Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366460 | XP_013460445.1 | 86.901 | 626 | 66 | 8 | 1 | 622 | 1 | 614 | 0.0 | 1016 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366460 | A0A072UZD4 | 86.901 | 626 | 66 | 8 | 1 | 622 | 1 | 614 | 0.0 | 1016 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0366460 | Msa0575010 | 0.816552 | 5.214217e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366460 | MtrunA17_Chr3g0107471 | 86.901 | 626 | 66 | 8 | 1 | 622 | 1 | 614 | 0.0 | 1016 |
| Msa0366460 | MtrunA17_Chr3g0144601 | 34.197 | 193 | 112 | 7 | 8 | 187 | 6 | 196 | 1.86e-13 | 72.8 |
| Msa0366460 | MtrunA17_Chr3g0145531 | 32.692 | 208 | 125 | 7 | 8 | 202 | 6 | 211 | 2.18e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0366460 | AT1G15720.1 | 29.630 | 189 | 124 | 5 | 3 | 184 | 2 | 188 | 1.14e-13 | 73.6 |
| Msa0366460 | AT5G58340.2 | 29.167 | 192 | 127 | 4 | 3 | 187 | 2 | 191 | 2.59e-12 | 69.7 |
| Msa0366460 | AT5G58340.1 | 29.167 | 192 | 127 | 4 | 3 | 187 | 2 | 191 | 2.59e-12 | 69.7 |
Find 198 sgRNAs with CRISPR-Local
Find 459 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCAAAGAACTTGATTTA+AGG | 0.142750 | 3_1:-61346933 | None:intergenic |
| TATTTGAACCGATCTTATTT+TGG | 0.197560 | 3_1:+61350340 | Msa0366460:three_prime_UTR |
| AGAAGGCTCCTTGGCAAAAT+TGG | 0.219221 | 3_1:-61347133 | None:intergenic |
| TGTTTCATGATGGAAGATTT+TGG | 0.227045 | 3_1:-61344405 | None:intergenic |
| GTCCCTTAAATCAAGTTCTT+TGG | 0.242870 | 3_1:+61346930 | Msa0366460:CDS |
| GAAGCGAGAGTTCGCACTTC+TGG | 0.270101 | 3_1:+61345948 | Msa0366460:CDS |
| AGAAGGTTGTTAGAAGGTTT+GGG | 0.274634 | 3_1:+61345064 | Msa0366460:CDS |
| GCGAGCTGATACTTCTAGTA+TGG | 0.280509 | 3_1:+61345369 | Msa0366460:CDS |
| AAGGTGCGCTTTGGGATGTT+AGG | 0.293183 | 3_1:+61344858 | Msa0366460:CDS |
| CTCCAAAGAACTTGATTTAA+GGG | 0.304386 | 3_1:-61346932 | None:intergenic |
| GAATGGTTTGTGTCCGGGTC+CGG | 0.309232 | 3_1:+61345009 | Msa0366460:CDS |
| TTGGAGGGGAAGGGAGAGGC+GGG | 0.313647 | 3_1:+61344787 | Msa0366460:CDS |
| TAGAAGGTTGTTAGAAGGTT+TGG | 0.315126 | 3_1:+61345063 | Msa0366460:CDS |
| AATGGGAGAGTAGAAGGTTT+AGG | 0.318960 | 3_1:+61345184 | Msa0366460:CDS |
| GGAGGGGAAGGGAGAGGCGG+GGG | 0.324847 | 3_1:+61344789 | Msa0366460:CDS |
| AAACATTACAAACTGGATAA+TGG | 0.328442 | 3_1:+61344442 | Msa0366460:CDS |
| TTGGCATCATTAGGCTGATA+TGG | 0.344084 | 3_1:-61347114 | None:intergenic |
| TTTCGGCGGTGAAGAGGATT+TGG | 0.346079 | 3_1:+61344768 | Msa0366460:CDS |
| GGGCGTAATGGGAGAGTAGA+AGG | 0.350234 | 3_1:+61345178 | Msa0366460:CDS |
| TACTTCTGTTGATGCGAATC+AGG | 0.354114 | 3_1:+61345336 | Msa0366460:CDS |
| ATGGGAGAGTAGAAGGTTTA+GGG | 0.354705 | 3_1:+61345185 | Msa0366460:CDS |
| TGATGGGACGTTAGAAGGTC+TGG | 0.359590 | 3_1:+61345818 | Msa0366460:CDS |
| TTTGGAGGGGAAGGGAGAGG+CGG | 0.360995 | 3_1:+61344786 | Msa0366460:CDS |
| TTTCTATCTCGAATGCGTTT+CGG | 0.362612 | 3_1:+61344666 | Msa0366460:CDS |
| GGGAGTAGAAGGTTGTTAGA+AGG | 0.363398 | 3_1:+61345058 | Msa0366460:CDS |
| AGGAGATTGAAGGTGCGCTT+TGG | 0.371928 | 3_1:+61344849 | Msa0366460:CDS |
| GGATTTGGAGGGGAAGGGAG+AGG | 0.371997 | 3_1:+61344783 | Msa0366460:CDS |
| TGGAGGGGAAGGGAGAGGCG+GGG | 0.374471 | 3_1:+61344788 | Msa0366460:CDS |
| GGAGATTGAAGGTGCGCTTT+GGG | 0.375048 | 3_1:+61344850 | Msa0366460:CDS |
| TGTAGCCAATTTGGATCTTA+CGG | 0.379477 | 3_1:-61347007 | None:intergenic |
| TGAAGCCGTAAGATCCAAAT+TGG | 0.381380 | 3_1:+61347002 | Msa0366460:CDS |
| CTGTTTCTCCAATAGAAATT+CGG | 0.385343 | 3_1:+61346758 | Msa0366460:intron |
| CGGAGAGTGGAAGTAGGGTT+AGG | 0.385447 | 3_1:-61344514 | None:intergenic |
| AATGGTTTGTGTCCGGGTCC+GGG | 0.390073 | 3_1:+61345010 | Msa0366460:CDS |
| GCTCGGGTGGTGGAATGTCG+AGG | 0.390367 | 3_1:+61345155 | Msa0366460:CDS |
| GTCAGCCAAGAAGGAAGAAA+AGG | 0.392804 | 3_1:+61347801 | Msa0366460:CDS |
| CGAGATGTTCGAGGATTTGA+AGG | 0.396994 | 3_1:-61344619 | None:intergenic |
| GAAGGGGAATGGTTTGTGTC+CGG | 0.401967 | 3_1:+61345003 | Msa0366460:CDS |
| AAATCATGGCAATGAAGAAT+TGG | 0.405691 | 3_1:+61345300 | Msa0366460:CDS |
| CTTGCCCGTCGCATTAAGTT+GGG | 0.406020 | 3_1:-61347225 | None:intergenic |
| GGGAGTGGGCTGGTGTCGGA+TGG | 0.408546 | 3_1:+61344809 | Msa0366460:CDS |
| GTCGGATGGGTTTGTACAGT+GGG | 0.414067 | 3_1:+61344823 | Msa0366460:CDS |
| AAGCGTGATGGGACGTTAGA+AGG | 0.416606 | 3_1:+61345813 | Msa0366460:CDS |
| TTGGCAAAATTGGCATCATT+AGG | 0.418185 | 3_1:-61347123 | None:intergenic |
| CGACTACCATTACTACAGTT+AGG | 0.429040 | 3_1:-61347177 | None:intergenic |
| CGACGATCATTACTATAGTT+GGG | 0.429090 | 3_1:-61347201 | None:intergenic |
| TGAACGAAAACATTACAAAC+TGG | 0.429144 | 3_1:+61344435 | Msa0366460:CDS |
| TGTTAGGGTTGCGGAGAGGT+TGG | 0.429379 | 3_1:+61344874 | Msa0366460:CDS |
| GGTTGGTGGGGTTGAATACA+AGG | 0.431929 | 3_1:+61344891 | Msa0366460:CDS |
| GCGACGATCATTACTATAGT+TGG | 0.433098 | 3_1:-61347202 | None:intergenic |
| TTGATTAGCAATACCCTAGA+TGG | 0.434111 | 3_1:-61350281 | None:intergenic |
| ATGCTGCTGAGGGGAGTAGA+AGG | 0.436345 | 3_1:+61345047 | Msa0366460:CDS |
| GCGAATATGGGCAACTTGAA+AGG | 0.437533 | 3_1:+61350127 | Msa0366460:CDS |
| GATCGGGGACGGTGGTGTTA+CGG | 0.440313 | 3_1:-61344475 | None:intergenic |
| ATATACACAAGATTACTAAC+AGG | 0.445233 | 3_1:-61350457 | None:intergenic |
| GGTGATGATGAGAATGATAA+TGG | 0.448476 | 3_1:+61345864 | Msa0366460:CDS |
| TTGAATTAGGGGATCGGGGA+CGG | 0.450563 | 3_1:-61344486 | None:intergenic |
| TCAGATGTGTGCAATGCATC+AGG | 0.450692 | 3_1:-61346982 | None:intergenic |
| GAAGAGAATGGCTCGGGTGG+TGG | 0.450981 | 3_1:+61345145 | Msa0366460:CDS |
| TAGGGTTGCGGAGAGGTTGG+TGG | 0.451418 | 3_1:+61344877 | Msa0366460:CDS |
| CGAATATGGGCAACTTGAAA+GGG | 0.456078 | 3_1:+61350128 | Msa0366460:CDS |
| AGGGTTGCGGAGAGGTTGGT+GGG | 0.456683 | 3_1:+61344878 | Msa0366460:CDS |
| TCGGGTGGTGGAATGTCGAG+GGG | 0.456994 | 3_1:+61345157 | Msa0366460:CDS |
| AAATCGTGGCAATGAACAAT+TGG | 0.458465 | 3_1:+61345926 | Msa0366460:CDS |
| GAAAAGGAAATGGACTTCCT+TGG | 0.461062 | 3_1:+61347817 | Msa0366460:CDS |
| TTTGAAGAACGCGGAGGAGG+AGG | 0.461533 | 3_1:-61344562 | None:intergenic |
| ACTTCTGGAATGAGAGATAA+AGG | 0.461699 | 3_1:+61345963 | Msa0366460:CDS |
| TTCTTTGGAGCTAAAAGCAT+TGG | 0.464026 | 3_1:+61346945 | Msa0366460:CDS |
| AAGGGGAATGGTTTGTGTCC+GGG | 0.465239 | 3_1:+61345004 | Msa0366460:CDS |
| AAATCATGGTAATCAGCAAT+TGG | 0.467432 | 3_1:+61345123 | Msa0366460:CDS |
| TGAAGAGGATTTGGAGGGGA+AGG | 0.471322 | 3_1:+61344777 | Msa0366460:CDS |
| TGCTGATGTGAAGAAACTTC+GGG | 0.472208 | 3_1:+61346906 | Msa0366460:CDS |
| ACTTGCCCGTCGCATTAAGT+TGG | 0.473338 | 3_1:-61347226 | None:intergenic |
| CACAGGGGAGTTAAACTCTC+TGG | 0.478478 | 3_1:+61346829 | Msa0366460:CDS |
| GAGTTGGGCGATTGGAACCT+AGG | 0.481758 | 3_1:+61350396 | Msa0366460:three_prime_UTR |
| CTCGGGTGGTGGAATGTCGA+GGG | 0.488513 | 3_1:+61345156 | Msa0366460:CDS |
| GAAGAGGATTTGGAGGGGAA+GGG | 0.491160 | 3_1:+61344778 | Msa0366460:CDS |
| CGCAACAAAGTCAGCCAAGA+AGG | 0.491405 | 3_1:+61347792 | Msa0366460:CDS |
| TACAATTCAGATCTCAAAGT+TGG | 0.491521 | 3_1:-61350163 | None:intergenic |
| AGATTGAAGCGGTGAGGACG+TGG | 0.494020 | 3_1:-61344586 | None:intergenic |
| CTGTCTCTTCTAACATGAGT+TGG | 0.496070 | 3_1:+61350380 | Msa0366460:three_prime_UTR |
| TACTCACCAGACGGATCCTC+CGG | 0.496317 | 3_1:-61344743 | None:intergenic |
| TGCTGTTGCGGTTGAATGTA+CGG | 0.501252 | 3_1:+61344700 | Msa0366460:CDS |
| GGAGTGGGCTGGTGTCGGAT+GGG | 0.504791 | 3_1:+61344810 | Msa0366460:CDS |
| CGTGAATCGGCGCCGGAGAG+TGG | 0.505542 | 3_1:-61344527 | None:intergenic |
| TGTCTCTTCTAACATGAGTT+GGG | 0.508914 | 3_1:+61350381 | Msa0366460:three_prime_UTR |
| GGAGAGTGGAAGTAGGGTTA+GGG | 0.509768 | 3_1:-61344513 | None:intergenic |
| CAAGAAGGAAGAAAAGGAAA+TGG | 0.510534 | 3_1:+61347807 | Msa0366460:CDS |
| GCTTTGGGATGTTAGGGTTG+CGG | 0.510764 | 3_1:+61344865 | Msa0366460:CDS |
| GGACGGTGGTGTTACGGAGG+AGG | 0.512238 | 3_1:-61344469 | None:intergenic |
| TCTAACATGAGTTGGGCGAT+TGG | 0.512707 | 3_1:+61350388 | Msa0366460:three_prime_UTR |
| GCGATGGTTTCGAAGGGGAA+TGG | 0.517229 | 3_1:+61344992 | Msa0366460:CDS |
| GAAGTATTTGATTAATTCGC+CGG | 0.517468 | 3_1:+61344724 | Msa0366460:CDS |
| CGGGGACGGTGGTGTTACGG+AGG | 0.517597 | 3_1:-61344472 | None:intergenic |
| AAGATTTGAGGAAGCGTGAT+GGG | 0.519144 | 3_1:+61345802 | Msa0366460:CDS |
| GACTACCATTACTACAGTTA+GGG | 0.519280 | 3_1:-61347176 | None:intergenic |
| CGGCGGTGAAGAGGATTTGG+AGG | 0.520447 | 3_1:+61344771 | Msa0366460:CDS |
| TCATGTTAGAAGAGACAGTC+AGG | 0.520738 | 3_1:-61350375 | None:intergenic |
| ACAAGGAACAGAAGGCTCCT+TGG | 0.522057 | 3_1:-61347142 | None:intergenic |
| GTTTCTTGATTTGATTGCGA+TGG | 0.522727 | 3_1:+61344976 | Msa0366460:CDS |
| ACCTCACTATCTGCACTAGT+TGG | 0.523020 | 3_1:-61349445 | None:intergenic |
| GTGCTGATGTGAAGAAACTT+CGG | 0.526628 | 3_1:+61346905 | Msa0366460:CDS |
| CCTTGGAAGAAGAGACACTA+AGG | 0.527054 | 3_1:+61347834 | Msa0366460:CDS |
| ATGCGGTTGTTGAAGTGAAG+AGG | 0.528049 | 3_1:+61344918 | Msa0366460:CDS |
| GTGTGCAATGCATCAGGAAG+AGG | 0.534240 | 3_1:-61346976 | None:intergenic |
| TCACAAACACCTCCCGGACC+CGG | 0.535104 | 3_1:-61345022 | None:intergenic |
| AGGTGCGCTTTGGGATGTTA+GGG | 0.535657 | 3_1:+61344859 | Msa0366460:CDS |
| AATTCGCCGGAGGATCCGTC+TGG | 0.535840 | 3_1:+61344737 | Msa0366460:CDS |
| GGGTTTGAAGAACGCGGAGG+AGG | 0.536346 | 3_1:-61344565 | None:intergenic |
| TTTGAGACGTGAATCGGCGC+CGG | 0.540038 | 3_1:-61344534 | None:intergenic |
| TCGGATGGGTTTGTACAGTG+GGG | 0.541767 | 3_1:+61344824 | Msa0366460:CDS |
| CCTTAGTGTCTCTTCTTCCA+AGG | 0.542109 | 3_1:-61347834 | None:intergenic |
| CGGGTGGTGGAATGTCGAGG+GGG | 0.542853 | 3_1:+61345158 | Msa0366460:CDS |
| TTGAAGAACGCGGAGGAGGA+GGG | 0.543449 | 3_1:-61344561 | None:intergenic |
| TGTTGATGCGAATCAGGAAG+TGG | 0.544009 | 3_1:+61345342 | Msa0366460:CDS |
| AATGAGTATTTGGCAGCCCT+AGG | 0.545162 | 3_1:-61350413 | None:intergenic |
| GATGGGACGTTAGAAGGTCT+GGG | 0.545336 | 3_1:+61345819 | Msa0366460:CDS |
| AAATCTCTTCGAGATGTTCG+AGG | 0.546181 | 3_1:-61344628 | None:intergenic |
| CTTCTTGGCTGACTTTGTTG+CGG | 0.549683 | 3_1:-61347791 | None:intergenic |
| TCGCCCCAACTTAATGCGAC+GGG | 0.550818 | 3_1:+61347221 | Msa0366460:CDS |
| CGGCGCCGGAGAGTGGAAGT+AGG | 0.551999 | 3_1:-61344520 | None:intergenic |
| GAGGATTTGAAGGGAGACTT+CGG | 0.552616 | 3_1:-61344609 | None:intergenic |
| GTTGAATACAAGGAGGGATG+CGG | 0.557533 | 3_1:+61344901 | Msa0366460:CDS |
| GAAGGTTGTTAGAAGGTTTG+GGG | 0.557542 | 3_1:+61345065 | Msa0366460:CDS |
| TTGATTGCGATGGTTTCGAA+GGG | 0.559576 | 3_1:+61344986 | Msa0366460:CDS |
| TTTGATTGCGATGGTTTCGA+AGG | 0.560926 | 3_1:+61344985 | Msa0366460:CDS |
| GGATGGGTTTGTACAGTGGG+GGG | 0.561482 | 3_1:+61344826 | Msa0366460:CDS |
| AATCAGCAATTGGAAGAGAA+TGG | 0.564895 | 3_1:+61345133 | Msa0366460:CDS |
| AATGATAATGGCAATGTTGA+CGG | 0.566005 | 3_1:+61345876 | Msa0366460:CDS |
| GAAGATTTGAGGAAGCGTGA+TGG | 0.566286 | 3_1:+61345801 | Msa0366460:CDS |
| GATCGCCCTAACTGTAGTAA+TGG | 0.569075 | 3_1:+61347171 | Msa0366460:CDS |
| TTGATAGCAGGTTTGAGCTG+TGG | 0.574414 | 3_1:+61349398 | Msa0366460:intron |
| CGAGCTGATACTTCTAGTAT+GGG | 0.580175 | 3_1:+61345370 | Msa0366460:CDS |
| CAATTGGAAGAGAATGGCTC+GGG | 0.580408 | 3_1:+61345139 | Msa0366460:CDS |
| AAGGAGAAAATGAATGATGA+TGG | 0.580983 | 3_1:+61345843 | Msa0366460:CDS |
| ACAACGATGGGTGAAAATCA+TGG | 0.581871 | 3_1:+61345286 | Msa0366460:CDS |
| AAAGAGAAAATGAATGATGA+TGG | 0.582298 | 3_1:+61345208 | Msa0366460:CDS |
| GAAGAAGAGACACTAAGGGC+TGG | 0.584293 | 3_1:+61347839 | Msa0366460:CDS |
| GCAATTGGAAGAGAATGGCT+CGG | 0.584680 | 3_1:+61345138 | Msa0366460:CDS |
| GGCGCCGGAGAGTGGAAGTA+GGG | 0.585546 | 3_1:-61344519 | None:intergenic |
| CTGCGTTGCCAAAATAAGAT+CGG | 0.587491 | 3_1:-61350348 | None:intergenic |
| GTCGCCCCAACTTAATGCGA+CGG | 0.587509 | 3_1:+61347220 | Msa0366460:CDS |
| GGCGGTGAAGAGGATTTGGA+GGG | 0.588504 | 3_1:+61344772 | Msa0366460:CDS |
| TTGGAAGAGAATGGCTCGGG+TGG | 0.589660 | 3_1:+61345142 | Msa0366460:CDS |
| GAGTGCTTACTGTGCTGTTG+CGG | 0.590232 | 3_1:+61344688 | Msa0366460:CDS |
| TGTCGGATGGGTTTGTACAG+TGG | 0.590442 | 3_1:+61344822 | Msa0366460:CDS |
| CGGATGGGTTTGTACAGTGG+GGG | 0.592731 | 3_1:+61344825 | Msa0366460:CDS |
| ATTCAGATCTCAAAGTTGGT+AGG | 0.599024 | 3_1:-61350159 | None:intergenic |
| GAAGAATTGGAAGACAGAGT+TGG | 0.600001 | 3_1:+61345313 | Msa0366460:CDS |
| AGTTGGGCGATTGGAACCTA+GGG | 0.600088 | 3_1:+61350397 | Msa0366460:three_prime_UTR |
| GAAGAGATTTACCGCGACGA+CGG | 0.608542 | 3_1:+61344641 | Msa0366460:CDS |
| GTAGCAATGGGTGAAAATCA+TGG | 0.609494 | 3_1:+61345109 | Msa0366460:CDS |
| TCCAACTAGTGCAGATAGTG+AGG | 0.611167 | 3_1:+61349444 | Msa0366460:CDS |
| AGTTAAACTCTCTGGTGATG+AGG | 0.611191 | 3_1:+61346837 | Msa0366460:CDS |
| GGGTTGCGGAGAGGTTGGTG+GGG | 0.611883 | 3_1:+61344879 | Msa0366460:CDS |
| GTGAATGATGATGTAGCAAT+GGG | 0.612467 | 3_1:+61345097 | Msa0366460:CDS |
| AATTAGGGGATCGGGGACGG+TGG | 0.614324 | 3_1:-61344483 | None:intergenic |
| AGTGAATGATGATGTAGCAA+TGG | 0.615046 | 3_1:+61345096 | Msa0366460:CDS |
| CTAACCCTACTTCCACTCTC+CGG | 0.617416 | 3_1:+61344515 | Msa0366460:CDS |
| TGTTTGTGAAAATGCTGCTG+AGG | 0.619713 | 3_1:+61345036 | Msa0366460:CDS |
| ATAGAAATTCGGAAAGACAA+TGG | 0.620587 | 3_1:+61346769 | Msa0366460:intron |
| TTGCCCGTCGCATTAAGTTG+GGG | 0.621336 | 3_1:-61347224 | None:intergenic |
| TCACTACTACAAGGAACAGA+AGG | 0.621390 | 3_1:-61347150 | None:intergenic |
| GAGATGTTCGAGGATTTGAA+GGG | 0.622886 | 3_1:-61344618 | None:intergenic |
| GATGATGGTGATGATGAGAA+TGG | 0.623693 | 3_1:+61345223 | Msa0366460:CDS |
| GACGTTAGAAGGTCTGGGAA+AGG | 0.623697 | 3_1:+61345824 | Msa0366460:CDS |
| CTACAAAAGATATAAATCGC+AGG | 0.623762 | 3_1:+61347025 | Msa0366460:CDS |
| GACGATCATTACTATAGTTG+GGG | 0.624100 | 3_1:-61347200 | None:intergenic |
| GATTGAAGCGGTGAGGACGT+GGG | 0.630623 | 3_1:-61344585 | None:intergenic |
| GGTGTTTGTGAAATTGCTGA+AGG | 0.632383 | 3_1:+61345774 | Msa0366460:intron |
| GTGTTTGTGAAATTGCTGAA+GGG | 0.634138 | 3_1:+61345775 | Msa0366460:CDS |
| TGTTTGTGAAATTGCTGAAG+GGG | 0.634167 | 3_1:+61345776 | Msa0366460:CDS |
| GATGATGATGTGACAACGAT+GGG | 0.645652 | 3_1:+61345274 | Msa0366460:CDS |
| GGTGGGGTTGAATACAAGGA+GGG | 0.645991 | 3_1:+61344895 | Msa0366460:CDS |
| CTTGGAAGAAGAGACACTAA+GGG | 0.646858 | 3_1:+61347835 | Msa0366460:CDS |
| GTTTGTGAAAATGCTGCTGA+GGG | 0.652459 | 3_1:+61345037 | Msa0366460:CDS |
| AGATAGAAACTCCGTCGTCG+CGG | 0.654431 | 3_1:-61344652 | None:intergenic |
| TGGTGGGGTTGAATACAAGG+AGG | 0.659145 | 3_1:+61344894 | Msa0366460:CDS |
| TCTCTGGTGATGAGGAAGCG+AGG | 0.659290 | 3_1:+61346845 | Msa0366460:CDS |
| GCTGATACTTCTAGTATGGG+AGG | 0.659390 | 3_1:+61345373 | Msa0366460:CDS |
| GGAGACTTCGGAGATTGAAG+CGG | 0.660281 | 3_1:-61344597 | None:intergenic |
| GTATTTGATTAATTCGCCGG+AGG | 0.663609 | 3_1:+61344727 | Msa0366460:CDS |
| TTAGGGCGATCACTACTACA+AGG | 0.663670 | 3_1:-61347159 | None:intergenic |
| TGATTGCGATGGTTTCGAAG+GGG | 0.666531 | 3_1:+61344987 | Msa0366460:CDS |
| GGTTTGTGTCCGGGTCCGGG+AGG | 0.667538 | 3_1:+61345013 | Msa0366460:CDS |
| GTTTGTGAAATTGCTGAAGG+GGG | 0.671919 | 3_1:+61345777 | Msa0366460:CDS |
| GATGATGTAGCATTGATGCA+TGG | 0.676861 | 3_1:+61345903 | Msa0366460:CDS |
| CTTCGGAGATTGAAGCGGTG+AGG | 0.694452 | 3_1:-61344592 | None:intergenic |
| GGGATGTTAGGGTTGCGGAG+AGG | 0.698750 | 3_1:+61344870 | Msa0366460:CDS |
| GCATTGATGCATGGAAATCG+TGG | 0.700381 | 3_1:+61345912 | Msa0366460:CDS |
| CAGAGAGTTTAACTCCCCTG+TGG | 0.700791 | 3_1:-61346828 | None:intergenic |
| TGATGATGATGTGACAACGA+TGG | 0.715098 | 3_1:+61345273 | Msa0366460:CDS |
| GGACGTGGGTTTGAAGAACG+CGG | 0.739427 | 3_1:-61344571 | None:intergenic |
| GCGGTGAAGAGGATTTGGAG+GGG | 0.745177 | 3_1:+61344773 | Msa0366460:CDS |
| TTGATTGAGAGAATACCACA+AGG | 0.748977 | 3_1:-61350500 | None:intergenic |
| CGTGGGTTTGAAGAACGCGG+AGG | 0.751005 | 3_1:-61344568 | None:intergenic |
| AAGTTGTGCTCAAACATACG+AGG | 0.752379 | 3_1:+61347245 | Msa0366460:CDS |
| TTTGTGAAAATGCTGCTGAG+GGG | 0.761669 | 3_1:+61345038 | Msa0366460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGATTTAAATTGTTTTAT+TGG | + | chr3_1:61346094-61346113 | Msa0366460:intron | 10.0% |
| !! | AATGTAAATAATAATCAAAT+AGG | - | chr3_1:61346725-61346744 | None:intergenic | 10.0% |
| !! | TTTAGTCATTAAATTAAACT+AGG | + | chr3_1:61345594-61345613 | Msa0366460:intron | 15.0% |
| !!! | AGGATATTAGAATTTTTATA+AGG | + | chr3_1:61345737-61345756 | Msa0366460:intron | 15.0% |
| !!! | GGATATTAGAATTTTTATAA+GGG | + | chr3_1:61345738-61345757 | Msa0366460:intron | 15.0% |
| !!! | AATTGTTATTTTTGTAAGTT+TGG | + | chr3_1:61346128-61346147 | Msa0366460:intron | 15.0% |
| !! | TATTTAGTCGAAAAATTTAT+CGG | - | chr3_1:61346871-61346890 | None:intergenic | 15.0% |
| !!! | GTTTTTTATTATCATTTAGA+TGG | + | chr3_1:61347626-61347645 | Msa0366460:intron | 15.0% |
| !! | AACATATTTGAATATAGAAA+TGG | + | chr3_1:61348065-61348084 | Msa0366460:intron | 15.0% |
| !!! | TAAAATTGAAGTGTTATTAA+CGG | - | chr3_1:61348141-61348160 | None:intergenic | 15.0% |
| !!! | CACTTCAATTTTATTATTTA+AGG | + | chr3_1:61348148-61348167 | Msa0366460:intron | 15.0% |
| !!! | ATAATAATAATTTTGATAGC+AGG | + | chr3_1:61349386-61349405 | Msa0366460:intron | 15.0% |
| !! | TCATTAAATTAAACTAGGTA+TGG | + | chr3_1:61345599-61345618 | Msa0366460:intron | 20.0% |
| !! | TTTAGTTGCAAAAAATTTCT+CGG | + | chr3_1:61345677-61345696 | Msa0366460:intron | 20.0% |
| !! | AATTTCCTGAAAATAATACT+CGG | + | chr3_1:61346013-61346032 | Msa0366460:intron | 20.0% |
| !!! | GTTTCTCTTTGTTTTTTATA+AGG | + | chr3_1:61346275-61346294 | Msa0366460:intron | 20.0% |
| !!! | ACAAACATTTTTATGTTTGT+TGG | + | chr3_1:61346617-61346636 | Msa0366460:intron | 20.0% |
| !! | ATTAGAACAGATAATTACAT+AGG | - | chr3_1:61347277-61347296 | None:intergenic | 20.0% |
| !!! | ATGGTTCGTAATTTTAATAA+CGG | - | chr3_1:61347451-61347470 | None:intergenic | 20.0% |
| !! | TAATAAAAAACAACAGTTGA+GGG | - | chr3_1:61347617-61347636 | None:intergenic | 20.0% |
| !! | ATAATAAAAAACAACAGTTG+AGG | - | chr3_1:61347618-61347637 | None:intergenic | 20.0% |
| !! | GAAATCATAATATATGAAAC+TGG | - | chr3_1:61347972-61347991 | None:intergenic | 20.0% |
| !! | AATTGCATTTCTAATGTTTA+TGG | + | chr3_1:61348278-61348297 | Msa0366460:intron | 20.0% |
| !! | TCTAATGTTTATGGATAATT+TGG | + | chr3_1:61348287-61348306 | Msa0366460:intron | 20.0% |
| !! | CTAATGTTTATGGATAATTT+GGG | + | chr3_1:61348288-61348307 | Msa0366460:intron | 20.0% |
| !!! | ATTTTTTTTTTCAGTTCACA+AGG | - | chr3_1:61348409-61348428 | None:intergenic | 20.0% |
| !! | TGTGAACTGAAAAAAAAAAT+AGG | + | chr3_1:61348409-61348428 | Msa0366460:intron | 20.0% |
| !! | GTGAACTGAAAAAAAAAATA+GGG | + | chr3_1:61348410-61348429 | Msa0366460:intron | 20.0% |
| !! | TTCAACTTCACTAAAAATTA+TGG | - | chr3_1:61348634-61348653 | None:intergenic | 20.0% |
| !! | TAATCTCAAATATCAAACTT+AGG | - | chr3_1:61348660-61348679 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTTCATTC+AGG | - | chr3_1:61348732-61348751 | None:intergenic | 20.0% |
| !! | GAATGAAATATAAGCAAAAA+CGG | + | chr3_1:61348732-61348751 | Msa0366460:intron | 20.0% |
| !! | TCCTGAAATATAAACAAAAA+GGG | - | chr3_1:61348819-61348838 | None:intergenic | 20.0% |
| !!! | TCAGGACTATATTTTAAAAA+CGG | + | chr3_1:61348833-61348852 | Msa0366460:intron | 20.0% |
| !!! | ACTATTTTTTTTGTCATTAG+CGG | + | chr3_1:61349257-61349276 | Msa0366460:intron | 20.0% |
| !!! | AACATATATCTGAAGTTTTA+TGG | + | chr3_1:61349613-61349632 | Msa0366460:intron | 20.0% |
| !!! | GAATCATTATAAACTAGTTT+CGG | - | chr3_1:61349659-61349678 | None:intergenic | 20.0% |
| !! | TTCAGCAAGATAAAAAATAT+GGG | - | chr3_1:61349751-61349770 | None:intergenic | 20.0% |
| !! | TTTCAGCAAGATAAAAAATA+TGG | - | chr3_1:61349752-61349771 | None:intergenic | 20.0% |
| !! | ACATTTACATGAAAAACAAA+AGG | - | chr3_1:61350228-61350247 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTCAATGAGTATT+TGG | - | chr3_1:61350426-61350445 | None:intergenic | 20.0% |
| !!! | TCATTTTTTGTGTTTCATGA+TGG | - | chr3_1:61344418-61344437 | None:intergenic | 25.0% |
| ! | AAACATTACAAACTGGATAA+TGG | + | chr3_1:61344442-61344461 | Msa0366460:CDS | 25.0% |
| ! | AAAGAGAAAATGAATGATGA+TGG | + | chr3_1:61345208-61345227 | Msa0366460:CDS | 25.0% |
| ! | AATCACTTCAAAACTAATGT+TGG | + | chr3_1:61345428-61345447 | Msa0366460:intron | 25.0% |
| !!! | ATTTTAGTTTTTGCTGTGTA+AGG | + | chr3_1:61345480-61345499 | Msa0366460:intron | 25.0% |
| ! | AAACAATAGTGTGTATTTGA+AGG | + | chr3_1:61345537-61345556 | Msa0366460:intron | 25.0% |
| ! | AACAATAGTGTGTATTTGAA+GGG | + | chr3_1:61345538-61345557 | Msa0366460:intron | 25.0% |
| ! | CATTAGTCATTGTTTAAGTA+AGG | + | chr3_1:61345717-61345736 | Msa0366460:intron | 25.0% |
| ! | TAATCATGAAACTAGCTATA+TGG | + | chr3_1:61346230-61346249 | Msa0366460:intron | 25.0% |
| !!! | ATCTGTCATTTGATTGTTTT+GGG | + | chr3_1:61346433-61346452 | Msa0366460:intron | 25.0% |
| ! | GTTCCTATCAATTAAAACTA+CGG | + | chr3_1:61346526-61346545 | Msa0366460:intron | 25.0% |
| ! | AATAATAATCAAATAGGCGT+AGG | - | chr3_1:61346719-61346738 | None:intergenic | 25.0% |
| !! | TATATCTTTTGTAGCCAATT+TGG | - | chr3_1:61347019-61347038 | None:intergenic | 25.0% |
| ! | TGTAATTATCTGTTCTAATC+TGG | + | chr3_1:61347278-61347297 | Msa0366460:intron | 25.0% |
| ! | GTAATTATCTGTTCTAATCT+GGG | + | chr3_1:61347279-61347298 | Msa0366460:intron | 25.0% |
| ! | TAATTATCTGTTCTAATCTG+GGG | + | chr3_1:61347280-61347299 | Msa0366460:intron | 25.0% |
| ! | ATATTCATATGTTCTCACTA+AGG | + | chr3_1:61347317-61347336 | Msa0366460:intron | 25.0% |
| ! | TATTCATATGTTCTCACTAA+GGG | + | chr3_1:61347318-61347337 | Msa0366460:intron | 25.0% |
| ! | TTGTATATGTGCTTTCTATT+GGG | + | chr3_1:61347710-61347729 | Msa0366460:intron | 25.0% |
| ! | ATAGCTCACTAGAAAATTTA+TGG | - | chr3_1:61347903-61347922 | None:intergenic | 25.0% |
| ! | ATTCACTATATTTCTTATGC+AGG | + | chr3_1:61348000-61348019 | Msa0366460:intron | 25.0% |
| !! | ATTATTTAAGGTTGATCTGA+AGG | + | chr3_1:61348160-61348179 | Msa0366460:intron | 25.0% |
| ! | CATTAGAAATGCAATTTGAA+AGG | - | chr3_1:61348274-61348293 | None:intergenic | 25.0% |
| ! | TCTGAAAAAATTCAGTACAT+TGG | + | chr3_1:61348469-61348488 | Msa0366460:intron | 25.0% |
| ! | GATGTACTTGATTAAAAATC+AGG | + | chr3_1:61348768-61348787 | Msa0366460:intron | 25.0% |
| !!! | ACCCTTTTTGTTTATATTTC+AGG | + | chr3_1:61348815-61348834 | Msa0366460:intron | 25.0% |
| ! | GTCCTGAAATATAAACAAAA+AGG | - | chr3_1:61348820-61348839 | None:intergenic | 25.0% |
| !!! | TTTTTAAACAGACTTGTTTG+AGG | + | chr3_1:61349137-61349156 | Msa0366460:intron | 25.0% |
| !! | TGCTCATTAAACAAAAGTAT+TGG | + | chr3_1:61349183-61349202 | Msa0366460:intron | 25.0% |
| !! | TTATAAACTAGTTTCGGAAA+AGG | - | chr3_1:61349653-61349672 | None:intergenic | 25.0% |
| !! | ACTAGTTTATAATGATTCAG+TGG | + | chr3_1:61349661-61349680 | Msa0366460:intron | 25.0% |
| ! | TCTTGCTGAAAAATCTATTA+TGG | + | chr3_1:61349761-61349780 | Msa0366460:intron | 25.0% |
| ! | TACAATGCATCAATTTGAAT+GGG | - | chr3_1:61349964-61349983 | None:intergenic | 25.0% |
| ! | ATACAATGCATCAATTTGAA+TGG | - | chr3_1:61349965-61349984 | None:intergenic | 25.0% |
| ! | ATAGAATTACAAACATAACC+TGG | + | chr3_1:61349983-61350002 | Msa0366460:intron | 25.0% |
| !! | CAAATTGAGTAGTATTTTAC+TGG | + | chr3_1:61350029-61350048 | Msa0366460:intron | 25.0% |
| !! | GTTTATCTTTTTGCGAATAT+GGG | + | chr3_1:61350115-61350134 | Msa0366460:CDS | 25.0% |
| !!! | TATTTGAACCGATCTTATTT+TGG | + | chr3_1:61350340-61350359 | Msa0366460:three_prime_UTR | 25.0% |
| ! | ATATACACAAGATTACTAAC+AGG | - | chr3_1:61350460-61350479 | None:intergenic | 25.0% |
| !! | TTTCATGATGGAAGATTTTG+GGG | - | chr3_1:61344406-61344425 | None:intergenic | 30.0% |
| !! | GTTTCATGATGGAAGATTTT+GGG | - | chr3_1:61344407-61344426 | None:intergenic | 30.0% |
| !! | TGTTTCATGATGGAAGATTT+TGG | - | chr3_1:61344408-61344427 | None:intergenic | 30.0% |
| TGAACGAAAACATTACAAAC+TGG | + | chr3_1:61344435-61344454 | Msa0366460:CDS | 30.0% | |
| !!! | GTTAGGGTTTTTTGAATTAG+GGG | - | chr3_1:61344500-61344519 | None:intergenic | 30.0% |
| !!! | GGTTAGGGTTTTTTGAATTA+GGG | - | chr3_1:61344501-61344520 | None:intergenic | 30.0% |
| ! | GAAGTATTTGATTAATTCGC+CGG | + | chr3_1:61344724-61344743 | Msa0366460:CDS | 30.0% |
| AAATCATGGTAATCAGCAAT+TGG | + | chr3_1:61345123-61345142 | Msa0366460:CDS | 30.0% | |
| AAATCATGGCAATGAAGAAT+TGG | + | chr3_1:61345300-61345319 | Msa0366460:CDS | 30.0% | |
| ! | TCTCTCTTGTGTGTTTTATA+AGG | + | chr3_1:61345643-61345662 | Msa0366460:intron | 30.0% |
| ! | CTCTCTTGTGTGTTTTATAA+GGG | + | chr3_1:61345644-61345663 | Msa0366460:intron | 30.0% |
| AAGGAGAAAATGAATGATGA+TGG | + | chr3_1:61345843-61345862 | Msa0366460:CDS | 30.0% | |
| !! | AATGATAATGGCAATGTTGA+CGG | + | chr3_1:61345876-61345895 | Msa0366460:CDS | 30.0% |
| ! | AATCTCCGAGTATTATTTTC+AGG | - | chr3_1:61346021-61346040 | None:intergenic | 30.0% |
| ATGCAGTTACTTAAACCTTT+AGG | - | chr3_1:61346190-61346209 | None:intergenic | 30.0% | |
| TTCAACAGTCATTGTTTAAG+TGG | + | chr3_1:61346346-61346365 | Msa0366460:intron | 30.0% | |
| AGTCATTGTTTAAGTGGTTA+TGG | + | chr3_1:61346352-61346371 | Msa0366460:intron | 30.0% | |
| GTCATTGTTTAAGTGGTTAT+GGG | + | chr3_1:61346353-61346372 | Msa0366460:intron | 30.0% | |
| ! | TGACAGATCTATTTTCTTTG+AGG | - | chr3_1:61346421-61346440 | None:intergenic | 30.0% |
| !! | GATCTGTCATTTGATTGTTT+TGG | + | chr3_1:61346432-61346451 | Msa0366460:intron | 30.0% |
| ! | TTTGTTTGTGTTGCCTTTTA+AGG | + | chr3_1:61346499-61346518 | Msa0366460:intron | 30.0% |
| !!! | ACTCCGTAGTTTTAATTGAT+AGG | - | chr3_1:61346532-61346551 | None:intergenic | 30.0% |
| AACATGAGATTGATATCATG+TGG | - | chr3_1:61346594-61346613 | None:intergenic | 30.0% | |
| ! | CTGTTTCTCCAATAGAAATT+CGG | + | chr3_1:61346758-61346777 | Msa0366460:intron | 30.0% |
| TTGTCTTTCCGAATTTCTAT+TGG | - | chr3_1:61346769-61346788 | None:intergenic | 30.0% | |
| ATAGAAATTCGGAAAGACAA+TGG | + | chr3_1:61346769-61346788 | Msa0366460:intron | 30.0% | |
| CTCCAAAGAACTTGATTTAA+GGG | - | chr3_1:61346935-61346954 | None:intergenic | 30.0% | |
| CTACAAAAGATATAAATCGC+AGG | + | chr3_1:61347025-61347044 | Msa0366460:CDS | 30.0% | |
| AATTATCTGTTCTAATCTGG+GGG | + | chr3_1:61347281-61347300 | Msa0366460:intron | 30.0% | |
| GATTCAACACATTGCATTTA+TGG | - | chr3_1:61347536-61347555 | None:intergenic | 30.0% | |
| AAATGCAATGTGTTGAATCA+TGG | + | chr3_1:61347537-61347556 | Msa0366460:intron | 30.0% | |
| CTTGTATATGTGCTTTCTAT+TGG | + | chr3_1:61347709-61347728 | Msa0366460:intron | 30.0% | |
| ! | TTATTTCCTTCTTTTTGCAG+TGG | + | chr3_1:61347747-61347766 | Msa0366460:intron | 30.0% |
| ! | TATTTCCTTCTTTTTGCAGT+GGG | + | chr3_1:61347748-61347767 | Msa0366460:intron | 30.0% |
| !! | AATTTTCTAGTGAGCTATCA+TGG | + | chr3_1:61347905-61347924 | Msa0366460:intron | 30.0% |
| CTATATTTCTTATGCAGGTT+TGG | + | chr3_1:61348005-61348024 | Msa0366460:intron | 30.0% | |
| ATATGTTGCTGTAAAAGTCT+AGG | - | chr3_1:61348052-61348071 | None:intergenic | 30.0% | |
| CGTTTAAAAAAGGAAGAATC+AGG | - | chr3_1:61348349-61348368 | None:intergenic | 30.0% | |
| !!! | TCTTCCTTTTTTAAACGAAG+AGG | + | chr3_1:61348352-61348371 | Msa0366460:intron | 30.0% |
| !!! | CTTCCTTTTTTAAACGAAGA+GGG | + | chr3_1:61348353-61348372 | Msa0366460:intron | 30.0% |
| !!! | TTCCTTTTTTAAACGAAGAG+GGG | + | chr3_1:61348354-61348373 | Msa0366460:intron | 30.0% |
| AAATCTTATGCCACTAGATA+AGG | + | chr3_1:61348585-61348604 | Msa0366460:intron | 30.0% | |
| ACTTATTTGACCTTATCTAG+TGG | - | chr3_1:61348598-61348617 | None:intergenic | 30.0% | |
| TCAAATAAGTCAATCCAATC+AGG | + | chr3_1:61348608-61348627 | Msa0366460:intron | 30.0% | |
| ACTAAAAATTATGGCCTGAT+TGG | - | chr3_1:61348625-61348644 | None:intergenic | 30.0% | |
| TCTCAAATATCAAACTTAGG+TGG | - | chr3_1:61348657-61348676 | None:intergenic | 30.0% | |
| TGCTTATATTTCATTCAGGA+GGG | - | chr3_1:61348728-61348747 | None:intergenic | 30.0% | |
| TTGCTTATATTTCATTCAGG+AGG | - | chr3_1:61348729-61348748 | None:intergenic | 30.0% | |
| TGAGACTTGTCTTGAAAATT+TGG | + | chr3_1:61349002-61349021 | Msa0366460:intron | 30.0% | |
| AGACAAGAATGCAGATATAA+AGG | - | chr3_1:61349526-61349545 | None:intergenic | 30.0% | |
| CTATAAAGTTCTACATGGAA+TGG | - | chr3_1:61349803-61349822 | None:intergenic | 30.0% | |
| ACATGCTATAAAGTTCTACA+TGG | - | chr3_1:61349808-61349827 | None:intergenic | 30.0% | |
| ! | ACTTATGCATGAAATTTTCG+TGG | + | chr3_1:61349872-61349891 | Msa0366460:intron | 30.0% |
| ! | ATTGAGTAGTATTTTACTGG+TGG | + | chr3_1:61350032-61350051 | Msa0366460:intron | 30.0% |
| !! | TGACTTGCTGTATAAATTTC+AGG | + | chr3_1:61350093-61350112 | Msa0366460:intron | 30.0% |
| ! | GGTTTATCTTTTTGCGAATA+TGG | + | chr3_1:61350114-61350133 | Msa0366460:intron | 30.0% |
| TACAATTCAGATCTCAAAGT+TGG | - | chr3_1:61350166-61350185 | None:intergenic | 30.0% | |
| !!! | TTCTTTGTTTTTAGCCATCT+AGG | + | chr3_1:61350267-61350286 | Msa0366460:three_prime_UTR | 30.0% |
| !!! | TCTTTGTTTTTAGCCATCTA+GGG | + | chr3_1:61350268-61350287 | Msa0366460:three_prime_UTR | 30.0% |
| !!! | TTTTTTGAATTAGGGGATCG+GGG | - | chr3_1:61344493-61344512 | None:intergenic | 35.0% |
| !!! | GTTTTTTGAATTAGGGGATC+GGG | - | chr3_1:61344494-61344513 | None:intergenic | 35.0% |
| !!! | GGTTTTTTGAATTAGGGGAT+CGG | - | chr3_1:61344495-61344514 | None:intergenic | 35.0% |
| !!! | GGGTTAGGGTTTTTTGAATT+AGG | - | chr3_1:61344502-61344521 | None:intergenic | 35.0% |
| !!! | GGTTTTTTTGAGACGTGAAT+CGG | - | chr3_1:61344543-61344562 | None:intergenic | 35.0% |
| TTTCTATCTCGAATGCGTTT+CGG | + | chr3_1:61344666-61344685 | Msa0366460:CDS | 35.0% | |
| ! | TGAAGTGAAGAGGTTTTTGA+AGG | + | chr3_1:61344928-61344947 | Msa0366460:CDS | 35.0% |
| ! | GTTTCTTGATTTGATTGCGA+TGG | + | chr3_1:61344976-61344995 | Msa0366460:CDS | 35.0% |
| TAGAAGGTTGTTAGAAGGTT+TGG | + | chr3_1:61345063-61345082 | Msa0366460:CDS | 35.0% | |
| AGAAGGTTGTTAGAAGGTTT+GGG | + | chr3_1:61345064-61345083 | Msa0366460:CDS | 35.0% | |
| ! | AGTGAATGATGATGTAGCAA+TGG | + | chr3_1:61345096-61345115 | Msa0366460:CDS | 35.0% |
| ! | GTGAATGATGATGTAGCAAT+GGG | + | chr3_1:61345097-61345116 | Msa0366460:CDS | 35.0% |
| AATCAGCAATTGGAAGAGAA+TGG | + | chr3_1:61345133-61345152 | Msa0366460:CDS | 35.0% | |
| TGTTGGAGAGTTGAAAAGTT+TGG | + | chr3_1:61345445-61345464 | Msa0366460:intron | 35.0% | |
| !! | TTTTGCTGTGTAAGGTTTGA+TGG | + | chr3_1:61345488-61345507 | Msa0366460:intron | 35.0% |
| GTGTTTGTGAAATTGCTGAA+GGG | + | chr3_1:61345775-61345794 | Msa0366460:CDS | 35.0% | |
| TGTTTGTGAAATTGCTGAAG+GGG | + | chr3_1:61345776-61345795 | Msa0366460:CDS | 35.0% | |
| ! | GGTGATGATGAGAATGATAA+TGG | + | chr3_1:61345864-61345883 | Msa0366460:CDS | 35.0% |
| AAATCGTGGCAATGAACAAT+TGG | + | chr3_1:61345926-61345945 | Msa0366460:CDS | 35.0% | |
| !! | ACTTCTGGAATGAGAGATAA+AGG | + | chr3_1:61345963-61345982 | Msa0366460:CDS | 35.0% |
| ! | GAGTGTATTTGAAGTCCTAA+AGG | + | chr3_1:61346172-61346191 | Msa0366460:intron | 35.0% |
| GGTTTAAGTAACTGCATAAG+TGG | + | chr3_1:61346193-61346212 | Msa0366460:intron | 35.0% | |
| TAGTGCATATATCGAGAACA+TGG | - | chr3_1:61346322-61346341 | None:intergenic | 35.0% | |
| AAGGCAACACAAACAAAGTA+AGG | - | chr3_1:61346496-61346515 | None:intergenic | 35.0% | |
| GATAGGAACAACACCTTAAA+AGG | - | chr3_1:61346515-61346534 | None:intergenic | 35.0% | |
| GTCCCTTAAATCAAGTTCTT+TGG | + | chr3_1:61346930-61346949 | Msa0366460:CDS | 35.0% | |
| GCTCCAAAGAACTTGATTTA+AGG | - | chr3_1:61346936-61346955 | None:intergenic | 35.0% | |
| !! | TTCTTTGGAGCTAAAAGCAT+TGG | + | chr3_1:61346945-61346964 | Msa0366460:CDS | 35.0% |
| TGTAGCCAATTTGGATCTTA+CGG | - | chr3_1:61347010-61347029 | None:intergenic | 35.0% | |
| TTGGCAAAATTGGCATCATT+AGG | - | chr3_1:61347126-61347145 | None:intergenic | 35.0% | |
| ! | TAATGATGCCAATTTTGCCA+AGG | + | chr3_1:61347125-61347144 | Msa0366460:CDS | 35.0% |
| GACTACCATTACTACAGTTA+GGG | - | chr3_1:61347179-61347198 | None:intergenic | 35.0% | |
| GACGATCATTACTATAGTTG+GGG | - | chr3_1:61347203-61347222 | None:intergenic | 35.0% | |
| CGACGATCATTACTATAGTT+GGG | - | chr3_1:61347204-61347223 | None:intergenic | 35.0% | |
| TTTACAAGACAGCATCCTTT+AGG | - | chr3_1:61347344-61347363 | None:intergenic | 35.0% | |
| ! | GCAGTATTTAAAACAGTGGT+GGG | - | chr3_1:61347426-61347445 | None:intergenic | 35.0% |
| ! | AGCAGTATTTAAAACAGTGG+TGG | - | chr3_1:61347427-61347446 | None:intergenic | 35.0% |
| TACGAACCATTACACGAAAT+TGG | + | chr3_1:61347461-61347480 | Msa0366460:intron | 35.0% | |
| !! | TTGTGTTTGGTGGTTTCTTT+TGG | + | chr3_1:61347660-61347679 | Msa0366460:intron | 35.0% |
| ! | CATTTCCTTTTCTTCCTTCT+TGG | - | chr3_1:61347809-61347828 | None:intergenic | 35.0% |
| CAAGAAGGAAGAAAAGGAAA+TGG | + | chr3_1:61347807-61347826 | Msa0366460:CDS | 35.0% | |
| GATGCAAGTTATACTTGAAG+CGG | + | chr3_1:61347927-61347946 | Msa0366460:intron | 35.0% | |
| ACAAGTGGAGAAATATGATG+CGG | + | chr3_1:61348183-61348202 | Msa0366460:intron | 35.0% | |
| CTTCCTAGGATATATACACA+GGG | - | chr3_1:61348230-61348249 | None:intergenic | 35.0% | |
| CAAGAAAACAATACCTTCCT+AGG | - | chr3_1:61348244-61348263 | None:intergenic | 35.0% | |
| GAAATGCAATTTGAAAGGAC+AGG | - | chr3_1:61348269-61348288 | None:intergenic | 35.0% | |
| TACCCCTCTTCGTTTAAAAA+AGG | - | chr3_1:61348359-61348378 | None:intergenic | 35.0% | |
| ! | CCAAGACTTTAGGAATAATG+GGG | - | chr3_1:61349223-61349242 | None:intergenic | 35.0% |
| ! | GCCAAGACTTTAGGAATAAT+GGG | - | chr3_1:61349224-61349243 | None:intergenic | 35.0% |
| AAAAAATAGTACTCCGACCA+GGG | - | chr3_1:61349247-61349266 | None:intergenic | 35.0% | |
| AAAAAAATAGTACTCCGACC+AGG | - | chr3_1:61349248-61349267 | None:intergenic | 35.0% | |
| CACAGTAACTGTACAAAACA+CGG | - | chr3_1:61349294-61349313 | None:intergenic | 35.0% | |
| ! | TTTTGTACAGTTACTGTGTC+AGG | + | chr3_1:61349296-61349315 | Msa0366460:intron | 35.0% |
| TTTGTACAGTTACTGTGTCA+GGG | + | chr3_1:61349297-61349316 | Msa0366460:intron | 35.0% | |
| ATGCAGATATAAAGGAGAAG+TGG | - | chr3_1:61349518-61349537 | None:intergenic | 35.0% | |
| ATATCTGCATTCTTGTCTCA+AGG | + | chr3_1:61349528-61349547 | Msa0366460:intron | 35.0% | |
| TATCTGCATTCTTGTCTCAA+GGG | + | chr3_1:61349529-61349548 | Msa0366460:intron | 35.0% | |
| !! | ATCTGAAGTTTTATGGCTGT+TGG | + | chr3_1:61349620-61349639 | Msa0366460:intron | 35.0% |
| !!! | GTATTGAGCTTTTAAGATGC+AGG | - | chr3_1:61349729-61349748 | None:intergenic | 35.0% |
| TTCTACATGGAATGGTTAAG+TGG | - | chr3_1:61349795-61349814 | None:intergenic | 35.0% | |
| AAACAGAAGACAGTTATGAC+TGG | + | chr3_1:61349841-61349860 | Msa0366460:intron | 35.0% | |
| ! | GAAATTTTCGTGGCAAGTTT+AGG | + | chr3_1:61349882-61349901 | Msa0366460:intron | 35.0% |
| ! | ACTCAATTTGTTCAGCAGTT+AGG | - | chr3_1:61350019-61350038 | None:intergenic | 35.0% |
| ! | AGTAGTATTTTACTGGTGGT+GGG | + | chr3_1:61350036-61350055 | Msa0366460:intron | 35.0% |
| ! | ATTCAGATCTCAAAGTTGGT+AGG | - | chr3_1:61350162-61350181 | None:intergenic | 35.0% |
| TTGATTAGCAATACCCTAGA+TGG | - | chr3_1:61350284-61350303 | None:intergenic | 35.0% | |
| TGTCTCTTCTAACATGAGTT+GGG | + | chr3_1:61350381-61350400 | Msa0366460:three_prime_UTR | 35.0% | |
| TTGATTGAGAGAATACCACA+AGG | - | chr3_1:61350503-61350522 | None:intergenic | 35.0% | |
| GAGATGTTCGAGGATTTGAA+GGG | - | chr3_1:61344621-61344640 | None:intergenic | 40.0% | |
| AAATCTCTTCGAGATGTTCG+AGG | - | chr3_1:61344631-61344650 | None:intergenic | 40.0% | |
| GTATTTGATTAATTCGCCGG+AGG | + | chr3_1:61344727-61344746 | Msa0366460:CDS | 40.0% | |
| ! | TCCGTCTGGTGAGTATTTTT+CGG | + | chr3_1:61344751-61344770 | Msa0366460:CDS | 40.0% |
| TTTGATTGCGATGGTTTCGA+AGG | + | chr3_1:61344985-61345004 | Msa0366460:CDS | 40.0% | |
| TTGATTGCGATGGTTTCGAA+GGG | + | chr3_1:61344986-61345005 | Msa0366460:CDS | 40.0% | |
| TGTTTGTGAAAATGCTGCTG+AGG | + | chr3_1:61345036-61345055 | Msa0366460:CDS | 40.0% | |
| GTTTGTGAAAATGCTGCTGA+GGG | + | chr3_1:61345037-61345056 | Msa0366460:CDS | 40.0% | |
| TTTGTGAAAATGCTGCTGAG+GGG | + | chr3_1:61345038-61345057 | Msa0366460:CDS | 40.0% | |
| GAAGGTTGTTAGAAGGTTTG+GGG | + | chr3_1:61345065-61345084 | Msa0366460:CDS | 40.0% | |
| GTAGCAATGGGTGAAAATCA+TGG | + | chr3_1:61345109-61345128 | Msa0366460:CDS | 40.0% | |
| AATGGGAGAGTAGAAGGTTT+AGG | + | chr3_1:61345184-61345203 | Msa0366460:CDS | 40.0% | |
| ATGGGAGAGTAGAAGGTTTA+GGG | + | chr3_1:61345185-61345204 | Msa0366460:CDS | 40.0% | |
| ! | GATGATGGTGATGATGAGAA+TGG | + | chr3_1:61345223-61345242 | Msa0366460:CDS | 40.0% |
| ! | TGATGATGATGTGACAACGA+TGG | + | chr3_1:61345273-61345292 | Msa0366460:CDS | 40.0% |
| ! | GATGATGATGTGACAACGAT+GGG | + | chr3_1:61345274-61345293 | Msa0366460:CDS | 40.0% |
| ACAACGATGGGTGAAAATCA+TGG | + | chr3_1:61345286-61345305 | Msa0366460:CDS | 40.0% | |
| GAAGAATTGGAAGACAGAGT+TGG | + | chr3_1:61345313-61345332 | Msa0366460:CDS | 40.0% | |
| TACTTCTGTTGATGCGAATC+AGG | + | chr3_1:61345336-61345355 | Msa0366460:CDS | 40.0% | |
| CGAGCTGATACTTCTAGTAT+GGG | + | chr3_1:61345370-61345389 | Msa0366460:CDS | 40.0% | |
| ATTTCACAAACACCTTCAGG+AGG | - | chr3_1:61345768-61345787 | None:intergenic | 40.0% | |
| GCAATTTCACAAACACCTTC+AGG | - | chr3_1:61345771-61345790 | None:intergenic | 40.0% | |
| GGTGTTTGTGAAATTGCTGA+AGG | + | chr3_1:61345774-61345793 | Msa0366460:intron | 40.0% | |
| GTTTGTGAAATTGCTGAAGG+GGG | + | chr3_1:61345777-61345796 | Msa0366460:CDS | 40.0% | |
| ! | AAGATTTGAGGAAGCGTGAT+GGG | + | chr3_1:61345802-61345821 | Msa0366460:CDS | 40.0% |
| !! | GATGATGTAGCATTGATGCA+TGG | + | chr3_1:61345903-61345922 | Msa0366460:CDS | 40.0% |
| TGCACTACAAAAAAGCCACA+GGG | + | chr3_1:61346813-61346832 | Msa0366460:CDS | 40.0% | |
| ! | AGTTAAACTCTCTGGTGATG+AGG | + | chr3_1:61346837-61346856 | Msa0366460:CDS | 40.0% |
| ! | GTGCTGATGTGAAGAAACTT+CGG | + | chr3_1:61346905-61346924 | Msa0366460:CDS | 40.0% |
| TGCTGATGTGAAGAAACTTC+GGG | + | chr3_1:61346906-61346925 | Msa0366460:CDS | 40.0% | |
| TGAAGCCGTAAGATCCAAAT+TGG | + | chr3_1:61347002-61347021 | Msa0366460:CDS | 40.0% | |
| !! | ATGTTCACTCTGCTTTTCAC+TGG | - | chr3_1:61347055-61347074 | None:intergenic | 40.0% |
| TTGGCATCATTAGGCTGATA+TGG | - | chr3_1:61347117-61347136 | None:intergenic | 40.0% | |
| TCACTACTACAAGGAACAGA+AGG | - | chr3_1:61347153-61347172 | None:intergenic | 40.0% | |
| CGACTACCATTACTACAGTT+AGG | - | chr3_1:61347180-61347199 | None:intergenic | 40.0% | |
| GCGACGATCATTACTATAGT+TGG | - | chr3_1:61347205-61347224 | None:intergenic | 40.0% | |
| AAGTTGTGCTCAAACATACG+AGG | + | chr3_1:61347245-61347264 | Msa0366460:CDS | 40.0% | |
| ! | GGCAGCAGTATTTAAAACAG+TGG | - | chr3_1:61347430-61347449 | None:intergenic | 40.0% |
| TCAACGCCAATTTCGTGTAA+TGG | - | chr3_1:61347470-61347489 | None:intergenic | 40.0% | |
| GGTTAAGAGTCTCTTGTGTT+TGG | + | chr3_1:61347647-61347666 | Msa0366460:intron | 40.0% | |
| TAAGAGTCTCTTGTGTTTGG+TGG | + | chr3_1:61347650-61347669 | Msa0366460:intron | 40.0% | |
| !! | GTGGTTTCTTTTGGTTGTTG+TGG | + | chr3_1:61347669-61347688 | Msa0366460:intron | 40.0% |
| ATGTGCTTTCTATTGGGCAT+TGG | + | chr3_1:61347716-61347735 | Msa0366460:intron | 40.0% | |
| ATCATCCCACTGCAAAAAGA+AGG | - | chr3_1:61347756-61347775 | None:intergenic | 40.0% | |
| ! | GAAAAGGAAATGGACTTCCT+TGG | + | chr3_1:61347817-61347836 | Msa0366460:CDS | 40.0% |
| CTTGGAAGAAGAGACACTAA+GGG | + | chr3_1:61347835-61347854 | Msa0366460:CDS | 40.0% | |
| TTCTTATGCAGGTTTGGAGA+AGG | + | chr3_1:61348011-61348030 | Msa0366460:intron | 40.0% | |
| CATCCCTGTGTATATATCCT+AGG | + | chr3_1:61348224-61348243 | Msa0366460:intron | 40.0% | |
| CCTTCCTAGGATATATACAC+AGG | - | chr3_1:61348231-61348250 | None:intergenic | 40.0% | |
| CCTGTGTATATATCCTAGGA+AGG | + | chr3_1:61348228-61348247 | Msa0366460:intron | 40.0% | |
| ! | TTTTAAACGAAGAGGGGTAG+AGG | + | chr3_1:61348360-61348379 | Msa0366460:intron | 40.0% |
| CTAGTGGCATAAGATTTGTG+AGG | - | chr3_1:61348582-61348601 | None:intergenic | 40.0% | |
| CTGAACTTGACGATGTTTCA+AGG | + | chr3_1:61348886-61348905 | Msa0366460:intron | 40.0% | |
| ! | TAGGAATAATGGGGTAGCTT+TGG | - | chr3_1:61349214-61349233 | None:intergenic | 40.0% |
| CCCCATTATTCCTAAAGTCT+TGG | + | chr3_1:61349220-61349239 | Msa0366460:intron | 40.0% | |
| ! | GGCCAAGACTTTAGGAATAA+TGG | - | chr3_1:61349225-61349244 | None:intergenic | 40.0% |
| AAAAATAGTACTCCGACCAG+GGG | - | chr3_1:61349246-61349265 | None:intergenic | 40.0% | |
| ! | TGGGTTCTAACATGGACTTT+GGG | - | chr3_1:61349489-61349508 | None:intergenic | 40.0% |
| AAAGGAGAAGTGGTTTGAGT+GGG | - | chr3_1:61349508-61349527 | None:intergenic | 40.0% | |
| TAAAGGAGAAGTGGTTTGAG+TGG | - | chr3_1:61349509-61349528 | None:intergenic | 40.0% | |
| TAAGGTTAGACTCTAAGTGC+AGG | + | chr3_1:61349570-61349589 | Msa0366460:intron | 40.0% | |
| CAGTTAGGAACTACAAAACC+AGG | - | chr3_1:61350004-61350023 | None:intergenic | 40.0% | |
| ! | GAGTAGTATTTTACTGGTGG+TGG | + | chr3_1:61350035-61350054 | Msa0366460:intron | 40.0% |
| !! | GTAGTATTTTACTGGTGGTG+GGG | + | chr3_1:61350037-61350056 | Msa0366460:intron | 40.0% |
| ! | GCAAGTCAGTATACCTTTTC+TGG | - | chr3_1:61350081-61350100 | None:intergenic | 40.0% |
| CGAATATGGGCAACTTGAAA+GGG | + | chr3_1:61350128-61350147 | Msa0366460:CDS | 40.0% | |
| CTGCGTTGCCAAAATAAGAT+CGG | - | chr3_1:61350351-61350370 | None:intergenic | 40.0% | |
| !!! | TCTTATTTTGGCAACGCAGT+TGG | + | chr3_1:61350352-61350371 | Msa0366460:three_prime_UTR | 40.0% |
| TCATGTTAGAAGAGACAGTC+AGG | - | chr3_1:61350378-61350397 | None:intergenic | 40.0% | |
| CTGTCTCTTCTAACATGAGT+TGG | + | chr3_1:61350380-61350399 | Msa0366460:three_prime_UTR | 40.0% | |
| !! | CGTACTTGTTTTCTTCCTTG+TGG | + | chr3_1:61350485-61350504 | Msa0366460:three_prime_UTR | 40.0% |
| GAGGATTTGAAGGGAGACTT+CGG | - | chr3_1:61344612-61344631 | None:intergenic | 45.0% | |
| CGAGATGTTCGAGGATTTGA+AGG | - | chr3_1:61344622-61344641 | None:intergenic | 45.0% | |
| TGCTGTTGCGGTTGAATGTA+CGG | + | chr3_1:61344700-61344719 | Msa0366460:CDS | 45.0% | |
| GCCGAAAAATACTCACCAGA+CGG | - | chr3_1:61344755-61344774 | None:intergenic | 45.0% | |
| !! | GTCTGGTGAGTATTTTTCGG+CGG | + | chr3_1:61344754-61344773 | Msa0366460:CDS | 45.0% |
| !! | AGTATTTTTCGGCGGTGAAG+AGG | + | chr3_1:61344762-61344781 | Msa0366460:CDS | 45.0% |
| GTTGAATACAAGGAGGGATG+CGG | + | chr3_1:61344901-61344920 | Msa0366460:CDS | 45.0% | |
| ATGCGGTTGTTGAAGTGAAG+AGG | + | chr3_1:61344918-61344937 | Msa0366460:CDS | 45.0% | |
| !! | AGAGGTTTTTGAAGGAAGCG+TGG | + | chr3_1:61344936-61344955 | Msa0366460:CDS | 45.0% |
| !! | GAGGTTTTTGAAGGAAGCGT+GGG | + | chr3_1:61344937-61344956 | Msa0366460:CDS | 45.0% |
| !! | AGGTTTTTGAAGGAAGCGTG+GGG | + | chr3_1:61344938-61344957 | Msa0366460:CDS | 45.0% |
| TGATTGCGATGGTTTCGAAG+GGG | + | chr3_1:61344987-61345006 | Msa0366460:CDS | 45.0% | |
| ! | GCATTTTCACAAACACCTCC+CGG | - | chr3_1:61345031-61345050 | None:intergenic | 45.0% |
| GGGAGTAGAAGGTTGTTAGA+AGG | + | chr3_1:61345058-61345077 | Msa0366460:CDS | 45.0% | |
| GCAATTGGAAGAGAATGGCT+CGG | + | chr3_1:61345138-61345157 | Msa0366460:CDS | 45.0% | |
| CAATTGGAAGAGAATGGCTC+GGG | + | chr3_1:61345139-61345158 | Msa0366460:CDS | 45.0% | |
| TGTTGATGCGAATCAGGAAG+TGG | + | chr3_1:61345342-61345361 | Msa0366460:CDS | 45.0% | |
| GCGAGCTGATACTTCTAGTA+TGG | + | chr3_1:61345369-61345388 | Msa0366460:CDS | 45.0% | |
| GCTGATACTTCTAGTATGGG+AGG | + | chr3_1:61345373-61345392 | Msa0366460:CDS | 45.0% | |
| GGTTTGAGTAGCTGCATAAG+TGG | + | chr3_1:61345559-61345578 | Msa0366460:intron | 45.0% | |
| TATAAGGGTTTGCCTCCTGA+AGG | + | chr3_1:61345753-61345772 | Msa0366460:intron | 45.0% | |
| ! | GAAGATTTGAGGAAGCGTGA+TGG | + | chr3_1:61345801-61345820 | Msa0366460:CDS | 45.0% |
| ! | GCATTGATGCATGGAAATCG+TGG | + | chr3_1:61345912-61345931 | Msa0366460:CDS | 45.0% |
| TCTTATTCCCTACCCATTGC+AGG | + | chr3_1:61346561-61346580 | Msa0366460:intron | 45.0% | |
| GTGCACTACAAAAAAGCCAC+AGG | + | chr3_1:61346812-61346831 | Msa0366460:CDS | 45.0% | |
| GCACTACAAAAAAGCCACAG+GGG | + | chr3_1:61346814-61346833 | Msa0366460:CDS | 45.0% | |
| TCAGATGTGTGCAATGCATC+AGG | - | chr3_1:61346985-61347004 | None:intergenic | 45.0% | |
| AGAAGGCTCCTTGGCAAAAT+TGG | - | chr3_1:61347136-61347155 | None:intergenic | 45.0% | |
| TTAGGGCGATCACTACTACA+AGG | - | chr3_1:61347162-61347181 | None:intergenic | 45.0% | |
| GATCGCCCTAACTGTAGTAA+TGG | + | chr3_1:61347171-61347190 | Msa0366460:CDS | 45.0% | |
| TATCTGTTCTAATCTGGGGG+TGG | + | chr3_1:61347284-61347303 | Msa0366460:intron | 45.0% | |
| TGTTCTCACTAAGGGCCTAA+AGG | + | chr3_1:61347326-61347345 | Msa0366460:intron | 45.0% | |
| !! | TCATGATGCTTGCTGTCTCT+TGG | + | chr3_1:61347375-61347394 | Msa0366460:intron | 45.0% |
| TGAACATCTGCAGAATCCAC+AGG | - | chr3_1:61347594-61347613 | None:intergenic | 45.0% | |
| ! | CTTCTTGGCTGACTTTGTTG+CGG | - | chr3_1:61347794-61347813 | None:intergenic | 45.0% |
| GTCAGCCAAGAAGGAAGAAA+AGG | + | chr3_1:61347801-61347820 | Msa0366460:CDS | 45.0% | |
| CCTTAGTGTCTCTTCTTCCA+AGG | - | chr3_1:61347837-61347856 | None:intergenic | 45.0% | |
| CCTTGGAAGAAGAGACACTA+AGG | + | chr3_1:61347834-61347853 | Msa0366460:CDS | 45.0% | |
| ! | AGGTTGATCTGAAGGACAAG+TGG | + | chr3_1:61348168-61348187 | Msa0366460:intron | 45.0% |
| ! | TTGATAGCAGGTTTGAGCTG+TGG | + | chr3_1:61349398-61349417 | Msa0366460:intron | 45.0% |
| TCCAACTAGTGCAGATAGTG+AGG | + | chr3_1:61349444-61349463 | Msa0366460:CDS | 45.0% | |
| ACCTCACTATCTGCACTAGT+TGG | - | chr3_1:61349448-61349467 | None:intergenic | 45.0% | |
| ! | GTGGGTTCTAACATGGACTT+TGG | - | chr3_1:61349490-61349509 | None:intergenic | 45.0% |
| ! | GGTTTGAGTGGGTTCTAACA+TGG | - | chr3_1:61349497-61349516 | None:intergenic | 45.0% |
| ATTCTTGTCTCAAGGGCTCA+GGG | + | chr3_1:61349536-61349555 | Msa0366460:intron | 45.0% | |
| CTCAGGGCTCATCTTAACTA+AGG | + | chr3_1:61349552-61349571 | Msa0366460:intron | 45.0% | |
| GGAATGGTTAAGTGGCAAGT+AGG | - | chr3_1:61349787-61349806 | None:intergenic | 45.0% | |
| GTGCTGAATCTTGCCAGAAA+AGG | + | chr3_1:61350065-61350084 | Msa0366460:intron | 45.0% | |
| GCGAATATGGGCAACTTGAA+AGG | + | chr3_1:61350127-61350146 | Msa0366460:CDS | 45.0% | |
| ! | TCTAACATGAGTTGGGCGAT+TGG | + | chr3_1:61350388-61350407 | Msa0366460:three_prime_UTR | 45.0% |
| AATGAGTATTTGGCAGCCCT+AGG | - | chr3_1:61350416-61350435 | None:intergenic | 45.0% | |
| !! | ATGATTTAAATTATAATTAT+CGG | + | chr3_1:61345513-61345532 | Msa0366460:intron | 5.0% |
| !!! | TATAAAATTTTAATCTTAAA+TGG | + | chr3_1:61346457-61346476 | Msa0366460:intron | 5.0% |
| !!! | ATAAAATTTTAATCTTAAAT+GGG | + | chr3_1:61346458-61346477 | Msa0366460:intron | 5.0% |
| TTGAATTAGGGGATCGGGGA+CGG | - | chr3_1:61344489-61344508 | None:intergenic | 50.0% | |
| GGAGAGTGGAAGTAGGGTTA+GGG | - | chr3_1:61344516-61344535 | None:intergenic | 50.0% | |
| CTAACCCTACTTCCACTCTC+CGG | + | chr3_1:61344515-61344534 | Msa0366460:CDS | 50.0% | |
| GGAGACTTCGGAGATTGAAG+CGG | - | chr3_1:61344600-61344619 | None:intergenic | 50.0% | |
| GAAGAGATTTACCGCGACGA+CGG | + | chr3_1:61344641-61344660 | Msa0366460:CDS | 50.0% | |
| AGATAGAAACTCCGTCGTCG+CGG | - | chr3_1:61344655-61344674 | None:intergenic | 50.0% | |
| ! | GAGTGCTTACTGTGCTGTTG+CGG | + | chr3_1:61344688-61344707 | Msa0366460:CDS | 50.0% |
| TTTCGGCGGTGAAGAGGATT+TGG | + | chr3_1:61344768-61344787 | Msa0366460:CDS | 50.0% | |
| TGAAGAGGATTTGGAGGGGA+AGG | + | chr3_1:61344777-61344796 | Msa0366460:CDS | 50.0% | |
| GAAGAGGATTTGGAGGGGAA+GGG | + | chr3_1:61344778-61344797 | Msa0366460:CDS | 50.0% | |
| ! | TGTCGGATGGGTTTGTACAG+TGG | + | chr3_1:61344822-61344841 | Msa0366460:CDS | 50.0% |
| ! | GTCGGATGGGTTTGTACAGT+GGG | + | chr3_1:61344823-61344842 | Msa0366460:CDS | 50.0% |
| ! | TCGGATGGGTTTGTACAGTG+GGG | + | chr3_1:61344824-61344843 | Msa0366460:CDS | 50.0% |
| ! | AGGAGATTGAAGGTGCGCTT+TGG | + | chr3_1:61344849-61344868 | Msa0366460:CDS | 50.0% |
| ! | GGAGATTGAAGGTGCGCTTT+GGG | + | chr3_1:61344850-61344869 | Msa0366460:CDS | 50.0% |
| !! | AAGGTGCGCTTTGGGATGTT+AGG | + | chr3_1:61344858-61344877 | Msa0366460:CDS | 50.0% |
| !! | AGGTGCGCTTTGGGATGTTA+GGG | + | chr3_1:61344859-61344878 | Msa0366460:CDS | 50.0% |
| !! | GCTTTGGGATGTTAGGGTTG+CGG | + | chr3_1:61344865-61344884 | Msa0366460:CDS | 50.0% |
| !! | GGTTGGTGGGGTTGAATACA+AGG | + | chr3_1:61344891-61344910 | Msa0366460:CDS | 50.0% |
| TGGTGGGGTTGAATACAAGG+AGG | + | chr3_1:61344894-61344913 | Msa0366460:CDS | 50.0% | |
| GGTGGGGTTGAATACAAGGA+GGG | + | chr3_1:61344895-61344914 | Msa0366460:CDS | 50.0% | |
| !! | GGTTTTTGAAGGAAGCGTGG+GGG | + | chr3_1:61344939-61344958 | Msa0366460:CDS | 50.0% |
| ! | GAAGGGGAATGGTTTGTGTC+CGG | + | chr3_1:61345003-61345022 | Msa0366460:CDS | 50.0% |
| ! | AAGGGGAATGGTTTGTGTCC+GGG | + | chr3_1:61345004-61345023 | Msa0366460:CDS | 50.0% |
| CTGAAGGGGGTGAAGATTTG+AGG | + | chr3_1:61345790-61345809 | Msa0366460:CDS | 50.0% | |
| ! | AAGCGTGATGGGACGTTAGA+AGG | + | chr3_1:61345813-61345832 | Msa0366460:CDS | 50.0% |
| TGATGGGACGTTAGAAGGTC+TGG | + | chr3_1:61345818-61345837 | Msa0366460:CDS | 50.0% | |
| GATGGGACGTTAGAAGGTCT+GGG | + | chr3_1:61345819-61345838 | Msa0366460:CDS | 50.0% | |
| GACGTTAGAAGGTCTGGGAA+AGG | + | chr3_1:61345824-61345843 | Msa0366460:CDS | 50.0% | |
| CAACAGTCCTGCAATGGGTA+GGG | - | chr3_1:61346571-61346590 | None:intergenic | 50.0% | |
| TGTGGCAACAGTCCTGCAAT+GGG | - | chr3_1:61346576-61346595 | None:intergenic | 50.0% | |
| ATGTGGCAACAGTCCTGCAA+TGG | - | chr3_1:61346577-61346596 | None:intergenic | 50.0% | |
| CAGAGAGTTTAACTCCCCTG+TGG | - | chr3_1:61346831-61346850 | None:intergenic | 50.0% | |
| CACAGGGGAGTTAAACTCTC+TGG | + | chr3_1:61346829-61346848 | Msa0366460:CDS | 50.0% | |
| GTGTGCAATGCATCAGGAAG+AGG | - | chr3_1:61346979-61346998 | None:intergenic | 50.0% | |
| !! | TCACTCTGCTTTTCACTGGC+TGG | - | chr3_1:61347051-61347070 | None:intergenic | 50.0% |
| ACAAGGAACAGAAGGCTCCT+TGG | - | chr3_1:61347145-61347164 | None:intergenic | 50.0% | |
| ! | TTGCCCGTCGCATTAAGTTG+GGG | - | chr3_1:61347227-61347246 | None:intergenic | 50.0% |
| CTTGCCCGTCGCATTAAGTT+GGG | - | chr3_1:61347228-61347247 | None:intergenic | 50.0% | |
| ACTTGCCCGTCGCATTAAGT+TGG | - | chr3_1:61347229-61347248 | None:intergenic | 50.0% | |
| !! | TGATGCTTGCTGTCTCTTGG+AGG | + | chr3_1:61347378-61347397 | Msa0366460:intron | 50.0% |
| TGACTGACTGCACTTGTGTG+CGG | + | chr3_1:61347498-61347517 | Msa0366460:intron | 50.0% | |
| TATGCCACCACCAGATGTAG+TGG | + | chr3_1:61347568-61347587 | Msa0366460:intron | 50.0% | |
| AATCCACAGGCCACTACATC+TGG | - | chr3_1:61347581-61347600 | None:intergenic | 50.0% | |
| CGCAACAAAGTCAGCCAAGA+AGG | + | chr3_1:61347792-61347811 | Msa0366460:CDS | 50.0% | |
| GAAGAAGAGACACTAAGGGC+TGG | + | chr3_1:61347839-61347858 | Msa0366460:CDS | 50.0% | |
| GCAGGTTTGGAGAAGGAAAC+TGG | + | chr3_1:61348018-61348037 | Msa0366460:intron | 50.0% | |
| GGTTTGGAGAAGGAAACTGG+AGG | + | chr3_1:61348021-61348040 | Msa0366460:intron | 50.0% | |
| ATTCCTAAAGTCTTGGCCCC+TGG | + | chr3_1:61349227-61349246 | Msa0366460:intron | 50.0% | |
| AGTGCAGATAGTGAGGTGTG+AGG | + | chr3_1:61349451-61349470 | Msa0366460:intron | 50.0% | |
| !! | ATGGACTTTGGGTTGCCAGT+TGG | - | chr3_1:61349478-61349497 | None:intergenic | 50.0% |
| CATTCTTGTCTCAAGGGCTC+AGG | + | chr3_1:61349535-61349554 | Msa0366460:intron | 50.0% | |
| !!! | GTATTTTACTGGTGGTGGGG+AGG | + | chr3_1:61350040-61350059 | Msa0366460:intron | 50.0% |
| AGTTGGGCGATTGGAACCTA+GGG | + | chr3_1:61350397-61350416 | Msa0366460:three_prime_UTR | 50.0% | |
| CGGAGAGTGGAAGTAGGGTT+AGG | - | chr3_1:61344517-61344536 | None:intergenic | 55.0% | |
| ! | TTTGAGACGTGAATCGGCGC+CGG | - | chr3_1:61344537-61344556 | None:intergenic | 55.0% |
| TTGAAGAACGCGGAGGAGGA+GGG | - | chr3_1:61344564-61344583 | None:intergenic | 55.0% | |
| TTTGAAGAACGCGGAGGAGG+AGG | - | chr3_1:61344565-61344584 | None:intergenic | 55.0% | |
| GGACGTGGGTTTGAAGAACG+CGG | - | chr3_1:61344574-61344593 | None:intergenic | 55.0% | |
| GATTGAAGCGGTGAGGACGT+GGG | - | chr3_1:61344588-61344607 | None:intergenic | 55.0% | |
| AGATTGAAGCGGTGAGGACG+TGG | - | chr3_1:61344589-61344608 | None:intergenic | 55.0% | |
| CTTCGGAGATTGAAGCGGTG+AGG | - | chr3_1:61344595-61344614 | None:intergenic | 55.0% | |
| TACTCACCAGACGGATCCTC+CGG | - | chr3_1:61344746-61344765 | None:intergenic | 55.0% | |
| GGCGGTGAAGAGGATTTGGA+GGG | + | chr3_1:61344772-61344791 | Msa0366460:CDS | 55.0% | |
| GCGGTGAAGAGGATTTGGAG+GGG | + | chr3_1:61344773-61344792 | Msa0366460:CDS | 55.0% | |
| ! | CGGATGGGTTTGTACAGTGG+GGG | + | chr3_1:61344825-61344844 | Msa0366460:CDS | 55.0% |
| ! | GGATGGGTTTGTACAGTGGG+GGG | + | chr3_1:61344826-61344845 | Msa0366460:CDS | 55.0% |
| TGTTAGGGTTGCGGAGAGGT+TGG | + | chr3_1:61344874-61344893 | Msa0366460:CDS | 55.0% | |
| ! | AAGGAAGCGTGGGGGAGTAT+GGG | + | chr3_1:61344947-61344966 | Msa0366460:CDS | 55.0% |
| GCGATGGTTTCGAAGGGGAA+TGG | + | chr3_1:61344992-61345011 | Msa0366460:CDS | 55.0% | |
| ! | GAATGGTTTGTGTCCGGGTC+CGG | + | chr3_1:61345009-61345028 | Msa0366460:CDS | 55.0% |
| ! | AATGGTTTGTGTCCGGGTCC+GGG | + | chr3_1:61345010-61345029 | Msa0366460:CDS | 55.0% |
| ATGCTGCTGAGGGGAGTAGA+AGG | + | chr3_1:61345047-61345066 | Msa0366460:CDS | 55.0% | |
| ! | TTGGAAGAGAATGGCTCGGG+TGG | + | chr3_1:61345142-61345161 | Msa0366460:CDS | 55.0% |
| ! | GAATGTCGAGGGGGCGTAAT+GGG | + | chr3_1:61345167-61345186 | Msa0366460:CDS | 55.0% |
| ! | GGGCGTAATGGGAGAGTAGA+AGG | + | chr3_1:61345178-61345197 | Msa0366460:CDS | 55.0% |
| GAAGCGAGAGTTCGCACTTC+TGG | + | chr3_1:61345948-61345967 | Msa0366460:CDS | 55.0% | |
| GCAACAGTCCTGCAATGGGT+AGG | - | chr3_1:61346572-61346591 | None:intergenic | 55.0% | |
| ! | TCTCTGGTGATGAGGAAGCG+AGG | + | chr3_1:61346845-61346864 | Msa0366460:CDS | 55.0% |
| GTCGCCCCAACTTAATGCGA+CGG | + | chr3_1:61347220-61347239 | Msa0366460:CDS | 55.0% | |
| TCGCCCCAACTTAATGCGAC+GGG | + | chr3_1:61347221-61347240 | Msa0366460:CDS | 55.0% | |
| CTAAAGTCTTGGCCCCTGGT+CGG | + | chr3_1:61349231-61349250 | Msa0366460:intron | 55.0% | |
| AGTGAGGTGTGAGGTCCAAC+TGG | + | chr3_1:61349460-61349479 | Msa0366460:intron | 55.0% | |
| GAGTTGGGCGATTGGAACCT+AGG | + | chr3_1:61350396-61350415 | Msa0366460:three_prime_UTR | 55.0% | |
| ! | GATCGGGGACGGTGGTGTTA+CGG | - | chr3_1:61344478-61344497 | None:intergenic | 60.0% |
| AATTAGGGGATCGGGGACGG+TGG | - | chr3_1:61344486-61344505 | None:intergenic | 60.0% | |
| GGGTTTGAAGAACGCGGAGG+AGG | - | chr3_1:61344568-61344587 | None:intergenic | 60.0% | |
| CGTGGGTTTGAAGAACGCGG+AGG | - | chr3_1:61344571-61344590 | None:intergenic | 60.0% | |
| AATTCGCCGGAGGATCCGTC+TGG | + | chr3_1:61344737-61344756 | Msa0366460:CDS | 60.0% | |
| CGGCGGTGAAGAGGATTTGG+AGG | + | chr3_1:61344771-61344790 | Msa0366460:CDS | 60.0% | |
| GGATTTGGAGGGGAAGGGAG+AGG | + | chr3_1:61344783-61344802 | Msa0366460:CDS | 60.0% | |
| TTTGGAGGGGAAGGGAGAGG+CGG | + | chr3_1:61344786-61344805 | Msa0366460:CDS | 60.0% | |
| TGGGTTTGTACAGTGGGGGG+AGG | + | chr3_1:61344829-61344848 | Msa0366460:CDS | 60.0% | |
| CAGTGGGGGGAGGAGATTGA+AGG | + | chr3_1:61344839-61344858 | Msa0366460:CDS | 60.0% | |
| GGGATGTTAGGGTTGCGGAG+AGG | + | chr3_1:61344870-61344889 | Msa0366460:CDS | 60.0% | |
| TAGGGTTGCGGAGAGGTTGG+TGG | + | chr3_1:61344877-61344896 | Msa0366460:CDS | 60.0% | |
| ! | AGGGTTGCGGAGAGGTTGGT+GGG | + | chr3_1:61344878-61344897 | Msa0366460:CDS | 60.0% |
| ! | GAAGGAAGCGTGGGGGAGTA+TGG | + | chr3_1:61344946-61344965 | Msa0366460:CDS | 60.0% |
| ! | AGGAAGCGTGGGGGAGTATG+GGG | + | chr3_1:61344948-61344967 | Msa0366460:CDS | 60.0% |
| TCACAAACACCTCCCGGACC+CGG | - | chr3_1:61345025-61345044 | None:intergenic | 60.0% | |
| ! | GAAGAGAATGGCTCGGGTGG+TGG | + | chr3_1:61345145-61345164 | Msa0366460:CDS | 60.0% |
| !! | CTCGGGTGGTGGAATGTCGA+GGG | + | chr3_1:61345156-61345175 | Msa0366460:CDS | 60.0% |
| !! | TCGGGTGGTGGAATGTCGAG+GGG | + | chr3_1:61345157-61345176 | Msa0366460:CDS | 60.0% |
| ! | GGAATGTCGAGGGGGCGTAA+TGG | + | chr3_1:61345166-61345185 | Msa0366460:CDS | 60.0% |
| CAGGCCACTACATCTGGTGG+TGG | - | chr3_1:61347575-61347594 | None:intergenic | 60.0% | |
| CCACAGGCCACTACATCTGG+TGG | - | chr3_1:61347578-61347597 | None:intergenic | 60.0% | |
| CCACCAGATGTAGTGGCCTG+TGG | + | chr3_1:61347575-61347594 | Msa0366460:intron | 60.0% | |
| CGACCAGGGGCCAAGACTTT+AGG | - | chr3_1:61349233-61349252 | None:intergenic | 60.0% | |
| !! | GGACGGTGGTGTTACGGAGG+AGG | - | chr3_1:61344472-61344491 | None:intergenic | 65.0% |
| ! | GGCGCCGGAGAGTGGAAGTA+GGG | - | chr3_1:61344522-61344541 | None:intergenic | 65.0% |
| TTGGAGGGGAAGGGAGAGGC+GGG | + | chr3_1:61344787-61344806 | Msa0366460:CDS | 65.0% | |
| !! | GGAGTGGGCTGGTGTCGGAT+GGG | + | chr3_1:61344810-61344829 | Msa0366460:CDS | 65.0% |
| !! | GGGTTGCGGAGAGGTTGGTG+GGG | + | chr3_1:61344879-61344898 | Msa0366460:CDS | 65.0% |
| ! | GGAAGCGTGGGGGAGTATGG+GGG | + | chr3_1:61344949-61344968 | Msa0366460:CDS | 65.0% |
| !! | GCTCGGGTGGTGGAATGTCG+AGG | + | chr3_1:61345155-61345174 | Msa0366460:CDS | 65.0% |
| !! | CGGGTGGTGGAATGTCGAGG+GGG | + | chr3_1:61345158-61345177 | Msa0366460:CDS | 65.0% |
| !! | CGGGGACGGTGGTGTTACGG+AGG | - | chr3_1:61344475-61344494 | None:intergenic | 70.0% |
| ! | CGGCGCCGGAGAGTGGAAGT+AGG | - | chr3_1:61344523-61344542 | None:intergenic | 70.0% |
| ! | CGTGAATCGGCGCCGGAGAG+TGG | - | chr3_1:61344530-61344549 | None:intergenic | 70.0% |
| TGGAGGGGAAGGGAGAGGCG+GGG | + | chr3_1:61344788-61344807 | Msa0366460:CDS | 70.0% | |
| GAAGGGAGAGGCGGGGGAGT+GGG | + | chr3_1:61344795-61344814 | Msa0366460:CDS | 70.0% | |
| !! | GGGAGTGGGCTGGTGTCGGA+TGG | + | chr3_1:61344809-61344828 | Msa0366460:CDS | 70.0% |
| GGTTTGTGTCCGGGTCCGGG+AGG | + | chr3_1:61345013-61345032 | Msa0366460:CDS | 70.0% | |
| GGAGGGGAAGGGAGAGGCGG+GGG | + | chr3_1:61344789-61344808 | Msa0366460:CDS | 75.0% | |
| GGAAGGGAGAGGCGGGGGAG+TGG | + | chr3_1:61344794-61344813 | Msa0366460:CDS | 75.0% | |
| !! | GCGGGGGAGTGGGCTGGTGT+CGG | + | chr3_1:61344805-61344824 | Msa0366460:CDS | 75.0% |
| ! | GGAGAGGCGGGGGAGTGGGC+TGG | + | chr3_1:61344799-61344818 | Msa0366460:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 61344377 | 61350528 | 61344377 | ID=Msa0366460;Name=Msa0366460 |
| chr3_1 | mRNA | 61344377 | 61350528 | 61344377 | ID=Msa0366460-mRNA-1;Parent=Msa0366460;Name=Msa0366460-mRNA-1;_AED=0.15;_eAED=0.15;_QI=57|0.6|0.83|1|1|1|6|309|643 |
| chr3_1 | exon | 61344377 | 61345394 | 61344377 | ID=Msa0366460-mRNA-1:exon:11859;Parent=Msa0366460-mRNA-1 |
| chr3_1 | exon | 61345775 | 61345984 | 61345775 | ID=Msa0366460-mRNA-1:exon:11860;Parent=Msa0366460-mRNA-1 |
| chr3_1 | exon | 61346773 | 61347266 | 61346773 | ID=Msa0366460-mRNA-1:exon:11861;Parent=Msa0366460-mRNA-1 |
| chr3_1 | exon | 61347767 | 61347870 | 61347767 | ID=Msa0366460-mRNA-1:exon:11862;Parent=Msa0366460-mRNA-1 |
| chr3_1 | exon | 61349408 | 61349465 | 61349408 | ID=Msa0366460-mRNA-1:exon:11863;Parent=Msa0366460-mRNA-1 |
| chr3_1 | exon | 61350115 | 61350528 | 61350115 | ID=Msa0366460-mRNA-1:exon:11864;Parent=Msa0366460-mRNA-1 |
| chr3_1 | five_prime_UTR | 61344377 | 61344433 | 61344377 | ID=Msa0366460-mRNA-1:five_prime_utr;Parent=Msa0366460-mRNA-1 |
| chr3_1 | CDS | 61344434 | 61345394 | 61344434 | ID=Msa0366460-mRNA-1:cds;Parent=Msa0366460-mRNA-1 |
| chr3_1 | CDS | 61345775 | 61345984 | 61345775 | ID=Msa0366460-mRNA-1:cds;Parent=Msa0366460-mRNA-1 |
| chr3_1 | CDS | 61346773 | 61347266 | 61346773 | ID=Msa0366460-mRNA-1:cds;Parent=Msa0366460-mRNA-1 |
| chr3_1 | CDS | 61347767 | 61347870 | 61347767 | ID=Msa0366460-mRNA-1:cds;Parent=Msa0366460-mRNA-1 |
| chr3_1 | CDS | 61349408 | 61349465 | 61349408 | ID=Msa0366460-mRNA-1:cds;Parent=Msa0366460-mRNA-1 |
| chr3_1 | CDS | 61350115 | 61350219 | 61350115 | ID=Msa0366460-mRNA-1:cds;Parent=Msa0366460-mRNA-1 |
| chr3_1 | three_prime_UTR | 61350220 | 61350528 | 61350220 | ID=Msa0366460-mRNA-1:three_prime_utr;Parent=Msa0366460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
