Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364800 | KHN23497.1 | 91.813 | 171 | 0 | 1 | 1 | 157 | 1 | 171 | 6.15e-97 | 287 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364800 | sp|P0CG89|H4_SOYBN | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.97e-64 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364800 | A0A0B2QV23 | 91.813 | 171 | 0 | 1 | 1 | 157 | 1 | 171 | 2.94e-97 | 287 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0055190 | Msa0364800 | 0.808440 | 3.093745e-50 | -8.615850e-47 |
| Msa0364800 | Msa1078170 | 0.806115 | 9.619120e-50 | -8.615850e-47 |
| Msa0364800 | Msa1093840 | 0.822719 | 2.037507e-53 | -8.615850e-47 |
| Msa0364800 | Msa1251160 | 0.803895 | 2.801552e-49 | -8.615850e-47 |
| Msa0364800 | Msa1451160 | 0.804869 | 1.755899e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364800 | MtrunA17_Chr4g0072411 | 100.000 | 101 | 0 | 0 | 57 | 157 | 61 | 161 | 2.93e-66 | 199 |
| Msa0364800 | MtrunA17_Chr5g0425951 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr4g0030431 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr3g0100121 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr3g0113681 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr2g0327641 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr3g0103351 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr8g0352791 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr3g0103821 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr3g0104031 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr7g0225731 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr3g0103801 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr3g0103881 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Msa0364800 | MtrunA17_Chr7g0262791 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 1.45e-65 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364800 | AT3G53730.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT1G07820.2 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT1G07820.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT5G59690.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT3G46320.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT2G28740.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT1G07660.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT3G45930.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT5G59970.1 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT5G59970.2 | 100.000 | 101 | 0 | 0 | 57 | 157 | 3 | 103 | 2.00e-65 | 195 |
| Msa0364800 | AT1G07660.2 | 83.168 | 101 | 0 | 1 | 57 | 157 | 3 | 86 | 2.44e-48 | 151 |
Find 57 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCGACGAATGGCAGGTT+TGG | 0.392523 | 3_1:+58301826 | None:intergenic |
| AGGCGTGTTGAAGATCTTCT+TGG | 0.399390 | 3_1:-58301750 | Msa0364800:CDS |
| GGAGGTAAGGGTCTGGGAAA+GGG | 0.428936 | 3_1:-58301899 | Msa0364800:CDS |
| GGAAGAACCCTCTATGGTTT+CGG | 0.433408 | 3_1:-58301635 | Msa0364800:CDS |
| GGGAGGTAAGGGTCTGGGAA+AGG | 0.433744 | 3_1:-58301900 | Msa0364800:CDS |
| AAAATGTCAGGTCGTGGAAA+GGG | 0.434071 | 3_1:-58305632 | Msa0364800:CDS |
| CTCGCCAATCGACGAATGGC+AGG | 0.441470 | 3_1:+58301821 | None:intergenic |
| AGGCAAGGAAGAACCCTCTA+TGG | 0.447332 | 3_1:-58301641 | Msa0364800:CDS |
| CTCGCCAATCGGCGAATAGC+AGG | 0.453484 | 3_1:+58305533 | None:intergenic |
| GAAGATCTTCAACACGCCTC+TGG | 0.457403 | 3_1:+58301754 | None:intergenic |
| GGTAAGGGTCTGGGAAAGGG+AGG | 0.476615 | 3_1:-58305608 | Msa0364800:CDS |
| ATCAACCTCCGAAACCATAG+AGG | 0.481091 | 3_1:+58301627 | None:intergenic |
| GGAAAGGGAGGTAAGGGTCT+GGG | 0.487818 | 3_1:-58301905 | Msa0364800:CDS |
| TGGAAAGGGAGGTAAGGGTC+TGG | 0.489772 | 3_1:-58301906 | Msa0364800:CDS |
| AGGTCGTGGAAAGGGAGGTA+AGG | 0.492819 | 3_1:-58301912 | Msa0364800:CDS |
| CACCACCTCTTCTCGCCAAT+CGG | 0.499060 | 3_1:+58305522 | None:intergenic |
| GGTTCTTCGTGACAACATCC+AGG | 0.501637 | 3_1:-58305567 | Msa0364800:CDS |
| CAAGCCTGCTATTCGCCGAT+TGG | 0.502152 | 3_1:-58305537 | Msa0364800:CDS |
| GGTAAGGGTCTGGGAAAGGG+AGG | 0.504941 | 3_1:-58301896 | Msa0364800:CDS |
| CAAACCTGCCATTCGTCGAT+TGG | 0.508013 | 3_1:-58301825 | Msa0364800:CDS |
| CTCCCGAAAATGTCAGGTCG+TGG | 0.510898 | 3_1:-58305638 | None:intergenic |
| CAATCGGCGAATAGCAGGCT+TGG | 0.515998 | 3_1:+58305538 | None:intergenic |
| TTACATACACTGAGCATGCT+AGG | 0.518049 | 3_1:-58301706 | Msa0364800:CDS |
| CGTCGATTGGCGAGAAGAGG+TGG | 0.519231 | 3_1:-58301812 | Msa0364800:CDS |
| AGGGAGGTGCAAAGAGACAT+AGG | 0.520046 | 3_1:-58305592 | Msa0364800:CDS |
| AGTTCTTCGTGATAACATCC+AGG | 0.522451 | 3_1:-58301855 | Msa0364800:CDS |
| GTCTATGCTTTGAAGAGGCA+AGG | 0.524806 | 3_1:-58301656 | Msa0364800:CDS |
| CGCCGATTGGCGAGAAGAGG+TGG | 0.530277 | 3_1:-58305524 | Msa0364800:CDS |
| AAATGTCAGGTCGTGGAAAG+GGG | 0.537019 | 3_1:-58305631 | Msa0364800:CDS |
| AAAATGTCAGGTCGTGGAAA+GGG | 0.538992 | 3_1:-58301920 | Msa0364800:intron |
| AATCAGTGGTTTGATCTATG+AGG | 0.550876 | 3_1:-58301780 | Msa0364800:CDS |
| GGTGGTGTGAAGAGAATCAG+TGG | 0.556654 | 3_1:-58305506 | Msa0364800:CDS |
| AGGGAGGTGCAAAGAGACAT+AGG | 0.568952 | 3_1:-58301880 | Msa0364800:CDS |
| GGTCGTGGAAAGGGAGGTAA+GGG | 0.572713 | 3_1:-58301911 | Msa0364800:CDS |
| AATGTCAGGTCGTGGAAAGG+GGG | 0.584231 | 3_1:-58305630 | Msa0364800:CDS |
| GAAAATGTCAGGTCGTGGAA+AGG | 0.584382 | 3_1:-58301921 | Msa0364800:intron |
| TCTTCTCGCCAATCGACGAA+TGG | 0.588421 | 3_1:+58301817 | None:intergenic |
| GAAAATGTCAGGTCGTGGAA+AGG | 0.589881 | 3_1:-58305633 | None:intergenic |
| TAGCAGGCTTGGTGATACCC+TGG | 0.594313 | 3_1:+58305549 | None:intergenic |
| ATTCGTCGATTGGCGAGAAG+AGG | 0.610547 | 3_1:-58301815 | Msa0364800:CDS |
| ATTCGCCGATTGGCGAGAAG+AGG | 0.615284 | 3_1:-58305527 | Msa0364800:CDS |
| ATGTCAGGTCGTGGAAAGGG+GGG | 0.615792 | 3_1:-58305629 | Msa0364800:CDS |
| AGGTGCAAAGAGACATAGGA+AGG | 0.617656 | 3_1:-58305588 | Msa0364800:CDS |
| GAGAAAGACAGTCACCGCCA+TGG | 0.618749 | 3_1:-58301684 | Msa0364800:CDS |
| TGGCAGGTTTGGTGATACCC+TGG | 0.627303 | 3_1:+58301837 | None:intergenic |
| AGAACCCTCTATGGTTTCGG+AGG | 0.630900 | 3_1:-58301632 | Msa0364800:CDS |
| CAAAGCATAGACAACATCCA+TGG | 0.634439 | 3_1:+58301667 | None:intergenic |
| GTTCTTCGTGATAACATCCA+GGG | 0.641996 | 3_1:-58301854 | Msa0364800:CDS |
| ATGTCAGGTCGTGGAAAGGG+AGG | 0.643397 | 3_1:-58301917 | Msa0364800:intron |
| CAGTGTATGTAACAGCATCA+CGG | 0.644284 | 3_1:+58301717 | None:intergenic |
| GGTGGTGTGAAAAGAATCAG+TGG | 0.664359 | 3_1:-58301794 | Msa0364800:CDS |
| TCAACCTCCGAAACCATAGA+GGG | 0.666233 | 3_1:+58301628 | None:intergenic |
| GTTCTTCGTGACAACATCCA+GGG | 0.676380 | 3_1:-58305566 | Msa0364800:CDS |
| TTGATCTATGAGGAAACCAG+AGG | 0.683016 | 3_1:-58301770 | Msa0364800:CDS |
| TTGATATATGAAGAAACCAG+AGG | 0.683025 | 3_1:-58305482 | Msa0364800:intron |
| ATGTTGTCTATGCTTTGAAG+AGG | 0.684273 | 3_1:-58301661 | Msa0364800:CDS |
| AGCATAGACAACATCCATGG+CGG | 0.735882 | 3_1:+58301670 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATTAAAATTACTATG+AGG | + | chr3_1:58303771-58303790 | None:intergenic | 10.0% |
| !!! | ATATATATTTTTTGACAAAA+TGG | + | chr3_1:58303830-58303849 | None:intergenic | 10.0% |
| !! | TTTGTCAAAAAATATATATA+TGG | - | chr3_1:58303831-58303850 | Msa0364800:intron | 10.0% |
| !! | GAAATAATTATTGTTTATTT+AGG | + | chr3_1:58304926-58304945 | None:intergenic | 10.0% |
| !!! | TAACTATTTTTTTTCTTTTT+AGG | + | chr3_1:58304966-58304985 | None:intergenic | 10.0% |
| !!! | TTTTAACCATTTTGTTTTTT+AGG | - | chr3_1:58302483-58302502 | Msa0364800:intron | 15.0% |
| !! | TTAAATCCTAAAAAACAAAA+TGG | + | chr3_1:58302492-58302511 | None:intergenic | 15.0% |
| !!! | TAAAAACATAAAAGTGTTTT+TGG | - | chr3_1:58302509-58302528 | Msa0364800:intron | 15.0% |
| !! | AATATTACACTAAATTGAAT+AGG | + | chr3_1:58302683-58302702 | None:intergenic | 15.0% |
| !!! | TTGTTTTTGTTTTCTAATTT+AGG | - | chr3_1:58303434-58303453 | Msa0364800:intron | 15.0% |
| !!! | TGTTTTTGTTTTCTAATTTA+GGG | - | chr3_1:58303435-58303454 | Msa0364800:intron | 15.0% |
| !! | AATTATTATAAATACCACAA+TGG | + | chr3_1:58303699-58303718 | None:intergenic | 15.0% |
| !!! | TCATAGATTTTAAATTTGTA+TGG | - | chr3_1:58303802-58303821 | Msa0364800:intron | 15.0% |
| !!! | TACAATTTTAAATTTTCCAT+TGG | + | chr3_1:58303880-58303899 | None:intergenic | 15.0% |
| !! | ATGAGTTTAAATTACAAAAA+AGG | - | chr3_1:58304541-58304560 | Msa0364800:intron | 15.0% |
| !! | TTGTTCATATTTATTTAAGT+AGG | - | chr3_1:58304626-58304645 | Msa0364800:intron | 15.0% |
| !!! | TTCTTTATTTAAGAAAAAGT+CGG | - | chr3_1:58304734-58304753 | Msa0364800:intron | 15.0% |
| !! | TTAGGAAATAATTATTGTTT+AGG | + | chr3_1:58304930-58304949 | None:intergenic | 15.0% |
| !! | AGAAAAAATTTGAGAAATTT+GGG | + | chr3_1:58305295-58305314 | None:intergenic | 15.0% |
| !! | AAGAAAAAATTTGAGAAATT+TGG | + | chr3_1:58305296-58305315 | None:intergenic | 15.0% |
| !! | GAAATCGAAATTTAATGAAA+AGG | - | chr3_1:58302101-58302120 | Msa0364800:intron | 20.0% |
| !! | ATGTATGTTTAAACATTGAT+CGG | - | chr3_1:58302266-58302285 | Msa0364800:intron | 20.0% |
| !! | ACTTATAAAAGTCTAAACAT+AGG | + | chr3_1:58302403-58302422 | None:intergenic | 20.0% |
| !!! | GACTTTTATAAGTTTTAATG+AGG | - | chr3_1:58302410-58302429 | Msa0364800:intron | 20.0% |
| !!! | AAAAGTGTTTTTGGTATAAA+CGG | - | chr3_1:58302518-58302537 | Msa0364800:intron | 20.0% |
| !!! | TTTTAATAATTCGATCAAGA+AGG | - | chr3_1:58303201-58303220 | Msa0364800:intron | 20.0% |
| !!! | GTTTTTGTTTTCTAATTTAG+GGG | - | chr3_1:58303436-58303455 | Msa0364800:intron | 20.0% |
| !! | TTATCAATAACATGTATGAA+AGG | - | chr3_1:58303622-58303641 | Msa0364800:intron | 20.0% |
| !!! | GACGTAACATTTTTTATATT+GGG | + | chr3_1:58304182-58304201 | None:intergenic | 20.0% |
| !!! | AGACGTAACATTTTTTATAT+TGG | + | chr3_1:58304183-58304202 | None:intergenic | 20.0% |
| !! | AATATAAAAAATGTTACGTC+TGG | - | chr3_1:58304182-58304201 | Msa0364800:intron | 20.0% |
| !!! | GTTTATAAAATTTGAGACAT+TGG | - | chr3_1:58304333-58304352 | Msa0364800:intron | 20.0% |
| !! | GTTCTATAAAAATTCATGTT+AGG | + | chr3_1:58304444-58304463 | None:intergenic | 20.0% |
| ! | AGAATTCTTGTTAGATGTTT+AGG | - | chr3_1:58302020-58302039 | Msa0364800:intron | 25.0% |
| ! | TCTTATGTAACAGAATGAAA+TGG | + | chr3_1:58302346-58302365 | None:intergenic | 25.0% |
| ! | TTGTATTAGTTAGTTCCATA+AGG | - | chr3_1:58302558-58302577 | Msa0364800:intron | 25.0% |
| ! | ACTAAATTGAATAGGAAAAC+GGG | + | chr3_1:58302675-58302694 | None:intergenic | 25.0% |
| ! | CACTAAATTGAATAGGAAAA+CGG | + | chr3_1:58302676-58302695 | None:intergenic | 25.0% |
| ! | TAATATTAACATGCCATCTT+TGG | - | chr3_1:58302696-58302715 | Msa0364800:intron | 25.0% |
| ! | ATAATTGAATACACCAAAGA+TGG | + | chr3_1:58302712-58302731 | None:intergenic | 25.0% |
| ! | CAATTATACATATCCTACAA+TGG | - | chr3_1:58302725-58302744 | Msa0364800:intron | 25.0% |
| !! | AAAAAGTGCATGAACAAATT+TGG | + | chr3_1:58303079-58303098 | None:intergenic | 25.0% |
| !!! | CTTTTTATGTTGGTTAAATG+AGG | - | chr3_1:58303093-58303112 | Msa0364800:intron | 25.0% |
| ! | TACCTTAAAATACAATCACT+CGG | + | chr3_1:58303325-58303344 | None:intergenic | 25.0% |
| ! | GGTATTACTTAAGTTTCAAT+TGG | + | chr3_1:58303859-58303878 | None:intergenic | 25.0% |
| ! | TGAAACTTAAGTAATACCAA+TGG | - | chr3_1:58303861-58303880 | Msa0364800:intron | 25.0% |
| ! | AAATAGTCATCAAAGTCATT+TGG | + | chr3_1:58303978-58303997 | None:intergenic | 25.0% |
| ! | TCAATATCATCCTACATTAA+CGG | - | chr3_1:58304116-58304135 | Msa0364800:intron | 25.0% |
| !! | TTAAAAGTGTGTTTATCTCT+TGG | + | chr3_1:58304218-58304237 | None:intergenic | 25.0% |
| !!! | AGTATGTAGTCTTTTTTTTG+TGG | + | chr3_1:58304871-58304890 | None:intergenic | 25.0% |
| !!! | TTAGTTTTACCAAAAGTAGA+CGG | - | chr3_1:58304988-58305007 | Msa0364800:intron | 25.0% |
| !! | CGTCGATAACTAAATTTTAA+CGG | + | chr3_1:58305088-58305107 | None:intergenic | 25.0% |
| !! | AATTTTCTCTTGAAAATGTC+AGG | - | chr3_1:58305325-58305344 | Msa0364800:intron | 25.0% |
| TTGATATATGAAGAAACCAG+AGG | - | chr3_1:58301775-58301794 | Msa0364800:CDS | 30.0% | |
| AGGTGTATTGAAGATATTCT+TGG | - | chr3_1:58301795-58301814 | Msa0364800:CDS | 30.0% | |
| !!! | TTTTCCTTTAGCTCTGTAAT+TGG | - | chr3_1:58301979-58301998 | Msa0364800:intron | 30.0% |
| TATTCCAATTACAGAGCTAA+AGG | + | chr3_1:58301986-58302005 | None:intergenic | 30.0% | |
| CTTGAAAATTTAGTGCTAAC+AGG | + | chr3_1:58302182-58302201 | None:intergenic | 30.0% | |
| TATGTTTAAACATTGATCGG+TGG | - | chr3_1:58302269-58302288 | Msa0364800:intron | 30.0% | |
| TCAAATGAAGTTCACTTTAC+TGG | - | chr3_1:58302439-58302458 | Msa0364800:intron | 30.0% | |
| TGGTATAAACGGTTAAGAAA+TGG | - | chr3_1:58302529-58302548 | Msa0364800:intron | 30.0% | |
| ! | TTTTTATAGAGCACACCTTA+TGG | + | chr3_1:58302576-58302595 | None:intergenic | 30.0% |
| AAGGTACAACTGTAATACAT+TGG | + | chr3_1:58302604-58302623 | None:intergenic | 30.0% | |
| TGAGGAATCTTATTGATAGA+AGG | + | chr3_1:58302623-58302642 | None:intergenic | 30.0% | |
| TCTATCAATAAGATTCCTCA+TGG | - | chr3_1:58302623-58302642 | Msa0364800:intron | 30.0% | |
| AAATCGACTAGAAAATGACT+TGG | + | chr3_1:58302837-58302856 | None:intergenic | 30.0% | |
| !! | GTCATTTTCTAGTCGATTTT+TGG | - | chr3_1:58302838-58302857 | Msa0364800:intron | 30.0% |
| !! | AAGTGAATTTTGATAGGATC+AGG | + | chr3_1:58302886-58302905 | None:intergenic | 30.0% |
| !! | GATTGCAAGTGAATTTTGAT+AGG | + | chr3_1:58302892-58302911 | None:intergenic | 30.0% |
| !! | TGTTCATGCACTTTTTATGT+TGG | - | chr3_1:58303083-58303102 | Msa0364800:intron | 30.0% |
| ! | ATCCGAGTGATTGTATTTTA+AGG | - | chr3_1:58303320-58303339 | Msa0364800:intron | 30.0% |
| !!! | CTGTATTTTCTGGTTTTTTC+AGG | - | chr3_1:58303396-58303415 | Msa0364800:intron | 30.0% |
| AAGCAATACAAAGAAAAGTG+TGG | + | chr3_1:58303504-58303523 | None:intergenic | 30.0% | |
| TGATAAACCTAATTGACAGA+AGG | - | chr3_1:58303998-58304017 | Msa0364800:intron | 30.0% | |
| !! | AGAGTTGGTGTATAAATGAA+TGG | - | chr3_1:58304031-58304050 | Msa0364800:intron | 30.0% |
| AAATTCGATATTCAGTCCAA+AGG | - | chr3_1:58304077-58304096 | Msa0364800:intron | 30.0% | |
| !!! | AGTTTTGGCTCAGATTTAAT+TGG | + | chr3_1:58304147-58304166 | None:intergenic | 30.0% |
| CATTAACCTCATAGGTTATA+TGG | + | chr3_1:58304259-58304278 | None:intergenic | 30.0% | |
| CATATAACCTATGAGGTTAA+TGG | - | chr3_1:58304257-58304276 | Msa0364800:intron | 30.0% | |
| ACCTCTTAAGGTTATTAGAT+AGG | + | chr3_1:58304652-58304671 | None:intergenic | 30.0% | |
| ! | AACCTTAAGAGGTTTTTGAA+TGG | - | chr3_1:58304659-58304678 | Msa0364800:intron | 30.0% |
| AACCATTCAAAAACCTCTTA+AGG | + | chr3_1:58304664-58304683 | None:intergenic | 30.0% | |
| !!! | ATGTAGTCTTTTTTTTGTGG+TGG | + | chr3_1:58304868-58304887 | None:intergenic | 30.0% |
| GAATATCTTCAATACACCTC+TGG | + | chr3_1:58301794-58301813 | None:intergenic | 35.0% | |
| GTAATTCTCGATGAGATTGA+AGG | - | chr3_1:58302057-58302076 | Msa0364800:intron | 35.0% | |
| ! | TGTGTTTTCATTGTGAGTTG+TGG | - | chr3_1:58302232-58302251 | Msa0364800:intron | 35.0% |
| ! | GTGTTTTCATTGTGAGTTGT+GGG | - | chr3_1:58302233-58302252 | Msa0364800:intron | 35.0% |
| TCACTTGCAATCATTACAAG+TGG | - | chr3_1:58302900-58302919 | Msa0364800:intron | 35.0% | |
| TGAAATCGCAGTGCAAAAAA+AGG | + | chr3_1:58303000-58303019 | None:intergenic | 35.0% | |
| ! | GAATTGGCTTCAAATCATGT+TGG | - | chr3_1:58303045-58303064 | Msa0364800:intron | 35.0% |
| AAGTGCATGAACAAATTTGG+AGG | + | chr3_1:58303076-58303095 | None:intergenic | 35.0% | |
| ! | TATGTTGGTTAAATGAGGTG+AGG | - | chr3_1:58303098-58303117 | Msa0364800:intron | 35.0% |
| !! | GGAGGGGTTTTTGTTTAATT+TGG | - | chr3_1:58303134-58303153 | Msa0364800:intron | 35.0% |
| TGTCCTAATGATCCAAATTG+CGG | + | chr3_1:58303164-58303183 | None:intergenic | 35.0% | |
| GATCAAGAAGGTTAATGACT+TGG | - | chr3_1:58303213-58303232 | Msa0364800:intron | 35.0% | |
| ! | CGATAGGACTTTTATCTTCT+CGG | + | chr3_1:58303239-58303258 | None:intergenic | 35.0% |
| AGAAGATAAAAGTCCTATCG+TGG | - | chr3_1:58303239-58303258 | Msa0364800:intron | 35.0% | |
| TAAAAGTCCTATCGTGGAAT+TGG | - | chr3_1:58303245-58303264 | Msa0364800:intron | 35.0% | |
| CTACTCATACTACAAACATG+AGG | + | chr3_1:58303293-58303312 | None:intergenic | 35.0% | |
| GTTTGTAGTATGAGTAGTGT+TGG | - | chr3_1:58303296-58303315 | Msa0364800:intron | 35.0% | |
| !!! | ATTGTATTTTAAGGTAGCCG+TGG | - | chr3_1:58303329-58303348 | Msa0364800:intron | 35.0% |
| !!! | TTGTATTTTAAGGTAGCCGT+GGG | - | chr3_1:58303330-58303349 | Msa0364800:intron | 35.0% |
| !!! | TATGTTGTTTTTGGTGCTGT+TGG | - | chr3_1:58303358-58303377 | Msa0364800:intron | 35.0% |
| TTACTATGAGGCAATTGCTA+TGG | + | chr3_1:58303759-58303778 | None:intergenic | 35.0% | |
| ATCAAAGTCATTTGGACTTG+AGG | + | chr3_1:58303970-58303989 | None:intergenic | 35.0% | |
| TCAAACTCCTTCTGTCAATT+AGG | + | chr3_1:58304008-58304027 | None:intergenic | 35.0% | |
| ! | GAAGGAGTTTGAAATAGAGT+TGG | - | chr3_1:58304016-58304035 | Msa0364800:intron | 35.0% |
| TGTAGGATGATATTGATCCT+GGG | + | chr3_1:58304112-58304131 | None:intergenic | 35.0% | |
| ATGTAGGATGATATTGATCC+TGG | + | chr3_1:58304113-58304132 | None:intergenic | 35.0% | |
| ATATCATCCTACATTAACGG+AGG | - | chr3_1:58304119-58304138 | Msa0364800:intron | 35.0% | |
| TAACCTCATAGGTTATATGG+TGG | + | chr3_1:58304256-58304275 | None:intergenic | 35.0% | |
| ! | GTTGTTTCCATTAACCTCAT+AGG | + | chr3_1:58304267-58304286 | None:intergenic | 35.0% |
| GCCTATCTAATAACCTTAAG+AGG | - | chr3_1:58304648-58304667 | Msa0364800:intron | 35.0% | |
| !!! | GTGCTAGTTTTGGTGTTTTT+GGG | + | chr3_1:58305021-58305040 | None:intergenic | 35.0% |
| !!! | TGTGCTAGTTTTGGTGTTTT+TGG | + | chr3_1:58305022-58305041 | None:intergenic | 35.0% |
| AAACACCAAAACTAGCACAA+AGG | - | chr3_1:58305023-58305042 | Msa0364800:intron | 35.0% | |
| !! | TACTTCCTTTGTGCTAGTTT+TGG | + | chr3_1:58305031-58305050 | None:intergenic | 35.0% |
| !! | GTTGGATTTCAAGTTATCGA+CGG | + | chr3_1:58305155-58305174 | None:intergenic | 35.0% |
| GAGTATTTATCTGTGGTAGT+TGG | + | chr3_1:58305232-58305251 | None:intergenic | 35.0% | |
| TGGATCTGAGTATTTATCTG+TGG | + | chr3_1:58305239-58305258 | None:intergenic | 35.0% | |
| AATCAGTGGTTTGATCTATG+AGG | - | chr3_1:58305477-58305496 | Msa0364800:intron | 35.0% | |
| !! | ATGTTGTCTATGCTTTGAAG+AGG | - | chr3_1:58301884-58301903 | Msa0364800:CDS | 35.0% |
| CAAAGCATAGACAACATCCA+TGG | + | chr3_1:58301881-58301900 | None:intergenic | 40.0% | |
| !! | TGTCTATGCTTTGAAGAGAC+AGG | - | chr3_1:58301888-58301907 | Msa0364800:CDS | 40.0% |
| !! | GTCTATGCTTTGAAGAGACA+GGG | - | chr3_1:58301889-58301908 | Msa0364800:CDS | 40.0% |
| AAGATTCCTCATGGTGTTCA+AGG | - | chr3_1:58302632-58302651 | Msa0364800:intron | 40.0% | |
| TAAACACCTTGAACACCATG+AGG | + | chr3_1:58302641-58302660 | None:intergenic | 40.0% | |
| CCTATCAGTAGTACCATTGT+AGG | + | chr3_1:58302741-58302760 | None:intergenic | 40.0% | |
| CCTACAATGGTACTACTGAT+AGG | - | chr3_1:58302738-58302757 | Msa0364800:intron | 40.0% | |
| ! | GGAATAATTTTGCAGCTCAG+TGG | + | chr3_1:58302865-58302884 | None:intergenic | 40.0% |
| !! | GTTCAGTCAAGTGTTGAATG+CGG | - | chr3_1:58302922-58302941 | Msa0364800:intron | 40.0% |
| !!! | GCGGTGAATTGTGTTTTTTG+CGG | - | chr3_1:58302950-58302969 | Msa0364800:intron | 40.0% |
| !!! | GTGAATTGTGTTTTTTGCGG+TGG | - | chr3_1:58302953-58302972 | Msa0364800:intron | 40.0% |
| !!! | TTGTGTTTTTTGCGGTGGAA+TGG | - | chr3_1:58302958-58302977 | Msa0364800:intron | 40.0% |
| GCACTGCGATTTCATTTCAA+AGG | - | chr3_1:58303006-58303025 | Msa0364800:intron | 40.0% | |
| GCGATTTCATTTCAAAGGTG+TGG | - | chr3_1:58303011-58303030 | Msa0364800:intron | 40.0% | |
| ! | CATTTCAAAGGTGTGGTTGA+AGG | - | chr3_1:58303018-58303037 | Msa0364800:intron | 40.0% |
| !! | TGTGGTTGAAGGTGTTGAAT+TGG | - | chr3_1:58303029-58303048 | Msa0364800:intron | 40.0% |
| TAATTTGGCACACCGCAATT+TGG | - | chr3_1:58303149-58303168 | Msa0364800:intron | 40.0% | |
| ACACCGCAATTTGGATCATT+AGG | - | chr3_1:58303158-58303177 | Msa0364800:intron | 40.0% | |
| TTTGGATCATTAGGACAGAG+AGG | - | chr3_1:58303167-58303186 | Msa0364800:intron | 40.0% | |
| TAAGACTCCAATTCCACGAT+AGG | + | chr3_1:58303255-58303274 | None:intergenic | 40.0% | |
| AAAACAACATAACCCACCCA+CGG | + | chr3_1:58303349-58303368 | None:intergenic | 40.0% | |
| !!! | TGGGTGGGTTATGTTGTTTT+TGG | - | chr3_1:58303349-58303368 | Msa0364800:intron | 40.0% |
| TCTTTGTATTGCTTGCCCTT+TGG | - | chr3_1:58303510-58303529 | Msa0364800:intron | 40.0% | |
| GACTGTCATGAATGACATTG+CGG | + | chr3_1:58303906-58303925 | None:intergenic | 40.0% | |
| ATTGGATCCTCCGTTAATGT+AGG | + | chr3_1:58304129-58304148 | None:intergenic | 40.0% | |
| ! | GGGTCAATCGATACAAGTTT+TGG | + | chr3_1:58304162-58304181 | None:intergenic | 40.0% |
| ACACCACCATATAACCTATG+AGG | - | chr3_1:58304250-58304269 | Msa0364800:intron | 40.0% | |
| GTGAGCTTAGATCAGTTAGT+AGG | - | chr3_1:58304799-58304818 | Msa0364800:intron | 40.0% | |
| ACAACGCATGGTAATATGCA+AGG | - | chr3_1:58304823-58304842 | Msa0364800:intron | 40.0% | |
| !!! | AGTCTTTTTTTTGTGGTGGC+CGG | + | chr3_1:58304864-58304883 | None:intergenic | 40.0% |
| !!! | CTAGTTTTGGTGTTTTTGGG+CGG | + | chr3_1:58305018-58305037 | None:intergenic | 40.0% |
| ! | TCCATTTTCGTAAGTACACG+CGG | - | chr3_1:58305115-58305134 | Msa0364800:intron | 40.0% |
| !!! | TGTGTTTTGATCTGCATCGT+TGG | + | chr3_1:58305173-58305192 | None:intergenic | 40.0% |
| GTGTGTGAGAAAGATGAAAG+TGG | + | chr3_1:58305259-58305278 | None:intergenic | 40.0% | |
| AAAATGTCAGGTCGTGGAAA+GGG | - | chr3_1:58305337-58305356 | Msa0364800:intron | 40.0% | |
| AGTTCTTCGTGATAACATCC+AGG | - | chr3_1:58305402-58305421 | Msa0364800:intron | 40.0% | |
| GTTCTTCGTGATAACATCCA+GGG | - | chr3_1:58305403-58305422 | Msa0364800:intron | 40.0% | |
| TTGATCTATGAGGAAACCAG+AGG | - | chr3_1:58305487-58305506 | Msa0364800:CDS | 40.0% | |
| CAGTGTATGTAACAGCATCA+CGG | + | chr3_1:58305543-58305562 | None:intergenic | 40.0% | |
| TTACATACACTGAGCATGCT+AGG | - | chr3_1:58305551-58305570 | Msa0364800:CDS | 40.0% | |
| CAAAGCATAGACAACATCCA+TGG | + | chr3_1:58301881-58301900 | None:intergenic | 40.0% | |
| AGGTGCAAAGAGACATAGGA+AGG | - | chr3_1:58301669-58301688 | Msa0364800:CDS | 45.0% | |
| GTTCTTCGTGACAACATCCA+GGG | - | chr3_1:58301691-58301710 | Msa0364800:CDS | 45.0% | |
| GGAAGAACGCTCTATGGTTT+CGG | - | chr3_1:58301910-58301929 | Msa0364800:CDS | 45.0% | |
| ACTTGGAGTACGAATGTGAC+TGG | + | chr3_1:58302820-58302839 | None:intergenic | 45.0% | |
| AAATGAGGTGAGGCCTAGAA+AGG | - | chr3_1:58303108-58303127 | Msa0364800:intron | 45.0% | |
| AAACCCCTCCTAACCTTTCT+AGG | + | chr3_1:58303124-58303143 | None:intergenic | 45.0% | |
| CGTGGAATTGGAGTCTTAGT+AGG | - | chr3_1:58303257-58303276 | Msa0364800:intron | 45.0% | |
| !!! | TATTTTAAGGTAGCCGTGGG+TGG | - | chr3_1:58303333-58303352 | Msa0364800:intron | 45.0% |
| !!! | ATTTTAAGGTAGCCGTGGGT+GGG | - | chr3_1:58303334-58303353 | Msa0364800:intron | 45.0% |
| ! | AGAAAAGTGTGGTTCCTGTG+CGG | + | chr3_1:58303493-58303512 | None:intergenic | 45.0% |
| TTGTATTGCTTGCCCTTTGG+TGG | - | chr3_1:58303513-58303532 | Msa0364800:intron | 45.0% | |
| GGAACTGTCACGCACAAAAT+TGG | - | chr3_1:58303643-58303662 | Msa0364800:intron | 45.0% | |
| ATTCCTGACTCAAGCCATTG+TGG | - | chr3_1:58303682-58303701 | Msa0364800:intron | 45.0% | |
| ATACCACAATGGCTTGAGTC+AGG | + | chr3_1:58303688-58303707 | None:intergenic | 45.0% | |
| ! | GGAATGCTTGTTTCTCAGTG+AGG | + | chr3_1:58303949-58303968 | None:intergenic | 45.0% |
| TCCAAAGGTTGACTAATCCC+AGG | - | chr3_1:58304092-58304111 | Msa0364800:intron | 45.0% | |
| !! | TCCTGGGATTAGTCAACCTT+TGG | + | chr3_1:58304096-58304115 | None:intergenic | 45.0% |
| TATGTAGTCTAGTCCACGTC+AGG | + | chr3_1:58304766-58304785 | None:intergenic | 45.0% | |
| CAGTTAGTAGGAACAACGCA+TGG | - | chr3_1:58304811-58304830 | Msa0364800:intron | 45.0% | |
| GCATGGTAATATGCAAGGTC+CGG | - | chr3_1:58304828-58304847 | Msa0364800:intron | 45.0% | |
| CATGGTAATATGCAAGGTCC+GGG | - | chr3_1:58304829-58304848 | Msa0364800:intron | 45.0% | |
| ATGGTAATATGCAAGGTCCG+GGG | - | chr3_1:58304830-58304849 | Msa0364800:intron | 45.0% | |
| !!! | TCTTTTTTTTGTGGTGGCCG+GGG | + | chr3_1:58304862-58304881 | None:intergenic | 45.0% |
| !!! | GTCTTTTTTTTGTGGTGGCC+GGG | + | chr3_1:58304863-58304882 | None:intergenic | 45.0% |
| AAGCCGCGAAGAAAGCAAAT+CGG | - | chr3_1:58305061-58305080 | Msa0364800:intron | 45.0% | |
| TCCGCGTGTACTTACGAAAA+TGG | + | chr3_1:58305119-58305138 | None:intergenic | 45.0% | |
| CTCTTGAAAATGTCAGGTCG+TGG | - | chr3_1:58305331-58305350 | Msa0364800:intron | 45.0% | |
| GAAAATGTCAGGTCGTGGAA+AGG | - | chr3_1:58305336-58305355 | Msa0364800:intron | 45.0% | |
| GGTGGTGTGAAAAGAATCAG+TGG | - | chr3_1:58305463-58305482 | Msa0364800:intron | 45.0% | |
| AGGCGTGTTGAAGATCTTCT+TGG | - | chr3_1:58305507-58305526 | Msa0364800:CDS | 45.0% | |
| AGCATAGACAACATCCATGG+CGG | + | chr3_1:58301878-58301897 | None:intergenic | 45.0% | |
| !! | GTCTATGCTTTGAAGAGGCA+AGG | - | chr3_1:58305601-58305620 | Msa0364800:CDS | 45.0% |
| GGAAGAACCCTCTATGGTTT+CGG | - | chr3_1:58305622-58305641 | Msa0364800:CDS | 45.0% | |
| TCAACCTCCGAAACCATAGA+GGG | + | chr3_1:58301920-58301939 | None:intergenic | 45.0% | |
| !! | AAATAATTATTGTTTATTTA+GGG | + | chr3_1:58304925-58304944 | None:intergenic | 5.0% |
| ! | AGGGAGGTGCAAAGAGACAT+AGG | - | chr3_1:58301665-58301684 | Msa0364800:CDS | 50.0% |
| GGTTCTTCGTGACAACATCC+AGG | - | chr3_1:58301690-58301709 | Msa0364800:CDS | 50.0% | |
| GGTGGTGTGAAGAGAATCAG+TGG | - | chr3_1:58301751-58301770 | Msa0364800:CDS | 50.0% | |
| TGACATACACTGAGCACGCA+AGG | - | chr3_1:58301839-58301858 | Msa0364800:CDS | 50.0% | |
| AGACAGGGAAGAACGCTCTA+TGG | - | chr3_1:58301904-58301923 | Msa0364800:CDS | 50.0% | |
| AGAACGCTCTATGGTTTCGG+AGG | - | chr3_1:58301913-58301932 | Msa0364800:CDS | 50.0% | |
| ! | AGTGTTGAATGCGGATGCAG+CGG | - | chr3_1:58302931-58302950 | Msa0364800:intron | 50.0% |
| AGGTGAGGCCTAGAAAGGTT+AGG | - | chr3_1:58303113-58303132 | Msa0364800:intron | 50.0% | |
| TGAGGCCTAGAAAGGTTAGG+AGG | - | chr3_1:58303116-58303135 | Msa0364800:intron | 50.0% | |
| GAGGCCTAGAAAGGTTAGGA+GGG | - | chr3_1:58303117-58303136 | Msa0364800:intron | 50.0% | |
| AGGCCTAGAAAGGTTAGGAG+GGG | - | chr3_1:58303118-58303137 | Msa0364800:intron | 50.0% | |
| ! | GTCTGGGCTGCTGTATTTTC+TGG | - | chr3_1:58303386-58303405 | Msa0364800:intron | 50.0% |
| ACTACGGGAACAGGCAACAA+CGG | + | chr3_1:58303539-58303558 | None:intergenic | 50.0% | |
| AACCATAGTCGCACAAGACG+AGG | + | chr3_1:58303563-58303582 | None:intergenic | 50.0% | |
| TTGCTTTCTTCGCGGCTTTG+CGG | + | chr3_1:58305059-58305078 | None:intergenic | 50.0% | |
| ! | GGTCCGATTTGCTTTCTTCG+CGG | + | chr3_1:58305067-58305086 | None:intergenic | 50.0% |
| CGAGAGCGGGATGAATAAGA+GGG | + | chr3_1:58305206-58305225 | None:intergenic | 50.0% | |
| ! | AGGGAGGTGCAAAGAGACAT+AGG | - | chr3_1:58301665-58301684 | Msa0364800:CDS | 50.0% |
| CAATCGACGAATGGCAGGTT+TGG | + | chr3_1:58305434-58305453 | None:intergenic | 50.0% | |
| CAAACCTGCCATTCGTCGAT+TGG | - | chr3_1:58305432-58305451 | Msa0364800:intron | 50.0% | |
| TCTTCTCGCCAATCGACGAA+TGG | + | chr3_1:58305443-58305462 | None:intergenic | 50.0% | |
| ! | ATTCGTCGATTGGCGAGAAG+AGG | - | chr3_1:58305442-58305461 | Msa0364800:intron | 50.0% |
| GAAGATCTTCAACACGCCTC+TGG | + | chr3_1:58305506-58305525 | None:intergenic | 50.0% | |
| AGGCAAGGAAGAACCCTCTA+TGG | - | chr3_1:58305616-58305635 | Msa0364800:CDS | 50.0% | |
| AGAACCCTCTATGGTTTCGG+AGG | - | chr3_1:58305625-58305644 | Msa0364800:CDS | 50.0% | |
| ATGTCAGGTCGTGGAAAGGG+GGG | - | chr3_1:58301628-58301647 | Msa0364800:CDS | 55.0% | |
| !! | TAGCAGGCTTGGTGATACCC+TGG | + | chr3_1:58301711-58301730 | None:intergenic | 55.0% |
| CAATCGGCGAATAGCAGGCT+TGG | + | chr3_1:58301722-58301741 | None:intergenic | 55.0% | |
| CAAGCCTGCTATTCGCCGAT+TGG | - | chr3_1:58301720-58301739 | Msa0364800:CDS | 55.0% | |
| ! | ATTCGCCGATTGGCGAGAAG+AGG | - | chr3_1:58301730-58301749 | Msa0364800:CDS | 55.0% |
| CACCACCTCTTCTCGCCAAT+CGG | + | chr3_1:58301738-58301757 | None:intergenic | 55.0% | |
| CATACACTGAGCACGCAAGG+AGG | - | chr3_1:58301842-58301861 | Msa0364800:CDS | 55.0% | |
| TGAGCACGCAAGGAGGAAGA+CGG | - | chr3_1:58301849-58301868 | Msa0364800:CDS | 55.0% | |
| AGGCAACAACGGCCACCAAA+GGG | + | chr3_1:58303528-58303547 | None:intergenic | 55.0% | |
| ! | TCGCACAAGACGAGGCACTA+CGG | + | chr3_1:58303555-58303574 | None:intergenic | 55.0% |
| TGCCTCGTCTTGTGCGACTA+TGG | - | chr3_1:58303558-58303577 | Msa0364800:intron | 55.0% | |
| AGTCTAGTCCACGTCAGGTC+AGG | + | chr3_1:58304761-58304780 | None:intergenic | 55.0% | |
| ! | GGCGGAATGCCGTCTACTTT+TGG | + | chr3_1:58305000-58305019 | None:intergenic | 55.0% |
| GCGAGAGCGGGATGAATAAG+AGG | + | chr3_1:58305207-58305226 | None:intergenic | 55.0% | |
| !! | TGGTAGTTGGTAGCGAGAGC+GGG | + | chr3_1:58305219-58305238 | None:intergenic | 55.0% |
| !! | GTGGTAGTTGGTAGCGAGAG+CGG | + | chr3_1:58305220-58305239 | None:intergenic | 55.0% |
| ATGTCAGGTCGTGGAAAGGG+AGG | - | chr3_1:58301628-58301647 | Msa0364800:CDS | 55.0% | |
| AGGTCGTGGAAAGGGAGGTA+AGG | - | chr3_1:58305345-58305364 | Msa0364800:intron | 55.0% | |
| GGTCGTGGAAAGGGAGGTAA+GGG | - | chr3_1:58305346-58305365 | Msa0364800:intron | 55.0% | |
| TGGAAAGGGAGGTAAGGGTC+TGG | - | chr3_1:58305351-58305370 | Msa0364800:intron | 55.0% | |
| GGAAAGGGAGGTAAGGGTCT+GGG | - | chr3_1:58305352-58305371 | Msa0364800:intron | 55.0% | |
| GGAGGTAAGGGTCTGGGAAA+GGG | - | chr3_1:58305358-58305377 | Msa0364800:intron | 55.0% | |
| !! | TGGCAGGTTTGGTGATACCC+TGG | + | chr3_1:58305423-58305442 | None:intergenic | 55.0% |
| GAGAAAGACAGTCACCGCCA+TGG | - | chr3_1:58305573-58305592 | Msa0364800:CDS | 55.0% | |
| AGGTCGTGGAAAGGGGGGTA+AGG | - | chr3_1:58301633-58301652 | Msa0364800:CDS | 60.0% | |
| GGTCGTGGAAAGGGGGGTAA+GGG | - | chr3_1:58301634-58301653 | Msa0364800:CDS | 60.0% | |
| TGGAAAGGGGGGTAAGGGTC+TGG | - | chr3_1:58301639-58301658 | Msa0364800:CDS | 60.0% | |
| GGAAAGGGGGGTAAGGGTCT+GGG | - | chr3_1:58301640-58301659 | Msa0364800:CDS | 60.0% | |
| GGGGGTAAGGGTCTGGGAAA+GGG | - | chr3_1:58301646-58301665 | Msa0364800:CDS | 60.0% | |
| GGTAAGGGTCTGGGAAAGGG+AGG | - | chr3_1:58301649-58301668 | Msa0364800:CDS | 60.0% | |
| CTCGCCAATCGGCGAATAGC+AGG | + | chr3_1:58301727-58301746 | None:intergenic | 60.0% | |
| GAGGAAGACGGTGACAGCCA+TGG | - | chr3_1:58301861-58301880 | Msa0364800:CDS | 60.0% | |
| !! | TGGTGCTGTTGGTGCGTGTC+TGG | - | chr3_1:58303369-58303388 | Msa0364800:intron | 60.0% |
| !! | GGTGCTGTTGGTGCGTGTCT+GGG | - | chr3_1:58303370-58303389 | Msa0364800:intron | 60.0% |
| GCCACACAGCACAGCTGGAA+CGG | + | chr3_1:58303466-58303485 | None:intergenic | 60.0% | |
| CAGGCAACAACGGCCACCAA+AGG | + | chr3_1:58303529-58303548 | None:intergenic | 60.0% | |
| ! | AGACGAGGCACTACGGGAAC+AGG | + | chr3_1:58303548-58303567 | None:intergenic | 60.0% |
| ! | CGCACAAGACGAGGCACTAC+GGG | + | chr3_1:58303554-58303573 | None:intergenic | 60.0% |
| AAGTCGGACCTGACCTGACG+TGG | - | chr3_1:58304750-58304769 | Msa0364800:intron | 60.0% | |
| AAGGTCCGGGGTTCAAACCC+CGG | - | chr3_1:58304842-58304861 | Msa0364800:intron | 60.0% | |
| GGGAGGTAAGGGTCTGGGAA+AGG | - | chr3_1:58305357-58305376 | Msa0364800:intron | 60.0% | |
| GGTAAGGGTCTGGGAAAGGG+AGG | - | chr3_1:58301649-58301668 | Msa0364800:CDS | 60.0% | |
| CTCGCCAATCGACGAATGGC+AGG | + | chr3_1:58305439-58305458 | None:intergenic | 60.0% | |
| ! | CGTCGATTGGCGAGAAGAGG+TGG | - | chr3_1:58305445-58305464 | Msa0364800:intron | 60.0% |
| GGGGGGTAAGGGTCTGGGAA+AGG | - | chr3_1:58301645-58301664 | Msa0364800:CDS | 65.0% | |
| ! | CGCCGATTGGCGAGAAGAGG+TGG | - | chr3_1:58301733-58301752 | Msa0364800:CDS | 65.0% |
| GCCGTTCCAGCTGTGCTGTG+TGG | - | chr3_1:58303462-58303481 | Msa0364800:intron | 65.0% | |
| GCTGTGCCACACAGCACAGC+TGG | + | chr3_1:58303471-58303490 | None:intergenic | 65.0% | |
| GCTGTGTGGCACAGCCGCAC+AGG | - | chr3_1:58303476-58303495 | Msa0364800:intron | 70.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | + | chr3_1:58304850-58304869 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 58301628 | 58305651 | 58301628 | ID=Msa0364800;Name=Msa0364800 |
| chr3_1 | mRNA | 58301628 | 58305651 | 58301628 | ID=Msa0364800-mRNA-1;Parent=Msa0364800;Name=Msa0364800-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|2|0|157 |
| chr3_1 | exon | 58305483 | 58305651 | 58305483 | ID=Msa0364800-mRNA-1:exon:11048;Parent=Msa0364800-mRNA-1 |
| chr3_1 | exon | 58301628 | 58301932 | 58301628 | ID=Msa0364800-mRNA-1:exon:11047;Parent=Msa0364800-mRNA-1 |
| chr3_1 | CDS | 58305483 | 58305651 | 58305483 | ID=Msa0364800-mRNA-1:cds;Parent=Msa0364800-mRNA-1 |
| chr3_1 | CDS | 58301628 | 58301932 | 58301628 | ID=Msa0364800-mRNA-1:cds;Parent=Msa0364800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
