACAATGCAAA+AGG + chr3_3:49366053-49366072 Msa0456080:intron 35.0%
GCAGAAACAAATGACAATGA+CGG + chr3_3:49366080-49366099 Msa0456080:CDS 35.0%
AACAGTTCCAGTTACAAAAG+AGG + chr3_3:49366104-49366123 Msa0456080:CDS 35.0%
ACAGTTCCAGTTACAAAAGA+GGG + chr3_3:49366105-49366124 Msa0456080:CDS 35.0%
AACCTGTAACATGTTGGAAA+CGG - chr3_3:49366248-49366267 None:intergenic 35.0%
GATTACCAACTTCATGAACA+AGG + chr3_3:49366269-49366288 Msa0456080:CDS 35.0%
TAGATCCTTGTTCATGAAGT+TGG - chr3_3:49366277-49366296 None:intergenic 35.0%
AGATAATGTACAAACCTGGA+AGG - chr3_3:49366412-49366431 None:intergenic 35.0%
ATACAATGATGTTGTCTTGC+TGG + chr3_3:49366496-49366515 Msa0456080:intron 35.0%
TACAATGATGTTGTCTTGCT+GGG + chr3_3:49366497-49366516 Msa0456080:intron 35.0%
TTTATGCAATAGAGAGGAGT+GGG + chr3_3:49366533-49366552 Msa0456080:intron 35.0%
!! TTGCTATTTGTGATTTCACG+AGG + chr3_3:49366733-49366752 Msa0456080:intron 35.0%
! AGAATCAACTTGCTCAAACA+TGG - chr3_3:49366858-49366877 None:intergenic 35.0%
! GTTGATTCTACATTCCAGAA+AGG + chr3_3:49366869-49366888 Msa0456080:CDS 35.0%
ACAGAGTATGCTTGTTCATT+TGG + chr3_3:49366972-49366991 Msa0456080:intron 35.0%
CAGAGTATGCTTGTTCATTT+GGG + chr3_3:49366973-49366992 Msa0456080:intron 35.0%
AGAGTATGCTTGTTCATTTG+GGG + chr3_3:49366974-49366993 Msa0456080:intron 35.0%
! AGTAATTTGAGACATTTGGC+AGG - chr3_3:49367179-49367198 None:intergenic 35.0%
ATGTCTCAAATTACTTGCAG+GGG + chr3_3:49367184-49367203 Msa0456080:intron 35.0%
AGTAGAGAGACAGAAAACAT+GGG - chr3_3:49367243-49367262 None:intergenic 35.0%
CTACAGTGAAAGAGAAAACA+TGG + chr3_3:49367275-49367294 Msa0456080:intron 35.0%
ACAGTGAAAGAGAAAACATG+GGG + chr3_3:49367277-49367296 Msa0456080:intron 35.0%
GGGTATCACATATTGGAAAT+GGG - chr3_3:49367498-49367517 None:intergenic 35.0%
TGGGTATCACATATTGGAAA+TGG - chr3_3:49367499-49367518 None:intergenic 35.0%
!! TTATTGGCTCAAATCAAGGT+GGG - chr3_3:49367518-49367537 None:intergenic 35.0%
!! ATTATTGGCTCAAATCAAGG+TGG - chr3_3:49367519-49367538 None:intergenic 35.0%
! CTAGATAAAGCTTTTGGACA+TGG + chr3_3:49367800-49367819 Msa0456080:intron 35.0%
TTGGACATGGTACTCTTATA+TGG + chr3_3:49367813-49367832 Msa0456080:intron 35.0%
!!! TTCTTCGTGATGTTTTTTGC+AGG + chr3_3:49367868-49367887 Msa0456080:intron 35.0%
! CCTACCTTTTCATGAAGTAA+AGG - chr3_3:49368034-49368053 None:intergenic 35.0%
CCTTTACTTCATGAAAAGGT+AGG + chr3_3:49368031-49368050 Msa0456080:intron 35.0%
! TTGTTATGCATATCAGGTTG+AGG + chr3_3:49368149-49368168 Msa0456080:intron 35.0%
! AAGGGTTTTTAATGTAGCAG+AGG + chr3_3:49368401-49368420 Msa0456080:intron 35.0%
! AGGGTTTTTAATGTAGCAGA+GGG + chr3_3:49368402-49368421 Msa0456080:intron 35.0%
!! GAGATGAGGGATTTTAATGT+AGG + chr3_3:49368456-49368475 Msa0456080:intron 35.0%
ATTGTTATCATGGGATCTGA+GGG - chr3_3:49368759-49368778 None:intergenic 35.0%
! TGATAGACTTGCTCAAAGAT+GGG - chr3_3:49368792-49368811 None:intergenic 35.0%
GATGACATGCAATAAAAGAC+GGG - chr3_3:49368871-49368890 None:intergenic 35.0%
GTACAAAGTTGTGAGTTTCA+TGG + chr3_3:49368977-49368996 Msa0456080:three_prime_UTR 35.0%
AAGTTGTGAGTTTCATGGAT+AGG + chr3_3:49368982-49369001 Msa0456080:three_prime_UTR 35.0%
AGTTGTGAGTTTCATGGATA+GGG + chr3_3:49368983-49369002 Msa0456080:three_prime_UTR 35.0%
CTCAATTTAGACACTGTATC+TGG + chr3_3:49369062-49369081 Msa0456080:three_prime_UTR 35.0%
TGTTGACGATTAGGATAAAC+TGG + chr3_3:49369115-49369134 Msa0456080:three_prime_UTR 35.0%
TTAACAACGGTTGCAACTAT+TGG + chr3_3:49369157-49369176 Msa0456080:three_prime_UTR 35.0%
GGAATTTCAAGACAGTCACT+TGG - chr3_3:49360552-49360571 None:intergenic 40.0%
GTGTGAGATCTATCTGATTG+AGG - chr3_3:49360601-49360620 None:intergenic 40.0%
! GAAAGTGTGCATATCGAAAG+GGG - chr3_3:49360786-49360805 None:intergenic 40.0%
GAAATGTTAGGGTTAGGGTT+AGG - chr3_3:49360830-49360849 None:intergenic 40.0%
GGGAAGAAATGTTAGGGTTA+GGG - chr3_3:49360835-49360854 None:intergenic 40.0%
TGGGAAGAAATGTTAGGGTT+AGG - chr3_3:49360836-49360855 None:intergenic 40.0%
GGGAATTGGGAAGAAATGTT+AGG - chr3_3:49360842-49360861 None:intergenic 40.0%
! GGGTAGTTATTGTTGTTGTG+AGG - chr3_3:49360917-49360936 None:intergenic 40.0%
! TTGTTGTTGTTGGATTGGAG+GGG - chr3_3:49361140-49361159 None:intergenic 40.0%
! GTTGTTGTTGTTGGATTGGA+GGG - chr3_3:49361141-49361160 None:intergenic 40.0%
! TGTTGTTGTTGTTGGATTGG+AGG - chr3_3:49361142-49361161 None:intergenic 40.0%
! GGTTGTTGTTGTTGTTGGAT+TGG - chr3_3:49361145-49361164 None:intergenic 40.0%
CCAATCAAATGCCTTCCTTT+CGG - chr3_3:49361274-49361293 None:intergenic 40.0%
GCCGATTACGAAATATGGAT+CGG + chr3_3:49361360-49361379 Msa0456080:CDS 40.0%
ATATGGATCGGATCCTAATC+CGG + chr3_3:49361372-49361391 Msa0456080:CDS 40.0%
GTTGAAACAGGGGAATATCA+GGG + chr3_3:49361441-49361460 Msa0456080:CDS 40.0%
GCTGTTAGATCTTTGCTTAG+AGG + chr3_3:49361481-49361500 Msa0456080:CDS 40.0%
AAGAAGCAAAGAAATGCCAG+AGG - chr3_3:49362127-49362146 None:intergenic 40.0%
TCTGGCATTTCTTTGCTTCT+TGG + chr3_3:49362126-49362145 Msa0456080:intron 40.0%
!! TGGCCTTGTTTGTTTGTCTA+TGG + chr3_3:49362473-49362492 Msa0456080:intron 40.0%
!!! TTTTACAGTGTTGGCACAGA+TGG + chr3_3:49362523-49362542 Msa0456080:intron 40.0%
! GTGGAAAATTTCTGAAGGTC+CGG + chr3_3:49362558-49362577 Msa0456080:CDS 40.0%
TGAGGCTTATCTTCATCATC+CGG - chr3_3:49362580-49362599 None:intergenic 40.0%
GACACCACAAAAGTTGGAAA+TGG + chr3_3:49362834-49362853 Msa0456080:CDS 40.0%
! TTGTCAAGAGGACATTTTGG+AGG - chr3_3:49362882-49362901 None:intergenic 40.0%
! AGCTTGTCAAGAGGACATTT+TGG - chr3_3:49362885-49362904 None:intergenic 40.0%
CTCTTGACAAGCTCATTGAT+GGG + chr3_3:49362892-49362911 Msa0456080:CDS 40.0%
TCTTGACAAGCTCATTGATG+GGG + chr3_3:49362893-49362912 Msa0456080:CDS 40.0%
ATTGATGGGGTTCAACTTGT+AGG + chr3_3:49362906-49362925 Msa0456080:CDS 40.0%
CAACTTGTAGGAACACATGA+TGG + chr3_3:49362918-49362937 Msa0456080:CDS 40.0%
ACTTGTAGGAACACATGATG+GGG + chr3_3:49362920-49362939 Msa0456080:CDS 40.0%
! CTGATTTGTCAATGTGCCAA+TGG + chr3_3:49362949-49362968 Msa0456080:CDS 40.0%
!! CCAATCGATTTGTCATCCAT+TGG - chr3_3:49362968-49362987 None:intergenic 40.0%
CCAATGGATGACAAATCGAT+TGG + chr3_3:49362965-49362984 Msa0456080:CDS 40.0%
AAAACTAGGAAGGACAAGAG+TGG + chr3_3:49363302-49363321 Msa0456080:intron 40.0%
AAACTAGGAAGGACAAGAGT+GGG + chr3_3:49363303-49363322 Msa0456080:intron 40.0%
TAGAAAGGACAAGGTTCTGT+TGG - chr3_3:49363373-49363392 None:intergenic 40.0%
AGAAGACAAACGTGATTAGG+AGG - chr3_3:49363550-49363569 None:intergenic 40.0%
TAAGGACAATATGATCAGGC+TGG - chr3_3:49363688-49363707 None:intergenic 40.0%
ACACACTTACTGCTGTGATA+AGG - chr3_3:49363706-49363725 None:intergenic 40.0%
! TTTTTATAATGCAGCAGGCC+AGG + chr3_3:49363733-49363752 Msa0456080:intron 40.0%
GAAAGACAAATTCAGAGACC+TGG - chr3_3:49363754-49363773 None:intergenic 40.0%
TCCCAAGCAATACTGAAACA+TGG + chr3_3:49364046-49364065 Msa0456080:CDS 40.0%
ATGGAAATGCACTCAGACTT+TGG + chr3_3:49364065-49364084 Msa0456080:CDS 40.0%
! TTTTACTTGCAAATGCCCAG+AGG + chr3_3:49364166-49364185 Msa0456080:CDS 40.0%
CAGCATATATAGCATTCCTC+TGG - chr3_3:49364185-49364204 None:intergenic 40.0%
TGCTATATATGCTGTGCACT+TGG + chr3_3:49364191-49364210 Msa0456080:CDS 40.0%
TATGCTGTGCACTTGGAATA+TGG + chr3_3:49364198-49364217 Msa0456080:CDS 40.0%
!! TAATCCATGCGAGTTGATTC+GGG - chr3_3:49364231-49364250 None:intergenic 40.0%
TGAACAATATGTTCCCCATG+AGG - chr3_3:49364315-49364334 None:intergenic 40.0%
TCATGGGGAACATATTGTTC+AGG + chr3_3:49364314-49364333 Msa0456080:CDS 40.0%
GGTTTATTGTGTTCAGACAC+TGG + chr3_3:49364335-49364354 Msa0456080:CDS 40.0%
! TCAGCAGTATGCTTTGGATT+TGG + chr3_3:49364362-49364381 Msa0456080:CDS 40.0%
! TCTAGTCCCGCATTTTCTAA+TGG - chr3_3:49364405-49364424 None:intergenic 40.0%
AATTGCATCTCGTGAAACAC+TGG - chr3_3:49364439-49364458 None:intergenic 40.0%
!!! CATTGTTTTGGGAGTAGAAC+TGG - chr3_3:49364523-49364542 None:intergenic 40.0%
TCAAGATACCCTTTAAGCTC+AGG + chr3_3:49364576-49364595 Msa0456080:CDS 40.0%
CAGTATGACCTGAGCTTAAA+GGG - chr3_3:49364587-49364606 None:intergenic 40.0%
TCAGTATGACCTGAGCTTAA+AGG - chr3_3:49364588-49364607 None:intergenic 40.0%
!! CTGGCTTTTGTAATCTCAGA+TGG - chr3_3:49364969-49364988 None:intergenic 40.0%
!! TTCCTCCTCTGAGACTAATA+TGG + chr3_3:49364989-49365008 Msa0456080:CDS 40.0%
TGAGGTAGAAACAAAGATCC+AGG + chr3_3:49365025-49365044 Msa0456080:CDS 40.0%
AGAAACAAAGATCCAGGATG+TGG + chr3_3:49365031-49365050 Msa0456080:CDS 40.0%
GAAGTAGAAGTGAAAGTGGT+AGG + chr3_3:49365071-49365090 Msa0456080:CDS 40.0%
AAATGATGAACTTGGCAAGC+AGG + chr3_3:49365112-49365131 Msa0456080:CDS 40.0%
AATGATGAACTTGGCAAGCA+GGG + chr3_3:49365113-49365132 Msa0456080:CDS 40.0%
!!! TCAGAAACTGGGTTTTGTTG+TGG - chr3_3:49365140-49365159 None:intergenic 40.0%
CAACAAAACCCAGTTTCTGA+TGG + chr3_3:49365140-49365159 Msa0456080:CDS 40.0%
! TTCTGATCTTGGCATTGAGA+TGG + chr3_3:49365190-49365209 Msa0456080:CDS 40.0%
ACTTACATTACAGAGGAACC+TGG + chr3_3:49365242-49365261 Msa0456080:CDS 40.0%
! CCAGTAGAATCAACTTTTCC+AGG - chr3_3:49365263-49365282 None:intergenic 40.0%
! CCTGGAAAAGTTGATTCTAC+TGG + chr3_3:49365260-49365279 Msa0456080:CDS 40.0%
! GGAAAAGTTGATTCTACTGG+AGG + chr3_3:49365263-49365282 Msa0456080:CDS 40.0%
GCCAAAAGATGTCCATGAAA+AGG + chr3_3:49365337-49365356 Msa0456080:CDS 40.0%
! ATGAGTCGGAAACCTTTTCA+TGG - chr3_3:49365352-49365371 None:intergenic 40.0%
TTCCGACTCATCTACATCAA+TGG + chr3_3:49365361-49365380 Msa0456080:CDS 40.0%
GATTCGTCCAATGAACCAAA+TGG + chr3_3:49365491-49365510 Msa0456080:CDS 40.0%
! GGGAGGTTTGAAATTCCATT+TGG - chr3_3:49365509-49365528 None:intergenic 40.0%
!!! TGCTATTTTCAGTACATGGG+AGG - chr3_3:49365526-49365545 None:intergenic 40.0%
ACTCAATCAGGTGATTACTC+AGG + chr3_3:49365574-49365593 Msa0456080:intron 40.0%
! CTTCTACCCTCTTTTGTAAC+TGG - chr3_3:49366114-49366133 None:intergenic 40.0%
CAGTTACAAAAGAGGGTAGA+AGG + chr3_3:49366112-49366131 Msa0456080:CDS 40.0%
! TTTTTCCATGCTTCTCCCTA+GGG - chr3_3:49366148-49366167 None:intergenic 40.0%
!! TTTGTGGGCTAGAATTCAAG+AGG + chr3_3:49366191-49366210 Msa0456080:CDS 40.0%
TTGTCTTGCTGGGATCTAAT+TGG + chr3_3:49366507-49366526 Msa0456080:intron 40.0%
TGGCACTTTATGCAATAGAG+AGG + chr3_3:49366527-49366546 Msa0456080:intron 40.0%
CTTTATGCAATAGAGAGGAG+TGG + chr3_3:49366532-49366551 Msa0456080:intron 40.0%
GTTTCAGACAACTGTCAAAC+AGG + chr3_3:49366634-49366653 Msa0456080:CDS 40.0%
!!! ATCCAGTTTTGAAACGACAG+TGG + chr3_3:49366805-49366824 Msa0456080:CDS 40.0%
TTCTACATTCCAGAAAGGCA+TGG + chr3_3:49366874-49366893 Msa0456080:CDS 40.0%
TTCGTTGGCAATGACTCTAA+GGG + chr3_3:49366943-49366962 Msa0456080:CDS 40.0%
!!! TTTTGGCTTAATGTGGGCTA+GGG + chr3_3:49367112-49367131 Msa0456080:intron 40.0%
CAAATTACTTGCAGGGGATT+TGG + chr3_3:49367190-49367209 Msa0456080:intron 40.0%
GAGTAGAGAGACAGAAAACA+TGG - chr3_3:49367244-49367263 None:intergenic 40.0%
CTGTCTCTCTACTCTATGTA+TGG + chr3_3:49367250-49367269 Msa0456080:intron 40.0%
TATCCTCCTTGGAACAATAG+TGG + chr3_3:49367303-49367322 Msa0456080:intron 40.0%
TCAGATCCACTATTGTTCCA+AGG - chr3_3:49367312-49367331 None:intergenic 40.0%
!! ATAGTGGATCTGAATCCACT+CGG + chr3_3:49367319-49367338 Msa0456080:intron 40.0%
TATTCCACAAGAGTAATGCC+AGG + chr3_3:49367392-49367411 Msa0456080:intron 40.0%
ATTCCACAAGAGTAATGCCA+GGG + chr3_3:49367393-49367412 Msa0456080:intron 40.0%
!! ATATGTCCCACCACTTTTAG+TGG + chr3_3:49367470-49367489 Msa0456080:intron 40.0%
! GAAATGGGTTCCACTAAAAG+TGG - chr3_3:49367483-49367502 None:intergenic 40.0%
TCAAGGTGGGTATCACATAT+TGG - chr3_3:49367505-49367524 None:intergenic 40.0%
ACATTGAGATACGGAGACAT+TGG - chr3_3:49367843-49367862 None:intergenic 40.0%
ATGTCTCCGTATCTCAATGT+TGG + chr3_3:49367843-49367862 Msa0456080:intron 40.0%
CGGTCCTTTACTTCATGAAA+AGG + chr3_3:49368027-49368046 Msa0456080:CDS 40.0%
TCATGAAAAGGTAGGGAACT+TGG + chr3_3:49368039-49368058 Msa0456080:intron 40.0%
GAACTTGGCTAACTACTTGT+TGG + chr3_3:49368054-49368073 Msa0456080:intron 40.0%
!! TGTTGGTCTTTGTTGTCGAT+AGG + chr3_3:49368071-49368090 Msa0456080:intron 40.0%
! TAGCAAGGTTGATTTCTGAG+CGG + chr3_3:49368196-49368215 Msa0456080:CDS 40.0%
GATTTCTGAGCGGAAATATG+AGG + chr3_3:49368206-49368225 Msa0456080:CDS 40.0%
TGTATCTTGGTTATGCTCTC+AGG + chr3_3:49368269-49368288 Msa0456080:CDS 40.0%
! GGTGTGTTTGGTTCAAACAA+GGG + chr3_3:49368378-49368397 Msa0456080:intron 40.0%
! TGTTTGGTTCAAACAAGGGA+AGG + chr3_3:49368382-49368401 Msa0456080:intron 40.0%
! GTTTGGTTCAAACAAGGGAA+GGG + chr3_3:49368383-49368402 Msa0456080:intron 40.0%
! GGGTTTTTAATGTAGCAGAG+GGG + chr3_3:49368403-49368422 Msa0456080:intron 40.0%
TTTAATGTAGCAGAGGGGTA+AGG + chr3_3:49368408-49368427 Msa0456080:intron 40.0%
CATTGTTATCATGGGATCTG+AGG - chr3_3:49368760-49368779 None:intergenic 40.0%
! CTGATAGACTTGCTCAAAGA+TGG - chr3_3:49368793-49368812 None:intergenic 40.0%
TAGAAGGCAAGTTACGTTGA+TGG - chr3_3:49368824-49368843 None:intergenic 40.0%
AGATCAGATCCAGTGATAGA+AGG - chr3_3:49368840-49368859 None:intergenic 40.0%
TCATTTACATGTCGTCAGCA+TGG - chr3_3:49368898-49368917 None:intergenic 40.0%
TTCATGGATAGGGTCGAAAT+CGG + chr3_3:49368993-49369012 Msa0456080:three_prime_UTR 40.0%
GTTGACGCATGTCAAAAGTA+AGG - chr3_3:49369094-49369113 None:intergenic 40.0%
TGACGATTAGGATAAACTGG+AGG + chr3_3:49369118-49369137 Msa0456080:three_prime_UTR 40.0%
TCAAGACAGTCACTTGGAAG+CGG - chr3_3:49360546-49360565 None:intergenic 45.0%
AGGAAGAAGGTGAAGTGATG+CGG - chr3_3:49360581-49360600 None:intergenic 45.0%
ATATCGAAAGGGGTTGGAGA+AGG - chr3_3:49360776-49360795 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTT+GGG - chr3_3:49360817-49360836 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+TGG - chr3_3:49360818-49360837 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTA+GGG - chr3_3:49360823-49360842 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+AGG - chr3_3:49360818-49360837 None:intergenic 45.0%
TAAGAGGAGGATGAAGAAGG+TGG - chr3_3:49360887-49360906 None:intergenic 45.0%
TTGTTGAGGTGGTTGTAGAG+GGG - chr3_3:49361053-49361072 None:intergenic 45.0%
GTTGTTGAGGTGGTTGTAGA+GGG - chr3_3:49361054-49361073 None:intergenic 45.0%
ATTGGTTGAGGTTGTTGAGG+TGG - chr3_3:49361064-49361083 None:intergenic 45.0%
CGTTAGGATTTGAAGGAGGT+GGG - chr3_3:49361087-49361106 None:intergenic 45.0%
! GTGGTGGTTGTTGTTGTTGT+TGG - chr3_3:49361150-49361169 None:intergenic 45.0%
TTAACAGCACCAGAGGAGAT+GGG - chr3_3:49361187-49361206 None:intergenic 45.0%
ATTAACAGCACCAGAGGAGA+TGG - chr3_3:49361188-49361207 None:intergenic 45.0%
!! CCGAAAGGAAGGCATTTGAT+TGG + chr3_3:49361271-49361290 Msa0456080:CDS 45.0%
!! GTTGCGCCGATTACGAAATA+TGG + chr3_3:49361355-49361374 Msa0456080:CDS 45.0%
! ATCGGATCCTAATCCGGTTT+TGG + chr3_3:49361378-49361397 Msa0456080:CDS 45.0%
! TCGGATCCTAATCCGGTTTT+GGG + chr3_3:49361379-49361398 Msa0456080:CDS 45.0%
GGTTGAAACAGGGGAATATC+AGG + chr3_3:49361440-49361459 Msa0456080:CDS 45.0%
AGCCAGGAGATGAACATCTT+CGG - chr3_3:49362423-49362442 None:intergenic 45.0%
AAGATGTTCATCTCCTGGCT+AGG + chr3_3:49362423-49362442 Msa0456080:CDS 45.0%
TGCTGTTCAAATAGTCGGAG+AGG + chr3_3:49362621-49362640 Msa0456080:CDS 45.0%
TGGAAATGGTGAAGCCTTTG+TGG + chr3_3:49362848-49362867 Msa0456080:CDS 45.0%
CCATCAATGAGCTTGTCAAG+AGG - chr3_3:49362894-49362913 None:intergenic 45.0%
CCTCTTGACAAGCTCATTGA+TGG + chr3_3:49362891-49362910 Msa0456080:CDS 45.0%
TCGATTGGTATCAGCATCAC+AGG + chr3_3:49362980-49362999 Msa0456080:CDS 45.0%
TTGGTATCAGCATCACAGGA+TGG + chr3_3:49362984-49363003 Msa0456080:CDS 45.0%
CTGTGTTCAGACCTCATGAT+GGG + chr3_3:49363624-49363643 Msa0456080:CDS 45.0%
AAAACAGGATGCCCATCATG+AGG - chr3_3:49363638-49363657 None:intergenic 45.0%
ACAATATGATCAGGCTGGTG+TGG - chr3_3:49363683-49363702 None:intergenic 45.0%
!! AATTGCACTACGCTGACTTC+AGG - chr3_3:49363776-49363795 None:intergenic 45.0%
GTATCACGAGAATAGTGGCA+TGG - chr3_3:49363937-49363956 None:intergenic 45.0%
CCTTGAAGGGACCACAAAAT+CGG + chr3_3:49363980-49363999 Msa0456080:intron 45.0%
CTTGAAGGGACCACAAAATC+GGG + chr3_3:49363981-49364000 Msa0456080:intron 45.0%
! AGCTTCACTTCCCGATTTTG+TGG - chr3_3:49363994-49364013 None:intergenic 45.0%
AAAATCGGGAAGTGAAGCTC+TGG + chr3_3:49363995-49364014 Msa0456080:CDS 45.0%
AAATCGGGAAGTGAAGCTCT+GGG + chr3_3:49363996-49364015 Msa0456080:CDS 45.0%
TCTCAGCTAGTGAAGAAGGT+TGG + chr3_3:49364019-49364038 Msa0456080:CDS 45.0%
TTCAGCTAAGCCGTCTCTTA+AGG + chr3_3:49364098-49364117 Msa0456080:CDS 45.0%
AGTAAAAGCAGACCTGCATG+AGG - chr3_3:49364153-49364172 None:intergenic 45.0%
!! ATGCGAGTTGATTCGGGATT+AGG - chr3_3:49364225-49364244 None:intergenic 45.0%
TAATCCCGAATCAACTCGCA+TGG + chr3_3:49364224-49364243 Msa0456080:CDS 45.0%
GGCTATTCAGCAGTATGCTT+TGG + chr3_3:49364356-49364375 Msa0456080:CDS 45.0%
GCCTCCACCATTAGAAAATG+CGG + chr3_3:49364395-49364414 Msa0456080:CDS 45.0%
CCTCCACCATTAGAAAATGC+GGG + chr3_3:49364396-49364415 Msa0456080:CDS 45.0%
! AGTCCCGCATTTTCTAATGG+TGG - chr3_3:49364402-49364421 None:intergenic 45.0%
CGAGATGCAATTACTGCTGA+AGG + chr3_3:49364447-49364466 Msa0456080:CDS 45.0%
AAAGCTTCCTGGACAACCTT+GGG - chr3_3:49364728-49364747 None:intergenic 45.0%
CCTGAAATCAGAAAGCTTCC+TGG - chr3_3:49364739-49364758 None:intergenic 45.0%
CCAGGAAGCTTTCTGATTTC+AGG + chr3_3:49364736-49364755 Msa0456080:CDS 45.0%
GATGGTGTAACCAGATGAGT+TGG - chr3_3:49364951-49364970 None:intergenic 45.0%
! ATTAGTCTCAGAGGAGGAAC+TGG - chr3_3:49364988-49365007 None:intergenic 45.0%
! GACCATATTAGTCTCAGAGG+AGG - chr3_3:49364994-49365013 None:intergenic 45.0%
! GTCGACCATATTAGTCTCAG+AGG - chr3_3:49364997-49365016 None:intergenic 45.0%
! ATCCAGGATGTGGTTGATGT+GGG + chr3_3:49365041-49365060 Msa0456080:CDS 45.0%
TGCCGAAGTAGAAGTGAAAG+TGG + chr3_3:49365067-49365086 Msa0456080:CDS 45.0%
TGAAAGTGGTAGGTGAAGCA+AGG + chr3_3:49365081-49365100 Msa0456080:CDS 45.0%
ATGATGAACTTGGCAAGCAG+GGG + chr3_3:49365114-49365133 Msa0456080:CDS 45.0%
TGGGGAGACTTACATTACAG+AGG + chr3_3:49365235-49365254 Msa0456080:CDS 45.0%
! GTATTAGATGCAGGTGATGG+TGG - chr3_3:49365392-49365411 None:intergenic 45.0%
GGTAAGAACTCTCAACCATC+AGG + chr3_3:49365431-49365450 Msa0456080:CDS 45.0%
AATTGCATGCACTAGGAGAC+GGG - chr3_3:49365466-49365485 None:intergenic 45.0%
GAATTGCATGCACTAGGAGA+CGG - chr3_3:49365467-49365486 None:intergenic 45.0%
TCGGTTGAATTGCATGCACT+AGG - chr3_3:49365473-49365492 None:intergenic 45.0%
TCTTGCATTGCCGCAATTTG+AGG - chr3_3:49365551-49365570 None:intergenic 45.0%
AAAAGAGGGTAGAAGGCTTG+AGG + chr3_3:49366119-49366138 Msa0456080:CDS 45.0%
! CTTTTTCCATGCTTCTCCCT+AGG - chr3_3:49366149-49366168 None:intergenic 45.0%
AGTCCAATGCTGATGCTTTG+TGG + chr3_3:49366175-49366194 Msa0456080:CDS 45.0%
GTCCAATGCTGATGCTTTGT+GGG + chr3_3:49366176-49366195 Msa0456080:CDS 45.0%
GACCGTTTCCAACATGTTAC+AGG + chr3_3:49366243-49366262 Msa0456080:CDS 45.0%
! ACAGTTTTCTCCAATGCTGC+TGG - chr3_3:49366300-49366319 None:intergenic 45.0%
! CAGTTGTCTGAAACTGTGCT+TGG - chr3_3:49366628-49366647 None:intergenic 45.0%
AACTGTCAAACAGGCACTTC+AGG + chr3_3:49366643-49366662 Msa0456080:CDS 45.0%
! GACCACTGTCGTTTCAAAAC+TGG - chr3_3:49366810-49366829 None:intergenic 45.0%
TGCAGGACATCTCAAATGCA+GGG - chr3_3:49366832-49366851 None:intergenic 45.0%
TTGCAGGACATCTCAAATGC+AGG - chr3_3:49366833-49366852 None:intergenic 45.0%
! TTGCTCAAACATGGCTTTGC+AGG - chr3_3:49366849-49366868 None:intergenic 45.0%
AATGTTCAGCCATGCCTTTC+TGG - chr3_3:49366886-49366905 None:intergenic 45.0%
AGAGTCATTGCCAACGAAGT+AGG - chr3_3:49366941-49366960 None:intergenic 45.0%
CTTCGTTGGCAATGACTCTA+AGG + chr3_3:49366942-49366961 Msa0456080:CDS 45.0%
!!! GTTTTGGCTTAATGTGGGCT+AGG + chr3_3:49367111-49367130 Msa0456080:intron 45.0%
GTAACGAAGCTTCTCTGAAC+AGG - chr3_3:49367221-49367240 None:intergenic 45.0%
ACATGGGGATATATCCTCCT+TGG + chr3_3:49367292-49367311 Msa0456080:intron 45.0%
GATCCACTATTGTTCCAAGG+AGG - chr3_3:49367309-49367328 None:intergenic 45.0%
TGGGTTCCACTAAAAGTGGT+GGG - chr3_3:49367479-49367498 None:intergenic 45.0%
ATGGGTTCCACTAAAAGTGG+TGG - chr3_3:49367480-49367499 None:intergenic 45.0%
AATAGATGGTGAGAAGACCC+TGG - chr3_3:49367646-49367665 None:intergenic 45.0%
!! TTGAGTAGAGAAGTGCTCGA+GGG + chr3_3:49367926-49367945 Msa0456080:CDS 45.0%
GCAACCTCAAGAACAAACTC+TGG + chr3_3:49367971-49367990 Msa0456080:CDS 45.0%
! TGTGCCAGAGTTTGTTCTTG+AGG - chr3_3:49367978-49367997 None:intergenic 45.0%
AACCTTGCTAGCTCCTTTGT+GGG - chr3_3:49368186-49368205 None:intergenic 45.0%
TTCTGAGCGGAAATATGAGG+AGG + chr3_3:49368209-49368228 Msa0456080:CDS 45.0%
TACAGACATGTCTCTCCTGT+TGG + chr3_3:49368323-49368342 Msa0456080:intron 45.0%
! GGGTGTGTTTGGTTCAAACA+AGG + chr3_3:49368377-49368396 Msa0456080:intron 45.0%
TCACTTCATTTCTGCTGTGC+AGG + chr3_3:49368587-49368606 Msa0456080:intron 45.0%
!! GCTGTGCAGGTTGATTTACA+TGG + chr3_3:49368600-49368619 Msa0456080:intron 45.0%
AGCACTACACCTTGGCTTAA+GGG - chr3_3:49368648-49368667 None:intergenic 45.0%
AAGCACTACACCTTGGCTTA+AGG - chr3_3:49368649-49368668 None:intergenic 45.0%
!! GAAGTGAAAGCACTACACCT+TGG - chr3_3:49368656-49368675 None:intergenic 45.0%
CGCACGTGCATTGTTATCAT+GGG - chr3_3:49368768-49368787 None:intergenic 45.0%
TCGCACGTGCATTGTTATCA+TGG - chr3_3:49368769-49368788 None:intergenic 45.0%
! CGTAACTTGCCTTCTATCAC+TGG + chr3_3:49368828-49368847 Msa0456080:CDS 45.0%
!! GCGTCAACTTGTTGACGATT+AGG + chr3_3:49369106-49369125 Msa0456080:three_prime_UTR 45.0%
!!! TTTTTTATTTCTTTATATTA+AGG + chr3_3:49365882-49365901 Msa0456080:intron 5.0%
GGTGAAGTGATGCGGGATTT+CGG - chr3_3:49360573-49360592 None:intergenic 50.0%
GGAAGAAGGTGAAGTGATGC+GGG - chr3_3:49360580-49360599 None:intergenic 50.0%
! GGAGAAGGTGGTGGTTGATT+GGG - chr3_3:49360761-49360780 None:intergenic 50.0%
! TGGAGAAGGTGGTGGTTGAT+TGG - chr3_3:49360762-49360781 None:intergenic 50.0%
GTGTGCATATCGAAAGGGGT+TGG - chr3_3:49360782-49360801 None:intergenic 50.0%
AGGGTTAGGGTTAGGGTTTG+GGG - chr3_3:49360816-49360835 None:intergenic 50.0%
GGGTAAGAGGAGGATGAAGA+AGG - chr3_3:49360890-49360909 None:intergenic 50.0%
GTTGTGAGGGAAAGGGTAAG+AGG - chr3_3:49360903-49360922 None:intergenic 50.0%
!! GGTGATGGTGGTGATCGTAA+GGG - chr3_3:49360937-49360956 None:intergenic 50.0%
!! TGGTGATGGTGGTGATCGTA+AGG - chr3_3:49360938-49360957 None:intergenic 50.0%
TGTTGAGGTGGTTGTAGAGG+GGG - chr3_3:49361052-49361071 None:intergenic 50.0%
GGTTGTTGAGGTGGTTGTAG+AGG - chr3_3:49361055-49361074 None:intergenic 50.0%
!! GGGATTGGTTGAGGTTGTTG+AGG - chr3_3:49361067-49361086 None:intergenic 50.0%
GGATTTGAAGGAGGTGGGAT+TGG - chr3_3:49361082-49361101 None:intergenic 50.0%
GCGTTAGGATTTGAAGGAGG+TGG - chr3_3:49361088-49361107 None:intergenic 50.0%
CCTCCTTCAAATCCTAACGC+CGG + chr3_3:49361088-49361107 Msa0456080:CDS 50.0%
!! CTCCTCTGGTGCTGTTAATC+CGG + chr3_3:49361189-49361208 Msa0456080:CDS 50.0%
GATTAGGCTGCCGAGTAGTA+AGG + chr3_3:49361246-49361265 Msa0456080:CDS 50.0%
CCTTTCGGCACCTTACTACT+CGG - chr3_3:49361259-49361278 None:intergenic 50.0%
!! GTAGTAAGGTGCCGAAAGGA+AGG + chr3_3:49361260-49361279 Msa0456080:CDS 50.0%
! GATGTGGATGTTAGGTTGCC+TGG + chr3_3:49361310-49361329 Msa0456080:CDS 50.0%
TGTCGACCCAAAACCGGATT+AGG - chr3_3:49361388-49361407 None:intergenic 50.0%
GCAATCTGTCGACCCAAAAC+CGG - chr3_3:49361394-49361413 None:intergenic 50.0%
! TTTGCTTAGAGGGCACACTC+AGG + chr3_3:49361492-49361511 Msa0456080:CDS 50.0%
! TTAGAGGGCACACTCAGGTT+TGG + chr3_3:49361497-49361516 Msa0456080:intron 50.0%
TTCTCAGAGGGTCACAGACT+TGG + chr3_3:49362388-49362407 Msa0456080:intron 50.0%
TGCCGAAGATGTTCATCTCC+TGG + chr3_3:49362418-49362437 Msa0456080:CDS 50.0%
GCAACAGAAACTACCTAGCC+AGG - chr3_3:49362439-49362458 None:intergenic 50.0%
TGGCAGTGCCAGCAAATTTG+AGG - chr3_3:49362661-49362680 None:intergenic 50.0%
TGGAGGATCTTCTGCCACAA+AGG - chr3_3:49362865-49362884 None:intergenic 50.0%
! TGTAGGAACACATGATGGGG+AGG + chr3_3:49362923-49362942 Msa0456080:CDS 50.0%
ATCAGCATCACAGGATGGCA+CGG + chr3_3:49362989-49363008 Msa0456080:CDS 50.0%
TGAGGTCTGAACACAGCAAG+TGG - chr3_3:49363620-49363639 None:intergenic 50.0%
GCTGTGTTCAGACCTCATGA+TGG + chr3_3:49363623-49363642 Msa0456080:CDS 50.0%
! CCGATTTTGTGGTCCCTTCA+AGG - chr3_3:49363983-49364002 None:intergenic 50.0%
TGGGTCTCAGCTAGTGAAGA+AGG + chr3_3:49364015-49364034 Msa0456080:CDS 50.0%
GGGCATGGTCACAGTAAACT+CGG - chr3_3:49364259-49364278 None:intergenic 50.0%
! CCCGCATTTTCTAATGGTGG+AGG - chr3_3:49364399-49364418 None:intergenic 50.0%
ACCTGCAGACGAGTCTAAAG+AGG - chr3_3:49364478-49364497 None:intergenic 50.0%
! CAAGCAAGTAGCACTGAGAG+TGG + chr3_3:49364546-49364565 Msa0456080:CDS 50.0%
GAAAGCTTCCTGGACAACCT+TGG - chr3_3:49364729-49364748 None:intergenic 50.0%
TATGGTCGACAGAGTGAGTG+AGG + chr3_3:49365007-49365026 Msa0456080:CDS 50.0%
! GATCCAGGATGTGGTTGATG+TGG + chr3_3:49365040-49365059 Msa0456080:CDS 50.0%
TACCCACATCAACCACATCC+TGG - chr3_3:49365046-49365065 None:intergenic 50.0%
TGCTCTCAGGCTTCTGATCT+TGG + chr3_3:49365179-49365198 Msa0456080:CDS 50.0%
GTCTTGAAGTCCATCCTCAC+CGG - chr3_3:49365315-49365334 None:intergenic 50.0%
ATTGCATGCACTAGGAGACG+GGG - chr3_3:49365465-49365484 None:intergenic 50.0%
! AGCCCACAAAGCATCAGCAT+TGG - chr3_3:49366181-49366200 None:intergenic 50.0%
CAAGGATCTACCAGCAGCAT+TGG + chr3_3:49366287-49366306 Msa0456080:CDS 50.0%
TACTATCGCGGAATCCTTCC+AGG + chr3_3:49366395-49366414 Msa0456080:CDS 50.0%
AGCTCGAAGCTACTGTAGCT+AGG + chr3_3:49366597-49366616 Msa0456080:CDS 50.0%
TGCAGCAACGCCTTGAATCT+GGG + chr3_3:49366915-49366934 Msa0456080:CDS 50.0%
ACGAAGTAGGCCCAGATTCA+AGG - chr3_3:49366928-49366947 None:intergenic 50.0%
TGAATCTGGGCCTACTTCGT+TGG + chr3_3:49366928-49366947 Msa0456080:CDS 50.0%
ACGAAGCTTCTCTGAACAGG+AGG - chr3_3:49367218-49367237 None:intergenic 50.0%
TGTCCCTGGCATTACTCTTG+TGG - chr3_3:49367399-49367418 None:intergenic 50.0%
!! GGTGTTGAAAAGAGTGTCCC+TGG - chr3_3:49367413-49367432 None:intergenic 50.0%
TGGCACACTCAACAAAAGGC+GGG - chr3_3:49367626-49367645 None:intergenic 50.0%
CTGGCACACTCAACAAAAGG+CGG - chr3_3:49367627-49367646 None:intergenic 50.0%
! GCCTTTTGTTGAGTGTGCCA+GGG + chr3_3:49367626-49367645 Msa0456080:intron 50.0%
ACCCTGGCACACTCAACAAA+AGG - chr3_3:49367630-49367649 None:intergenic 50.0%
CTCGAGCACTTCTCTACTCA+AGG - chr3_3:49367927-49367946 None:intergenic 50.0%
!! CTTGAGTAGAGAAGTGCTCG+AGG + chr3_3:49367925-49367944 Msa0456080:CDS 50.0%
CGAGGGTCAGAGAAAGCTAA+TGG + chr3_3:49367943-49367962 Msa0456080:CDS 50.0%
GTAAAGGACCGTTGTTCAGC+TGG - chr3_3:49368018-49368037 None:intergenic 50.0%
AGCTCCTTTGTGGGATCTAG+TGG - chr3_3:49368177-49368196 None:intergenic 50.0%
ATCCCACAAAGGAGCTAGCA+AGG + chr3_3:49368181-49368200 Msa0456080:CDS 50.0%
CAACCTTGCTAGCTCCTTTG+TGG - chr3_3:49368187-49368206 None:intergenic 50.0%
!! CTGATTGGCTTGGGTGTGTT+TGG + chr3_3:49368366-49368385 Msa0456080:intron 50.0%
GTTCCTCTTCCCTTAAGCCA+AGG + chr3_3:49368636-49368655 Msa0456080:CDS 50.0%
ACACCTTGGCTTAAGGGAAG+AGG - chr3_3:49368642-49368661 None:intergenic 50.0%
TGTCATCCACGAGAGCTTTC+GGG - chr3_3:49368715-49368734 None:intergenic 50.0%
CTGTCATCCACGAGAGCTTT+CGG - chr3_3:49368716-49368735 None:intergenic 50.0%
AAAGGGGTTGGAGAAGGTGG+TGG - chr3_3:49360770-49360789 None:intergenic 55.0%
TCGAAAGGGGTTGGAGAAGG+TGG - chr3_3:49360773-49360792 None:intergenic 55.0%
GGGTTAGGGTTAGGGTTTGG+GGG - chr3_3:49360815-49360834 None:intergenic 55.0%
AGGAGCGGAGGAAGGGAATT+GGG - chr3_3:49360855-49360874 None:intergenic 55.0%
AAGGAGCGGAGGAAGGGAAT+TGG - chr3_3:49360856-49360875 None:intergenic 55.0%
! GAGGATGAAGAAGGTGGTGG+CGG - chr3_3:49360881-49360900 None:intergenic 55.0%
GAGGAGGATGAAGAAGGTGG+TGG - chr3_3:49360884-49360903 None:intergenic 55.0%
GTGAGGGAAAGGGTAAGAGG+AGG - chr3_3:49360900-49360919 None:intergenic 55.0%
!! GAAGCTGAAGCTGGTGATGG+TGG - chr3_3:49360949-49360968 None:intergenic 55.0%
GCTGAAGCTGAAGCTGGTGA+TGG - chr3_3:49360952-49360971 None:intergenic 55.0%
GCTGAAGCTGAAGCTGAAGC+TGG - chr3_3:49360958-49360977 None:intergenic 55.0%
! GTGGTTGTAGAGGGGGTGTA+GGG - chr3_3:49361045-49361064 None:intergenic 55.0%
!! GAAGGAGGTGGGATTGGTTG+AGG - chr3_3:49361076-49361095 None:intergenic 55.0%
CCGGCGTTAGGATTTGAAGG+AGG - chr3_3:49361091-49361110 None:intergenic 55.0%
! GCACCGGCGTTAGGATTTGA+AGG - chr3_3:49361094-49361113 None:intergenic 55.0%
TGCTGAGGAGAGCCATGAGA+CGG - chr3_3:49361117-49361136 None:intergenic 55.0%
!! GAGATGGGCTGTGATTGTGG+CGG - chr3_3:49361172-49361191 None:intergenic 55.0%
!! GAGGAGATGGGCTGTGATTG+TGG - chr3_3:49361175-49361194 None:intergenic 55.0%
CAATCACAGCCCATCTCCTC+TGG + chr3_3:49361175-49361194 Msa0456080:CDS 55.0%
! GCATTGGCAGCAGTTATCGC+CGG - chr3_3:49361211-49361230 None:intergenic 55.0%
!! CCGAGTAGTAAGGTGCCGAA+AGG + chr3_3:49361256-49361275 Msa0456080:CDS 55.0%
TGAAGTGCAGCCTCAGCTTG+AGG + chr3_3:49361333-49361352 Msa0456080:CDS 55.0%
CAGATGGCCGTGTCTTTGTG+TGG + chr3_3:49362539-49362558 Msa0456080:CDS 55.0%
GTTGCAGCATTGCCTCATGC+AGG + chr3_3:49364138-49364157 Msa0456080:CDS 55.0%
GCCTCTTTAGACTCGTCTGC+AGG + chr3_3:49364474-49364493 Msa0456080:CDS 55.0%
CTCAAAGGAGGAGGTGGAGA+AGG - chr3_3:49364705-49364724 None:intergenic 55.0%
AACCTTGGGCTCAAAGGAGG+AGG - chr3_3:49364714-49364733 None:intergenic 55.0%
GACAACCTTGGGCTCAAAGG+AGG - chr3_3:49364717-49364736 None:intergenic 55.0%
CTGGACAACCTTGGGCTCAA+AGG - chr3_3:49364720-49364739 None:intergenic 55.0%
CTTTGAGCCCAAGGTTGTCC+AGG + chr3_3:49364718-49364737 Msa0456080:CDS 55.0%
ATTGAGATGGCCCGAGAGTG+TGG + chr3_3:49365203-49365222 Msa0456080:CDS 55.0%
ACCTATCGCACCACACTCTC+GGG - chr3_3:49365216-49365235 None:intergenic 55.0%
CACCTATCGCACCACACTCT+CGG - chr3_3:49365217-49365236 None:intergenic 55.0%
! GAGAGTGTGGTGCGATAGGT+GGG + chr3_3:49365216-49365235 Msa0456080:CDS 55.0%
AGAGTGTGGTGCGATAGGTG+GGG + chr3_3:49365217-49365236 Msa0456080:CDS 55.0%
! CTCACCGGCATTGGAAGGTT+GGG - chr3_3:49365300-49365319 None:intergenic 55.0%
AAGTCCATCCTCACCGGCAT+TGG - chr3_3:49365309-49365328 None:intergenic 55.0%
TTCCATGCTTCTCCCTAGGG+CGG - chr3_3:49366145-49366164 None:intergenic 55.0%
ATAGAGAGGAGTGGGCGACA+AGG + chr3_3:49366541-49366560 Msa0456080:intron 55.0%
GTGCAGCAACGCCTTGAATC+TGG + chr3_3:49366914-49366933 Msa0456080:CDS 55.0%
! CGCCTTTTGTTGAGTGTGCC+AGG + chr3_3:49367625-49367644 Msa0456080:intron 55.0%
CTGCCCATCCAGCTGAACAA+CGG + chr3_3:49368007-49368026 Msa0456080:CDS 55.0%
GGACCGTTGTTCAGCTGGAT+GGG - chr3_3:49368013-49368032 None:intergenic 55.0%
AGGACCGTTGTTCAGCTGGA+TGG - chr3_3:49368014-49368033 None:intergenic 55.0%
GGCACCACTAGATCCCACAA+AGG + chr3_3:49368170-49368189 Msa0456080:CDS 55.0%
GCTTTCACTTCTGCAGCAGC+TGG + chr3_3:49368665-49368684 Msa0456080:CDS 55.0%
ACATGTCCCGAAAGCTCTCG+TGG + chr3_3:49368706-49368725 Msa0456080:CDS 55.0%
!! GAAGAAGGTGGTGGCGGTGA+AGG - chr3_3:49360875-49360894 None:intergenic 60.0%
! GGTGGTTGTAGAGGGGGTGT+AGG - chr3_3:49361046-49361065 None:intergenic 60.0%
GCTGAGGAGAGCCATGAGAC+GGG - chr3_3:49361116-49361135 None:intergenic 60.0%
!! GTTGGATTGGAGGGGTGCTG+AGG - chr3_3:49361132-49361151 None:intergenic 60.0%
! ATGGGCTGTGATTGTGGCGG+TGG - chr3_3:49361169-49361188 None:intergenic 60.0%
CGCCGGATTAACAGCACCAG+AGG - chr3_3:49361194-49361213 None:intergenic 60.0%
AACTGCTGCCAATGCTGCCG+CGG + chr3_3:49361216-49361235 Msa0456080:CDS 60.0%
CAGCCTAATCAACGCTGCCG+CGG - chr3_3:49361236-49361255 None:intergenic 60.0%
AGCTGAGGCTGCACTTCACC+AGG - chr3_3:49361331-49361350 None:intergenic 60.0%
ATCGGCGCAACCTCAAGCTG+AGG - chr3_3:49361346-49361365 None:intergenic 60.0%
CTTGGGCTCAAAGGAGGAGG+TGG - chr3_3:49364711-49364730 None:intergenic 60.0%
CACCTCCTCCTTTGAGCCCA+AGG + chr3_3:49364709-49364728 Msa0456080:CDS 60.0%
! CGAGAGTGTGGTGCGATAGG+TGG + chr3_3:49365215-49365234 Msa0456080:CDS 60.0%
TTCTACTGGAGGGGACTCGC+TGG + chr3_3:49365274-49365293 Msa0456080:CDS 60.0%
CTGGCCCAACCTTCCAATGC+CGG + chr3_3:49365293-49365312 Msa0456080:CDS 60.0%
! CCTCACCGGCATTGGAAGGT+TGG - chr3_3:49365301-49365320 None:intergenic 60.0%
CCAACCTTCCAATGCCGGTG+AGG + chr3_3:49365298-49365317 Msa0456080:CDS 60.0%
! CCATCCTCACCGGCATTGGA+AGG - chr3_3:49365305-49365324 None:intergenic 60.0%
CCTTCCAATGCCGGTGAGGA+TGG + chr3_3:49365302-49365321 Msa0456080:CDS 60.0%
GCACTAGGAGACGGGGAAGA+CGG - chr3_3:49365458-49365477 None:intergenic 60.0%
GCTCTCGTGGATGACAGACG+TGG + chr3_3:49368719-49368738 Msa0456080:CDS 60.0%
GCGGTGAAGGAGCGGAGGAA+GGG - chr3_3:49360862-49360881 None:intergenic 65.0%
!! AGGTGGTGGCGGTGAAGGAG+CGG - chr3_3:49360870-49360889 None:intergenic 65.0%
!! ATGAGACGGGCACCGGCGTT+AGG - chr3_3:49361103-49361122 None:intergenic 65.0%
TAACGCCGGTGCCCGTCTCA+TGG + chr3_3:49361102-49361121 Msa0456080:CDS 65.0%
GAGAGCCATGAGACGGGCAC+CGG - chr3_3:49361110-49361129 None:intergenic 65.0%
GGCTGTGATTGTGGCGGTGG+TGG - chr3_3:49361166-49361185 None:intergenic 65.0%
!! CTGCCGCGGCAGCGTTGATT+AGG + chr3_3:49361230-49361249 Msa0456080:CDS 65.0%
! GCCCGAGAGTGTGGTGCGAT+AGG + chr3_3:49365212-49365231 Msa0456080:CDS 65.0%
GACGGGGAAGACGGACCTGA+TGG - chr3_3:49365449-49365468 None:intergenic 65.0%
AGAAGGCTTGAGGCCGCCCT+AGG + chr3_3:49366129-49366148 Msa0456080:CDS 65.0%
GAAGGCTTGAGGCCGCCCTA+GGG + chr3_3:49366130-49366149 Msa0456080:CDS 65.0%
GAGAGGAGTGGGCGACAAGG+CGG + chr3_3:49366544-49366563 Msa0456080:intron 65.0%
GGCGGTGAAGGAGCGGAGGA+AGG - chr3_3:49360863-49360882 None:intergenic 70.0%
!! TGGTGGCGGTGAAGGAGCGG+AGG - chr3_3:49360867-49360886 None:intergenic 70.0%
CAACGCTGCCGCGGCAGCAT+TGG - chr3_3:49361227-49361246 None:intergenic 70.0%
GGCCGCCCTAGGGAGAAGCA+TGG + chr3_3:49366140-49366159 Msa0456080:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 49360518 49369191 49360518 ID=Msa0456080;Name=Msa0456080
chr3_3 mRNA 49360518 49369191 49360518 ID=Msa0456080-mRNA-1;Parent=Msa0456080;Name=Msa0456080-mRNA-1;_AED=0.03;_eAED=0.03;_QI=231|1|1|1|1|1|12|274|1386
chr3_3 exon 49360518 49361513 49360518 ID=Msa0456080-mRNA-1:exon:9302;Parent=Msa0456080-mRNA-1
chr3_3 exon 49362395 49362444 49362395 ID=Msa0456080-mRNA-1:exon:9303;Parent=Msa0456080-mRNA-1
chr3_3 exon 49362531 49362687 49362531 ID=Msa0456080-mRNA-1:exon:9304;Parent=Msa0456080-mRNA-1
chr3_3 exon 49362792 49363010 49362792 ID=Msa0456080-mRNA-1:exon:9305;Parent=Msa0456080-mRNA-1
chr3_3 exon 49363587 49363715 49363587 ID=Msa0456080-mRNA-1:exon:9306;Parent=Msa0456080-mRNA-1
chr3_3 exon 49363988 49365583 49363988 ID=Msa0456080-mRNA-1:exon:9307;Parent=Msa0456080-mRNA-1
chr3_3 exon 49366057 49366416 49366057 ID=Msa0456080-mRNA-1:exon:9308;Parent=Msa0456080-mRNA-1
chr3_3 exon 49366545 49366664 49366545 ID=Msa0456080-mRNA-1:exon:9309;Parent=Msa0456080-mRNA-1
chr3_3 exon 49366794 49366964 49366794 ID=Msa0456080-mRNA-1:exon:9310;Parent=Msa0456080-mRNA-1
chr3_3 exon 49367890 49368048 49367890 ID=Msa0456080-mRNA-1:exon:9311;Parent=Msa0456080-mRNA-1
chr3_3 exon 49368165 49368290 49368165 ID=Msa0456080-mRNA-1:exon:9312;Parent=Msa0456080-mRNA-1
chr3_3 exon 49368609 49369191 49368609 ID=Msa0456080-mRNA-1:exon:9313;Parent=Msa0456080-mRNA-1
chr3_3 five_prime_UTR 49360518 49360748 49360518 ID=Msa0456080-mRNA-1:five_prime_utr;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49360749 49361513 49360749 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49362395 49362444 49362395 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49362531 49362687 49362531 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49362792 49363010 49362792 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49363587 49363715 49363587 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49363988 49365583 49363988 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49366057 49366416 49366057 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49366545 49366664 49366545 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49366794 49366964 49366794 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49367890 49368048 49367890 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49368165 49368290 49368165 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 CDS 49368609 49368917 49368609 ID=Msa0456080-mRNA-1:cds;Parent=Msa0456080-mRNA-1
chr3_3 three_prime_UTR 49368918 49369191 49368918 ID=Msa0456080-mRNA-1:three_prime_utr;Parent=Msa0456080-mRNA-1
Gene Sequence

>Msa0456080

ATGTCTTCTCCCAATCAACCACCACCTTCTCCAACCCCTTTCGATATGCACACTTTCTTCAATCCCCCAAACCCTAACCCTAACCCTAACCCTAACATTTCTTCCCAATTCCCTTCCTCCGCTCCTTCACCGCCACCACCTTCTTCATCCTCCTCTTACCCTTTCCCTCACAACAACAATAACTACCCTTACGATCACCACCATCACCAGCTTCAGCTTCAGCTTCAGCATCAACAACAGCACCATCAACAAAACCAGACCAATTTTCCAATTCAACACCGTTCAATTTCATTCCCTACACCCCCTCTACAACCACCTCAACAACCTCAACCAATCCCACCTCCTTCAAATCCTAACGCCGGTGCCCGTCTCATGGCTCTCCTCAGCACCCCTCCAATCCAACAACAACAACAACCACCACCGCCACAATCACAGCCCATCTCCTCTGGTGCTGTTAATCCGGCGATAACTGCTGCCAATGCTGCCGCGGCAGCGTTGATTAGGCTGCCGAGTAGTAAGGTGCCGAAAGGAAGGCATTTGATTGGTGATCATGTTGTGTATGATGTGGATGTTAGGTTGCCTGGTGAAGTGCAGCCTCAGCTTGAGGTTGCGCCGATTACGAAATATGGATCGGATCCTAATCCGGTTTTGGGTCGACAGATTGCTGTGAATAAGTCTTATATTTGTTATGGGTTGAAACAGGGGAATATCAGGGTGCTTAATATTCATACTGCTGTTAGATCTTTGCTTAGAGGGCACACTCAGAGGGTCACAGACTTGGCATTCTTTGCCGAAGATGTTCATCTCCTGGCTAGTGTTGGCACAGATGGCCGTGTCTTTGTGTGGAAAATTTCTGAAGGTCCGGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTGTTCAAATAGTCGGAGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGCCACAAACAAGAAATTTTGATAGTTGGTATGGGAAAAAATGTTCTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCCTTTGTGGCAGAAGATCCTCCAAAATGTCCTCTTGACAAGCTCATTGATGGGGTTCAACTTGTAGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAATCGATTGGTATCAGCATCACAGGATGGCACGATAAAGATATGGGAAGATCGGAAGACACAGCCACTTGCTGTGTTCAGACCTCATGATGGGCATCCTGTTTTTTCTGCTACATTTTTTACTGCTCCACACCAGCCTGATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAGCTCTGGGTCTCAGCTAGTGAAGAAGGTTGGCTGCTCCCAAGCAATACTGAAACATGGAAATGCACTCAGACTTTGGAGTTGAAGAGTTCAGCTAAGCCGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTGCACTTGGAATATGGTCCTAATCCCGAATCAACTCGCATGGATTATATGTCCGAGTTTACTGTGACCATGCCCATTCTTAGTTTTACTGGAACAAGTGATATTTTGCCTCATGGGGAACATATTGTTCAGGTTTATTGTGTTCAGACACTGGCTATTCAGCAGTATGCTTTGGATTTGGCACAATGCTTGCCTCCACCATTAGAAAATGCGGGACTAGATAAGTCTGATTCCAGTGTTTCACGAGATGCAATTACTGCTGAAGGATTTGCCTCTTTAGACTCGTCTGCAGGTAGAACATCTGAGATGTCTTTACCCAGTTCTACTCCCAAAACAATGATGCAAGCAAGTAGCACTGAGAGTGGTCTCGTGTCAAGATACCCTTTAAGCTCAGGTCATACTGAAGCACCTATTTCTAGACAAATCAGCAGTTCAAATATTGAAGCTAAAACTGTTACACTGGCTCCTTCTAGTAGTGATGCTGATATTGTTTGTGTTCCTTCTCCACCTCCTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGAGTGATCATGTTGGGGACCAAGCTGTTAATGATTATTCTGTTGACAGACAAATGGATACAATTCACAGGAACTTGTCCGACCAATTTAATAGCGATACAAAGAATGATGACAATAAAAACAAACAGGATGACATTTCTACTGTACTTAACCCTTCTGTCATTTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATTACAAAAGCCAGTTCCTCCTCTGAGACTAATATGGTCGACAGAGTGAGTGAGGTAGAAACAAAGATCCAGGATGTGGTTGATGTGGGTAATGCCGAAGTAGAAGTGAAAGTGGTAGGTGAAGCAAGGCCTAATCAAAATGATGAACTTGGCAAGCAGGGGCCACAACAAAACCCAGTTTCTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCATTGAGATGGCCCGAGAGTGTGGTGCGATAGGTGGGGAGACTTACATTACAGAGGAACCTGGAAAAGTTGATTCTACTGGAGGGGACTCGCTGGCCCAACCTTCCAATGCCGGTGAGGATGGACTTCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCCGACTCATCTACATCAATGGTAGTACCACCATCACCTGCATCTAATACAAAAGGGAAGAGACAAAAGGGTAAGAACTCTCAACCATCAGGTCCGTCTTCCCCGTCTCCTAGTGCATGCAATTCAACCGATTCGTCCAATGAACCAAATGGAATTTCAAACCTCCCATGTACTGAAAATAGCAATCCTCAAATTGCGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGACGGTAACAGTTCCAGTTACAAAAGAGGGTAGAAGGCTTGAGGCCGCCCTAGGGAGAAGCATGGAAAAAGCTGTTAAGTCCAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAAAATGCAAAAAATGAGAAGTTGTTGCGAGACCGTTTCCAACATGTTACAGGTTTGATTACCAACTTCATGAACAAGGATCTACCAGCAGCATTGGAGAAAACTGTAAAGAAGGAAATGACTTCAGTTGCACAAGCTTTAGTTCGTTCAATGTCTCCTGCTATTGAGAAAACATTATCATCTACTATCGCGGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCGGTGAATCAACTTGATAAATCAGTTAATTTAAAGCTCGAAGCTACTGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGTCAAACAGGCACTTCAGGATGCACTTAAATCCAGTTTTGAAACGACAGTGGTCCCTGCATTTGAGATGTCCTGCAAAGCCATGTTTGAGCAAGTTGATTCTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAGCAACGCCTTGAATCTGGGCCTACTTCGTTGGCAATGACTCTAAGGGATTCCATTAATTCAGCATCATCAGTTACTCAAACCTTGAGTAGAGAAGTGCTCGAGGGTCAGAGAAAGCTAATGGCACTTGCAACCTCAAGAACAAACTCTGGCACATTGAATACTCTGCCCATCCAGCTGAACAACGGTCCTTTACTTCATGAAAAGGTTGAGGCACCACTAGATCCCACAAAGGAGCTAGCAAGGTTGATTTCTGAGCGGAAATATGAGGAGGCATTTATTGCAGCACTACACAGAAGTGATGTATCTATTGTATCTTGGTTATGCTCTCAGGTTGATTTACATGGACTTTTGACATTGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCACTTCTGCAGCAGCTGGCATGTGATATCAACAATGACATGTCCCGAAAGCTCTCGTGGATGACAGACGTGGCTACTGCTATTAATCCCTCAGATCCCATGATAACAATGCACGTGCGACCCATCTTTGAGCAAGTCTATCAGATACTGAACCATCAACGTAACTTGCCTTCTATCACTGGATCTGATCTTTCAAGTACCCGTCTTTTATTGCATGTCATCAACTCCATGCTGACGACATGTAAATGA
Protein sequence

>Msa0456080

MSSPNQPPPSPTPFDMHTFFNPPNPNPNPNPNISSQFPSSAPSPPPPSSSSSYPFPHNNNNYPYDHHHHQLQLQLQHQQQHHQQNQTNFPIQHRSISFPTPPLQPPQQPQPIPPPSNPNAGARLMALLSTPPIQQQQQPPPPQSQPISSGAVNPAITAANAAAAALIRLPSSKVPKGRHLIGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAVQIVGEEKVEHPQICWHCHKQEILIVGMGKNVLRIDTTKVGNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLAVFRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSNTETWKCTQTLELKSSAKPSLKDAFFNQVAALPHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYMSEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENAGLDKSDSSVSRDAITAEGFASLDSSAGRTSEMSLPSSTPKTMMQASSTESGLVSRYPLSSGHTEAPISRQISSSNIEAKTVTLAPSSSDADIVCVPSPPPPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVDRQMDTIHRNLSDQFNSDTKNDDNKNKQDDISTVLNPSVIFKQPTHLVTPSEITKASSSSETNMVDRVSEVETKIQDVVDVGNAEVEVKVVGEARPNQNDELGKQGPQQNPVSDGKEKFFCSQASDLGIEMARECGAIGGETYITEEPGKVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSDSSTSMVVPPSPASNTKGKRQKGKNSQPSGPSSPSPSACNSTDSSNEPNGISNLPCTENSNPQIAAMQDSLNQLLTMQKEMQKQMTMTVTVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRFQHVTGLITNFMNKDLPAALEKTVKKEMTSVAQALVRSMSPAIEKTLSSTIAESFQRGVGDKAVNQLDKSVNLKLEATVARQIQAQFQTTVKQALQDALKSSFETTVVPAFEMSCKAMFEQVDSTFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLSREVLEGQRKLMALATSRTNSGTLNTLPIQLNNGPLLHEKVEAPLDPTKELARLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHGLLTLVPLPLSQGVVLSLLQQLACDINNDMSRKLSWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRNLPSITGSDLSSTRLLLHVINSMLTTCK*