Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366080 | XP_013460373.1 | 93.059 | 461 | 32 | 0 | 1 | 461 | 1 | 461 | 0.0 | 895 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366080 | sp|Q8GYW8|SCT_ARATH | 37.931 | 464 | 258 | 13 | 8 | 460 | 11 | 455 | 9.25e-92 | 289 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366080 | A0A072UYC5 | 93.059 | 461 | 32 | 0 | 1 | 461 | 1 | 461 | 0.0 | 895 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0366080 | Msa0459030 | 0.807300 | 5.407143e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366080 | MtrunA17_Chr3g0106761 | 87.961 | 407 | 49 | 0 | 55 | 461 | 1 | 407 | 0.0 | 748 |
| Msa0366080 | MtrunA17_Chr3g0106741 | 93.684 | 380 | 24 | 0 | 82 | 461 | 59 | 438 | 0.0 | 745 |
| Msa0366080 | MtrunA17_Chr3g0106691 | 68.817 | 465 | 136 | 5 | 1 | 460 | 47 | 507 | 0.0 | 670 |
| Msa0366080 | MtrunA17_Chr3g0106661 | 67.804 | 469 | 140 | 6 | 1 | 460 | 1 | 467 | 0.0 | 646 |
| Msa0366080 | MtrunA17_Chr3g0106721 | 67.857 | 448 | 132 | 3 | 1 | 445 | 1 | 439 | 0.0 | 621 |
| Msa0366080 | MtrunA17_Chr6g0470591 | 56.774 | 465 | 183 | 10 | 4 | 457 | 5 | 462 | 1.35e-179 | 510 |
| Msa0366080 | MtrunA17_Chr4g0027071 | 51.386 | 469 | 200 | 12 | 4 | 460 | 6 | 458 | 7.46e-156 | 450 |
| Msa0366080 | MtrunA17_Chr3g0106711 | 70.259 | 232 | 64 | 3 | 1 | 228 | 1 | 231 | 5.95e-119 | 347 |
| Msa0366080 | MtrunA17_Chr3g0106701 | 65.698 | 172 | 56 | 2 | 291 | 460 | 1 | 171 | 8.00e-76 | 234 |
| Msa0366080 | MtrunA17_Chr3g0106631 | 70.270 | 148 | 44 | 0 | 151 | 298 | 2 | 149 | 3.43e-75 | 233 |
| Msa0366080 | MtrunA17_Chr2g0283361 | 32.385 | 457 | 277 | 15 | 9 | 455 | 1 | 435 | 1.41e-66 | 220 |
| Msa0366080 | MtrunA17_Chr3g0106771 | 88.506 | 87 | 10 | 0 | 1 | 87 | 1 | 87 | 3.49e-48 | 160 |
| Msa0366080 | MtrunA17_Chr3g0106751 | 85.057 | 87 | 13 | 0 | 1 | 87 | 1 | 87 | 1.33e-45 | 154 |
| Msa0366080 | MtrunA17_Chr7g0270771 | 35.211 | 284 | 154 | 10 | 17 | 296 | 12 | 269 | 8.39e-43 | 152 |
| Msa0366080 | MtrunA17_Chr3g0106621 | 57.031 | 128 | 46 | 2 | 333 | 460 | 2 | 120 | 1.16e-41 | 144 |
| Msa0366080 | MtrunA17_Chr7g0224391 | 30.750 | 400 | 232 | 18 | 17 | 401 | 23 | 392 | 4.92e-40 | 149 |
| Msa0366080 | MtrunA17_Chr8g0386141 | 27.527 | 465 | 278 | 18 | 8 | 455 | 5 | 427 | 7.13e-40 | 149 |
| Msa0366080 | MtrunA17_Chr3g0132001 | 28.188 | 447 | 275 | 19 | 16 | 452 | 20 | 430 | 1.31e-38 | 145 |
| Msa0366080 | MtrunA17_Chr3g0113821 | 27.902 | 448 | 268 | 17 | 10 | 427 | 5 | 427 | 1.64e-38 | 145 |
| Msa0366080 | MtrunA17_Chr3g0106641 | 77.778 | 90 | 18 | 1 | 1 | 88 | 44 | 133 | 3.14e-38 | 135 |
| Msa0366080 | MtrunA17_Chr1g0165681 | 30.812 | 357 | 214 | 11 | 17 | 361 | 16 | 351 | 1.06e-37 | 143 |
| Msa0366080 | MtrunA17_Chr1g0165661 | 29.011 | 455 | 278 | 15 | 17 | 457 | 16 | 439 | 1.58e-37 | 142 |
| Msa0366080 | MtrunA17_Chr1g0191081 | 28.256 | 453 | 283 | 15 | 17 | 457 | 25 | 447 | 3.59e-37 | 141 |
| Msa0366080 | MtrunA17_Chr1g0165671 | 27.253 | 455 | 284 | 15 | 17 | 457 | 34 | 455 | 1.34e-36 | 140 |
| Msa0366080 | MtrunA17_Chr2g0306321 | 28.726 | 463 | 273 | 22 | 18 | 454 | 26 | 457 | 3.80e-36 | 139 |
| Msa0366080 | MtrunA17_Chr5g0433641 | 26.972 | 393 | 260 | 10 | 17 | 401 | 17 | 390 | 1.20e-34 | 134 |
| Msa0366080 | MtrunA17_Chr7g0273761 | 29.367 | 395 | 249 | 13 | 17 | 401 | 389 | 763 | 5.83e-33 | 132 |
| Msa0366080 | MtrunA17_Chr7g0273761 | 26.646 | 319 | 199 | 12 | 150 | 457 | 32 | 326 | 3.21e-17 | 84.7 |
| Msa0366080 | MtrunA17_Chr3g0106651 | 71.084 | 83 | 23 | 1 | 6 | 87 | 36 | 118 | 1.79e-32 | 120 |
| Msa0366080 | MtrunA17_Chr8g0371821 | 28.533 | 368 | 234 | 13 | 8 | 366 | 1 | 348 | 3.88e-32 | 127 |
| Msa0366080 | MtrunA17_Chr3g0141851 | 24.279 | 416 | 260 | 11 | 18 | 412 | 20 | 401 | 7.77e-32 | 126 |
| Msa0366080 | MtrunA17_Chr7g0273721 | 27.919 | 394 | 256 | 12 | 17 | 401 | 18 | 392 | 7.91e-32 | 127 |
| Msa0366080 | MtrunA17_Chr7g0273781 | 28.571 | 392 | 254 | 11 | 17 | 401 | 50 | 422 | 2.07e-31 | 126 |
| Msa0366080 | MtrunA17_Chr4g0001861 | 26.777 | 422 | 256 | 19 | 8 | 406 | 1 | 392 | 1.78e-30 | 122 |
| Msa0366080 | MtrunA17_Chr7g0273791 | 29.377 | 337 | 216 | 9 | 17 | 345 | 17 | 339 | 1.19e-29 | 120 |
| Msa0366080 | MtrunA17_Chr2g0334001 | 25.054 | 467 | 288 | 19 | 8 | 452 | 1 | 427 | 1.55e-29 | 119 |
| Msa0366080 | MtrunA17_Chr1g0165711 | 28.060 | 335 | 204 | 10 | 17 | 339 | 16 | 325 | 1.72e-29 | 119 |
| Msa0366080 | MtrunA17_Chr7g0273731 | 26.503 | 449 | 297 | 13 | 17 | 457 | 100 | 523 | 8.10e-29 | 119 |
| Msa0366080 | MtrunA17_Chr3g0087401 | 26.509 | 381 | 236 | 15 | 20 | 377 | 12 | 371 | 3.23e-28 | 116 |
| Msa0366080 | MtrunA17_Chr7g0253541 | 27.791 | 421 | 260 | 19 | 18 | 409 | 12 | 417 | 1.85e-25 | 108 |
| Msa0366080 | MtrunA17_Chr7g0253501 | 25.629 | 437 | 266 | 21 | 9 | 406 | 1 | 417 | 2.01e-23 | 102 |
| Msa0366080 | MtrunA17_Chr4g0054081 | 29.492 | 295 | 173 | 13 | 68 | 344 | 65 | 342 | 3.85e-22 | 98.6 |
| Msa0366080 | MtrunA17_Chr4g0072041 | 28.223 | 287 | 184 | 9 | 68 | 343 | 70 | 345 | 7.26e-21 | 94.7 |
| Msa0366080 | MtrunA17_Chr7g0253531 | 25.287 | 435 | 270 | 24 | 9 | 406 | 1 | 417 | 1.78e-19 | 90.9 |
| Msa0366080 | MtrunA17_Chr6g0471971 | 31.746 | 189 | 117 | 5 | 167 | 351 | 3 | 183 | 1.79e-19 | 87.0 |
| Msa0366080 | MtrunA17_Chr8g0359251 | 26.296 | 270 | 181 | 5 | 68 | 329 | 63 | 322 | 1.82e-18 | 87.4 |
| Msa0366080 | MtrunA17_Chr3g0134071 | 29.032 | 279 | 166 | 10 | 69 | 329 | 71 | 335 | 5.99e-18 | 86.3 |
| Msa0366080 | MtrunA17_Chr7g0252731 | 29.290 | 338 | 197 | 15 | 4 | 320 | 7 | 323 | 6.14e-18 | 85.9 |
| Msa0366080 | MtrunA17_Chr3g0134121 | 27.338 | 278 | 178 | 10 | 69 | 334 | 70 | 335 | 6.47e-18 | 86.3 |
| Msa0366080 | MtrunA17_Chr3g0134091 | 27.368 | 285 | 171 | 11 | 68 | 334 | 68 | 334 | 1.14e-17 | 85.1 |
| Msa0366080 | MtrunA17_Chr3g0134041 | 26.871 | 294 | 161 | 12 | 68 | 334 | 66 | 332 | 1.40e-17 | 84.7 |
| Msa0366080 | MtrunA17_Chr4g0010331 | 26.259 | 278 | 179 | 8 | 68 | 332 | 55 | 319 | 3.72e-17 | 83.6 |
| Msa0366080 | MtrunA17_Chr4g0010351 | 27.076 | 277 | 182 | 7 | 68 | 331 | 55 | 324 | 8.16e-17 | 82.0 |
| Msa0366080 | MtrunA17_Chr3g0134061 | 26.224 | 286 | 181 | 8 | 69 | 334 | 69 | 344 | 9.51e-17 | 82.4 |
| Msa0366080 | MtrunA17_Chr3g0134111 | 26.316 | 285 | 178 | 11 | 68 | 334 | 65 | 335 | 1.20e-16 | 82.0 |
| Msa0366080 | MtrunA17_Chr4g0010311 | 26.756 | 299 | 196 | 10 | 68 | 352 | 55 | 344 | 1.59e-16 | 81.6 |
| Msa0366080 | MtrunA17_Chr2g0311401 | 24.062 | 320 | 198 | 12 | 150 | 452 | 6 | 297 | 8.64e-16 | 77.8 |
| Msa0366080 | MtrunA17_Chr4g0010381 | 25.448 | 279 | 193 | 6 | 63 | 331 | 50 | 323 | 9.58e-16 | 79.3 |
| Msa0366080 | MtrunA17_Chr4g0010361 | 27.465 | 284 | 172 | 11 | 68 | 331 | 55 | 324 | 1.97e-15 | 78.2 |
| Msa0366080 | MtrunA17_Chr5g0442721 | 24.688 | 401 | 259 | 14 | 54 | 426 | 55 | 440 | 5.16e-15 | 77.0 |
| Msa0366080 | MtrunA17_Chr8g0354371 | 24.444 | 270 | 184 | 6 | 68 | 329 | 64 | 321 | 2.10e-14 | 75.1 |
| Msa0366080 | MtrunA17_Chr3g0095731 | 24.841 | 314 | 211 | 11 | 68 | 364 | 65 | 370 | 6.93e-14 | 73.6 |
| Msa0366080 | MtrunA17_Chr3g0125001 | 25.725 | 276 | 179 | 8 | 68 | 331 | 55 | 316 | 3.30e-13 | 71.2 |
| Msa0366080 | MtrunA17_Chr4g0053111 | 24.542 | 273 | 189 | 8 | 68 | 329 | 62 | 328 | 1.84e-12 | 68.9 |
| Msa0366080 | MtrunA17_Chr3g0095721 | 24.375 | 320 | 202 | 10 | 68 | 364 | 72 | 374 | 2.43e-12 | 68.9 |
| Msa0366080 | MtrunA17_Chr3g0134101 | 24.468 | 282 | 167 | 10 | 68 | 334 | 86 | 336 | 1.46e-11 | 66.2 |
| Msa0366080 | MtrunA17_Chr3g0123061 | 23.195 | 457 | 296 | 19 | 8 | 457 | 3 | 411 | 2.13e-11 | 65.5 |
| Msa0366080 | MtrunA17_Chr5g0442691 | 25.000 | 312 | 211 | 10 | 68 | 364 | 89 | 392 | 2.55e-11 | 65.5 |
| Msa0366080 | MtrunA17_Chr7g0219291 | 23.100 | 329 | 215 | 9 | 69 | 363 | 417 | 741 | 5.76e-11 | 65.1 |
| Msa0366080 | MtrunA17_Chr5g0442701 | 24.038 | 312 | 214 | 9 | 68 | 364 | 66 | 369 | 7.48e-11 | 63.9 |
| Msa0366080 | MtrunA17_Chr8g0374641 | 24.727 | 275 | 183 | 10 | 68 | 329 | 59 | 322 | 8.35e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366080 | AT5G07080.1 | 38.758 | 467 | 239 | 15 | 8 | 457 | 12 | 448 | 3.90e-97 | 300 |
| Msa0366080 | AT2G25150.1 | 37.931 | 464 | 258 | 13 | 8 | 460 | 11 | 455 | 9.40e-93 | 289 |
| Msa0366080 | AT2G23510.1 | 37.609 | 460 | 257 | 15 | 8 | 457 | 11 | 450 | 1.40e-89 | 280 |
| Msa0366080 | AT3G47170.1 | 35.865 | 474 | 260 | 15 | 9 | 457 | 11 | 465 | 9.26e-84 | 266 |
| Msa0366080 | AT1G28680.1 | 34.573 | 457 | 269 | 13 | 10 | 455 | 4 | 441 | 6.20e-78 | 250 |
| Msa0366080 | AT1G28680.2 | 35.501 | 369 | 212 | 11 | 10 | 367 | 4 | 357 | 4.77e-65 | 215 |
| Msa0366080 | AT3G62160.1 | 29.574 | 399 | 240 | 13 | 16 | 405 | 11 | 377 | 3.43e-48 | 171 |
| Msa0366080 | AT5G41040.1 | 28.758 | 459 | 278 | 18 | 8 | 453 | 31 | 453 | 8.47e-47 | 168 |
| Msa0366080 | AT5G41040.2 | 28.166 | 458 | 282 | 17 | 8 | 453 | 15 | 437 | 1.03e-46 | 167 |
| Msa0366080 | AT3G48720.1 | 29.194 | 459 | 278 | 20 | 5 | 452 | 4 | 426 | 2.03e-43 | 158 |
| Msa0366080 | AT3G03480.1 | 29.018 | 448 | 280 | 15 | 17 | 454 | 26 | 445 | 2.04e-39 | 148 |
| Msa0366080 | AT5G63560.1 | 28.821 | 458 | 269 | 20 | 8 | 451 | 7 | 421 | 3.55e-37 | 141 |
| Msa0366080 | AT5G17540.1 | 27.115 | 461 | 279 | 15 | 17 | 457 | 16 | 439 | 1.81e-36 | 140 |
| Msa0366080 | AT2G40230.1 | 27.229 | 415 | 269 | 15 | 9 | 411 | 4 | 397 | 3.02e-33 | 130 |
| Msa0366080 | AT5G48930.1 | 26.667 | 420 | 259 | 16 | 8 | 406 | 1 | 392 | 1.62e-32 | 128 |
| Msa0366080 | AT1G27620.1 | 25.714 | 455 | 270 | 14 | 9 | 443 | 8 | 414 | 7.23e-31 | 124 |
| Msa0366080 | AT1G03390.1 | 24.883 | 426 | 287 | 16 | 20 | 432 | 32 | 437 | 1.63e-24 | 106 |
| Msa0366080 | AT1G65450.1 | 26.439 | 469 | 286 | 19 | 8 | 455 | 16 | 446 | 1.58e-23 | 103 |
| Msa0366080 | AT2G19070.1 | 29.512 | 410 | 248 | 19 | 67 | 454 | 57 | 447 | 1.76e-22 | 100 |
| Msa0366080 | AT5G57840.1 | 24.607 | 382 | 231 | 16 | 8 | 364 | 1 | 350 | 8.45e-21 | 95.1 |
| Msa0366080 | AT4G31910.1 | 26.087 | 414 | 249 | 20 | 28 | 408 | 29 | 418 | 4.36e-20 | 92.8 |
| Msa0366080 | AT5G07870.1 | 27.599 | 279 | 179 | 9 | 68 | 331 | 72 | 342 | 5.44e-17 | 83.6 |
| Msa0366080 | AT1G24430.1 | 24.880 | 418 | 234 | 21 | 69 | 461 | 63 | 425 | 2.22e-16 | 81.6 |
| Msa0366080 | AT5G07860.1 | 27.099 | 262 | 160 | 11 | 68 | 315 | 72 | 316 | 7.13e-16 | 80.1 |
| Msa0366080 | AT5G23940.1 | 28.626 | 262 | 165 | 12 | 68 | 315 | 65 | 318 | 3.98e-13 | 71.6 |
| Msa0366080 | AT5G07850.1 | 25.949 | 316 | 199 | 14 | 68 | 365 | 70 | 368 | 8.21e-13 | 70.5 |
| Msa0366080 | AT5G47950.1 | 32.143 | 196 | 101 | 10 | 7 | 191 | 3 | 177 | 1.51e-12 | 69.7 |
| Msa0366080 | AT3G26040.1 | 24.051 | 237 | 149 | 9 | 56 | 283 | 44 | 258 | 2.57e-12 | 68.9 |
| Msa0366080 | AT3G30280.1 | 22.981 | 483 | 295 | 23 | 7 | 461 | 3 | 436 | 3.28e-12 | 68.6 |
| Msa0366080 | AT5G23970.1 | 24.628 | 471 | 284 | 24 | 8 | 459 | 1 | 419 | 3.19e-11 | 65.5 |
Find 98 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTACCGAATGGATATTA+TGG | 0.139006 | 3_1:+60531438 | Msa0366080:CDS |
| CTTGATGGAAATGTAGATTT+TGG | 0.193112 | 3_1:+60531684 | Msa0366080:CDS |
| CCTTTCTTCTGTTAATTACT+TGG | 0.244140 | 3_1:+60530873 | Msa0366080:CDS |
| TCATCATTGTCAAATTTATT+AGG | 0.246582 | 3_1:-60531783 | None:intergenic |
| CATCTTTCATTTCAAGCATT+AGG | 0.254924 | 3_1:-60529868 | None:intergenic |
| TCCTTGTTCATAGGGCATTC+TGG | 0.255669 | 3_1:-60531156 | None:intergenic |
| TTGACAGAGTGGAAACATTT+AGG | 0.264666 | 3_1:+60531657 | Msa0366080:CDS |
| CTGTAGTGTTGTCTTGATTC+AGG | 0.273504 | 3_1:-60531200 | None:intergenic |
| CTCTGTGGTGGTTTCACAAT+TGG | 0.273752 | 3_1:+60530982 | Msa0366080:CDS |
| AACAATTCATGATTCTAATT+CGG | 0.274186 | 3_1:+60530006 | Msa0366080:CDS |
| TTAACCCCTCCTTTCATTGA+TGG | 0.282796 | 3_1:-60531807 | None:intergenic |
| AAATTATGGTGTTCCATTCT+TGG | 0.284915 | 3_1:+60530831 | Msa0366080:CDS |
| ACAATTCATGATTCTAATTC+GGG | 0.288860 | 3_1:+60530007 | Msa0366080:CDS |
| GCAACGGATTCCTTGTTCAT+AGG | 0.293428 | 3_1:-60531165 | None:intergenic |
| TGGGAAAGAGAGAGACTTAT+TGG | 0.299884 | 3_1:+60531111 | Msa0366080:CDS |
| TTCAATTTCCTCCTTGAACT+TGG | 0.303476 | 3_1:-60531862 | None:intergenic |
| AATCCTAATGCAGAAAATTA+TGG | 0.321826 | 3_1:+60530817 | Msa0366080:CDS |
| ATCTTTCATTTCAAGCATTA+GGG | 0.347223 | 3_1:-60529867 | None:intergenic |
| AACTTACCCTTTGGTGTTCA+AGG | 0.353325 | 3_1:+60530948 | Msa0366080:CDS |
| TTCATAGGGCATTCTGGAAA+TGG | 0.370345 | 3_1:-60531150 | None:intergenic |
| AACTTGGGCATGGCAGCAAC+AGG | 0.371483 | 3_1:-60531846 | None:intergenic |
| CACAGAAATTGCAAAGCATT+TGG | 0.379681 | 3_1:+60530906 | Msa0366080:CDS |
| CTTTACCGAATGGATATTAT+GGG | 0.389079 | 3_1:+60531439 | Msa0366080:CDS |
| TGAAGGAAAGTGGAAATATA+AGG | 0.398595 | 3_1:+60531286 | Msa0366080:CDS |
| TTAGCAATTGCTTCCAAGAA+TGG | 0.403315 | 3_1:-60530844 | None:intergenic |
| ATGCAACTTGTTTGCATCCA+TGG | 0.405507 | 3_1:+60531740 | Msa0366080:CDS |
| ACAACTTTCGAAGCGATTGC+AGG | 0.428496 | 3_1:+60531312 | Msa0366080:CDS |
| TGCTGCCATGCCCAAGTTCA+AGG | 0.433774 | 3_1:+60531851 | Msa0366080:CDS |
| TGAAGACAAAACTTACCCTT+TGG | 0.442212 | 3_1:+60530939 | Msa0366080:CDS |
| TCAATTTCCTCCTTGAACTT+GGG | 0.445520 | 3_1:-60531861 | None:intergenic |
| GCTTAAGTTGAGTTTGATGA+AGG | 0.461955 | 3_1:+60531269 | Msa0366080:CDS |
| TGGTGGTTTCACAATTGGAA+TGG | 0.473772 | 3_1:+60530987 | Msa0366080:CDS |
| TGGTATTAGACGCAACTTGA+AGG | 0.474505 | 3_1:+60531407 | Msa0366080:CDS |
| CCAAGTAATTAACAGAAGAA+AGG | 0.479071 | 3_1:-60530873 | None:intergenic |
| TCCCACACAGGTATCGTTGA+GGG | 0.482806 | 3_1:-60531093 | None:intergenic |
| CAAGTAATTAACAGAAGAAA+GGG | 0.485197 | 3_1:-60530872 | None:intergenic |
| CCATAATATCCATTCGGTAA+AGG | 0.486413 | 3_1:-60531438 | None:intergenic |
| CAACGGATTCCTTGTTCATA+GGG | 0.488857 | 3_1:-60531164 | None:intergenic |
| TTGAGTTTGATGAAGGAAAG+TGG | 0.489083 | 3_1:+60531276 | Msa0366080:CDS |
| TTGTCACCTTGAACACCAAA+GGG | 0.494129 | 3_1:-60530954 | None:intergenic |
| CGAATTATAACGAGGAATCA+AGG | 0.497566 | 3_1:+60531607 | Msa0366080:CDS |
| CTCAAACTGTTCATGTATAC+CGG | 0.499140 | 3_1:+60529978 | Msa0366080:CDS |
| GTGACAAAATTTCTCTGTGG+TGG | 0.512895 | 3_1:+60530970 | Msa0366080:CDS |
| GGTGGTTTCACAATTGGAAT+GGG | 0.517933 | 3_1:+60530988 | Msa0366080:CDS |
| ATTCAAAGAAGCACTTTCAA+AGG | 0.519773 | 3_1:+60530048 | Msa0366080:CDS |
| AATCATGAATTGTTGATGAC+CGG | 0.519842 | 3_1:-60529997 | None:intergenic |
| ATGCTTTGCAATTTCTGTGT+CGG | 0.522721 | 3_1:-60530902 | None:intergenic |
| TCTACGTCTTGCAGGTAGAA+TGG | 0.526428 | 3_1:+60530756 | Msa0366080:intron |
| ACATCATAATTGAAACACTA+AGG | 0.527670 | 3_1:-60531936 | None:intergenic |
| TTCCTCCTTGAACTTGGGCA+TGG | 0.531730 | 3_1:-60531856 | None:intergenic |
| GGTAGCTGTTTGATAAGCCA+TGG | 0.532393 | 3_1:-60529846 | None:intergenic |
| TGTTTGATAAGCCATGGAAA+AGG | 0.534654 | 3_1:-60529840 | None:intergenic |
| GAATTCCCATAATATCCATT+CGG | 0.538367 | 3_1:-60531444 | None:intergenic |
| TTTGTCACCTTGAACACCAA+AGG | 0.540211 | 3_1:-60530955 | None:intergenic |
| TCATTGTCAAATTTATTAGG+AGG | 0.540817 | 3_1:-60531780 | None:intergenic |
| ATGGTGAAACATGCTGATGA+TGG | 0.543171 | 3_1:+60530775 | Msa0366080:CDS |
| GCAAACAAGTTGCATGGTGC+TGG | 0.545202 | 3_1:-60531732 | None:intergenic |
| AGCGATTATCGAACTTGCAA+AGG | 0.548781 | 3_1:+60531059 | Msa0366080:CDS |
| GCGATTATCGAACTTGCAAA+GGG | 0.548793 | 3_1:+60531060 | Msa0366080:CDS |
| GAATCAAGGATGCTAAGTAC+TGG | 0.553010 | 3_1:+60531621 | Msa0366080:CDS |
| GAAAGTGAAAGGATACAAGA+AGG | 0.556726 | 3_1:-60529920 | None:intergenic |
| ATGATCCATCAATGAAAGGA+GGG | 0.556848 | 3_1:+60531802 | Msa0366080:CDS |
| TGTCAATTGTAGAAAGTGAA+AGG | 0.557874 | 3_1:-60529931 | None:intergenic |
| GCTAAGTACTGGTGCAGTAA+CGG | 0.563324 | 3_1:+60531632 | Msa0366080:CDS |
| AATGATGATCCATCAATGAA+AGG | 0.575055 | 3_1:+60531798 | Msa0366080:CDS |
| AGGTTAATAATTTCATAGAG+TGG | 0.575699 | 3_1:-60531516 | None:intergenic |
| TTCCCACACAGGTATCGTTG+AGG | 0.581316 | 3_1:-60531094 | None:intergenic |
| TCCAGAATGCCCTATGAACA+AGG | 0.582940 | 3_1:+60531155 | Msa0366080:CDS |
| AAGCGATTGCAGGTTATGTG+TGG | 0.585990 | 3_1:+60531322 | Msa0366080:CDS |
| GTGTTGTCTTGATTCAGGTA+AGG | 0.593872 | 3_1:-60531195 | None:intergenic |
| AAACCTAGTATACCTGCAAG+AGG | 0.599532 | 3_1:-60530088 | None:intergenic |
| GCGTCTAATACCAGCTACAA+TGG | 0.604485 | 3_1:-60531397 | None:intergenic |
| GCCCTAAAACTTAACAACAA+TGG | 0.606771 | 3_1:+60531360 | Msa0366080:CDS |
| TAGTAGTGAAGTGCTTGTAA+TGG | 0.608350 | 3_1:+60532061 | Msa0366080:three_prime_UTR |
| GAAAAGGTTTATGAGAAATG+TGG | 0.614216 | 3_1:-60529824 | None:intergenic |
| CAGGTAAGGTGAAAATGCAA+CGG | 0.615018 | 3_1:-60531181 | None:intergenic |
| ATACATGAACAGTTTGAGCA+AGG | 0.620162 | 3_1:-60529973 | None:intergenic |
| AAGTTAGTGAGCTCAATGAA+AGG | 0.624470 | 3_1:+60531493 | Msa0366080:CDS |
| CACGCTATCTGTGACGGAGT+TGG | 0.625478 | 3_1:+60531018 | Msa0366080:CDS |
| GATGATCCATCAATGAAAGG+AGG | 0.631222 | 3_1:+60531801 | Msa0366080:CDS |
| GCTTCTTTGAATACATGACA+AGG | 0.632259 | 3_1:-60530037 | None:intergenic |
| TGGAGGGTGAAATGATAACA+AGG | 0.634756 | 3_1:+60531247 | Msa0366080:CDS |
| AGTCTCTCTCTTTCCCACAC+AGG | 0.635132 | 3_1:-60531105 | None:intergenic |
| GTGTTGCACGCTATCTGTGA+CGG | 0.635854 | 3_1:+60531012 | Msa0366080:CDS |
| GCCCTCAACGATACCTGTGT+GGG | 0.636031 | 3_1:+60531092 | Msa0366080:CDS |
| CGATTGCAGGTTATGTGTGG+AGG | 0.638354 | 3_1:+60531325 | Msa0366080:CDS |
| ACAGTGCTGACCATTGTAGC+TGG | 0.644789 | 3_1:+60531387 | Msa0366080:CDS |
| GGTTTATGAGAAATGTGGCA+AGG | 0.648116 | 3_1:-60529819 | None:intergenic |
| AGCCCTCAACGATACCTGTG+TGG | 0.649840 | 3_1:+60531091 | Msa0366080:CDS |
| TGATCCATCAATGAAAGGAG+GGG | 0.653576 | 3_1:+60531803 | Msa0366080:CDS |
| ACTTGGGCATGGCAGCAACA+GGG | 0.669220 | 3_1:-60531845 | None:intergenic |
| CTTCTTTGAATACATGACAA+GGG | 0.672661 | 3_1:-60530036 | None:intergenic |
| ATGGATGCAAACAAGTTGCA+TGG | 0.674965 | 3_1:-60531738 | None:intergenic |
| AAGGCAACTTCAACTGAACG+TGG | 0.681677 | 3_1:-60531917 | None:intergenic |
| ATATTATGGGAATTCATGTG+TGG | 0.696693 | 3_1:+60531452 | Msa0366080:CDS |
| AAGGTGACAAAATTTCTCTG+TGG | 0.714300 | 3_1:+60530967 | Msa0366080:CDS |
| TGCCATGCCCAAGTTCAAGG+AGG | 0.747229 | 3_1:+60531854 | Msa0366080:CDS |
| GTTGGAGACGAATTATAACG+AGG | 0.787236 | 3_1:+60531599 | Msa0366080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATTTTAATAAAAATTT+TGG | + | chr3_1:60530252-60530271 | Msa0366080:intron | 0.0% |
| !!! | TAAATTTTAATAAAAATTTT+GGG | + | chr3_1:60530253-60530272 | Msa0366080:intron | 0.0% |
| !!! | ATAAATTTTAATAAAAATTT+TGG | + | chr3_1:60530252-60530271 | Msa0366080:intron | 0.0% |
| !!! | TAAATTTTAATAAAAATTTT+GGG | + | chr3_1:60530253-60530272 | Msa0366080:intron | 0.0% |
| !! | TTATAAGAAAAAAAATGATT+AGG | - | chr3_1:60530236-60530255 | None:intergenic | 10.0% |
| !!! | AAATTATGATTTTGTTTTAT+AGG | - | chr3_1:60530352-60530371 | None:intergenic | 10.0% |
| !!! | ATAGTCTTTTTTTTTTTTTT+TGG | + | chr3_1:60530588-60530607 | Msa0366080:intron | 10.0% |
| !! | TTATAAGAAAAAAAATGATT+AGG | - | chr3_1:60530236-60530255 | None:intergenic | 10.0% |
| !!! | AAATTATGATTTTGTTTTAT+AGG | - | chr3_1:60530352-60530371 | None:intergenic | 10.0% |
| !!! | ATAGTCTTTTTTTTTTTTTT+TGG | + | chr3_1:60530588-60530607 | Msa0366080:intron | 10.0% |
| !! | AAACATTTGTATTTAATGAA+AGG | - | chr3_1:60530122-60530141 | None:intergenic | 15.0% |
| !!! | AAATTAGTGTTGTTAAAATA+TGG | + | chr3_1:60530143-60530162 | Msa0366080:intron | 15.0% |
| !! | ATCTACCAAAAAAAAAAATA+TGG | + | chr3_1:60530174-60530193 | Msa0366080:intron | 15.0% |
| !!! | TAATATAAACCTTTAAAAGA+GGG | + | chr3_1:60530204-60530223 | Msa0366080:intron | 15.0% |
| !!! | GAAATATATTTTTTTAGATG+AGG | + | chr3_1:60530279-60530298 | Msa0366080:intron | 15.0% |
| !! | TGAAATTCTGAATATTTATA+AGG | - | chr3_1:60530322-60530341 | None:intergenic | 15.0% |
| !!! | ATGTTGACATAAAATTTTAA+AGG | - | chr3_1:60530381-60530400 | None:intergenic | 15.0% |
| !!! | AAAATTTATGTTAGCATTTT+CGG | + | chr3_1:60530445-60530464 | Msa0366080:intron | 15.0% |
| !!! | AAATGTGATTTTATTTTGTA+AGG | + | chr3_1:60530505-60530524 | Msa0366080:intron | 15.0% |
| !!! | AAAAAAGACTATCATATTTT+GGG | - | chr3_1:60530580-60530599 | None:intergenic | 15.0% |
| !!! | AAAAAAAGACTATCATATTT+TGG | - | chr3_1:60530581-60530600 | None:intergenic | 15.0% |
| !! | TTTCATAAAATATTCAAAAG+TGG | - | chr3_1:60530676-60530695 | None:intergenic | 15.0% |
| !! | TATTAGAATGTCAATAAAAA+TGG | + | chr3_1:60530701-60530720 | Msa0366080:intron | 15.0% |
| !!! | GAAGAAATATTGTTTTAATA+TGG | + | chr3_1:60531227-60531246 | Msa0366080:CDS | 15.0% |
| !!! | AAATATTGTTTTAATATGGA+GGG | + | chr3_1:60531231-60531250 | Msa0366080:CDS | 15.0% |
| !! | AAACATTTGTATTTAATGAA+AGG | - | chr3_1:60530122-60530141 | None:intergenic | 15.0% |
| !!! | AAATTAGTGTTGTTAAAATA+TGG | + | chr3_1:60530143-60530162 | Msa0366080:intron | 15.0% |
| !! | ATCTACCAAAAAAAAAAATA+TGG | + | chr3_1:60530174-60530193 | Msa0366080:intron | 15.0% |
| !!! | TAATATAAACCTTTAAAAGA+GGG | + | chr3_1:60530204-60530223 | Msa0366080:intron | 15.0% |
| !!! | GAAATATATTTTTTTAGATG+AGG | + | chr3_1:60530279-60530298 | Msa0366080:intron | 15.0% |
| !! | TGAAATTCTGAATATTTATA+AGG | - | chr3_1:60530322-60530341 | None:intergenic | 15.0% |
| !!! | ATGTTGACATAAAATTTTAA+AGG | - | chr3_1:60530381-60530400 | None:intergenic | 15.0% |
| !!! | AAAATTTATGTTAGCATTTT+CGG | + | chr3_1:60530445-60530464 | Msa0366080:intron | 15.0% |
| !!! | AAATGTGATTTTATTTTGTA+AGG | + | chr3_1:60530505-60530524 | Msa0366080:intron | 15.0% |
| !!! | AAAAAAGACTATCATATTTT+GGG | - | chr3_1:60530580-60530599 | None:intergenic | 15.0% |
| !!! | AAAAAAAGACTATCATATTT+TGG | - | chr3_1:60530581-60530600 | None:intergenic | 15.0% |
| !! | TTTCATAAAATATTCAAAAG+TGG | - | chr3_1:60530676-60530695 | None:intergenic | 15.0% |
| !! | TATTAGAATGTCAATAAAAA+TGG | + | chr3_1:60530701-60530720 | Msa0366080:intron | 15.0% |
| !!! | GAAGAAATATTGTTTTAATA+TGG | + | chr3_1:60531227-60531246 | Msa0366080:CDS | 15.0% |
| !!! | AAATATTGTTTTAATATGGA+GGG | + | chr3_1:60531231-60531250 | Msa0366080:CDS | 15.0% |
| !! | AACAATTCATGATTCTAATT+CGG | + | chr3_1:60530006-60530025 | Msa0366080:CDS | 20.0% |
| !!! | TTTTTTTTTTTGGTAGATAG+AGG | - | chr3_1:60530172-60530191 | None:intergenic | 20.0% |
| !!! | CTTTTAAAGGTTTATATTAG+AGG | - | chr3_1:60530203-60530222 | None:intergenic | 20.0% |
| !!! | CTAATATAAACCTTTAAAAG+AGG | + | chr3_1:60530203-60530222 | Msa0366080:intron | 20.0% |
| !!! | TGCTAATGGAAAATTTTAAA+AGG | - | chr3_1:60530411-60530430 | None:intergenic | 20.0% |
| !!! | ATGCTAACATAAATTTTACA+AGG | - | chr3_1:60530442-60530461 | None:intergenic | 20.0% |
| !!! | TGCAATTTTTCGTAAAATAA+TGG | - | chr3_1:60530648-60530667 | None:intergenic | 20.0% |
| !!! | TATTTTACGAAAAATTGCAA+TGG | + | chr3_1:60530649-60530668 | Msa0366080:intron | 20.0% |
| !!! | GTCAATAAAAATGGATTTTA+TGG | + | chr3_1:60530710-60530729 | Msa0366080:intron | 20.0% |
| !!! | GAAATATTGTTTTAATATGG+AGG | + | chr3_1:60531230-60531249 | Msa0366080:CDS | 20.0% |
| !!! | TGAATTTTTGACAAAATTAG+TGG | - | chr3_1:60531571-60531590 | None:intergenic | 20.0% |
| !! | TCATCATTGTCAAATTTATT+AGG | - | chr3_1:60531786-60531805 | None:intergenic | 20.0% |
| !!! | CTTTTCATCAAAAAACAAAT+TGG | + | chr3_1:60532154-60532173 | Msa0366080:three_prime_UTR | 20.0% |
| !! | AACAATTCATGATTCTAATT+CGG | + | chr3_1:60530006-60530025 | Msa0366080:CDS | 20.0% |
| !!! | TTTTTTTTTTTGGTAGATAG+AGG | - | chr3_1:60530172-60530191 | None:intergenic | 20.0% |
| !!! | CTTTTAAAGGTTTATATTAG+AGG | - | chr3_1:60530203-60530222 | None:intergenic | 20.0% |
| !!! | CTAATATAAACCTTTAAAAG+AGG | + | chr3_1:60530203-60530222 | Msa0366080:intron | 20.0% |
| !!! | TGCTAATGGAAAATTTTAAA+AGG | - | chr3_1:60530411-60530430 | None:intergenic | 20.0% |
| !!! | ATGCTAACATAAATTTTACA+AGG | - | chr3_1:60530442-60530461 | None:intergenic | 20.0% |
| !!! | TGCAATTTTTCGTAAAATAA+TGG | - | chr3_1:60530648-60530667 | None:intergenic | 20.0% |
| !!! | TATTTTACGAAAAATTGCAA+TGG | + | chr3_1:60530649-60530668 | Msa0366080:intron | 20.0% |
| !!! | GTCAATAAAAATGGATTTTA+TGG | + | chr3_1:60530710-60530729 | Msa0366080:intron | 20.0% |
| !!! | GAAATATTGTTTTAATATGG+AGG | + | chr3_1:60531230-60531249 | Msa0366080:CDS | 20.0% |
| !!! | TGAATTTTTGACAAAATTAG+TGG | - | chr3_1:60531571-60531590 | None:intergenic | 20.0% |
| !! | TCATCATTGTCAAATTTATT+AGG | - | chr3_1:60531786-60531805 | None:intergenic | 20.0% |
| !!! | CTTTTCATCAAAAAACAAAT+TGG | + | chr3_1:60532154-60532173 | Msa0366080:three_prime_UTR | 20.0% |
| ! | ATCTTTCATTTCAAGCATTA+GGG | - | chr3_1:60529870-60529889 | None:intergenic | 25.0% |
| ! | ACAATTCATGATTCTAATTC+GGG | + | chr3_1:60530007-60530026 | Msa0366080:CDS | 25.0% |
| !! | TTTTATTATTATCCTCTTGC+AGG | + | chr3_1:60530076-60530095 | Msa0366080:CDS | 25.0% |
| !!! | GGCATCCATATTTTTTTTTT+TGG | - | chr3_1:60530182-60530201 | None:intergenic | 25.0% |
| ! | GATGAGGTTAGATATATATT+TGG | + | chr3_1:60530295-60530314 | Msa0366080:intron | 25.0% |
| !! | ATTTTCCTTTAGCATTTTTG+AGG | - | chr3_1:60530472-60530491 | None:intergenic | 25.0% |
| ! | AATCCTAATGCAGAAAATTA+TGG | + | chr3_1:60530817-60530836 | Msa0366080:CDS | 25.0% |
| ! | CAAGTAATTAACAGAAGAAA+GGG | - | chr3_1:60530875-60530894 | None:intergenic | 25.0% |
| !!! | ACCATTGTTGTTAAGTTTTA+GGG | - | chr3_1:60531364-60531383 | None:intergenic | 25.0% |
| ! | AGGTTAATAATTTCATAGAG+TGG | - | chr3_1:60531519-60531538 | None:intergenic | 25.0% |
| !! | ATTTTTGACAAAATTAGTGG+TGG | - | chr3_1:60531568-60531587 | None:intergenic | 25.0% |
| !!! | AAACATTTAGGTTTTCTTGA+TGG | + | chr3_1:60531669-60531688 | Msa0366080:CDS | 25.0% |
| ! | TCATTGTCAAATTTATTAGG+AGG | - | chr3_1:60531783-60531802 | None:intergenic | 25.0% |
| ! | ACATCATAATTGAAACACTA+AGG | - | chr3_1:60531939-60531958 | None:intergenic | 25.0% |
| !! | GTGTCAAGAGAAATAATTTT+AGG | + | chr3_1:60532012-60532031 | Msa0366080:three_prime_UTR | 25.0% |
| ! | GTATGAAAAAGATGATGTAT+TGG | - | chr3_1:60532119-60532138 | None:intergenic | 25.0% |
| ! | ATCTTTCATTTCAAGCATTA+GGG | - | chr3_1:60529870-60529889 | None:intergenic | 25.0% |
| ! | ACAATTCATGATTCTAATTC+GGG | + | chr3_1:60530007-60530026 | Msa0366080:CDS | 25.0% |
| !! | TTTTATTATTATCCTCTTGC+AGG | + | chr3_1:60530076-60530095 | Msa0366080:CDS | 25.0% |
| !!! | GGCATCCATATTTTTTTTTT+TGG | - | chr3_1:60530182-60530201 | None:intergenic | 25.0% |
| ! | GATGAGGTTAGATATATATT+TGG | + | chr3_1:60530295-60530314 | Msa0366080:intron | 25.0% |
| !! | ATTTTCCTTTAGCATTTTTG+AGG | - | chr3_1:60530472-60530491 | None:intergenic | 25.0% |
| ! | AATCCTAATGCAGAAAATTA+TGG | + | chr3_1:60530817-60530836 | Msa0366080:CDS | 25.0% |
| ! | CAAGTAATTAACAGAAGAAA+GGG | - | chr3_1:60530875-60530894 | None:intergenic | 25.0% |
| !!! | ACCATTGTTGTTAAGTTTTA+GGG | - | chr3_1:60531364-60531383 | None:intergenic | 25.0% |
| ! | AGGTTAATAATTTCATAGAG+TGG | - | chr3_1:60531519-60531538 | None:intergenic | 25.0% |
| !! | ATTTTTGACAAAATTAGTGG+TGG | - | chr3_1:60531568-60531587 | None:intergenic | 25.0% |
| !!! | AAACATTTAGGTTTTCTTGA+TGG | + | chr3_1:60531669-60531688 | Msa0366080:CDS | 25.0% |
| ! | TCATTGTCAAATTTATTAGG+AGG | - | chr3_1:60531783-60531802 | None:intergenic | 25.0% |
| ! | ACATCATAATTGAAACACTA+AGG | - | chr3_1:60531939-60531958 | None:intergenic | 25.0% |
| !! | GTGTCAAGAGAAATAATTTT+AGG | + | chr3_1:60532012-60532031 | Msa0366080:three_prime_UTR | 25.0% |
| ! | GTATGAAAAAGATGATGTAT+TGG | - | chr3_1:60532119-60532138 | None:intergenic | 25.0% |
| GAAAAGGTTTATGAGAAATG+TGG | - | chr3_1:60529827-60529846 | None:intergenic | 30.0% | |
| ! | TTTCTCATAAACCTTTTCCA+TGG | + | chr3_1:60529829-60529848 | Msa0366080:exon | 30.0% |
| CATCTTTCATTTCAAGCATT+AGG | - | chr3_1:60529871-60529890 | None:intergenic | 30.0% | |
| !! | CAAGAAGGAATTGATTTTGA+TGG | - | chr3_1:60529908-60529927 | None:intergenic | 30.0% |
| TGTCAATTGTAGAAAGTGAA+AGG | - | chr3_1:60529934-60529953 | None:intergenic | 30.0% | |
| !! | AATCATGAATTGTTGATGAC+CGG | - | chr3_1:60530000-60530019 | None:intergenic | 30.0% |
| CTTCTTTGAATACATGACAA+GGG | - | chr3_1:60530039-60530058 | None:intergenic | 30.0% | |
| !! | ATTCAAAGAAGCACTTTCAA+AGG | + | chr3_1:60530048-60530067 | Msa0366080:CDS | 30.0% |
| ACAAGGACTAAAAATGCTAA+TGG | - | chr3_1:60530425-60530444 | None:intergenic | 30.0% | |
| ! | ACACCATAATTTTCTGCATT+AGG | - | chr3_1:60530823-60530842 | None:intergenic | 30.0% |
| AAATTATGGTGTTCCATTCT+TGG | + | chr3_1:60530831-60530850 | Msa0366080:CDS | 30.0% | |
| CCAAGTAATTAACAGAAGAA+AGG | - | chr3_1:60530876-60530895 | None:intergenic | 30.0% | |
| CCTTTCTTCTGTTAATTACT+TGG | + | chr3_1:60530873-60530892 | Msa0366080:CDS | 30.0% | |
| TGAAGGAAAGTGGAAATATA+AGG | + | chr3_1:60531286-60531305 | Msa0366080:CDS | 30.0% | |
| !! | CACCATTGTTGTTAAGTTTT+AGG | - | chr3_1:60531365-60531384 | None:intergenic | 30.0% |
| CTTTACCGAATGGATATTAT+GGG | + | chr3_1:60531439-60531458 | Msa0366080:CDS | 30.0% | |
| GAATTCCCATAATATCCATT+CGG | - | chr3_1:60531447-60531466 | None:intergenic | 30.0% | |
| ATATTATGGGAATTCATGTG+TGG | + | chr3_1:60531452-60531471 | Msa0366080:CDS | 30.0% | |
| !!! | TGTTTTTAGTCTCTCTTATC+AGG | - | chr3_1:60531539-60531558 | None:intergenic | 30.0% |
| CAAAAATTCAATCAACACGT+TGG | + | chr3_1:60531581-60531600 | Msa0366080:CDS | 30.0% | |
| ! | CTTGATGGAAATGTAGATTT+TGG | + | chr3_1:60531684-60531703 | Msa0366080:CDS | 30.0% |
| ! | ATGGAAATGTAGATTTTGGA+GGG | + | chr3_1:60531688-60531707 | Msa0366080:CDS | 30.0% |
| TGTAAAAATGCTCATTTCCA+TGG | - | chr3_1:60531760-60531779 | None:intergenic | 30.0% | |
| AATGATGATCCATCAATGAA+AGG | + | chr3_1:60531798-60531817 | Msa0366080:CDS | 30.0% | |
| GAAAAGGTTTATGAGAAATG+TGG | - | chr3_1:60529827-60529846 | None:intergenic | 30.0% | |
| ! | TTTCTCATAAACCTTTTCCA+TGG | + | chr3_1:60529829-60529848 | Msa0366080:exon | 30.0% |
| CATCTTTCATTTCAAGCATT+AGG | - | chr3_1:60529871-60529890 | None:intergenic | 30.0% | |
| !! | CAAGAAGGAATTGATTTTGA+TGG | - | chr3_1:60529908-60529927 | None:intergenic | 30.0% |
| TGTCAATTGTAGAAAGTGAA+AGG | - | chr3_1:60529934-60529953 | None:intergenic | 30.0% | |
| !! | AATCATGAATTGTTGATGAC+CGG | - | chr3_1:60530000-60530019 | None:intergenic | 30.0% |
| CTTCTTTGAATACATGACAA+GGG | - | chr3_1:60530039-60530058 | None:intergenic | 30.0% | |
| !! | ATTCAAAGAAGCACTTTCAA+AGG | + | chr3_1:60530048-60530067 | Msa0366080:CDS | 30.0% |
| ACAAGGACTAAAAATGCTAA+TGG | - | chr3_1:60530425-60530444 | None:intergenic | 30.0% | |
| ! | ACACCATAATTTTCTGCATT+AGG | - | chr3_1:60530823-60530842 | None:intergenic | 30.0% |
| AAATTATGGTGTTCCATTCT+TGG | + | chr3_1:60530831-60530850 | Msa0366080:CDS | 30.0% | |
| CCAAGTAATTAACAGAAGAA+AGG | - | chr3_1:60530876-60530895 | None:intergenic | 30.0% | |
| CCTTTCTTCTGTTAATTACT+TGG | + | chr3_1:60530873-60530892 | Msa0366080:CDS | 30.0% | |
| TGAAGGAAAGTGGAAATATA+AGG | + | chr3_1:60531286-60531305 | Msa0366080:CDS | 30.0% | |
| !! | CACCATTGTTGTTAAGTTTT+AGG | - | chr3_1:60531365-60531384 | None:intergenic | 30.0% |
| CTTTACCGAATGGATATTAT+GGG | + | chr3_1:60531439-60531458 | Msa0366080:CDS | 30.0% | |
| GAATTCCCATAATATCCATT+CGG | - | chr3_1:60531447-60531466 | None:intergenic | 30.0% | |
| ATATTATGGGAATTCATGTG+TGG | + | chr3_1:60531452-60531471 | Msa0366080:CDS | 30.0% | |
| !!! | TGTTTTTAGTCTCTCTTATC+AGG | - | chr3_1:60531539-60531558 | None:intergenic | 30.0% |
| CAAAAATTCAATCAACACGT+TGG | + | chr3_1:60531581-60531600 | Msa0366080:CDS | 30.0% | |
| ! | CTTGATGGAAATGTAGATTT+TGG | + | chr3_1:60531684-60531703 | Msa0366080:CDS | 30.0% |
| ! | ATGGAAATGTAGATTTTGGA+GGG | + | chr3_1:60531688-60531707 | Msa0366080:CDS | 30.0% |
| TGTAAAAATGCTCATTTCCA+TGG | - | chr3_1:60531760-60531779 | None:intergenic | 30.0% | |
| AATGATGATCCATCAATGAA+AGG | + | chr3_1:60531798-60531817 | Msa0366080:CDS | 30.0% | |
| TGTTTGATAAGCCATGGAAA+AGG | - | chr3_1:60529843-60529862 | None:intergenic | 35.0% | |
| GAAAGTGAAAGGATACAAGA+AGG | - | chr3_1:60529923-60529942 | None:intergenic | 35.0% | |
| ATACATGAACAGTTTGAGCA+AGG | - | chr3_1:60529976-60529995 | None:intergenic | 35.0% | |
| CTCAAACTGTTCATGTATAC+CGG | + | chr3_1:60529978-60529997 | Msa0366080:CDS | 35.0% | |
| GCTTCTTTGAATACATGACA+AGG | - | chr3_1:60530040-60530059 | None:intergenic | 35.0% | |
| ! | AGGTATACACCCTCTTTTAA+AGG | - | chr3_1:60530216-60530235 | None:intergenic | 35.0% |
| TTAGCAATTGCTTCCAAGAA+TGG | - | chr3_1:60530847-60530866 | None:intergenic | 35.0% | |
| ATGCTTTGCAATTTCTGTGT+CGG | - | chr3_1:60530905-60530924 | None:intergenic | 35.0% | |
| ! | CACAGAAATTGCAAAGCATT+TGG | + | chr3_1:60530906-60530925 | Msa0366080:CDS | 35.0% |
| TGAAGACAAAACTTACCCTT+TGG | + | chr3_1:60530939-60530958 | Msa0366080:CDS | 35.0% | |
| AAGGTGACAAAATTTCTCTG+TGG | + | chr3_1:60530967-60530986 | Msa0366080:CDS | 35.0% | |
| !! | GCTTAAGTTGAGTTTGATGA+AGG | + | chr3_1:60531269-60531288 | Msa0366080:CDS | 35.0% |
| TTGAGTTTGATGAAGGAAAG+TGG | + | chr3_1:60531276-60531295 | Msa0366080:CDS | 35.0% | |
| GCCCTAAAACTTAACAACAA+TGG | + | chr3_1:60531360-60531379 | Msa0366080:CDS | 35.0% | |
| !! | GATTTTGATCCTTTACCGAA+TGG | + | chr3_1:60531429-60531448 | Msa0366080:CDS | 35.0% |
| CCATAATATCCATTCGGTAA+AGG | - | chr3_1:60531441-60531460 | None:intergenic | 35.0% | |
| CCTTTACCGAATGGATATTA+TGG | + | chr3_1:60531438-60531457 | Msa0366080:CDS | 35.0% | |
| AAGTTAGTGAGCTCAATGAA+AGG | + | chr3_1:60531493-60531512 | Msa0366080:CDS | 35.0% | |
| CGAATTATAACGAGGAATCA+AGG | + | chr3_1:60531607-60531626 | Msa0366080:CDS | 35.0% | |
| TTGACAGAGTGGAAACATTT+AGG | + | chr3_1:60531657-60531676 | Msa0366080:CDS | 35.0% | |
| ! | GATGGAAATGTAGATTTTGG+AGG | + | chr3_1:60531687-60531706 | Msa0366080:CDS | 35.0% |
| ATGATCCATCAATGAAAGGA+GGG | + | chr3_1:60531802-60531821 | Msa0366080:CDS | 35.0% | |
| TCAATTTCCTCCTTGAACTT+GGG | - | chr3_1:60531864-60531883 | None:intergenic | 35.0% | |
| TTCAATTTCCTCCTTGAACT+TGG | - | chr3_1:60531865-60531884 | None:intergenic | 35.0% | |
| ! | TAGTAGTGAAGTGCTTGTAA+TGG | + | chr3_1:60532061-60532080 | Msa0366080:three_prime_UTR | 35.0% |
| TGTTTGATAAGCCATGGAAA+AGG | - | chr3_1:60529843-60529862 | None:intergenic | 35.0% | |
| GAAAGTGAAAGGATACAAGA+AGG | - | chr3_1:60529923-60529942 | None:intergenic | 35.0% | |
| ATACATGAACAGTTTGAGCA+AGG | - | chr3_1:60529976-60529995 | None:intergenic | 35.0% | |
| CTCAAACTGTTCATGTATAC+CGG | + | chr3_1:60529978-60529997 | Msa0366080:CDS | 35.0% | |
| GCTTCTTTGAATACATGACA+AGG | - | chr3_1:60530040-60530059 | None:intergenic | 35.0% | |
| ! | AGGTATACACCCTCTTTTAA+AGG | - | chr3_1:60530216-60530235 | None:intergenic | 35.0% |
| TTAGCAATTGCTTCCAAGAA+TGG | - | chr3_1:60530847-60530866 | None:intergenic | 35.0% | |
| ATGCTTTGCAATTTCTGTGT+CGG | - | chr3_1:60530905-60530924 | None:intergenic | 35.0% | |
| ! | CACAGAAATTGCAAAGCATT+TGG | + | chr3_1:60530906-60530925 | Msa0366080:CDS | 35.0% |
| TGAAGACAAAACTTACCCTT+TGG | + | chr3_1:60530939-60530958 | Msa0366080:CDS | 35.0% | |
| AAGGTGACAAAATTTCTCTG+TGG | + | chr3_1:60530967-60530986 | Msa0366080:CDS | 35.0% | |
| !! | GCTTAAGTTGAGTTTGATGA+AGG | + | chr3_1:60531269-60531288 | Msa0366080:CDS | 35.0% |
| TTGAGTTTGATGAAGGAAAG+TGG | + | chr3_1:60531276-60531295 | Msa0366080:CDS | 35.0% | |
| GCCCTAAAACTTAACAACAA+TGG | + | chr3_1:60531360-60531379 | Msa0366080:CDS | 35.0% | |
| !! | GATTTTGATCCTTTACCGAA+TGG | + | chr3_1:60531429-60531448 | Msa0366080:CDS | 35.0% |
| CCATAATATCCATTCGGTAA+AGG | - | chr3_1:60531441-60531460 | None:intergenic | 35.0% | |
| CCTTTACCGAATGGATATTA+TGG | + | chr3_1:60531438-60531457 | Msa0366080:CDS | 35.0% | |
| AAGTTAGTGAGCTCAATGAA+AGG | + | chr3_1:60531493-60531512 | Msa0366080:CDS | 35.0% | |
| CGAATTATAACGAGGAATCA+AGG | + | chr3_1:60531607-60531626 | Msa0366080:CDS | 35.0% | |
| TTGACAGAGTGGAAACATTT+AGG | + | chr3_1:60531657-60531676 | Msa0366080:CDS | 35.0% | |
| ! | GATGGAAATGTAGATTTTGG+AGG | + | chr3_1:60531687-60531706 | Msa0366080:CDS | 35.0% |
| ATGATCCATCAATGAAAGGA+GGG | + | chr3_1:60531802-60531821 | Msa0366080:CDS | 35.0% | |
| TCAATTTCCTCCTTGAACTT+GGG | - | chr3_1:60531864-60531883 | None:intergenic | 35.0% | |
| TTCAATTTCCTCCTTGAACT+TGG | - | chr3_1:60531865-60531884 | None:intergenic | 35.0% | |
| ! | TAGTAGTGAAGTGCTTGTAA+TGG | + | chr3_1:60532061-60532080 | Msa0366080:three_prime_UTR | 35.0% |
| GGTTTATGAGAAATGTGGCA+AGG | - | chr3_1:60529822-60529841 | None:intergenic | 40.0% | |
| TATCCTCTTGCAGGTATACT+AGG | + | chr3_1:60530085-60530104 | Msa0366080:intron | 40.0% | |
| AAACCTAGTATACCTGCAAG+AGG | - | chr3_1:60530091-60530110 | None:intergenic | 40.0% | |
| TCGGTCCTCAAAAATGCTAA+AGG | + | chr3_1:60530464-60530483 | Msa0366080:intron | 40.0% | |
| AACATATCTCTACGTCTTGC+AGG | + | chr3_1:60530748-60530767 | Msa0366080:intron | 40.0% | |
| ATGGTGAAACATGCTGATGA+TGG | + | chr3_1:60530775-60530794 | Msa0366080:CDS | 40.0% | |
| !! | AACTTACCCTTTGGTGTTCA+AGG | + | chr3_1:60530948-60530967 | Msa0366080:CDS | 40.0% |
| TTGTCACCTTGAACACCAAA+GGG | - | chr3_1:60530957-60530976 | None:intergenic | 40.0% | |
| TTTGTCACCTTGAACACCAA+AGG | - | chr3_1:60530958-60530977 | None:intergenic | 40.0% | |
| GTGACAAAATTTCTCTGTGG+TGG | + | chr3_1:60530970-60530989 | Msa0366080:CDS | 40.0% | |
| TGGTGGTTTCACAATTGGAA+TGG | + | chr3_1:60530987-60531006 | Msa0366080:CDS | 40.0% | |
| GGTGGTTTCACAATTGGAAT+GGG | + | chr3_1:60530988-60531007 | Msa0366080:CDS | 40.0% | |
| AGCGATTATCGAACTTGCAA+AGG | + | chr3_1:60531059-60531078 | Msa0366080:CDS | 40.0% | |
| GCGATTATCGAACTTGCAAA+GGG | + | chr3_1:60531060-60531079 | Msa0366080:CDS | 40.0% | |
| TGGGAAAGAGAGAGACTTAT+TGG | + | chr3_1:60531111-60531130 | Msa0366080:CDS | 40.0% | |
| ! | TTCATAGGGCATTCTGGAAA+TGG | - | chr3_1:60531153-60531172 | None:intergenic | 40.0% |
| ! | CAACGGATTCCTTGTTCATA+GGG | - | chr3_1:60531167-60531186 | None:intergenic | 40.0% |
| CAGGTAAGGTGAAAATGCAA+CGG | - | chr3_1:60531184-60531203 | None:intergenic | 40.0% | |
| GTGTTGTCTTGATTCAGGTA+AGG | - | chr3_1:60531198-60531217 | None:intergenic | 40.0% | |
| CTGTAGTGTTGTCTTGATTC+AGG | - | chr3_1:60531203-60531222 | None:intergenic | 40.0% | |
| TGGAGGGTGAAATGATAACA+AGG | + | chr3_1:60531247-60531266 | Msa0366080:CDS | 40.0% | |
| TGGTATTAGACGCAACTTGA+AGG | + | chr3_1:60531407-60531426 | Msa0366080:CDS | 40.0% | |
| GTTGGAGACGAATTATAACG+AGG | + | chr3_1:60531599-60531618 | Msa0366080:CDS | 40.0% | |
| GAATCAAGGATGCTAAGTAC+TGG | + | chr3_1:60531621-60531640 | Msa0366080:CDS | 40.0% | |
| ATGGATGCAAACAAGTTGCA+TGG | - | chr3_1:60531741-60531760 | None:intergenic | 40.0% | |
| ! | ATGCAACTTGTTTGCATCCA+TGG | + | chr3_1:60531740-60531759 | Msa0366080:CDS | 40.0% |
| GATGATCCATCAATGAAAGG+AGG | + | chr3_1:60531801-60531820 | Msa0366080:CDS | 40.0% | |
| TGATCCATCAATGAAAGGAG+GGG | + | chr3_1:60531803-60531822 | Msa0366080:CDS | 40.0% | |
| TTAACCCCTCCTTTCATTGA+TGG | - | chr3_1:60531810-60531829 | None:intergenic | 40.0% | |
| GGTTTATGAGAAATGTGGCA+AGG | - | chr3_1:60529822-60529841 | None:intergenic | 40.0% | |
| TATCCTCTTGCAGGTATACT+AGG | + | chr3_1:60530085-60530104 | Msa0366080:intron | 40.0% | |
| AAACCTAGTATACCTGCAAG+AGG | - | chr3_1:60530091-60530110 | None:intergenic | 40.0% | |
| TCGGTCCTCAAAAATGCTAA+AGG | + | chr3_1:60530464-60530483 | Msa0366080:intron | 40.0% | |
| AACATATCTCTACGTCTTGC+AGG | + | chr3_1:60530748-60530767 | Msa0366080:intron | 40.0% | |
| ATGGTGAAACATGCTGATGA+TGG | + | chr3_1:60530775-60530794 | Msa0366080:CDS | 40.0% | |
| !! | AACTTACCCTTTGGTGTTCA+AGG | + | chr3_1:60530948-60530967 | Msa0366080:CDS | 40.0% |
| TTGTCACCTTGAACACCAAA+GGG | - | chr3_1:60530957-60530976 | None:intergenic | 40.0% | |
| TTTGTCACCTTGAACACCAA+AGG | - | chr3_1:60530958-60530977 | None:intergenic | 40.0% | |
| GTGACAAAATTTCTCTGTGG+TGG | + | chr3_1:60530970-60530989 | Msa0366080:CDS | 40.0% | |
| TGGTGGTTTCACAATTGGAA+TGG | + | chr3_1:60530987-60531006 | Msa0366080:CDS | 40.0% | |
| GGTGGTTTCACAATTGGAAT+GGG | + | chr3_1:60530988-60531007 | Msa0366080:CDS | 40.0% | |
| AGCGATTATCGAACTTGCAA+AGG | + | chr3_1:60531059-60531078 | Msa0366080:CDS | 40.0% | |
| GCGATTATCGAACTTGCAAA+GGG | + | chr3_1:60531060-60531079 | Msa0366080:CDS | 40.0% | |
| TGGGAAAGAGAGAGACTTAT+TGG | + | chr3_1:60531111-60531130 | Msa0366080:CDS | 40.0% | |
| ! | TTCATAGGGCATTCTGGAAA+TGG | - | chr3_1:60531153-60531172 | None:intergenic | 40.0% |
| ! | CAACGGATTCCTTGTTCATA+GGG | - | chr3_1:60531167-60531186 | None:intergenic | 40.0% |
| CAGGTAAGGTGAAAATGCAA+CGG | - | chr3_1:60531184-60531203 | None:intergenic | 40.0% | |
| GTGTTGTCTTGATTCAGGTA+AGG | - | chr3_1:60531198-60531217 | None:intergenic | 40.0% | |
| CTGTAGTGTTGTCTTGATTC+AGG | - | chr3_1:60531203-60531222 | None:intergenic | 40.0% | |
| TGGAGGGTGAAATGATAACA+AGG | + | chr3_1:60531247-60531266 | Msa0366080:CDS | 40.0% | |
| TGGTATTAGACGCAACTTGA+AGG | + | chr3_1:60531407-60531426 | Msa0366080:CDS | 40.0% | |
| GTTGGAGACGAATTATAACG+AGG | + | chr3_1:60531599-60531618 | Msa0366080:CDS | 40.0% | |
| GAATCAAGGATGCTAAGTAC+TGG | + | chr3_1:60531621-60531640 | Msa0366080:CDS | 40.0% | |
| ATGGATGCAAACAAGTTGCA+TGG | - | chr3_1:60531741-60531760 | None:intergenic | 40.0% | |
| ! | ATGCAACTTGTTTGCATCCA+TGG | + | chr3_1:60531740-60531759 | Msa0366080:CDS | 40.0% |
| GATGATCCATCAATGAAAGG+AGG | + | chr3_1:60531801-60531820 | Msa0366080:CDS | 40.0% | |
| TGATCCATCAATGAAAGGAG+GGG | + | chr3_1:60531803-60531822 | Msa0366080:CDS | 40.0% | |
| TTAACCCCTCCTTTCATTGA+TGG | - | chr3_1:60531810-60531829 | None:intergenic | 40.0% | |
| GGTAGCTGTTTGATAAGCCA+TGG | - | chr3_1:60529849-60529868 | None:intergenic | 45.0% | |
| TCTACGTCTTGCAGGTAGAA+TGG | + | chr3_1:60530756-60530775 | Msa0366080:intron | 45.0% | |
| CTCTGTGGTGGTTTCACAAT+TGG | + | chr3_1:60530982-60531001 | Msa0366080:CDS | 45.0% | |
| TCCAGAATGCCCTATGAACA+AGG | + | chr3_1:60531155-60531174 | Msa0366080:CDS | 45.0% | |
| ! | TCCTTGTTCATAGGGCATTC+TGG | - | chr3_1:60531159-60531178 | None:intergenic | 45.0% |
| ! | GCAACGGATTCCTTGTTCAT+AGG | - | chr3_1:60531168-60531187 | None:intergenic | 45.0% |
| ACAACTTTCGAAGCGATTGC+AGG | + | chr3_1:60531312-60531331 | Msa0366080:CDS | 45.0% | |
| AAGCGATTGCAGGTTATGTG+TGG | + | chr3_1:60531322-60531341 | Msa0366080:CDS | 45.0% | |
| GCGTCTAATACCAGCTACAA+TGG | - | chr3_1:60531400-60531419 | None:intergenic | 45.0% | |
| !! | GCTAAGTACTGGTGCAGTAA+CGG | + | chr3_1:60531632-60531651 | Msa0366080:CDS | 45.0% |
| !! | CAGTAACGGTTTTGACAGAG+TGG | + | chr3_1:60531646-60531665 | Msa0366080:CDS | 45.0% |
| AAGGCAACTTCAACTGAACG+TGG | - | chr3_1:60531920-60531939 | None:intergenic | 45.0% | |
| GGTAGCTGTTTGATAAGCCA+TGG | - | chr3_1:60529849-60529868 | None:intergenic | 45.0% | |
| TCTACGTCTTGCAGGTAGAA+TGG | + | chr3_1:60530756-60530775 | Msa0366080:intron | 45.0% | |
| CTCTGTGGTGGTTTCACAAT+TGG | + | chr3_1:60530982-60531001 | Msa0366080:CDS | 45.0% | |
| TCCAGAATGCCCTATGAACA+AGG | + | chr3_1:60531155-60531174 | Msa0366080:CDS | 45.0% | |
| ! | TCCTTGTTCATAGGGCATTC+TGG | - | chr3_1:60531159-60531178 | None:intergenic | 45.0% |
| ! | GCAACGGATTCCTTGTTCAT+AGG | - | chr3_1:60531168-60531187 | None:intergenic | 45.0% |
| ACAACTTTCGAAGCGATTGC+AGG | + | chr3_1:60531312-60531331 | Msa0366080:CDS | 45.0% | |
| AAGCGATTGCAGGTTATGTG+TGG | + | chr3_1:60531322-60531341 | Msa0366080:CDS | 45.0% | |
| GCGTCTAATACCAGCTACAA+TGG | - | chr3_1:60531400-60531419 | None:intergenic | 45.0% | |
| !! | GCTAAGTACTGGTGCAGTAA+CGG | + | chr3_1:60531632-60531651 | Msa0366080:CDS | 45.0% |
| !! | CAGTAACGGTTTTGACAGAG+TGG | + | chr3_1:60531646-60531665 | Msa0366080:CDS | 45.0% |
| AAGGCAACTTCAACTGAACG+TGG | - | chr3_1:60531920-60531939 | None:intergenic | 45.0% | |
| GTGTTGCACGCTATCTGTGA+CGG | + | chr3_1:60531012-60531031 | Msa0366080:CDS | 50.0% | |
| ! | TCCCACACAGGTATCGTTGA+GGG | - | chr3_1:60531096-60531115 | None:intergenic | 50.0% |
| ! | TTCCCACACAGGTATCGTTG+AGG | - | chr3_1:60531097-60531116 | None:intergenic | 50.0% |
| AGTCTCTCTCTTTCCCACAC+AGG | - | chr3_1:60531108-60531127 | None:intergenic | 50.0% | |
| CGATTGCAGGTTATGTGTGG+AGG | + | chr3_1:60531325-60531344 | Msa0366080:CDS | 50.0% | |
| !! | ACAGTGCTGACCATTGTAGC+TGG | + | chr3_1:60531387-60531406 | Msa0366080:CDS | 50.0% |
| GCAAACAAGTTGCATGGTGC+TGG | - | chr3_1:60531735-60531754 | None:intergenic | 50.0% | |
| TTCCTCCTTGAACTTGGGCA+TGG | - | chr3_1:60531859-60531878 | None:intergenic | 50.0% | |
| GTGTTGCACGCTATCTGTGA+CGG | + | chr3_1:60531012-60531031 | Msa0366080:CDS | 50.0% | |
| ! | TCCCACACAGGTATCGTTGA+GGG | - | chr3_1:60531096-60531115 | None:intergenic | 50.0% |
| ! | TTCCCACACAGGTATCGTTG+AGG | - | chr3_1:60531097-60531116 | None:intergenic | 50.0% |
| AGTCTCTCTCTTTCCCACAC+AGG | - | chr3_1:60531108-60531127 | None:intergenic | 50.0% | |
| CGATTGCAGGTTATGTGTGG+AGG | + | chr3_1:60531325-60531344 | Msa0366080:CDS | 50.0% | |
| !! | ACAGTGCTGACCATTGTAGC+TGG | + | chr3_1:60531387-60531406 | Msa0366080:CDS | 50.0% |
| GCAAACAAGTTGCATGGTGC+TGG | - | chr3_1:60531735-60531754 | None:intergenic | 50.0% | |
| TTCCTCCTTGAACTTGGGCA+TGG | - | chr3_1:60531859-60531878 | None:intergenic | 50.0% | |
| ! | CACGCTATCTGTGACGGAGT+TGG | + | chr3_1:60531018-60531037 | Msa0366080:CDS | 55.0% |
| AGCCCTCAACGATACCTGTG+TGG | + | chr3_1:60531091-60531110 | Msa0366080:CDS | 55.0% | |
| GCCCTCAACGATACCTGTGT+GGG | + | chr3_1:60531092-60531111 | Msa0366080:CDS | 55.0% | |
| ACTTGGGCATGGCAGCAACA+GGG | - | chr3_1:60531848-60531867 | None:intergenic | 55.0% | |
| AACTTGGGCATGGCAGCAAC+AGG | - | chr3_1:60531849-60531868 | None:intergenic | 55.0% | |
| TGCTGCCATGCCCAAGTTCA+AGG | + | chr3_1:60531851-60531870 | Msa0366080:CDS | 55.0% | |
| TGCCATGCCCAAGTTCAAGG+AGG | + | chr3_1:60531854-60531873 | Msa0366080:CDS | 55.0% | |
| ! | CACGCTATCTGTGACGGAGT+TGG | + | chr3_1:60531018-60531037 | Msa0366080:CDS | 55.0% |
| AGCCCTCAACGATACCTGTG+TGG | + | chr3_1:60531091-60531110 | Msa0366080:CDS | 55.0% | |
| GCCCTCAACGATACCTGTGT+GGG | + | chr3_1:60531092-60531111 | Msa0366080:CDS | 55.0% | |
| ACTTGGGCATGGCAGCAACA+GGG | - | chr3_1:60531848-60531867 | None:intergenic | 55.0% | |
| AACTTGGGCATGGCAGCAAC+AGG | - | chr3_1:60531849-60531868 | None:intergenic | 55.0% | |
| TGCTGCCATGCCCAAGTTCA+AGG | + | chr3_1:60531851-60531870 | Msa0366080:CDS | 55.0% | |
| TGCCATGCCCAAGTTCAAGG+AGG | + | chr3_1:60531854-60531873 | Msa0366080:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 60529780 | 60532182 | 60529780 | ID=Msa0366080;Name=Msa0366080 |
| chr3_1 | mRNA | 60529780 | 60532182 | 60529780 | ID=Msa0366080-mRNA-1;Parent=Msa0366080;Name=Msa0366080-mRNA-1;_AED=0.22;_eAED=0.22;_QI=68|1|1|1|1|1|2|277|461 |
| chr3_1 | exon | 60529780 | 60530097 | 60529780 | ID=Msa0366080-mRNA-1:exon:11686;Parent=Msa0366080-mRNA-1 |
| chr3_1 | exon | 60530770 | 60532182 | 60530770 | ID=Msa0366080-mRNA-1:exon:11687;Parent=Msa0366080-mRNA-1 |
| chr3_1 | five_prime_UTR | 60529780 | 60529847 | 60529780 | ID=Msa0366080-mRNA-1:five_prime_utr;Parent=Msa0366080-mRNA-1 |
| chr3_1 | CDS | 60529848 | 60530097 | 60529848 | ID=Msa0366080-mRNA-1:cds;Parent=Msa0366080-mRNA-1 |
| chr3_1 | CDS | 60530770 | 60531905 | 60530770 | ID=Msa0366080-mRNA-1:cds;Parent=Msa0366080-mRNA-1 |
| chr3_1 | three_prime_UTR | 60531906 | 60532182 | 60531906 | ID=Msa0366080-mRNA-1:three_prime_utr;Parent=Msa0366080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
