Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0365310 | KEH34295.1 | 48.940 | 519 | 129 | 11 | 41 | 480 | 1 | 462 | 7.79e-112 | 367 |
Msa0365310 | KEH34295.1 | 51.235 | 162 | 47 | 5 | 471 | 600 | 310 | 471 | 7.54e-29 | 134 |
Msa0365310 | KEH34295.1 | 71.947 | 524 | 90 | 8 | 591 | 1113 | 4 | 471 | 0.0 | 692 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0365310 | sp|Q9LUZ4|C3H66_ARATH | 41.667 | 420 | 213 | 14 | 685 | 1089 | 186 | 588 | 1.17e-78 | 273 |
Msa0365310 | sp|Q9LUZ4|C3H66_ARATH | 34.959 | 369 | 173 | 14 | 92 | 434 | 208 | 535 | 1.15e-45 | 178 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0365310 | A0A072V7Z8 | 48.940 | 519 | 129 | 11 | 41 | 480 | 1 | 462 | 3.72e-112 | 367 |
Msa0365310 | A0A072V7Z8 | 51.235 | 162 | 47 | 5 | 471 | 600 | 310 | 471 | 3.60e-29 | 134 |
Msa0365310 | A0A072V7Z8 | 71.947 | 524 | 90 | 8 | 591 | 1113 | 4 | 471 | 0.0 | 692 |
Gene ID | Type | Classification |
---|---|---|
Msa0365310 | TF | C3H |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0365310 | Msa0457320 | 0.897047 | 2.052917e-76 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0365310 | MtrunA17_Chr3g0105121 | 70.886 | 395 | 64 | 6 | 85 | 467 | 1 | 356 | 8.42e-178 | 524 |
Msa0365310 | MtrunA17_Chr3g0105121 | 57.672 | 378 | 130 | 5 | 707 | 1083 | 8 | 356 | 4.06e-131 | 403 |
Msa0365310 | MtrunA17_Chr3g0105121 | 47.500 | 120 | 38 | 4 | 476 | 586 | 246 | 349 | 3.31e-16 | 81.6 |
Msa0365310 | MtrunA17_Chr1g0187591 | 53.734 | 482 | 156 | 7 | 666 | 1095 | 187 | 653 | 2.30e-136 | 427 |
Msa0365310 | MtrunA17_Chr1g0187591 | 46.212 | 396 | 130 | 9 | 78 | 434 | 187 | 538 | 5.12e-82 | 281 |
Msa0365310 | MtrunA17_Chr1g0187591 | 77.228 | 101 | 23 | 0 | 478 | 578 | 467 | 567 | 4.01e-39 | 155 |
Msa0365310 | MtrunA17_Chr3g0105151 | 80.000 | 245 | 41 | 1 | 869 | 1113 | 1 | 237 | 9.41e-130 | 394 |
Msa0365310 | MtrunA17_Chr3g0105151 | 59.211 | 228 | 72 | 2 | 274 | 480 | 1 | 228 | 1.17e-70 | 235 |
Msa0365310 | MtrunA17_Chr3g0105151 | 51.235 | 162 | 47 | 5 | 471 | 600 | 76 | 237 | 8.25e-35 | 133 |
Msa0365310 | MtrunA17_Chr3g0105131 | 53.218 | 404 | 155 | 8 | 664 | 1067 | 136 | 505 | 9.24e-111 | 355 |
Msa0365310 | MtrunA17_Chr3g0105131 | 44.709 | 378 | 140 | 11 | 92 | 451 | 179 | 505 | 6.29e-66 | 231 |
Msa0365310 | MtrunA17_Chr3g0105131 | 79.439 | 107 | 20 | 1 | 476 | 582 | 401 | 505 | 1.60e-42 | 163 |
Msa0365310 | MtrunA17_Chr5g0430211 | 43.110 | 508 | 207 | 17 | 674 | 1113 | 197 | 690 | 1.79e-97 | 325 |
Msa0365310 | MtrunA17_Chr5g0430211 | 38.131 | 396 | 176 | 14 | 92 | 434 | 229 | 608 | 2.19e-56 | 208 |
Msa0365310 | MtrunA17_Chr5g0430211 | 38.686 | 137 | 57 | 4 | 477 | 597 | 525 | 650 | 3.07e-11 | 67.8 |
Msa0365310 | MtrunA17_Chr3g0105141 | 89.655 | 145 | 15 | 0 | 673 | 817 | 1 | 145 | 1.45e-91 | 290 |
Msa0365310 | MtrunA17_Chr3g0105141 | 65.546 | 119 | 37 | 2 | 92 | 207 | 35 | 152 | 1.70e-45 | 161 |
Msa0365310 | MtrunA17_Chr3g0105101 | 54.153 | 301 | 106 | 4 | 652 | 952 | 133 | 401 | 1.71e-88 | 291 |
Msa0365310 | MtrunA17_Chr3g0105101 | 43.333 | 300 | 127 | 9 | 66 | 357 | 137 | 401 | 6.84e-55 | 196 |
Msa0365310 | MtrunA17_Chr5g0437251 | 40.795 | 478 | 208 | 15 | 687 | 1104 | 196 | 658 | 3.33e-85 | 291 |
Msa0365310 | MtrunA17_Chr5g0437251 | 34.321 | 405 | 182 | 13 | 92 | 436 | 216 | 596 | 9.74e-48 | 182 |
Msa0365310 | MtrunA17_Chr5g0437251 | 44.828 | 87 | 47 | 1 | 501 | 586 | 545 | 631 | 1.29e-12 | 72.0 |
Msa0365310 | MtrunA17_Chr3g0113651 | 38.761 | 436 | 173 | 16 | 672 | 1085 | 122 | 485 | 1.19e-68 | 239 |
Msa0365310 | MtrunA17_Chr3g0113651 | 36.111 | 324 | 120 | 13 | 92 | 400 | 162 | 413 | 3.66e-43 | 165 |
Msa0365310 | MtrunA17_Chr7g0257831 | 35.714 | 462 | 211 | 14 | 685 | 1085 | 241 | 677 | 1.54e-62 | 227 |
Msa0365310 | MtrunA17_Chr7g0257831 | 38.545 | 275 | 120 | 10 | 92 | 342 | 263 | 512 | 6.91e-46 | 177 |
Msa0365310 | MtrunA17_Chr3g0088521 | 42.049 | 283 | 133 | 6 | 685 | 942 | 241 | 517 | 1.94e-59 | 218 |
Msa0365310 | MtrunA17_Chr3g0088521 | 33.803 | 355 | 175 | 10 | 92 | 409 | 263 | 594 | 5.82e-42 | 165 |
Msa0365310 | MtrunA17_Chr1g0171151 | 37.591 | 274 | 149 | 6 | 685 | 942 | 221 | 488 | 5.42e-49 | 184 |
Msa0365310 | MtrunA17_Chr1g0171151 | 41.772 | 158 | 72 | 3 | 92 | 230 | 243 | 399 | 2.67e-34 | 140 |
Msa0365310 | MtrunA17_Chr3g0092221 | 49.153 | 177 | 84 | 4 | 685 | 860 | 137 | 308 | 1.71e-47 | 175 |
Msa0365310 | MtrunA17_Chr3g0092221 | 43.750 | 176 | 74 | 7 | 92 | 245 | 157 | 329 | 8.62e-37 | 144 |
Msa0365310 | MtrunA17_Chr3g0092171 | 50.588 | 170 | 76 | 2 | 686 | 855 | 253 | 414 | 3.20e-45 | 171 |
Msa0365310 | MtrunA17_Chr3g0092171 | 47.712 | 153 | 67 | 4 | 92 | 232 | 274 | 425 | 4.28e-36 | 144 |
Msa0365310 | MtrunA17_Chr8g0389561 | 51.562 | 128 | 61 | 1 | 704 | 831 | 77 | 203 | 1.30e-39 | 151 |
Msa0365310 | MtrunA17_Chr8g0389561 | 51.587 | 126 | 58 | 2 | 91 | 214 | 79 | 203 | 9.37e-37 | 143 |
Msa0365310 | MtrunA17_Chr6g0487481 | 55.963 | 109 | 47 | 1 | 704 | 812 | 99 | 206 | 1.35e-39 | 151 |
Msa0365310 | MtrunA17_Chr6g0487481 | 54.286 | 105 | 45 | 2 | 92 | 194 | 102 | 205 | 1.15e-32 | 131 |
Msa0365310 | MtrunA17_Chr3g0135351 | 38.636 | 220 | 115 | 8 | 698 | 908 | 43 | 251 | 5.83e-39 | 146 |
Msa0365310 | MtrunA17_Chr3g0135351 | 53.846 | 117 | 52 | 1 | 92 | 206 | 52 | 168 | 9.70e-37 | 140 |
Msa0365310 | MtrunA17_Chr2g0324781 | 55.357 | 112 | 49 | 1 | 708 | 819 | 77 | 187 | 7.33e-39 | 150 |
Msa0365310 | MtrunA17_Chr2g0324781 | 50.893 | 112 | 52 | 2 | 93 | 202 | 77 | 187 | 3.79e-30 | 124 |
Msa0365310 | MtrunA17_Chr4g0040391 | 55.046 | 109 | 48 | 1 | 704 | 812 | 56 | 163 | 7.95e-37 | 141 |
Msa0365310 | MtrunA17_Chr4g0040391 | 48.571 | 105 | 51 | 2 | 92 | 194 | 59 | 162 | 8.87e-28 | 115 |
Msa0365310 | MtrunA17_Chr3g0105111 | 50.435 | 115 | 39 | 4 | 999 | 1113 | 1 | 97 | 2.09e-20 | 87.8 |
Msa0365310 | MtrunA17_Chr3g0105111 | 48.673 | 113 | 18 | 3 | 520 | 605 | 3 | 102 | 7.85e-20 | 85.9 |
Msa0365310 | MtrunA17_Chr3g0105111 | 54.545 | 77 | 28 | 3 | 406 | 477 | 5 | 79 | 3.91e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0365310 | AT5G58620.1 | 41.667 | 420 | 213 | 14 | 685 | 1089 | 186 | 588 | 1.19e-79 | 273 |
Msa0365310 | AT5G58620.1 | 34.959 | 369 | 173 | 14 | 92 | 434 | 208 | 535 | 1.17e-46 | 178 |
Msa0365310 | AT2G40140.2 | 38.958 | 403 | 202 | 11 | 690 | 1088 | 196 | 558 | 1.23e-70 | 248 |
Msa0365310 | AT2G40140.2 | 39.286 | 280 | 122 | 8 | 92 | 365 | 213 | 450 | 9.43e-47 | 178 |
Msa0365310 | AT2G40140.1 | 38.958 | 403 | 202 | 11 | 690 | 1088 | 196 | 558 | 1.23e-70 | 248 |
Msa0365310 | AT2G40140.1 | 39.286 | 280 | 122 | 8 | 92 | 365 | 213 | 450 | 9.43e-47 | 178 |
Msa0365310 | AT3G55980.1 | 39.604 | 404 | 187 | 16 | 690 | 1085 | 193 | 547 | 3.50e-68 | 240 |
Msa0365310 | AT3G55980.1 | 34.659 | 352 | 165 | 13 | 92 | 436 | 210 | 503 | 6.36e-42 | 163 |
Msa0365310 | AT3G55980.2 | 39.604 | 404 | 187 | 16 | 690 | 1085 | 260 | 614 | 9.13e-68 | 241 |
Msa0365310 | AT3G55980.2 | 34.659 | 352 | 165 | 13 | 92 | 436 | 277 | 570 | 1.30e-41 | 163 |
Msa0365310 | AT2G41900.1 | 46.269 | 268 | 121 | 6 | 687 | 942 | 240 | 496 | 8.29e-64 | 231 |
Msa0365310 | AT2G41900.1 | 40.154 | 259 | 120 | 6 | 92 | 342 | 260 | 491 | 1.69e-47 | 182 |
Msa0365310 | AT5G12850.1 | 36.058 | 416 | 204 | 16 | 685 | 1049 | 234 | 638 | 7.76e-61 | 222 |
Msa0365310 | AT5G12850.1 | 38.346 | 266 | 134 | 7 | 92 | 346 | 256 | 502 | 2.49e-43 | 169 |
Msa0365310 | AT5G07500.1 | 56.557 | 122 | 52 | 1 | 690 | 811 | 34 | 154 | 1.35e-45 | 165 |
Msa0365310 | AT5G07500.1 | 51.429 | 105 | 48 | 2 | 92 | 194 | 51 | 154 | 1.44e-31 | 124 |
Msa0365310 | AT2G25900.2 | 60.000 | 110 | 43 | 1 | 704 | 813 | 86 | 194 | 8.18e-42 | 156 |
Msa0365310 | AT2G25900.2 | 48.819 | 127 | 62 | 2 | 92 | 216 | 89 | 214 | 8.60e-35 | 136 |
Msa0365310 | AT2G25900.1 | 60.000 | 110 | 43 | 1 | 704 | 813 | 86 | 194 | 8.18e-42 | 156 |
Msa0365310 | AT2G25900.1 | 48.819 | 127 | 62 | 2 | 92 | 216 | 89 | 214 | 8.60e-35 | 136 |
Msa0365310 | AT2G19810.1 | 47.682 | 151 | 63 | 3 | 695 | 845 | 65 | 199 | 6.88e-41 | 155 |
Msa0365310 | AT2G19810.1 | 51.402 | 107 | 49 | 2 | 92 | 196 | 77 | 182 | 2.23e-31 | 127 |
Msa0365310 | AT4G29190.1 | 54.701 | 117 | 52 | 1 | 697 | 813 | 68 | 183 | 2.54e-40 | 153 |
Msa0365310 | AT4G29190.1 | 43.919 | 148 | 80 | 2 | 92 | 237 | 78 | 224 | 9.97e-34 | 134 |
Msa0365310 | AT1G03790.1 | 51.538 | 130 | 58 | 3 | 701 | 826 | 75 | 203 | 8.49e-38 | 147 |
Msa0365310 | AT1G03790.1 | 46.099 | 141 | 68 | 2 | 92 | 230 | 81 | 215 | 1.22e-32 | 132 |
Msa0365310 | AT5G44260.1 | 54.955 | 111 | 48 | 2 | 704 | 813 | 56 | 165 | 2.94e-37 | 145 |
Msa0365310 | AT5G44260.1 | 46.970 | 132 | 65 | 2 | 67 | 196 | 37 | 165 | 1.37e-32 | 131 |
Find 257 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTAACCTTGAAGGCTATTT+TGG | 0.072421 | 3_1:+59254220 | Msa0365310:CDS |
AAATGTCCCTTTGCTCATTC+TGG | 0.151241 | 3_1:+59258402 | Msa0365310:CDS |
GCCTTCTACTTTCTCTGATT+GGG | 0.197083 | 3_1:+59256487 | Msa0365310:CDS |
TATATATTACAGATGAATTT+AGG | 0.242480 | 3_1:+59258322 | Msa0365310:CDS |
ATGAGGAGATCTTATTCTTT+TGG | 0.264893 | 3_1:+59256563 | Msa0365310:CDS |
TTTCTAAAACCTTCAAGTTT+TGG | 0.275697 | 3_1:+59252874 | Msa0365310:CDS |
TCATATCTTGAATTCATAAA+TGG | 0.281986 | 3_1:-59259143 | None:intergenic |
CTTCTCCCTTGAGGCAATCT+TGG | 0.284448 | 3_1:-59258200 | None:intergenic |
AGAACAAAGCTTTGCAATAA+TGG | 0.287623 | 3_1:+59258570 | Msa0365310:CDS |
AGCCTTCTACTTTCTCTGAT+TGG | 0.288690 | 3_1:+59256486 | Msa0365310:CDS |
AGAACAACGCTTTGCAATAA+TGG | 0.289322 | 3_1:+59253725 | Msa0365310:CDS |
ATGGAACATCGTCCGGATTA+TGG | 0.301107 | 3_1:-59259529 | None:intergenic |
CAGAAACAAGATTGCCTTAA+GGG | 0.313508 | 3_1:+59253437 | Msa0365310:intron |
GAAGAGTCAAATAGGCTTGC+AGG | 0.316240 | 3_1:+59258966 | Msa0365310:CDS |
CTTCTACTGCCTTCTCTGAT+TGG | 0.322323 | 3_1:+59259261 | Msa0365310:CDS |
CATTATTAAGCCAGGAATCT+TGG | 0.322794 | 3_1:+59259426 | Msa0365310:CDS |
TGAGTGGATCACAACAATTC+AGG | 0.326132 | 3_1:+59256366 | Msa0365310:CDS |
TCTAAACTTTCACCAAGTTT+TGG | 0.330983 | 3_1:+59257490 | Msa0365310:CDS |
TGATCCACTCACATTTGAAT+TGG | 0.333758 | 3_1:-59256354 | None:intergenic |
CTATTTGACTCTTCTATCAT+TGG | 0.335001 | 3_1:-59258957 | None:intergenic |
TCTAAACCTTCACCAGATTT+CGG | 0.347348 | 3_1:+59252650 | Msa0365310:CDS |
TAATCTTTCTTCTTAGTTTG+AGG | 0.353033 | 3_1:-59258261 | None:intergenic |
CTTTCCGATTCAAATGTGAT+TGG | 0.358142 | 3_1:+59259098 | Msa0365310:CDS |
TAGAGTAGCCACACAGTTCT+TGG | 0.359782 | 3_1:-59259070 | None:intergenic |
TGGTTAGATCACAACAGTTC+AGG | 0.360050 | 3_1:+59254335 | Msa0365310:CDS |
CAATGATAGAAGAGTCAAAT+AGG | 0.360308 | 3_1:+59258958 | Msa0365310:CDS |
TTCACCTGGTGTTTCTTCAA+TGG | 0.366013 | 3_1:+59258701 | Msa0365310:CDS |
CTACTTGACCCTTCTATCAT+TGG | 0.369851 | 3_1:-59254178 | None:intergenic |
TGCCGTTGATCTTCAACATC+TGG | 0.371528 | 3_1:-59256635 | None:intergenic |
GGACACAAATCAGCAACTTT+GGG | 0.371746 | 3_1:+59256313 | Msa0365310:CDS |
ATGCCGAATCCAATGATAGA+AGG | 0.372921 | 3_1:+59254169 | Msa0365310:CDS |
GAAGGGTCAAGTAGGCTTGC+TGG | 0.383335 | 3_1:+59254187 | Msa0365310:CDS |
AATATAGATCATGCAGTAAA+GGG | 0.387652 | 3_1:+59253645 | Msa0365310:CDS |
GGGACACAAATCAGCAACTT+TGG | 0.388854 | 3_1:+59256312 | Msa0365310:CDS |
GTGAGCTAACCCAAGATTCC+TGG | 0.390717 | 3_1:-59259436 | None:intergenic |
TGATCTAACCACATTAGAAT+TGG | 0.391379 | 3_1:-59254323 | None:intergenic |
GACCCTTCTATCATTGGATT+CGG | 0.397498 | 3_1:-59254172 | None:intergenic |
TGCTGCTCTCGATAAAGTTC+TGG | 0.399385 | 3_1:-59254405 | None:intergenic |
TCGATCCCTACCTGACATAA+AGG | 0.400178 | 3_1:+59258293 | Msa0365310:CDS |
AAACTAAGAAGAAAGATTAT+CGG | 0.403018 | 3_1:+59258265 | Msa0365310:CDS |
CCGTGATAGAAAATTAGAAT+TGG | 0.404340 | 3_1:+59254504 | Msa0365310:CDS |
TTTCAAAACCTGCTCCCTTA+AGG | 0.407360 | 3_1:-59253451 | None:intergenic |
AATGTCCCTTTGCTCATTCT+GGG | 0.408148 | 3_1:+59258403 | Msa0365310:CDS |
AAATAGCCTTCAAGGTTAGT+AGG | 0.408517 | 3_1:-59254217 | None:intergenic |
TTGGTGAAAGTTTAGAAACT+TGG | 0.411878 | 3_1:-59257483 | None:intergenic |
ATGACCCGAAAATGTCTTCA+TGG | 0.413038 | 3_1:-59259004 | None:intergenic |
TTCAACAGGCGAAGCTCCTC+GGG | 0.413095 | 3_1:-59258633 | None:intergenic |
AAGGAACCTGCACCGAAATC+TGG | 0.414383 | 3_1:-59252662 | None:intergenic |
CGAGGAGCTTCGCCTGTTGA+AGG | 0.414602 | 3_1:+59258635 | Msa0365310:CDS |
AAATGTCCCTTTGCTCATCA+TGG | 0.414986 | 3_1:+59253554 | Msa0365310:CDS |
AAAATGTCTTCATGGTTAGT+AGG | 0.419191 | 3_1:-59258996 | None:intergenic |
GCACATGGTGTTCTTGAGTC+CGG | 0.419484 | 3_1:+59253683 | Msa0365310:CDS |
ATTGCGGTTATGTTCATGAT+TGG | 0.421921 | 3_1:+59253528 | Msa0365310:CDS |
ATGACCCAAAATAGCCTTCA+AGG | 0.426670 | 3_1:-59254225 | None:intergenic |
ATCTGCTACCTTAGTTGCCA+TGG | 0.427041 | 3_1:+59256463 | Msa0365310:CDS |
ATTATTAAGCCAGGAATCTT+GGG | 0.427376 | 3_1:+59259427 | Msa0365310:CDS |
GGCCACATGGTTCTTTCTGC+AGG | 0.427795 | 3_1:-59254025 | None:intergenic |
CCCCAATCAGAGAAAGTAGA+AGG | 0.430324 | 3_1:-59256488 | None:intergenic |
TGCTCCATGTACAATTTCTC+TGG | 0.430560 | 3_1:-59256689 | None:intergenic |
ATGACGACATCTTATTCATT+CGG | 0.431815 | 3_1:+59259338 | Msa0365310:CDS |
CTCATTCTGGGGAAATTGCA+AGG | 0.434253 | 3_1:+59258415 | Msa0365310:CDS |
TGCCACATGGTTCCTCCTGC+AGG | 0.436089 | 3_1:-59258804 | None:intergenic |
CAACTTCAACATTACAATGT+TGG | 0.436387 | 3_1:-59254634 | None:intergenic |
AATTATATTGCTTCGGATCA+CGG | 0.437370 | 3_1:-59253592 | None:intergenic |
GAGCCTTCAACTGCCTTCTC+CGG | 0.438785 | 3_1:+59254472 | Msa0365310:CDS |
AACTGGTATAAGCCTTCAAC+AGG | 0.439127 | 3_1:-59258647 | None:intergenic |
TACATCAAATGTTGATGATC+AGG | 0.442359 | 3_1:+59254558 | Msa0365310:CDS |
TGCTAGAGATAATACTCATC+TGG | 0.443782 | 3_1:+59254120 | Msa0365310:CDS |
CAATCAGAGAAGGCAGTAGA+AGG | 0.448046 | 3_1:-59259260 | None:intergenic |
CAGCTGTAATAATATTTCTT+CGG | 0.448097 | 3_1:-59258447 | None:intergenic |
TTTCTGAAATTCATTACAAT+GGG | 0.449878 | 3_1:-59253624 | None:intergenic |
TCTATCACGGGAGCGCCAAC+CGG | 0.454780 | 3_1:-59254491 | None:intergenic |
CATCTGTAATTATATTGCTT+CGG | 0.456547 | 3_1:-59253599 | None:intergenic |
TTGCTCGGCATCTGAGGTGT+AGG | 0.459489 | 3_1:-59253986 | None:intergenic |
TTGCTCGGCATCTGAGGTGT+AGG | 0.459489 | 3_1:-59254076 | None:intergenic |
CGTGATAGAAAATTAGAATT+GGG | 0.460547 | 3_1:+59254505 | Msa0365310:CDS |
AACTGGTAGTAGCATTCAAC+GGG | 0.460601 | 3_1:-59253802 | None:intergenic |
AGATTCTACCTCAGTTGCAT+TGG | 0.462466 | 3_1:+59254450 | Msa0365310:CDS |
GCAGAAACAAGATTGCCTTA+AGG | 0.462483 | 3_1:+59253436 | Msa0365310:intron |
CCTTCACCAGATTTCGGTGC+AGG | 0.462782 | 3_1:+59252656 | Msa0365310:CDS |
ATGTGAAGGCAAAGCAGAAC+TGG | 0.464662 | 3_1:-59253819 | None:intergenic |
CAAGATTGCCTTAAGGGAGC+AGG | 0.465339 | 3_1:+59253443 | Msa0365310:CDS |
CTTCAACAGGCGAAGCTCCT+CGG | 0.466146 | 3_1:-59258634 | None:intergenic |
CTTCAACTGCCTTCTCCGGT+TGG | 0.466199 | 3_1:+59254476 | Msa0365310:CDS |
AATGCAACTGAGGTAGAATC+TGG | 0.470321 | 3_1:-59254448 | None:intergenic |
CAACCGGAGAAGGCAGTTGA+AGG | 0.471582 | 3_1:-59254475 | None:intergenic |
ACAATCTCTGACAGCAATGC+AGG | 0.473053 | 3_1:+59254252 | Msa0365310:CDS |
CACAATTGCTCCGGCTAGGA+TGG | 0.473777 | 3_1:-59259548 | None:intergenic |
TGTTGATCAGATTCCAATGT+TGG | 0.474488 | 3_1:-59259476 | None:intergenic |
AGAAGGCTCCATGGCAACTA+AGG | 0.474619 | 3_1:-59256471 | None:intergenic |
ACGGAAACTGCACCAAAACT+TGG | 0.475252 | 3_1:-59257502 | None:intergenic |
CAGAATGGATCATGCAGTAG+AGG | 0.475417 | 3_1:+59258489 | Msa0365310:CDS |
AAGAAGAACTTACATGAATA+CGG | 0.475940 | 3_1:-59257521 | None:intergenic |
AGGTGAAGGAAAAGCAGAAC+TGG | 0.477528 | 3_1:-59258664 | None:intergenic |
CCTTCTACTTTCTCTGATTG+GGG | 0.479569 | 3_1:+59256488 | Msa0365310:CDS |
AAATATAGATCATGCAGTAA+AGG | 0.479750 | 3_1:+59253644 | Msa0365310:CDS |
CATTTCATTGAGTTTATCAC+CGG | 0.482092 | 3_1:-59259318 | None:intergenic |
GGCTAGGATGGAACATCGTC+CGG | 0.482886 | 3_1:-59259536 | None:intergenic |
GGCAAAGACGAAACCGCGTC+CGG | 0.483229 | 3_1:-59256668 | None:intergenic |
CAAGATATGATGCCCTTTCG+AGG | 0.483484 | 3_1:+59254377 | Msa0365310:CDS |
GGCCACATGGTTCTTCCTGC+AGG | 0.483695 | 3_1:-59253935 | None:intergenic |
GAATTATTCATTATTAAGCC+AGG | 0.489175 | 3_1:+59259418 | Msa0365310:CDS |
ATTTCTGAAATTCATTACAA+TGG | 0.490595 | 3_1:-59253625 | None:intergenic |
CAAAGTGAAGCTTTGCTCAT+GGG | 0.492005 | 3_1:+59258356 | Msa0365310:CDS |
CCACTGATAGAAAGGTAGAT+TGG | 0.492569 | 3_1:+59259288 | Msa0365310:CDS |
TTGCTCGGCATCTGAAGTGT+AGG | 0.492953 | 3_1:-59258855 | None:intergenic |
GGTTAGATCACAACAGTTCA+GGG | 0.493239 | 3_1:+59254336 | Msa0365310:CDS |
ACGGGAGCGCCAACCGGAGA+AGG | 0.494199 | 3_1:-59254485 | None:intergenic |
TGATCCAATCACATTTGAAT+CGG | 0.499162 | 3_1:-59259102 | None:intergenic |
AATCTTCGTCGACACTGCCT+TGG | 0.499906 | 3_1:+59258760 | Msa0365310:CDS |
GTCCAAGGCGGCATCGATGA+AGG | 0.500707 | 3_1:-59253893 | None:intergenic |
TCAAAGTGAAGCTTTGCTCA+TGG | 0.502823 | 3_1:+59258355 | Msa0365310:CDS |
AATCTGTTGCTCGGCATCTG+AGG | 0.505565 | 3_1:-59254082 | None:intergenic |
AATAATATTTCTTCGGATCA+CGG | 0.506985 | 3_1:-59258440 | None:intergenic |
AATGTCCCTTTGCTCATCAT+GGG | 0.509346 | 3_1:+59253555 | Msa0365310:CDS |
TGCTTCGCTTGATAAAGCTC+TGG | 0.511329 | 3_1:-59259184 | None:intergenic |
TGAGGTAGAATCTGGAAGCT+TGG | 0.511466 | 3_1:-59254440 | None:intergenic |
TCATCGATACAATCTTCAAA+AGG | 0.511992 | 3_1:+59259023 | Msa0365310:CDS |
TGCCTTCATCGATGCCGCCT+TGG | 0.512659 | 3_1:+59253891 | Msa0365310:CDS |
GCTCTGGCTCCACTTCGAAA+TGG | 0.512667 | 3_1:-59259168 | None:intergenic |
TATATCCTATCCTTTATGTC+AGG | 0.513817 | 3_1:-59258303 | None:intergenic |
TCAACTGCAATGCCATAATC+CGG | 0.513945 | 3_1:+59259517 | Msa0365310:CDS |
ATTGAGTTCATCACCGCGGA+TGG | 0.514897 | 3_1:-59256537 | None:intergenic |
GAAACAGCACCAAAACTTGA+AGG | 0.516363 | 3_1:-59252883 | None:intergenic |
CAAGGGAGAAGGTTTCGAAA+TGG | 0.520068 | 3_1:+59258212 | Msa0365310:CDS |
TATTGTCATGAATTTCAGAA+TGG | 0.523011 | 3_1:+59258474 | Msa0365310:CDS |
GGTGAATTTGAATTTGATGT+AGG | 0.523180 | 3_1:-59258684 | None:intergenic |
CAAGATTGCCTCAAGGGAGA+AGG | 0.523740 | 3_1:+59258201 | Msa0365310:CDS |
GCTTTATTGAGAGCAATAGC+GGG | 0.524886 | 3_1:+59256417 | Msa0365310:CDS |
TATTGCTCTCAATAAAGCTC+TGG | 0.525656 | 3_1:-59256412 | None:intergenic |
CAGAACCAAGATTGCCTCAA+GGG | 0.525928 | 3_1:+59258195 | Msa0365310:intron |
CACATTTGAATCGGAAAGGT+CGG | 0.526730 | 3_1:-59259093 | None:intergenic |
ACAATCTTCAAAAGGAATGC+TGG | 0.527301 | 3_1:+59259031 | Msa0365310:CDS |
GAGTGGATCACAACAATTCA+GGG | 0.527448 | 3_1:+59256367 | Msa0365310:CDS |
AATCTGTTGCTCGGCATCTG+AGG | 0.528491 | 3_1:-59253992 | None:intergenic |
CACATGGTGTTCTTGAGTCC+GGG | 0.529152 | 3_1:+59253684 | Msa0365310:CDS |
GTGAATCCTACTAACCTTGA+AGG | 0.531036 | 3_1:+59254211 | Msa0365310:CDS |
GATGGATTATTAAGATATGA+AGG | 0.531625 | 3_1:+59254580 | Msa0365310:CDS |
AAGGATATATCTGAAGTTGT+TGG | 0.532786 | 3_1:-59254291 | None:intergenic |
CTTTCCCCATGATGAGCAAA+GGG | 0.533381 | 3_1:-59253560 | None:intergenic |
TTGGTACTCCACTGATAGAA+AGG | 0.535177 | 3_1:+59259280 | Msa0365310:CDS |
TTGGGTTAGCTCACTTGTGA+AGG | 0.535289 | 3_1:+59259445 | Msa0365310:CDS |
AAACAAGGCAAAGGAAGAAG+TGG | 0.537567 | 3_1:-59252619 | None:intergenic |
TATGATATCAATCTGTTGCT+CGG | 0.538210 | 3_1:-59254001 | None:intergenic |
ATTATTAAGATATGAAGGTA+TGG | 0.540701 | 3_1:+59254585 | Msa0365310:CDS |
AGTTCTGGCTCTGCCTCGAA+AGG | 0.544056 | 3_1:-59254390 | None:intergenic |
GCTCTGGCTCCGTTTCGAAA+AGG | 0.548920 | 3_1:-59256396 | None:intergenic |
TAACCACATTAGAATTGGTA+AGG | 0.551193 | 3_1:-59254318 | None:intergenic |
TCAACGGCAATGCTATAATC+CGG | 0.551575 | 3_1:+59256649 | Msa0365310:CDS |
TGCTCGGCATCTGAGGTGTA+GGG | 0.552789 | 3_1:-59253985 | None:intergenic |
TGCTCGGCATCTGAGGTGTA+GGG | 0.552789 | 3_1:-59254075 | None:intergenic |
TGCTCGGCATCTGAAGTGTA+GGG | 0.552789 | 3_1:-59258854 | None:intergenic |
TTTGAATTGGAAAGATCAGA+AGG | 0.554204 | 3_1:-59256341 | None:intergenic |
CTTCTTTGCTCACAATCATG+AGG | 0.556333 | 3_1:+59253772 | Msa0365310:CDS |
TATGGTTAATGAACTTGTGA+AGG | 0.556348 | 3_1:+59254603 | Msa0365310:CDS |
CCTATCCTTTATGTCAGGTA+GGG | 0.557883 | 3_1:-59258298 | None:intergenic |
ATTTCCCCAGAATGAGCAAA+GGG | 0.558937 | 3_1:-59258408 | None:intergenic |
ATCGATGAAGGCAATGTGAA+AGG | 0.560883 | 3_1:-59253881 | None:intergenic |
TCTGCAACATCATCTCCTGC+AGG | 0.561276 | 3_1:+59258789 | Msa0365310:CDS |
AGCTTTATTGAGAGCAATAG+CGG | 0.562255 | 3_1:+59256416 | Msa0365310:CDS |
AGAATGGATCATGCAGTAGA+GGG | 0.565871 | 3_1:+59258490 | Msa0365310:CDS |
GCAGTATTCAATCTGTTGCT+CGG | 0.567984 | 3_1:-59254091 | None:intergenic |
TCACCTTACCAATTCTAATG+TGG | 0.568314 | 3_1:+59254315 | Msa0365310:CDS |
CACTAGCAACACTTCAACAA+TGG | 0.568642 | 3_1:+59254531 | Msa0365310:CDS |
GATGTTGCAGACGGAGTCCA+AGG | 0.569189 | 3_1:-59258777 | None:intergenic |
AAACATTGCTAGTATCGTCT+AGG | 0.570465 | 3_1:-59259364 | None:intergenic |
TTAGAATTGGTAAGGTGAGA+AGG | 0.571244 | 3_1:-59254310 | None:intergenic |
GGATACATTGCAGAAGCACT+TGG | 0.571506 | 3_1:-59253860 | None:intergenic |
CTTTCCAATTCAAATGTGAG+TGG | 0.571592 | 3_1:+59256350 | Msa0365310:CDS |
GATATTGCAGACGGTGTCCA+AGG | 0.573927 | 3_1:-59253908 | None:intergenic |
CCCCTGATGAAAATTTAGAC+TGG | 0.574361 | 3_1:+59256513 | Msa0365310:CDS |
ATCCAGATGTTGAAGATCAA+CGG | 0.576092 | 3_1:+59256633 | Msa0365310:CDS |
CCAATCTACCTTTCTATCAG+TGG | 0.576349 | 3_1:-59259288 | None:intergenic |
GTTTAGAAACTTGGAAAACA+AGG | 0.576632 | 3_1:-59257474 | None:intergenic |
TTTGAATTTGATGTAGGTGA+AGG | 0.577407 | 3_1:-59258678 | None:intergenic |
ATGGCAACTAAGGTAGCAGA+TGG | 0.578164 | 3_1:-59256461 | None:intergenic |
GCTTTCCCCATGATGAGCAA+AGG | 0.578685 | 3_1:-59253561 | None:intergenic |
CAATGATAGAAGGGTCAAGT+AGG | 0.578738 | 3_1:+59254179 | Msa0365310:CDS |
AAACAAGGCAAAGGAAGAAG+TGG | 0.581630 | 3_1:-59257459 | None:intergenic |
GGGATAATGCTCCTCATGAG+TGG | 0.582183 | 3_1:+59258376 | Msa0365310:CDS |
GATTGGATCACCACAACTCA+AGG | 0.586241 | 3_1:+59259115 | Msa0365310:CDS |
AATTCAACTGAGGTGGCAGA+AGG | 0.587216 | 3_1:-59259233 | None:intergenic |
TGCCGAATCCAATGATAGAA+GGG | 0.587494 | 3_1:+59254170 | Msa0365310:CDS |
TCCTATCCTTTATGTCAGGT+AGG | 0.588316 | 3_1:-59258299 | None:intergenic |
GTACTAATCTGAGTCGGAGT+CGG | 0.588992 | 3_1:-59254046 | None:intergenic |
TTTCGAAACCTTCTCCCTTG+AGG | 0.589169 | 3_1:-59258209 | None:intergenic |
GTTCTGGCTCTGCCTCGAAA+GGG | 0.592388 | 3_1:-59254389 | None:intergenic |
AAGAAGAACTTACATGAGCA+AGG | 0.594088 | 3_1:-59252905 | None:intergenic |
CTGAGTCGGAGTCGGCCACA+TGG | 0.594746 | 3_1:-59253948 | None:intergenic |
GAACTGGTAGTAGCATTCAA+CGG | 0.595753 | 3_1:-59253803 | None:intergenic |
CAATCTCTGACAGCAATGCA+GGG | 0.596145 | 3_1:+59254253 | Msa0365310:CDS |
ATGTCCCTTTGCTCATTCTG+GGG | 0.596793 | 3_1:+59258404 | Msa0365310:CDS |
CAATCACATTTGAATCGGAA+AGG | 0.598213 | 3_1:-59259097 | None:intergenic |
GTACGATTCTGAGTCGGAGT+CGG | 0.598804 | 3_1:-59253956 | None:intergenic |
CTCTCTAGAAGACAGAAAGA+AGG | 0.598908 | 3_1:+59257885 | Msa0365310:CDS |
TCAAATGTTGATGATCAGGA+TGG | 0.604566 | 3_1:+59254562 | Msa0365310:CDS |
GTGATGAACTCAATAAAATG+AGG | 0.607267 | 3_1:+59256546 | Msa0365310:CDS |
CTGAGTCGGAGTCGGCCACA+TGG | 0.607724 | 3_1:-59254038 | None:intergenic |
AAACTTGGAAAACAAGGCAA+AGG | 0.608222 | 3_1:-59257468 | None:intergenic |
AAGGTAGATTGGTCTATCCC+CGG | 0.610542 | 3_1:+59259299 | Msa0365310:CDS |
AGAGAAAGTAGAAGGCTCCA+TGG | 0.611618 | 3_1:-59256480 | None:intergenic |
TCTGCAATATCATATCCTGC+AGG | 0.614316 | 3_1:+59253920 | Msa0365310:CDS |
CTTCTTTGCTCACAAACCCG+AGG | 0.614714 | 3_1:+59258617 | Msa0365310:CDS |
GAATCCATTGAAGAAACACC+AGG | 0.616564 | 3_1:-59258705 | None:intergenic |
TACTAGCAATGTTTCAACAA+TGG | 0.618393 | 3_1:+59259373 | Msa0365310:CDS |
ACTGTAGTACTAATCTGAGT+CGG | 0.618849 | 3_1:-59254052 | None:intergenic |
ACTGTAGTATGAATCTGAGT+CGG | 0.620110 | 3_1:-59258831 | None:intergenic |
AGGCTCTAATTCAACTGAGG+TGG | 0.620796 | 3_1:-59259240 | None:intergenic |
GAAGATTGTATCAAAGAAGA+CGG | 0.623170 | 3_1:-59258744 | None:intergenic |
GACACAAATCAGCAACTTTG+GGG | 0.625154 | 3_1:+59256314 | Msa0365310:CDS |
CCCTACCTGACATAAAGGAT+AGG | 0.627726 | 3_1:+59258298 | Msa0365310:CDS |
AAACTTGAGAAACAAGGCAA+AGG | 0.631794 | 3_1:-59252628 | None:intergenic |
ACATTCAAAGTGCGGCATTG+CGG | 0.631811 | 3_1:+59253512 | Msa0365310:CDS |
GTTTAGAAACTTGAGAAACA+AGG | 0.633244 | 3_1:-59252634 | None:intergenic |
ACAGAACCAAGATTGCCTCA+AGG | 0.634336 | 3_1:+59258194 | Msa0365310:intron |
TGATGTATACATTCAAAGTG+CGG | 0.634386 | 3_1:+59253504 | Msa0365310:CDS |
AATTTCCCCAGAATGAGCAA+AGG | 0.634761 | 3_1:-59258409 | None:intergenic |
GCAGGAGATGATGTTGCAGA+CGG | 0.635347 | 3_1:-59258786 | None:intergenic |
AGCTTTGTTCTGTATCGACT+AGG | 0.635835 | 3_1:-59258558 | None:intergenic |
CTTTATCGAGAGCAGCAGCA+TGG | 0.636540 | 3_1:+59254411 | Msa0365310:CDS |
AGTGGAGTACCAATCAGAGA+AGG | 0.636735 | 3_1:-59259270 | None:intergenic |
TTTGAATATAATGTATGTGA+AGG | 0.637611 | 3_1:-59253833 | None:intergenic |
GAGAAGCAGAAACAACATGT+AGG | 0.638851 | 3_1:+59258234 | Msa0365310:CDS |
ACATCAAATTCAAATTCACC+TGG | 0.640054 | 3_1:+59258687 | Msa0365310:CDS |
CCTGCACCGAAATCTGGTGA+AGG | 0.640526 | 3_1:-59252656 | None:intergenic |
GCAGGATATGATATTGCAGA+CGG | 0.643899 | 3_1:-59253917 | None:intergenic |
ATATAGATCATGCAGTAAAG+GGG | 0.646866 | 3_1:+59253646 | Msa0365310:CDS |
GAAGGATGATGATCCAACAT+TGG | 0.647091 | 3_1:+59259463 | Msa0365310:CDS |
CTGAGTCGGAGTCTGCCACA+TGG | 0.648294 | 3_1:-59258817 | None:intergenic |
TGAAGGCTCCAATGCAACTG+AGG | 0.649434 | 3_1:-59254458 | None:intergenic |
ATGTCCCTTTGCTCATCATG+GGG | 0.650802 | 3_1:+59253556 | Msa0365310:CDS |
AAGCAGAAACAACATGTAGG+TGG | 0.652560 | 3_1:+59258237 | Msa0365310:CDS |
ACTGTAGTACGATTCTGAGT+CGG | 0.653294 | 3_1:-59253962 | None:intergenic |
GATATGATGCCATTTCGAAG+TGG | 0.655473 | 3_1:+59259159 | Msa0365310:CDS |
GCAACATCATCTCCTGCAGG+AGG | 0.663953 | 3_1:+59258792 | Msa0365310:CDS |
GTATCGACTAGGATGCAGCC+CGG | 0.668994 | 3_1:-59253702 | None:intergenic |
GTATCGACTAGGATGCAGCC+CGG | 0.668994 | 3_1:-59258547 | None:intergenic |
AATTTAGACTGGTCCATCCG+CGG | 0.672142 | 3_1:+59256524 | Msa0365310:CDS |
GAATGGATCATGCAGTAGAG+GGG | 0.673342 | 3_1:+59258491 | Msa0365310:CDS |
ATTTCATTGAGTTTATCACC+GGG | 0.674570 | 3_1:-59259317 | None:intergenic |
AGCGTTGTTCTGTATCGACT+AGG | 0.678911 | 3_1:-59253713 | None:intergenic |
CTTTATCAAGCGAAGCAGCG+TGG | 0.679886 | 3_1:+59259190 | Msa0365310:CDS |
CTTTATTGAGAGCAATAGCG+GGG | 0.684685 | 3_1:+59256418 | Msa0365310:CDS |
AATCTCTGACAGCAATGCAG+GGG | 0.689149 | 3_1:+59254254 | Msa0365310:CDS |
AATGGATCAACCTTGAGTTG+TGG | 0.691978 | 3_1:-59259125 | None:intergenic |
AGAAGGCTCTAATTCAACTG+AGG | 0.697808 | 3_1:-59259243 | None:intergenic |
GTTAGATCACAACAGTTCAG+GGG | 0.713618 | 3_1:+59254337 | Msa0365310:CDS |
ATTGCAGACGGTGTCCAAGG+CGG | 0.715505 | 3_1:-59253905 | None:intergenic |
GATACATGTCAATATTCACA+TGG | 0.715825 | 3_1:+59258513 | Msa0365310:CDS |
CCTTACGAAACTCAGGACAA+GGG | 0.724349 | 3_1:+59256292 | Msa0365310:intron |
TTTCATTGAGTTTATCACCG+GGG | 0.737072 | 3_1:-59259316 | None:intergenic |
CTCCTGCAGGAGGAACCATG+TGG | 0.747414 | 3_1:+59258802 | Msa0365310:CDS |
GCAATGCTATAATCCGGACG+CGG | 0.749503 | 3_1:+59256655 | Msa0365310:CDS |
GATGAATGTCAATATGCACA+TGG | 0.762142 | 3_1:+59253668 | Msa0365310:CDS |
AATATGAACCAAGAACTGTG+TGG | 0.790957 | 3_1:+59259062 | Msa0365310:CDS |
ATCCTGCAGGAAGAACCATG+TGG | 0.814597 | 3_1:+59253933 | Msa0365310:CDS |
ATCCTGCAGAAAGAACCATG+TGG | 0.834161 | 3_1:+59254023 | Msa0365310:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATAGATCTTAATTAAATAT+AGG | + | chr3_1:59256828-59256847 | Msa0365310:intron | 10.0% |
!! | ATAAGAAAAATACATAAAGA+GGG | - | chr3_1:59252939-59252958 | None:intergenic | 15.0% |
!! | AATAAGAAAAATACATAAAG+AGG | - | chr3_1:59252940-59252959 | None:intergenic | 15.0% |
!!! | TATTTGGTTATTTGTTAATA+AGG | + | chr3_1:59253281-59253300 | Msa0365310:intron | 15.0% |
!! | TAAGAGATATTCATTATATT+TGG | + | chr3_1:59254745-59254764 | Msa0365310:intron | 15.0% |
!! | AAGAGATATTCATTATATTT+GGG | + | chr3_1:59254746-59254765 | Msa0365310:intron | 15.0% |
!! | ATAACAAAACAAAGAATTAA+GGG | - | chr3_1:59254825-59254844 | None:intergenic | 15.0% |
!! | AATAACAAAACAAAGAATTA+AGG | - | chr3_1:59254826-59254845 | None:intergenic | 15.0% |
!! | TTTAAACCTTATGAATAAAA+TGG | - | chr3_1:59255401-59255420 | None:intergenic | 15.0% |
!! | AAAAGAAAAAAAAAACAAAG+CGG | - | chr3_1:59255700-59255719 | None:intergenic | 15.0% |
!! | CAATGTTTAAACAAAAAAAA+AGG | - | chr3_1:59255820-59255839 | None:intergenic | 15.0% |
!!! | AATTTTGTATAATAATAGAG+AGG | + | chr3_1:59255961-59255980 | Msa0365310:intron | 15.0% |
!! | TTATATTGAAGAAAGAAATT+CGG | - | chr3_1:59257199-59257218 | None:intergenic | 15.0% |
!! | TATATATTACAGATGAATTT+AGG | + | chr3_1:59258322-59258341 | Msa0365310:CDS | 15.0% |
!! | TAAAAGAACTTACATGAATA+AGG | - | chr3_1:59252684-59252703 | None:intergenic | 20.0% |
!!! | ATTTTTCTTATTCTTCTTGA+TGG | + | chr3_1:59252948-59252967 | Msa0365310:intron | 20.0% |
!!! | TTTTTCTTATTCTTCTTGAT+GGG | + | chr3_1:59252949-59252968 | Msa0365310:intron | 20.0% |
!! | AAAACAATACAAACAATTCT+GGG | - | chr3_1:59253259-59253278 | None:intergenic | 20.0% |
!! | CTAAAAATAAGAACAAACAA+TGG | - | chr3_1:59253322-59253341 | None:intergenic | 20.0% |
!!! | TTTCTGAAATTCATTACAAT+GGG | - | chr3_1:59253627-59253646 | None:intergenic | 20.0% |
!!! | ATTTCTGAAATTCATTACAA+TGG | - | chr3_1:59253628-59253647 | None:intergenic | 20.0% |
!! | TTTGAATATAATGTATGTGA+AGG | - | chr3_1:59253836-59253855 | None:intergenic | 20.0% |
!! | ATTATTAAGATATGAAGGTA+TGG | + | chr3_1:59254585-59254604 | Msa0365310:CDS | 20.0% |
!! | CTTAAGTTAAAAAAAATCAC+AGG | - | chr3_1:59254729-59254748 | None:intergenic | 20.0% |
!! | AGAATTAAGGGAAAAAAAAA+TGG | - | chr3_1:59254813-59254832 | None:intergenic | 20.0% |
!! | ATCTATGAAACAATAATTCA+AGG | - | chr3_1:59254963-59254982 | None:intergenic | 20.0% |
!! | TGAATAAAATGGTATAAGAT+TGG | - | chr3_1:59255390-59255409 | None:intergenic | 20.0% |
!!! | CTTATACCATTTTATTCATA+AGG | + | chr3_1:59255392-59255411 | Msa0365310:intron | 20.0% |
!!! | TTTTTTCTTTTCTATTACGA+AGG | + | chr3_1:59255709-59255728 | Msa0365310:intron | 20.0% |
!! | AACATTGTTGCAAATTTATT+AGG | + | chr3_1:59255833-59255852 | Msa0365310:intron | 20.0% |
!! | TAATATGATACTAAACAGAA+AGG | - | chr3_1:59255914-59255933 | None:intergenic | 20.0% |
!! | AAGATATAGAGAGAAAAAAA+AGG | - | chr3_1:59256967-59256986 | None:intergenic | 20.0% |
!! | ATGTTAATACAGATTTAACA+AGG | - | chr3_1:59257002-59257021 | None:intergenic | 20.0% |
!!! | TGTACTTTTTTTATTCTTGA+TGG | + | chr3_1:59257717-59257736 | Msa0365310:intron | 20.0% |
!! | AAACTAAGAAGAAAGATTAT+CGG | + | chr3_1:59258265-59258284 | Msa0365310:CDS | 20.0% |
!! | TCATATCTTGAATTCATAAA+TGG | - | chr3_1:59259146-59259165 | None:intergenic | 20.0% |
!!! | TTTCTAAAACCTTCAAGTTT+TGG | + | chr3_1:59252874-59252893 | Msa0365310:CDS | 25.0% |
!!! | GAGATTACAATGTGTTTTTT+TGG | + | chr3_1:59253016-59253035 | Msa0365310:CDS | 25.0% |
!! | CTAAGAAAGTTTCTGAAAAA+TGG | + | chr3_1:59253042-59253061 | Msa0365310:CDS | 25.0% |
! | TTAGATTAAGAACACAACAA+TGG | - | chr3_1:59253170-59253189 | None:intergenic | 25.0% |
! | CAAAACAATACAAACAATTC+TGG | - | chr3_1:59253260-59253279 | None:intergenic | 25.0% |
!!! | GTTTGTATTGTTTTGCTATT+TGG | + | chr3_1:59253265-59253284 | Msa0365310:intron | 25.0% |
! | ACTAGGAAATTAACATGTAT+TGG | - | chr3_1:59253391-59253410 | None:intergenic | 25.0% |
! | CTACAAAATCATCAATAACT+AGG | - | chr3_1:59253408-59253427 | None:intergenic | 25.0% |
! | CATCTGTAATTATATTGCTT+CGG | - | chr3_1:59253602-59253621 | None:intergenic | 25.0% |
! | AAATATAGATCATGCAGTAA+AGG | + | chr3_1:59253644-59253663 | Msa0365310:CDS | 25.0% |
! | AATATAGATCATGCAGTAAA+GGG | + | chr3_1:59253645-59253664 | Msa0365310:CDS | 25.0% |
!! | CAATTCTAATTTTCTATCAC+GGG | - | chr3_1:59254506-59254525 | None:intergenic | 25.0% |
!! | CCAATTCTAATTTTCTATCA+CGG | - | chr3_1:59254507-59254526 | None:intergenic | 25.0% |
! | CGTGATAGAAAATTAGAATT+GGG | + | chr3_1:59254505-59254524 | Msa0365310:CDS | 25.0% |
!!! | GATGGATTATTAAGATATGA+AGG | + | chr3_1:59254580-59254599 | Msa0365310:CDS | 25.0% |
! | AATAACATGTATAACTGCTT+CGG | - | chr3_1:59254704-59254723 | None:intergenic | 25.0% |
! | GAATATGCATATGCTTATAA+TGG | + | chr3_1:59254877-59254896 | Msa0365310:intron | 25.0% |
!!! | ACATGTTTTAACCAAATGAA+GGG | - | chr3_1:59254927-59254946 | None:intergenic | 25.0% |
!!! | TACATGTTTTAACCAAATGA+AGG | - | chr3_1:59254928-59254947 | None:intergenic | 25.0% |
! | AATAATTCAAGGCATATGTT+TGG | - | chr3_1:59254952-59254971 | None:intergenic | 25.0% |
! | TAGTTACAAACCATAATTCA+AGG | - | chr3_1:59255188-59255207 | None:intergenic | 25.0% |
!!! | TTCATTTTCGCTTTTTATCA+AGG | + | chr3_1:59255224-59255243 | Msa0365310:intron | 25.0% |
!!! | AACCATTCTCTTTTTTTGAA+TGG | + | chr3_1:59255295-59255314 | Msa0365310:intron | 25.0% |
! | TTATCAATTGTTGAATGAAG+TGG | - | chr3_1:59255480-59255499 | None:intergenic | 25.0% |
!! | TTTGTCAAACTAGTTTGATT+AGG | + | chr3_1:59256038-59256057 | Msa0365310:intron | 25.0% |
!! | TTGTCAAACTAGTTTGATTA+GGG | + | chr3_1:59256039-59256058 | Msa0365310:intron | 25.0% |
! | TTTGATTAGGGAAAATGAAT+AGG | + | chr3_1:59256051-59256070 | Msa0365310:intron | 25.0% |
! | TTGATTAGGGAAAATGAATA+GGG | + | chr3_1:59256052-59256071 | Msa0365310:intron | 25.0% |
! | TCTAATGTTAACTTTGACAT+TGG | + | chr3_1:59256732-59256751 | Msa0365310:intron | 25.0% |
!! | GTAACATTTTGCAGAAAATA+TGG | + | chr3_1:59256850-59256869 | Msa0365310:intron | 25.0% |
! | TACTACAAGGATATAGTATA+TGG | + | chr3_1:59256939-59256958 | Msa0365310:intron | 25.0% |
! | ATCCTCAAAATGCAAAATTA+AGG | + | chr3_1:59257087-59257106 | Msa0365310:intron | 25.0% |
!! | ATCCTTAATTTTGCATTTTG+AGG | - | chr3_1:59257092-59257111 | None:intergenic | 25.0% |
!! | GAGGTGTATTTTGTATATAT+TGG | - | chr3_1:59257249-59257268 | None:intergenic | 25.0% |
!!! | AAGACTCTTTTGTTGTTTTA+CGG | - | chr3_1:59257439-59257458 | None:intergenic | 25.0% |
! | AAGAAGAACTTACATGAATA+CGG | - | chr3_1:59257524-59257543 | None:intergenic | 25.0% |
! | TTAGATTAAGAACACAACAA+TGG | - | chr3_1:59253170-59253189 | None:intergenic | 25.0% |
! | CTAACAATATTAAATGCAGT+TGG | + | chr3_1:59257989-59258008 | Msa0365310:intron | 25.0% |
!! | TAATCTTTCTTCTTAGTTTG+AGG | - | chr3_1:59258264-59258283 | None:intergenic | 25.0% |
! | AATAATATTTCTTCGGATCA+CGG | - | chr3_1:59258443-59258462 | None:intergenic | 25.0% |
! | CAGCTGTAATAATATTTCTT+CGG | - | chr3_1:59258450-59258469 | None:intergenic | 25.0% |
! | TATTGTCATGAATTTCAGAA+TGG | + | chr3_1:59258474-59258493 | Msa0365310:CDS | 25.0% |
! | GAATTATTCATTATTAAGCC+AGG | + | chr3_1:59259418-59259437 | Msa0365310:CDS | 25.0% |
GTTTAGAAACTTGAGAAACA+AGG | - | chr3_1:59252637-59252656 | None:intergenic | 30.0% | |
TTTGAAAAGATCGCATCTTT+AGG | - | chr3_1:59252761-59252780 | None:intergenic | 30.0% | |
! | AAGATTGCAATGTGTTTTCT+TGG | + | chr3_1:59252789-59252808 | Msa0365310:intron | 30.0% |
! | AATTCAGAACACAGTTTTTC+AGG | - | chr3_1:59252829-59252848 | None:intergenic | 30.0% |
!! | GTGTTTTGAATTGTTTGTTC+TGG | + | chr3_1:59253066-59253085 | Msa0365310:CDS | 30.0% |
CTAACGATATTAAATGCAGT+TGG | + | chr3_1:59253186-59253205 | Msa0365310:intron | 30.0% | |
TGATGTATACATTCAAAGTG+CGG | + | chr3_1:59253504-59253523 | Msa0365310:CDS | 30.0% | |
AATTATATTGCTTCGGATCA+CGG | - | chr3_1:59253595-59253614 | None:intergenic | 30.0% | |
ATATAGATCATGCAGTAAAG+GGG | + | chr3_1:59253646-59253665 | Msa0365310:CDS | 30.0% | |
TATGATATCAATCTGTTGCT+CGG | - | chr3_1:59254004-59254023 | None:intergenic | 30.0% | |
! | AAGGATATATCTGAAGTTGT+TGG | - | chr3_1:59254294-59254313 | None:intergenic | 30.0% |
TAACCACATTAGAATTGGTA+AGG | - | chr3_1:59254321-59254340 | None:intergenic | 30.0% | |
TGATCTAACCACATTAGAAT+TGG | - | chr3_1:59254326-59254345 | None:intergenic | 30.0% | |
CCGTGATAGAAAATTAGAAT+TGG | + | chr3_1:59254504-59254523 | Msa0365310:CDS | 30.0% | |
!! | TACATCAAATGTTGATGATC+AGG | + | chr3_1:59254558-59254577 | Msa0365310:CDS | 30.0% |
TATGGTTAATGAACTTGTGA+AGG | + | chr3_1:59254603-59254622 | Msa0365310:CDS | 30.0% | |
CAACTTCAACATTACAATGT+TGG | - | chr3_1:59254637-59254656 | None:intergenic | 30.0% | |
TGTGTTTATTTCCAAAAGAG+TGG | - | chr3_1:59255271-59255290 | None:intergenic | 30.0% | |
GTCCATTCAAAAAAAGAGAA+TGG | - | chr3_1:59255300-59255319 | None:intergenic | 30.0% | |
ACGCGAAAAGAAAATGATTT+AGG | - | chr3_1:59255591-59255610 | None:intergenic | 30.0% | |
! | ATATGTTTTCTCTTTCACTC+TGG | + | chr3_1:59255621-59255640 | Msa0365310:intron | 30.0% |
AAACAGAAAGGAATCAGATA+GGG | - | chr3_1:59255902-59255921 | None:intergenic | 30.0% | |
TAAACAGAAAGGAATCAGAT+AGG | - | chr3_1:59255903-59255922 | None:intergenic | 30.0% | |
TAAGGAATCATACAGTAAAG+GGG | - | chr3_1:59256277-59256296 | None:intergenic | 30.0% | |
GTAAGGAATCATACAGTAAA+GGG | - | chr3_1:59256278-59256297 | None:intergenic | 30.0% | |
TTTGAATTGGAAAGATCAGA+AGG | - | chr3_1:59256344-59256363 | None:intergenic | 30.0% | |
! | ACCAGTCTAAATTTTCATCA+GGG | - | chr3_1:59256517-59256536 | None:intergenic | 30.0% |
GTGATGAACTCAATAAAATG+AGG | + | chr3_1:59256546-59256565 | Msa0365310:CDS | 30.0% | |
! | ATGAGGAGATCTTATTCTTT+TGG | + | chr3_1:59256563-59256582 | Msa0365310:CDS | 30.0% |
! | GTGTCGATAATACAAAAGTT+AGG | + | chr3_1:59256877-59256896 | Msa0365310:intron | 30.0% |
!! | AACAACTTGTTACTACTACA+AGG | + | chr3_1:59256926-59256945 | Msa0365310:intron | 30.0% |
CTGTATATATATCTCGTATC+AGG | - | chr3_1:59257138-59257157 | None:intergenic | 30.0% | |
AATCAAAGTTACTCTACATG+AGG | - | chr3_1:59257268-59257287 | None:intergenic | 30.0% | |
AACTAACTCTCTATGAAATC+TGG | + | chr3_1:59257308-59257327 | Msa0365310:intron | 30.0% | |
!!! | TTTGTTGTTTTACGGTTTTG+AGG | - | chr3_1:59257431-59257450 | None:intergenic | 30.0% |
GTTTAGAAACTTGGAAAACA+AGG | - | chr3_1:59257477-59257496 | None:intergenic | 30.0% | |
TTGGTGAAAGTTTAGAAACT+TGG | - | chr3_1:59257486-59257505 | None:intergenic | 30.0% | |
! | TCTAAACTTTCACCAAGTTT+TGG | + | chr3_1:59257490-59257509 | Msa0365310:CDS | 30.0% |
! | TTAGAAAAGATCGCATCTTT+TGG | - | chr3_1:59257604-59257623 | None:intergenic | 30.0% |
CTATGAAAGTTCCTGAAAAA+GGG | + | chr3_1:59257658-59257677 | Msa0365310:intron | 30.0% | |
! | GAGATTACAATGTGTTTTCT+TGG | + | chr3_1:59257785-59257804 | Msa0365310:intron | 30.0% |
ATGCTTTGTCATATCAATGT+TGG | + | chr3_1:59257931-59257950 | Msa0365310:intron | 30.0% | |
GCACAAAGAAAAACAATTCT+GGG | - | chr3_1:59258066-59258085 | None:intergenic | 30.0% | |
AGCACAAAGAAAAACAATTC+TGG | - | chr3_1:59258067-59258086 | None:intergenic | 30.0% | |
! | AATATTTGTTGCCAATTTCC+TGG | + | chr3_1:59258145-59258164 | Msa0365310:intron | 30.0% |
TTACAAAATCATCAATCACC+AGG | - | chr3_1:59258166-59258185 | None:intergenic | 30.0% | |
TATATCCTATCCTTTATGTC+AGG | - | chr3_1:59258306-59258325 | None:intergenic | 30.0% | |
GATACATGTCAATATTCACA+TGG | + | chr3_1:59258513-59258532 | Msa0365310:CDS | 30.0% | |
AGAACAAAGCTTTGCAATAA+TGG | + | chr3_1:59258570-59258589 | Msa0365310:CDS | 30.0% | |
TTTGAATTTGATGTAGGTGA+AGG | - | chr3_1:59258681-59258700 | None:intergenic | 30.0% | |
GGTGAATTTGAATTTGATGT+AGG | - | chr3_1:59258687-59258706 | None:intergenic | 30.0% | |
ACATCAAATTCAAATTCACC+TGG | + | chr3_1:59258687-59258706 | Msa0365310:CDS | 30.0% | |
GAAGATTGTATCAAAGAAGA+CGG | - | chr3_1:59258747-59258766 | None:intergenic | 30.0% | |
CTATTTGACTCTTCTATCAT+TGG | - | chr3_1:59258960-59258979 | None:intergenic | 30.0% | |
CAATGATAGAAGAGTCAAAT+AGG | + | chr3_1:59258958-59258977 | Msa0365310:CDS | 30.0% | |
AAAATGTCTTCATGGTTAGT+AGG | - | chr3_1:59258999-59259018 | None:intergenic | 30.0% | |
! | ACTAACCATGAAGACATTTT+CGG | + | chr3_1:59258999-59259018 | Msa0365310:CDS | 30.0% |
TCATCGATACAATCTTCAAA+AGG | + | chr3_1:59259023-59259042 | Msa0365310:CDS | 30.0% | |
TGATCCAATCACATTTGAAT+CGG | - | chr3_1:59259105-59259124 | None:intergenic | 30.0% | |
ATTTCATTGAGTTTATCACC+GGG | - | chr3_1:59259320-59259339 | None:intergenic | 30.0% | |
CATTTCATTGAGTTTATCAC+CGG | - | chr3_1:59259321-59259340 | None:intergenic | 30.0% | |
ATGACGACATCTTATTCATT+CGG | + | chr3_1:59259338-59259357 | Msa0365310:CDS | 30.0% | |
TACTAGCAATGTTTCAACAA+TGG | + | chr3_1:59259373-59259392 | Msa0365310:CDS | 30.0% | |
ATTATTAAGCCAGGAATCTT+GGG | + | chr3_1:59259427-59259446 | Msa0365310:CDS | 30.0% | |
AAACTTGAGAAACAAGGCAA+AGG | - | chr3_1:59252631-59252650 | None:intergenic | 35.0% | |
TCTAAACCTTCACCAGATTT+CGG | + | chr3_1:59252650-59252669 | Msa0365310:CDS | 35.0% | |
AAGAAGAACTTACATGAGCA+AGG | - | chr3_1:59252908-59252927 | None:intergenic | 35.0% | |
!! | CTTGATGGGTCATTAAGTTT+TGG | + | chr3_1:59252963-59252982 | Msa0365310:intron | 35.0% |
CAGAAACAAGATTGCCTTAA+GGG | + | chr3_1:59253437-59253456 | Msa0365310:intron | 35.0% | |
ATTGCGGTTATGTTCATGAT+TGG | + | chr3_1:59253528-59253547 | Msa0365310:CDS | 35.0% | |
GATGAATGTCAATATGCACA+TGG | + | chr3_1:59253668-59253687 | Msa0365310:CDS | 35.0% | |
AGAACAACGCTTTGCAATAA+TGG | + | chr3_1:59253725-59253744 | Msa0365310:CDS | 35.0% | |
ACTGTAGTACTAATCTGAGT+CGG | - | chr3_1:59254055-59254074 | None:intergenic | 35.0% | |
TGCTAGAGATAATACTCATC+TGG | + | chr3_1:59254120-59254139 | Msa0365310:CDS | 35.0% | |
AAATAGCCTTCAAGGTTAGT+AGG | - | chr3_1:59254220-59254239 | None:intergenic | 35.0% | |
! | ACTAACCTTGAAGGCTATTT+TGG | + | chr3_1:59254220-59254239 | Msa0365310:CDS | 35.0% |
!! | CTAACCTTGAAGGCTATTTT+GGG | + | chr3_1:59254221-59254240 | Msa0365310:CDS | 35.0% |
TTAGAATTGGTAAGGTGAGA+AGG | - | chr3_1:59254313-59254332 | None:intergenic | 35.0% | |
TCACCTTACCAATTCTAATG+TGG | + | chr3_1:59254315-59254334 | Msa0365310:CDS | 35.0% | |
!! | TCAAATGTTGATGATCAGGA+TGG | + | chr3_1:59254562-59254581 | Msa0365310:CDS | 35.0% |
TGCGTGTATGTTTGAATATG+CGG | + | chr3_1:59255033-59255052 | Msa0365310:intron | 35.0% | |
TGTATGTTTGAATATGCGGT+GGG | + | chr3_1:59255037-59255056 | Msa0365310:intron | 35.0% | |
! | GTGATATTTCGCTGCAATTT+TGG | - | chr3_1:59255068-59255087 | None:intergenic | 35.0% |
AAACCAGAAGCTACTATTTG+CGG | - | chr3_1:59255104-59255123 | None:intergenic | 35.0% | |
!!! | ATAGTAGCTTCTGGTTTTCA+TGG | + | chr3_1:59255107-59255126 | Msa0365310:intron | 35.0% |
CATAATTCAAGGCGTATGTT+TGG | - | chr3_1:59255177-59255196 | None:intergenic | 35.0% | |
CAAACATACGCCTTGAATTA+TGG | + | chr3_1:59255175-59255194 | Msa0365310:intron | 35.0% | |
! | GTATCAAACTACCACTCTTT+TGG | + | chr3_1:59255257-59255276 | Msa0365310:intron | 35.0% |
!!! | GACGCTAGTTTACTGATTTT+GGG | + | chr3_1:59255317-59255336 | Msa0365310:intron | 35.0% |
! | AGCATCTGACAAACTGATTT+AGG | - | chr3_1:59255534-59255553 | None:intergenic | 35.0% |
!!! | TACAGCTTGTTTTTGCTGTT+TGG | + | chr3_1:59255650-59255669 | Msa0365310:intron | 35.0% |
AATCAGATAGGGAAATGGAA+AGG | - | chr3_1:59255891-59255910 | None:intergenic | 35.0% | |
AAAGGAATCAGATAGGGAAA+TGG | - | chr3_1:59255896-59255915 | None:intergenic | 35.0% | |
TTCAGCCAAAGGTTATACAA+TGG | + | chr3_1:59256117-59256136 | Msa0365310:intron | 35.0% | |
TTCGACCATTGTATAACCTT+TGG | - | chr3_1:59256125-59256144 | None:intergenic | 35.0% | |
AGCAAAAAAGCAAACTCTTC+TGG | + | chr3_1:59256161-59256180 | Msa0365310:intron | 35.0% | |
AACCTTGTTCTATATTGACC+AGG | + | chr3_1:59256207-59256226 | Msa0365310:intron | 35.0% | |
ATCCTGGTCAATATAGAACA+AGG | - | chr3_1:59256212-59256231 | None:intergenic | 35.0% | |
CGTAAGGAATCATACAGTAA+AGG | - | chr3_1:59256279-59256298 | None:intergenic | 35.0% | |
TATGATTCCTTACGAAACTC+AGG | + | chr3_1:59256285-59256304 | Msa0365310:intron | 35.0% | |
CTTTCCAATTCAAATGTGAG+TGG | + | chr3_1:59256350-59256369 | Msa0365310:CDS | 35.0% | |
TGATCCACTCACATTTGAAT+TGG | - | chr3_1:59256357-59256376 | None:intergenic | 35.0% | |
TATTGCTCTCAATAAAGCTC+TGG | - | chr3_1:59256415-59256434 | None:intergenic | 35.0% | |
!! | AGCTTTATTGAGAGCAATAG+CGG | + | chr3_1:59256416-59256435 | Msa0365310:CDS | 35.0% |
! | CCAGTCTAAATTTTCATCAG+GGG | - | chr3_1:59256516-59256535 | None:intergenic | 35.0% |
! | GACCAGTCTAAATTTTCATC+AGG | - | chr3_1:59256518-59256537 | None:intergenic | 35.0% |
! | TTTTATTGAGTTCATCACCG+CGG | - | chr3_1:59256544-59256563 | None:intergenic | 35.0% |
ATCCAGATGTTGAAGATCAA+CGG | + | chr3_1:59256633-59256652 | Msa0365310:CDS | 35.0% | |
TTTGCCAGAGAAATTGTACA+TGG | + | chr3_1:59256685-59256704 | Msa0365310:intron | 35.0% | |
TCATAGAGAGTTAGTTGAGT+TGG | - | chr3_1:59257304-59257323 | None:intergenic | 35.0% | |
AAACTTGGAAAACAAGGCAA+AGG | - | chr3_1:59257471-59257490 | None:intergenic | 35.0% | |
! | GAGATTGCAATGTGTTTTCT+TGG | + | chr3_1:59257632-59257651 | Msa0365310:intron | 35.0% |
GCTATGAAAGTTCCTGAAAA+AGG | + | chr3_1:59257657-59257676 | Msa0365310:intron | 35.0% | |
!!! | CTCTCAAGAAACACTTTTTC+AGG | - | chr3_1:59257825-59257844 | None:intergenic | 35.0% |
ATCATCAATCACCAGGAAAT+TGG | - | chr3_1:59258159-59258178 | None:intergenic | 35.0% | |
ACTGTAGTATGAATCTGAGT+CGG | - | chr3_1:59258834-59258853 | None:intergenic | 35.0% | |
! | CTAACCATGAAGACATTTTC+GGG | + | chr3_1:59259000-59259019 | Msa0365310:CDS | 35.0% |
ACAATCTTCAAAAGGAATGC+TGG | + | chr3_1:59259031-59259050 | Msa0365310:CDS | 35.0% | |
AATATGAACCAAGAACTGTG+TGG | + | chr3_1:59259062-59259081 | Msa0365310:CDS | 35.0% | |
CAATCACATTTGAATCGGAA+AGG | - | chr3_1:59259100-59259119 | None:intergenic | 35.0% | |
CTTTCCGATTCAAATGTGAT+TGG | + | chr3_1:59259098-59259117 | Msa0365310:CDS | 35.0% | |
TTTCATTGAGTTTATCACCG+GGG | - | chr3_1:59259319-59259338 | None:intergenic | 35.0% | |
AAACATTGCTAGTATCGTCT+AGG | - | chr3_1:59259367-59259386 | None:intergenic | 35.0% | |
CATTATTAAGCCAGGAATCT+TGG | + | chr3_1:59259426-59259445 | Msa0365310:CDS | 35.0% | |
TGTTGATCAGATTCCAATGT+TGG | - | chr3_1:59259479-59259498 | None:intergenic | 35.0% | |
AAACAAGGCAAAGGAAGAAG+TGG | - | chr3_1:59252622-59252641 | None:intergenic | 40.0% | |
GAAACAGCACCAAAACTTGA+AGG | - | chr3_1:59252886-59252905 | None:intergenic | 40.0% | |
ATGCTTTCTCTTTCACTCTC+TGG | + | chr3_1:59253125-59253144 | Msa0365310:intron | 40.0% | |
GCAGAAACAAGATTGCCTTA+AGG | + | chr3_1:59253436-59253455 | Msa0365310:intron | 40.0% | |
TTTCAAAACCTGCTCCCTTA+AGG | - | chr3_1:59253454-59253473 | None:intergenic | 40.0% | |
!!! | TAAGGGAGCAGGTTTTGAAA+TGG | + | chr3_1:59253454-59253473 | Msa0365310:CDS | 40.0% |
AAATGTCCCTTTGCTCATCA+TGG | + | chr3_1:59253554-59253573 | Msa0365310:CDS | 40.0% | |
AATGTCCCTTTGCTCATCAT+GGG | + | chr3_1:59253555-59253574 | Msa0365310:CDS | 40.0% | |
CTTCTTTGCTCACAATCATG+AGG | + | chr3_1:59253772-59253791 | Msa0365310:CDS | 40.0% | |
AACTGGTAGTAGCATTCAAC+GGG | - | chr3_1:59253805-59253824 | None:intergenic | 40.0% | |
GAACTGGTAGTAGCATTCAA+CGG | - | chr3_1:59253806-59253825 | None:intergenic | 40.0% | |
ATCGATGAAGGCAATGTGAA+AGG | - | chr3_1:59253884-59253903 | None:intergenic | 40.0% | |
GCAGGATATGATATTGCAGA+CGG | - | chr3_1:59253920-59253939 | None:intergenic | 40.0% | |
TCTGCAATATCATATCCTGC+AGG | + | chr3_1:59253920-59253939 | Msa0365310:CDS | 40.0% | |
ACTGTAGTACGATTCTGAGT+CGG | - | chr3_1:59253965-59253984 | None:intergenic | 40.0% | |
GCAGTATTCAATCTGTTGCT+CGG | - | chr3_1:59254094-59254113 | None:intergenic | 40.0% | |
ATGCCGAATCCAATGATAGA+AGG | + | chr3_1:59254169-59254188 | Msa0365310:CDS | 40.0% | |
TGCCGAATCCAATGATAGAA+GGG | + | chr3_1:59254170-59254189 | Msa0365310:CDS | 40.0% | |
GACCCTTCTATCATTGGATT+CGG | - | chr3_1:59254175-59254194 | None:intergenic | 40.0% | |
CTACTTGACCCTTCTATCAT+TGG | - | chr3_1:59254181-59254200 | None:intergenic | 40.0% | |
CAATGATAGAAGGGTCAAGT+AGG | + | chr3_1:59254179-59254198 | Msa0365310:CDS | 40.0% | |
GTGAATCCTACTAACCTTGA+AGG | + | chr3_1:59254211-59254230 | Msa0365310:CDS | 40.0% | |
ATGACCCAAAATAGCCTTCA+AGG | - | chr3_1:59254228-59254247 | None:intergenic | 40.0% | |
TGGTTAGATCACAACAGTTC+AGG | + | chr3_1:59254335-59254354 | Msa0365310:CDS | 40.0% | |
GGTTAGATCACAACAGTTCA+GGG | + | chr3_1:59254336-59254355 | Msa0365310:CDS | 40.0% | |
GTTAGATCACAACAGTTCAG+GGG | + | chr3_1:59254337-59254356 | Msa0365310:CDS | 40.0% | |
AATGCAACTGAGGTAGAATC+TGG | - | chr3_1:59254451-59254470 | None:intergenic | 40.0% | |
AGATTCTACCTCAGTTGCAT+TGG | + | chr3_1:59254450-59254469 | Msa0365310:CDS | 40.0% | |
CACTAGCAACACTTCAACAA+TGG | + | chr3_1:59254531-59254550 | Msa0365310:CDS | 40.0% | |
TCAACTTCAGTGCCATAATC+CGG | + | chr3_1:59254661-59254680 | Msa0365310:intron | 40.0% | |
TATAACTGCTTCGGCTAAGA+TGG | - | chr3_1:59254695-59254714 | None:intergenic | 40.0% | |
ATGAAAGCTCACCCTTCATT+TGG | + | chr3_1:59254913-59254932 | Msa0365310:intron | 40.0% | |
GTGTATGTTTGAATATGCGG+TGG | + | chr3_1:59255036-59255055 | Msa0365310:intron | 40.0% | |
!!! | GGACGCTAGTTTACTGATTT+TGG | + | chr3_1:59255316-59255335 | Msa0365310:intron | 40.0% |
GCAAGTAACTACTCACAAGT+TGG | - | chr3_1:59255446-59255465 | None:intergenic | 40.0% | |
AATCAGTTTGTCAGATGCTG+AGG | + | chr3_1:59255535-59255554 | Msa0365310:intron | 40.0% | |
! | TTGCTTGAGTTTTCAGCCAA+AGG | + | chr3_1:59256106-59256125 | Msa0365310:intron | 40.0% |
GATGCTTGTGAATATGCACA+CGG | - | chr3_1:59256255-59256274 | None:intergenic | 40.0% | |
GGACACAAATCAGCAACTTT+GGG | + | chr3_1:59256313-59256332 | Msa0365310:CDS | 40.0% | |
GACACAAATCAGCAACTTTG+GGG | + | chr3_1:59256314-59256333 | Msa0365310:CDS | 40.0% | |
TGAGTGGATCACAACAATTC+AGG | + | chr3_1:59256366-59256385 | Msa0365310:CDS | 40.0% | |
GAGTGGATCACAACAATTCA+GGG | + | chr3_1:59256367-59256386 | Msa0365310:CDS | 40.0% | |
! | GCTTTATTGAGAGCAATAGC+GGG | + | chr3_1:59256417-59256436 | Msa0365310:CDS | 40.0% |
CTTTATTGAGAGCAATAGCG+GGG | + | chr3_1:59256418-59256437 | Msa0365310:CDS | 40.0% | |
AGCCTTCTACTTTCTCTGAT+TGG | + | chr3_1:59256486-59256505 | Msa0365310:CDS | 40.0% | |
GCCTTCTACTTTCTCTGATT+GGG | + | chr3_1:59256487-59256506 | Msa0365310:CDS | 40.0% | |
CCTTCTACTTTCTCTGATTG+GGG | + | chr3_1:59256488-59256507 | Msa0365310:CDS | 40.0% | |
CCCCTGATGAAAATTTAGAC+TGG | + | chr3_1:59256513-59256532 | Msa0365310:CDS | 40.0% | |
TCAACGGCAATGCTATAATC+CGG | + | chr3_1:59256649-59256668 | Msa0365310:CDS | 40.0% | |
TGCTCCATGTACAATTTCTC+TGG | - | chr3_1:59256692-59256711 | None:intergenic | 40.0% | |
AAACAAGGCAAAGGAAGAAG+TGG | - | chr3_1:59252622-59252641 | None:intergenic | 40.0% | |
! | TTCAGAACACACCCTTTTTC+AGG | - | chr3_1:59257672-59257691 | None:intergenic | 40.0% |
! | CTTGATGGTTCGTTGAGTTT+CGG | + | chr3_1:59257732-59257751 | Msa0365310:intron | 40.0% |
! | CTCTCTAGAAGACAGAAAGA+AGG | + | chr3_1:59257885-59257904 | Msa0365310:CDS | 40.0% |
GAGAAGCAGAAACAACATGT+AGG | + | chr3_1:59258234-59258253 | Msa0365310:CDS | 40.0% | |
AAGCAGAAACAACATGTAGG+TGG | + | chr3_1:59258237-59258256 | Msa0365310:CDS | 40.0% | |
CCTATCCTTTATGTCAGGTA+GGG | - | chr3_1:59258301-59258320 | None:intergenic | 40.0% | |
TCCTATCCTTTATGTCAGGT+AGG | - | chr3_1:59258302-59258321 | None:intergenic | 40.0% | |
TCAAAGTGAAGCTTTGCTCA+TGG | + | chr3_1:59258355-59258374 | Msa0365310:CDS | 40.0% | |
CAAAGTGAAGCTTTGCTCAT+GGG | + | chr3_1:59258356-59258375 | Msa0365310:CDS | 40.0% | |
AAATGTCCCTTTGCTCATTC+TGG | + | chr3_1:59258402-59258421 | Msa0365310:CDS | 40.0% | |
AATGTCCCTTTGCTCATTCT+GGG | + | chr3_1:59258403-59258422 | Msa0365310:CDS | 40.0% | |
ATTTCCCCAGAATGAGCAAA+GGG | - | chr3_1:59258411-59258430 | None:intergenic | 40.0% | |
AATTTCCCCAGAATGAGCAA+AGG | - | chr3_1:59258412-59258431 | None:intergenic | 40.0% | |
AGAATGGATCATGCAGTAGA+GGG | + | chr3_1:59258490-59258509 | Msa0365310:CDS | 40.0% | |
!!! | TCACATGGTGTTTTTGAGTC+CGG | + | chr3_1:59258528-59258547 | Msa0365310:CDS | 40.0% |
!! | AGCTTTGTTCTGTATCGACT+AGG | - | chr3_1:59258561-59258580 | None:intergenic | 40.0% |
AACTGGTATAAGCCTTCAAC+AGG | - | chr3_1:59258650-59258669 | None:intergenic | 40.0% | |
TTCACCTGGTGTTTCTTCAA+TGG | + | chr3_1:59258701-59258720 | Msa0365310:CDS | 40.0% | |
GAATCCATTGAAGAAACACC+AGG | - | chr3_1:59258708-59258727 | None:intergenic | 40.0% | |
! | GCAGTTTTCAATCTGTTGCT+CGG | - | chr3_1:59258873-59258892 | None:intergenic | 40.0% |
ATGACCCGAAAATGTCTTCA+TGG | - | chr3_1:59259007-59259026 | None:intergenic | 40.0% | |
CACATTTGAATCGGAAAGGT+CGG | - | chr3_1:59259096-59259115 | None:intergenic | 40.0% | |
! | AATGGATCAACCTTGAGTTG+TGG | - | chr3_1:59259128-59259147 | None:intergenic | 40.0% |
! | GATATGATGCCATTTCGAAG+TGG | + | chr3_1:59259159-59259178 | Msa0365310:CDS | 40.0% |
! | AGAAGGCTCTAATTCAACTG+AGG | - | chr3_1:59259246-59259265 | None:intergenic | 40.0% |
TTGGTACTCCACTGATAGAA+AGG | + | chr3_1:59259280-59259299 | Msa0365310:CDS | 40.0% | |
CCAATCTACCTTTCTATCAG+TGG | - | chr3_1:59259291-59259310 | None:intergenic | 40.0% | |
CCACTGATAGAAAGGTAGAT+TGG | + | chr3_1:59259288-59259307 | Msa0365310:CDS | 40.0% | |
GAAGGATGATGATCCAACAT+TGG | + | chr3_1:59259463-59259482 | Msa0365310:CDS | 40.0% | |
TCAACTGCAATGCCATAATC+CGG | + | chr3_1:59259517-59259536 | Msa0365310:CDS | 40.0% | |
ACATTCAAAGTGCGGCATTG+CGG | + | chr3_1:59253512-59253531 | Msa0365310:CDS | 45.0% | |
ATGTCCCTTTGCTCATCATG+GGG | + | chr3_1:59253556-59253575 | Msa0365310:CDS | 45.0% | |
CTTTCCCCATGATGAGCAAA+GGG | - | chr3_1:59253563-59253582 | None:intergenic | 45.0% | |
!! | AGCGTTGTTCTGTATCGACT+AGG | - | chr3_1:59253716-59253735 | None:intergenic | 45.0% |
ATGTGAAGGCAAAGCAGAAC+TGG | - | chr3_1:59253822-59253841 | None:intergenic | 45.0% | |
!! | GGATACATTGCAGAAGCACT+TGG | - | chr3_1:59253863-59253882 | None:intergenic | 45.0% |
ATCCTGCAGAAAGAACCATG+TGG | + | chr3_1:59254023-59254042 | Msa0365310:CDS | 45.0% | |
GTACTAATCTGAGTCGGAGT+CGG | - | chr3_1:59254049-59254068 | None:intergenic | 45.0% | |
ACAATCTCTGACAGCAATGC+AGG | + | chr3_1:59254252-59254271 | Msa0365310:CDS | 45.0% | |
CAATCTCTGACAGCAATGCA+GGG | + | chr3_1:59254253-59254272 | Msa0365310:CDS | 45.0% | |
AATCTCTGACAGCAATGCAG+GGG | + | chr3_1:59254254-59254273 | Msa0365310:CDS | 45.0% | |
CAAGATATGATGCCCTTTCG+AGG | + | chr3_1:59254377-59254396 | Msa0365310:CDS | 45.0% | |
TGCTGCTCTCGATAAAGTTC+TGG | - | chr3_1:59254408-59254427 | None:intergenic | 45.0% | |
TGAGGTAGAATCTGGAAGCT+TGG | - | chr3_1:59254443-59254462 | None:intergenic | 45.0% | |
ATGGAACATCGTCCGGATTA+TGG | - | chr3_1:59254676-59254695 | None:intergenic | 45.0% | |
GGGTGACACTGCAGAAAATA+TGG | + | chr3_1:59254766-59254785 | Msa0365310:intron | 45.0% | |
ATGTTTGAATATGCGGTGGG+AGG | + | chr3_1:59255040-59255059 | Msa0365310:intron | 45.0% | |
AAGCCGCAAATAGTAGCTTC+TGG | + | chr3_1:59255098-59255117 | Msa0365310:intron | 45.0% | |
GTCATGTGCAACGATACGAA+TGG | + | chr3_1:59256010-59256029 | Msa0365310:intron | 45.0% | |
ATACAATGGTCGAAGCTCCT+CGG | + | chr3_1:59256131-59256150 | Msa0365310:intron | 45.0% | |
!!! | CTTTTTTGCTCACAAACCCG+AGG | - | chr3_1:59256151-59256170 | None:intergenic | 45.0% |
GCAAACTCTTCTGGTGCAAT+AGG | + | chr3_1:59256170-59256189 | Msa0365310:intron | 45.0% | |
!!! | CACACGGTATTTTCGAGTTC+TGG | - | chr3_1:59256239-59256258 | None:intergenic | 45.0% |
TCCTTACGAAACTCAGGACA+AGG | + | chr3_1:59256291-59256310 | Msa0365310:intron | 45.0% | |
CCTTACGAAACTCAGGACAA+GGG | + | chr3_1:59256292-59256311 | Msa0365310:intron | 45.0% | |
GGGACACAAATCAGCAACTT+TGG | + | chr3_1:59256312-59256331 | Msa0365310:CDS | 45.0% | |
!!! | GGGTTGATGCCTTTTCGAAA+CGG | + | chr3_1:59256387-59256406 | Msa0365310:CDS | 45.0% |
ATGGCAACTAAGGTAGCAGA+TGG | - | chr3_1:59256464-59256483 | None:intergenic | 45.0% | |
ATCTGCTACCTTAGTTGCCA+TGG | + | chr3_1:59256463-59256482 | Msa0365310:CDS | 45.0% | |
AGAGAAAGTAGAAGGCTCCA+TGG | - | chr3_1:59256483-59256502 | None:intergenic | 45.0% | |
CCCCAATCAGAGAAAGTAGA+AGG | - | chr3_1:59256491-59256510 | None:intergenic | 45.0% | |
! | AATTTAGACTGGTCCATCCG+CGG | + | chr3_1:59256524-59256543 | Msa0365310:CDS | 45.0% |
TGCCGTTGATCTTCAACATC+TGG | - | chr3_1:59256638-59256657 | None:intergenic | 45.0% | |
GTACATGGAGCATAAGCAGA+AGG | + | chr3_1:59256700-59256719 | Msa0365310:intron | 45.0% | |
ACGGAAACTGCACCAAAACT+TGG | - | chr3_1:59257505-59257524 | None:intergenic | 45.0% | |
ACAGAACCAAGATTGCCTCA+AGG | + | chr3_1:59258194-59258213 | Msa0365310:intron | 45.0% | |
CAGAACCAAGATTGCCTCAA+GGG | + | chr3_1:59258195-59258214 | Msa0365310:intron | 45.0% | |
TTTCGAAACCTTCTCCCTTG+AGG | - | chr3_1:59258212-59258231 | None:intergenic | 45.0% | |
CAAGGGAGAAGGTTTCGAAA+TGG | + | chr3_1:59258212-59258231 | Msa0365310:CDS | 45.0% | |
TCGATCCCTACCTGACATAA+AGG | + | chr3_1:59258293-59258312 | Msa0365310:CDS | 45.0% | |
CCCTACCTGACATAAAGGAT+AGG | + | chr3_1:59258298-59258317 | Msa0365310:CDS | 45.0% | |
! | GGACATTTTGTCCACTCATG+AGG | - | chr3_1:59258390-59258409 | None:intergenic | 45.0% |
ATGTCCCTTTGCTCATTCTG+GGG | + | chr3_1:59258404-59258423 | Msa0365310:CDS | 45.0% | |
! | CTCATTCTGGGGAAATTGCA+AGG | + | chr3_1:59258415-59258434 | Msa0365310:CDS | 45.0% |
CAGAATGGATCATGCAGTAG+AGG | + | chr3_1:59258489-59258508 | Msa0365310:CDS | 45.0% | |
GAATGGATCATGCAGTAGAG+GGG | + | chr3_1:59258491-59258510 | Msa0365310:CDS | 45.0% | |
!!! | CACATGGTGTTTTTGAGTCC+GGG | + | chr3_1:59258529-59258548 | Msa0365310:CDS | 45.0% |
AGGTGAAGGAAAAGCAGAAC+TGG | - | chr3_1:59258667-59258686 | None:intergenic | 45.0% | |
GAAGAGTCAAATAGGCTTGC+AGG | + | chr3_1:59258966-59258985 | Msa0365310:CDS | 45.0% | |
TAGAGTAGCCACACAGTTCT+TGG | - | chr3_1:59259073-59259092 | None:intergenic | 45.0% | |
GATTGGATCACCACAACTCA+AGG | + | chr3_1:59259115-59259134 | Msa0365310:CDS | 45.0% | |
TGCTTCGCTTGATAAAGCTC+TGG | - | chr3_1:59259187-59259206 | None:intergenic | 45.0% | |
AATTCAACTGAGGTGGCAGA+AGG | - | chr3_1:59259236-59259255 | None:intergenic | 45.0% | |
! | AGGCTCTAATTCAACTGAGG+TGG | - | chr3_1:59259243-59259262 | None:intergenic | 45.0% |
CAATCAGAGAAGGCAGTAGA+AGG | - | chr3_1:59259263-59259282 | None:intergenic | 45.0% | |
CTTCTACTGCCTTCTCTGAT+TGG | + | chr3_1:59259261-59259280 | Msa0365310:CDS | 45.0% | |
! | AGTGGAGTACCAATCAGAGA+AGG | - | chr3_1:59259273-59259292 | None:intergenic | 45.0% |
!! | AAGGTAGATTGGTCTATCCC+CGG | + | chr3_1:59259299-59259318 | Msa0365310:CDS | 45.0% |
!! | TTGGGTTAGCTCACTTGTGA+AGG | + | chr3_1:59259445-59259464 | Msa0365310:CDS | 45.0% |
ATGGAACATCGTCCGGATTA+TGG | - | chr3_1:59254676-59254695 | None:intergenic | 45.0% | |
AAGGAACCTGCACCGAAATC+TGG | - | chr3_1:59252665-59252684 | None:intergenic | 50.0% | |
CAAGATTGCCTTAAGGGAGC+AGG | + | chr3_1:59253443-59253462 | Msa0365310:CDS | 50.0% | |
GCTTTCCCCATGATGAGCAA+AGG | - | chr3_1:59253564-59253583 | None:intergenic | 50.0% | |
GCACATGGTGTTCTTGAGTC+CGG | + | chr3_1:59253683-59253702 | Msa0365310:CDS | 50.0% | |
CACATGGTGTTCTTGAGTCC+GGG | + | chr3_1:59253684-59253703 | Msa0365310:CDS | 50.0% | |
GATATTGCAGACGGTGTCCA+AGG | - | chr3_1:59253911-59253930 | None:intergenic | 50.0% | |
ATCCTGCAGGAAGAACCATG+TGG | + | chr3_1:59253933-59253952 | Msa0365310:CDS | 50.0% | |
GTACGATTCTGAGTCGGAGT+CGG | - | chr3_1:59253959-59253978 | None:intergenic | 50.0% | |
AATCTGTTGCTCGGCATCTG+AGG | - | chr3_1:59253995-59254014 | None:intergenic | 50.0% | |
AATCTGTTGCTCGGCATCTG+AGG | - | chr3_1:59253995-59254014 | None:intergenic | 50.0% | |
CTTTATCGAGAGCAGCAGCA+TGG | + | chr3_1:59254411-59254430 | Msa0365310:CDS | 50.0% | |
TGAAGGCTCCAATGCAACTG+AGG | - | chr3_1:59254461-59254480 | None:intergenic | 50.0% | |
GGCTAAGATGGAACATCGTC+CGG | - | chr3_1:59254683-59254702 | None:intergenic | 50.0% | |
TACAATGGTCGAAGCTCCTC+GGG | + | chr3_1:59256132-59256151 | Msa0365310:intron | 50.0% | |
!! | TTCGAGTTCTGGCTTCATCC+TGG | - | chr3_1:59256228-59256247 | None:intergenic | 50.0% |
CCCTTGTCCTGAGTTTCGTA+AGG | - | chr3_1:59256295-59256314 | None:intergenic | 50.0% | |
AGAAGGCTCCATGGCAACTA+AGG | - | chr3_1:59256474-59256493 | None:intergenic | 50.0% | |
ATTGAGTTCATCACCGCGGA+TGG | - | chr3_1:59256540-59256559 | None:intergenic | 50.0% | |
GCAATGCTATAATCCGGACG+CGG | + | chr3_1:59256655-59256674 | Msa0365310:CDS | 50.0% | |
CATGGAGCATAAGCAGAAGG+TGG | + | chr3_1:59256703-59256722 | Msa0365310:intron | 50.0% | |
TGGATCCTCTGTGCATCTCT+AGG | + | chr3_1:59256752-59256771 | Msa0365310:intron | 50.0% | |
! | ACTAGCCTAGAGATGCACAG+AGG | - | chr3_1:59256760-59256779 | None:intergenic | 50.0% |
CTTCTCCCTTGAGGCAATCT+TGG | - | chr3_1:59258203-59258222 | None:intergenic | 50.0% | |
CAAGATTGCCTCAAGGGAGA+AGG | + | chr3_1:59258201-59258220 | Msa0365310:CDS | 50.0% | |
GGGATAATGCTCCTCATGAG+TGG | + | chr3_1:59258376-59258395 | Msa0365310:CDS | 50.0% | |
CTTCTTTGCTCACAAACCCG+AGG | + | chr3_1:59258617-59258636 | Msa0365310:CDS | 50.0% | |
AATCTTCGTCGACACTGCCT+TGG | + | chr3_1:59258760-59258779 | Msa0365310:CDS | 50.0% | |
GCAGGAGATGATGTTGCAGA+CGG | - | chr3_1:59258789-59258808 | None:intergenic | 50.0% | |
TCTGCAACATCATCTCCTGC+AGG | + | chr3_1:59258789-59258808 | Msa0365310:CDS | 50.0% | |
! | TGCTCGGCATCTGAAGTGTA+GGG | - | chr3_1:59258857-59258876 | None:intergenic | 50.0% |
! | TTGCTCGGCATCTGAAGTGT+AGG | - | chr3_1:59258858-59258877 | None:intergenic | 50.0% |
CTTTATCAAGCGAAGCAGCG+TGG | + | chr3_1:59259190-59259209 | Msa0365310:CDS | 50.0% | |
GTGAGCTAACCCAAGATTCC+TGG | - | chr3_1:59259439-59259458 | None:intergenic | 50.0% | |
CCTGCACCGAAATCTGGTGA+AGG | - | chr3_1:59252659-59252678 | None:intergenic | 55.0% | |
! | CCTTCACCAGATTTCGGTGC+AGG | + | chr3_1:59252656-59252675 | Msa0365310:CDS | 55.0% |
!! | GTATCGACTAGGATGCAGCC+CGG | - | chr3_1:59253705-59253724 | None:intergenic | 55.0% |
ATTGCAGACGGTGTCCAAGG+CGG | - | chr3_1:59253908-59253927 | None:intergenic | 55.0% | |
! | TGCTCGGCATCTGAGGTGTA+GGG | - | chr3_1:59253988-59254007 | None:intergenic | 55.0% |
! | TTGCTCGGCATCTGAGGTGT+AGG | - | chr3_1:59253989-59254008 | None:intergenic | 55.0% |
GGCCACATGGTTCTTTCTGC+AGG | - | chr3_1:59254028-59254047 | None:intergenic | 55.0% | |
! | TGCTCGGCATCTGAGGTGTA+GGG | - | chr3_1:59253988-59254007 | None:intergenic | 55.0% |
! | TTGCTCGGCATCTGAGGTGT+AGG | - | chr3_1:59253989-59254008 | None:intergenic | 55.0% |
GAAGGGTCAAGTAGGCTTGC+TGG | + | chr3_1:59254187-59254206 | Msa0365310:CDS | 55.0% | |
!! | GTTCTGGCTCTGCCTCGAAA+GGG | - | chr3_1:59254392-59254411 | None:intergenic | 55.0% |
!! | AGTTCTGGCTCTGCCTCGAA+AGG | - | chr3_1:59254393-59254412 | None:intergenic | 55.0% |
GAGCCTTCAACTGCCTTCTC+CGG | + | chr3_1:59254472-59254491 | Msa0365310:CDS | 55.0% | |
CAACCGGAGAAGGCAGTTGA+AGG | - | chr3_1:59254478-59254497 | None:intergenic | 55.0% | |
CTTCAACTGCCTTCTCCGGT+TGG | + | chr3_1:59254476-59254495 | Msa0365310:CDS | 55.0% | |
! | GCTCTGGCTCCGTTTCGAAA+AGG | - | chr3_1:59256399-59256418 | None:intergenic | 55.0% |
GACTAGTGCAGCAGCTCAGT+AGG | + | chr3_1:59257392-59257411 | Msa0365310:intron | 55.0% | |
!! | GTATCGACTAGGATGCAGCC+CGG | - | chr3_1:59253705-59253724 | None:intergenic | 55.0% |
TTCAACAGGCGAAGCTCCTC+GGG | - | chr3_1:59258636-59258655 | None:intergenic | 55.0% | |
CTTCAACAGGCGAAGCTCCT+CGG | - | chr3_1:59258637-59258656 | None:intergenic | 55.0% | |
GATGTTGCAGACGGAGTCCA+AGG | - | chr3_1:59258780-59258799 | None:intergenic | 55.0% | |
GCAACATCATCTCCTGCAGG+AGG | + | chr3_1:59258792-59258811 | Msa0365310:CDS | 55.0% | |
! | GCTCTGGCTCCACTTCGAAA+TGG | - | chr3_1:59259171-59259190 | None:intergenic | 55.0% |
TGCCTTCATCGATGCCGCCT+TGG | + | chr3_1:59253891-59253910 | Msa0365310:CDS | 60.0% | |
!! | GTCCAAGGCGGCATCGATGA+AGG | - | chr3_1:59253896-59253915 | None:intergenic | 60.0% |
GGCCACATGGTTCTTCCTGC+AGG | - | chr3_1:59253938-59253957 | None:intergenic | 60.0% | |
!! | TCTATCACGGGAGCGCCAAC+CGG | - | chr3_1:59254494-59254513 | None:intergenic | 60.0% |
TGCTGCAGTCGCACGACTGA+TGG | - | chr3_1:59255141-59255160 | None:intergenic | 60.0% | |
GGCAAAGACGAAACCGCGTC+CGG | - | chr3_1:59256671-59256690 | None:intergenic | 60.0% | |
CGAGGAGCTTCGCCTGTTGA+AGG | + | chr3_1:59258635-59258654 | Msa0365310:CDS | 60.0% | |
CTCCTGCAGGAGGAACCATG+TGG | + | chr3_1:59258802-59258821 | Msa0365310:CDS | 60.0% | |
TGCCACATGGTTCCTCCTGC+AGG | - | chr3_1:59258807-59258826 | None:intergenic | 60.0% | |
CTGAGTCGGAGTCTGCCACA+TGG | - | chr3_1:59258820-59258839 | None:intergenic | 60.0% | |
CTGAGTCGGAGTCGGCCACA+TGG | - | chr3_1:59253951-59253970 | None:intergenic | 65.0% | |
CTGAGTCGGAGTCGGCCACA+TGG | - | chr3_1:59253951-59253970 | None:intergenic | 65.0% | |
!! | ACGGGAGCGCCAACCGGAGA+AGG | - | chr3_1:59254488-59254507 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 59252606 | 59259556 | 59252606 | ID=Msa0365310;Name=Msa0365310 |
chr3_1 | mRNA | 59252606 | 59259556 | 59252606 | ID=Msa0365310-mRNA-1;Parent=Msa0365310;Name=Msa0365310-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.75|0.14|0|8|0|1113 |
chr3_1 | exon | 59252606 | 59252677 | 59252606 | ID=Msa0365310-mRNA-1:exon:11310;Parent=Msa0365310-mRNA-1 |
chr3_1 | exon | 59252870 | 59252914 | 59252870 | ID=Msa0365310-mRNA-1:exon:11311;Parent=Msa0365310-mRNA-1 |
chr3_1 | exon | 59253011 | 59253112 | 59253011 | ID=Msa0365310-mRNA-1:exon:11312;Parent=Msa0365310-mRNA-1 |
chr3_1 | exon | 59253440 | 59254641 | 59253440 | ID=Msa0365310-mRNA-1:exon:11313;Parent=Msa0365310-mRNA-1 |
chr3_1 | exon | 59256307 | 59256699 | 59256307 | ID=Msa0365310-mRNA-1:exon:11314;Parent=Msa0365310-mRNA-1 |
chr3_1 | exon | 59257453 | 59257530 | 59257453 | ID=Msa0365310-mRNA-1:exon:11315;Parent=Msa0365310-mRNA-1 |
chr3_1 | exon | 59257816 | 59257906 | 59257816 | ID=Msa0365310-mRNA-1:exon:11316;Parent=Msa0365310-mRNA-1 |
chr3_1 | exon | 59258198 | 59259556 | 59258198 | ID=Msa0365310-mRNA-1:exon:11317;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59252606 | 59252677 | 59252606 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59252870 | 59252914 | 59252870 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59253011 | 59253112 | 59253011 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59253440 | 59254641 | 59253440 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59256307 | 59256699 | 59256307 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59257453 | 59257530 | 59257453 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59257816 | 59257906 | 59257816 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
chr3_1 | CDS | 59258198 | 59259556 | 59258198 | ID=Msa0365310-mRNA-1:cds;Parent=Msa0365310-mRNA-1 |
Gene Sequence |
Protein sequence |