AlfalfaGEDB | Msa0575010

M. sativa cultivar zhongmu-4 / Msa0575010

KEGG: K03955
GO: GO:0000035 GO:0000036 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0005975 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009245 GO:0009247 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016053 GO:0019637 GO:0019752 GO:0019842 GO:0031177 GO:0031974 GO:0032787 GO:0033218 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0044620 GO:0046394 GO:0046467 GO:0046493 GO:0046872 GO:0046914 GO:0048037 GO:0050897 GO:0051192 GO:0070013 GO:0071704 GO:0072330 GO:0072341 GO:0090407 GO:0140104 GO:1901135 GO:1901137 GO:1901269 GO:1901271 GO:1901576 GO:1903509
PFAM: PF00550.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0575010	XP_003624206.1	73.267	101	25	1	122	220	30	130	3.02e-41	147
Msa0575010	XP_003624206.1	75.833	120	28	1	1	120	1	119	1.76e-56	186

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0575010	sp\|O80800\|ACPM2_ARATH	68.085	94	30	0	127	220	33	126	2.30e-38	132
Msa0575010	sp\|O80800\|ACPM2_ARATH	58.197	122	42	3	1	120	1	115	5.03e-38	131

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0575010	B7FLI7	73.267	101	25	1	122	220	30	130	1.44e-41	147
Msa0575010	B7FLI7	75.833	120	28	1	1	120	1	119	8.38e-57	186

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0102070	Msa0575010	0.804702	1.902986e-49	-8.615850e-47
Msa0220740	Msa0575010	0.803062	4.170486e-49	-8.615850e-47
Msa0366460	Msa0575010	0.816552	5.214217e-52	-8.615850e-47
Msa0407750	Msa0575010	0.806032	1.001816e-49	-8.615850e-47
Msa0444190	Msa0575010	0.806190	9.278188e-50	-8.615850e-47
Msa0240420	Msa0575010	0.842268	2.867831e-58	-8.615850e-47
Msa0303710	Msa0575010	0.801211	1.002158e-48	-8.615850e-47
Msa0360510	Msa0575010	0.802230	6.190231e-49	-8.615850e-47
Msa0575010	Msa0639610	0.838276	3.166692e-57	-8.615850e-47
Msa0575010	Msa0802830	0.801938	7.111297e-49	-8.615850e-47
Msa0575010	Msa0916690	0.806148	9.466872e-50	-8.615850e-47
Msa0575010	Msa0925190	0.832362	9.869342e-56	-8.615850e-47
Msa0575010	Msa1210220	0.805703	1.174445e-49	-8.615850e-47
Msa0575010	Msa1210940	0.804718	1.888389e-49	-8.615850e-47
Msa0575010	Msa1283330	0.801688	8.002478e-49	-8.615850e-47
Msa0575010	Msa1284680	0.801530	8.620853e-49	-8.615850e-47
Msa0575010	Msa1319800	0.828976	6.664454e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0575010	MtrunA17_Chr7g0249561	75.833	120	28	1	1	120	1	119	1.61e-60	186
Msa0575010	MtrunA17_Chr7g0249561	73.267	101	25	1	122	220	30	130	2.78e-45	147
Msa0575010	MtrunA17_Chr7g0249801	56.790	81	35	0	139	219	38	118	8.82e-26	97.1
Msa0575010	MtrunA17_Chr7g0249801	50.495	101	47	2	27	126	16	114	3.65e-22	87.4
Msa0575010	MtrunA17_Chr4g0076301	45.455	77	42	0	144	220	47	123	6.01e-16	71.6
Msa0575010	MtrunA17_Chr4g0076301	53.333	60	28	0	55	114	47	106	1.87e-14	67.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0575010	AT1G65290.1	68.085	94	30	0	127	220	33	126	2.34e-39	132
Msa0575010	AT1G65290.1	58.197	122	42	3	1	120	1	115	5.11e-39	131
Msa0575010	AT2G44620.1	51.852	81	39	0	139	219	41	121	3.13e-23	90.9
Msa0575010	AT2G44620.1	45.763	118	58	4	9	126	6	117	1.19e-21	86.7
Msa0575010	AT5G47630.1	41.026	78	46	0	143	220	50	127	1.15e-12	63.2
Msa0575010	AT5G47630.1	37.624	101	59	2	14	114	14	110	1.22e-12	63.2
Msa0575010	AT5G47630.2	41.026	78	46	0	143	220	50	127	1.15e-12	63.2
Msa0575010	AT5G47630.2	37.624	101	59	2	14	114	14	110	1.22e-12	63.2
Msa0575010	AT5G47630.3	41.026	78	46	0	143	220	50	127	1.15e-12	63.2
Msa0575010	AT5G47630.3	37.624	101	59	2	14	114	14	110	1.22e-12	63.2

Find 66 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTACGCTGCTTTATAATA+AGG	0.228040	4_1:+78803406	None:intergenic
GAAGCGACGAAGAGAGAAAT+TGG	0.280134	4_1:+78805343	None:intergenic
TGACAAAGTTGATCCTTCTA+AGG	0.306760	4_1:-78804158	Msa0575010:intron
TGACAAAGTTGATCCTTCTA+AGG	0.306760	4_1:-78805246	Msa0575010:intron
ATGGATCTTGATACAGAGTT+TGG	0.311699	4_1:-78803552	Msa0575010:CDS
ATGGATCTTGATACAGAGTT+TGG	0.311699	4_1:-78804427	Msa0575010:CDS
GGCGGGTCGGAGAAGCGGTT+TGG	0.336744	4_1:-78805441	Msa0575010:CDS
GCGGGTCGGAGAAGCGGTTT+GGG	0.346655	4_1:-78805440	Msa0575010:CDS
AAATTTACAGCTAGCCTCAT+AGG	0.359159	4_1:+78803436	None:intergenic
CTAAATCTCTGAAGTGTGTT+TGG	0.367201	4_1:-78803310	Msa0575010:three_prime_UTR
AAGCATCAACATGAACTCTT+AGG	0.374259	4_1:+78805405	None:intergenic
AACACACTTCAGAGATTTAG+AGG	0.378228	4_1:+78803313	None:intergenic
ATCTCTGAAGTGTGTTTGGC+TGG	0.401203	4_1:-78803306	Msa0575010:three_prime_UTR
ATTGAAGTGAAAACCTTAGA+AGG	0.402828	4_1:+78804145	None:intergenic
ATTGAAGTGAAAACCTTAGA+AGG	0.402828	4_1:+78805233	None:intergenic
GAAATCAACAGCTTGATTAA+CGG	0.409809	4_1:+78803491	None:intergenic
GAAATCAACAGCTTGATTAA+CGG	0.409809	4_1:+78804366	None:intergenic
AAGATCCATACAGATCTCTA+TGG	0.455038	4_1:+78803566	None:intergenic
AAGATCCATACAGATCTCTA+TGG	0.455038	4_1:+78804441	None:intergenic
TTTCTACGACGACCTTGGAT+TGG	0.465894	4_1:-78803601	Msa0575010:CDS
TTTCTACGACGACCTTGGAT+TGG	0.465894	4_1:-78804476	Msa0575010:CDS
GTCGCTTCAGCCAAGAGGTT+AGG	0.467143	4_1:-78805328	Msa0575010:CDS
GAAGAATGCGCAAAGGAGAT+TGG	0.473510	4_1:+78805366	None:intergenic
TTTCATTGCATCTCATCCTC+AGG	0.474149	4_1:-78803472	Msa0575010:CDS
CGTCGTAGAAATGAGCAGTT+GGG	0.474275	4_1:+78803613	None:intergenic
CGTCGTAGAAATGAGCAGTT+GGG	0.474275	4_1:+78804488	None:intergenic
TTCAGAGATTTAGAGGGGTG+TGG	0.496699	4_1:+78803320	None:intergenic
GCTCATTTCTACGACGACCT+TGG	0.506373	4_1:-78803606	Msa0575010:CDS
GCTCATTTCTACGACGACCT+TGG	0.506373	4_1:-78804481	Msa0575010:CDS
GAAAAGTTGTCCTAACCTCT+TGG	0.513436	4_1:+78805318	None:intergenic
ATATATCGATCAACAATGGC+GGG	0.521990	4_1:-78805458	Msa0575010:exon
AAGCGACGAAGAGAGAAATT+GGG	0.522280	4_1:+78805344	None:intergenic
CTCTGAAGTGTGTTTGGCTG+GGG	0.522655	4_1:-78803304	Msa0575010:three_prime_UTR
ACACAGTGAATGAACAATGA+AGG	0.534682	4_1:+78805515	None:intergenic
TCAGAGATTTAGAGGGGTGT+GGG	0.537945	4_1:+78803321	None:intergenic
TGGGGATGTGCCACCTTGAG+TGG	0.545053	4_1:-78803286	Msa0575010:three_prime_UTR
ATCGATCAACAATGGCGGGT+CGG	0.546544	4_1:-78805454	Msa0575010:exon
CAAAAGTAAAATACCACTCA+AGG	0.547331	4_1:+78803273	None:intergenic
AGATGCCATAGAGATCTGTA+TGG	0.557129	4_1:-78803571	Msa0575010:CDS
AGATGCCATAGAGATCTGTA+TGG	0.557129	4_1:-78804446	Msa0575010:CDS
TCTCTGAAGTGTGTTTGGCT+GGG	0.562594	4_1:-78803305	Msa0575010:three_prime_UTR
TCGTCGTAGAAATGAGCAGT+TGG	0.570386	4_1:+78803612	None:intergenic
TCGTCGTAGAAATGAGCAGT+TGG	0.570386	4_1:+78804487	None:intergenic
GCGAAGTAGTCAAACCTATG+AGG	0.572721	4_1:-78803450	Msa0575010:exon
CGCTGCTTTATAATAAGGAA+AGG	0.577658	4_1:+78803411	None:intergenic
CACAGTGAATGAACAATGAA+GGG	0.584067	4_1:+78805516	None:intergenic
ACAATGGCGGGTCGGAGAAG+CGG	0.584883	4_1:-78805446	Msa0575010:CDS
AGTTTAGAAGCAAACAAGCA+AGG	0.592842	4_1:+78803356	None:intergenic
ACACACTTCAGAGATTTAGA+GGG	0.597431	4_1:+78803314	None:intergenic
TTTATGATTATCGAATCTTG+AGG	0.598795	4_1:-78803183	Msa0575010:three_prime_UTR
ACTCTCTCTACTCGCACTCA+CGG	0.606622	4_1:+78805490	None:intergenic
CATCTAAACTATCCAATCCA+AGG	0.607628	4_1:+78803589	None:intergenic
CATCTAAACTATCCAATCCA+AGG	0.607628	4_1:+78804464	None:intergenic
TCTTCGTCGCTTCAGCCAAG+AGG	0.609459	4_1:-78805333	Msa0575010:CDS
GAGTGCGAGTAGAGAGAGTG+AGG	0.611038	4_1:-78805486	Msa0575010:five_prime_UTR
GAATGCGCAAAGGAGATTGG+TGG	0.622727	4_1:+78805369	None:intergenic
TATATATCGATCAACAATGG+CGG	0.622845	4_1:-78805459	Msa0575010:exon
AGGTTTGACTACTTCGCCTG+AGG	0.632082	4_1:+78803456	None:intergenic
CAACAGCTTGATTAACGGAG+AGG	0.651035	4_1:+78803496	None:intergenic
CAACAGCTTGATTAACGGAG+AGG	0.651035	4_1:+78804371	None:intergenic
GAGAAAAGTTCTCCTGACCA+AGG	0.668623	4_1:+78804228	None:intergenic
CACACTTCAGAGATTTAGAG+GGG	0.672454	4_1:+78803315	None:intergenic
AAATTGGGAAGAATGCGCAA+AGG	0.685653	4_1:+78805359	None:intergenic
AAGTAAAATACCACTCAAGG+TGG	0.706033	4_1:+78803276	None:intergenic
GTCGTAGAAATGAGCAGTTG+GGG	0.707088	4_1:+78803614	None:intergenic
GTCGTAGAAATGAGCAGTTG+GGG	0.707088	4_1:+78804489	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAAAATAAATGAAGAAATT+AGG	+	chr4_1:78803502-78803521	None:intergenic	15.0%
!!	GAAAATAAATGAAGAAATTA+GGG	+	chr4_1:78803501-78803520	None:intergenic	15.0%
!!	TGAAAATAAATGAAGAAATT+AGG	+	chr4_1:78803502-78803521	None:intergenic	15.0%
!!	AATATGACCTAAATAAATAT+TGG	+	chr4_1:78804630-78804649	None:intergenic	15.0%
!!	GAAATAAGTTTAAACATTTA+CGG	-	chr4_1:78804826-78804845	Msa0575010:intron	15.0%
!!!	TTTTAATTGACATGAAAAAT+AGG	+	chr4_1:78805492-78805511	None:intergenic	15.0%
!!	TGAAAATAAATGAAGAAATT+AGG	+	chr4_1:78803502-78803521	None:intergenic	15.0%
!!	GAAAATAAATGAAGAAATTA+GGG	+	chr4_1:78803501-78803520	None:intergenic	15.0%
!!	TGAAAATAAATGAAGAAATT+AGG	+	chr4_1:78803502-78803521	None:intergenic	15.0%
!!	AATATGACCTAAATAAATAT+TGG	+	chr4_1:78804630-78804649	None:intergenic	15.0%
!!	GAAATAAGTTTAAACATTTA+CGG	-	chr4_1:78804826-78804845	Msa0575010:intron	15.0%
!!!	TTTTAATTGACATGAAAAAT+AGG	+	chr4_1:78805492-78805511	None:intergenic	15.0%
!!!	TTTTATATATCGATCAACAA+TGG	-	chr4_1:78803241-78803260	Msa0575010:three_prime_UTR	20.0%
!!	TAAATGAAGAAATTAGGTTA+AGG	+	chr4_1:78803496-78803515	None:intergenic	20.0%
!!!	TTTCCAATCTTTCTTTATTT+AGG	-	chr4_1:78803541-78803560	Msa0575010:CDS	20.0%
!!	AAGATCAGTTTAAACATTTA+CGG	-	chr4_1:78803950-78803969	Msa0575010:intron	20.0%
!!	AACATAAGCCAAAAATATAA+TGG	+	chr4_1:78804149-78804168	None:intergenic	20.0%
!!	CAAAAAATGTCTTAAAATTG+TGG	+	chr4_1:78804455-78804474	None:intergenic	20.0%
!!	TCGATTTCCAATATTTATTT+AGG	-	chr4_1:78804620-78804639	Msa0575010:intron	20.0%
!!	AACATAAGCCAAAAATATAA+TGG	+	chr4_1:78804149-78804168	None:intergenic	20.0%
!!!	TTTTATATATCGATCAACAA+TGG	-	chr4_1:78803241-78803260	Msa0575010:three_prime_UTR	20.0%
!!	TAAATGAAGAAATTAGGTTA+AGG	+	chr4_1:78803496-78803515	None:intergenic	20.0%
!!!	TTTCCAATCTTTCTTTATTT+AGG	-	chr4_1:78803541-78803560	Msa0575010:CDS	20.0%
!!	AAGATCAGTTTAAACATTTA+CGG	-	chr4_1:78803950-78803969	Msa0575010:intron	20.0%
!!	AACATAAGCCAAAAATATAA+TGG	+	chr4_1:78804149-78804168	None:intergenic	20.0%
!!	CAAAAAATGTCTTAAAATTG+TGG	+	chr4_1:78804455-78804474	None:intergenic	20.0%
!!	TCGATTTCCAATATTTATTT+AGG	-	chr4_1:78804620-78804639	Msa0575010:intron	20.0%
!!	AACATAAGCCAAAAATATAA+TGG	+	chr4_1:78804149-78804168	None:intergenic	20.0%
!	TGACCTAAATAAAGAAAGAT+TGG	+	chr4_1:78803547-78803566	None:intergenic	25.0%
!	GTTTATCTAAGCTTATTTAC+TGG	+	chr4_1:78804031-78804050	None:intergenic	25.0%
!!!	TTTGTGTGCCATTATATTTT+TGG	-	chr4_1:78804138-78804157	Msa0575010:intron	25.0%
!!!	TTTTAAGACATTTTTTGCCT+TGG	-	chr4_1:78804458-78804477	Msa0575010:CDS	25.0%
!!!	CTTCACTTAGCTTTAAAAAA+CGG	+	chr4_1:78804683-78804702	None:intergenic	25.0%
!!!	TTAAGTTGTCTTTTCAAACA+TGG	+	chr4_1:78804728-78804747	None:intergenic	25.0%
!	GTTTATCAAAGCTTATTTAC+TGG	+	chr4_1:78804906-78804925	None:intergenic	25.0%
!!!	TTTGTGTGCCATTATATTTT+TGG	-	chr4_1:78804138-78804157	Msa0575010:intron	25.0%
!	CAAAAAATGTCTTAAAGTTG+TGG	+	chr4_1:78805327-78805346	None:intergenic	25.0%
!	TTTATGATTATCGAATCTTG+AGG	-	chr4_1:78805520-78805539	Msa0575010:five_prime_UTR	25.0%
!	TGACCTAAATAAAGAAAGAT+TGG	+	chr4_1:78803547-78803566	None:intergenic	25.0%
!	GTTTATCTAAGCTTATTTAC+TGG	+	chr4_1:78804031-78804050	None:intergenic	25.0%
!!!	TTTGTGTGCCATTATATTTT+TGG	-	chr4_1:78804138-78804157	Msa0575010:intron	25.0%
!!!	TTTTAAGACATTTTTTGCCT+TGG	-	chr4_1:78804458-78804477	Msa0575010:CDS	25.0%
!!!	CTTCACTTAGCTTTAAAAAA+CGG	+	chr4_1:78804683-78804702	None:intergenic	25.0%
!!!	TTAAGTTGTCTTTTCAAACA+TGG	+	chr4_1:78804728-78804747	None:intergenic	25.0%
!	GTTTATCAAAGCTTATTTAC+TGG	+	chr4_1:78804906-78804925	None:intergenic	25.0%
!!!	TTTGTGTGCCATTATATTTT+TGG	-	chr4_1:78804138-78804157	Msa0575010:intron	25.0%
!	CAAAAAATGTCTTAAAGTTG+TGG	+	chr4_1:78805327-78805346	None:intergenic	25.0%
!	TTTATGATTATCGAATCTTG+AGG	-	chr4_1:78805520-78805539	Msa0575010:five_prime_UTR	25.0%
	TATATATCGATCAACAATGG+CGG	-	chr4_1:78803244-78803263	Msa0575010:three_prime_UTR	30.0%
!	GACAACTTTTCTTGACAAAT+CGG	-	chr4_1:78803397-78803416	Msa0575010:three_prime_UTR	30.0%
!!!	TTTGTCAAATTTTTTGACGC+AGG	+	chr4_1:78803444-78803463	None:intergenic	30.0%
	ATTGAAGTGAAAACCTTAGA+AGG	+	chr4_1:78803473-78803492	None:intergenic	30.0%
	AGCAATGTTAAAAAAAGGTC+GGG	+	chr4_1:78803586-78803605	None:intergenic	30.0%
	CAGCAATGTTAAAAAAAGGT+CGG	+	chr4_1:78803587-78803606	None:intergenic	30.0%
	TACTTAGCTTCATACAAGAT+TGG	+	chr4_1:78803638-78803657	None:intergenic	30.0%
	CTTGTATGAAGCTAAGTATA+AGG	-	chr4_1:78803640-78803659	Msa0575010:intron	30.0%
	ACTGTGTACAATATACCAAA+CGG	-	chr4_1:78803722-78803741	Msa0575010:intron	30.0%
!	TTAAGTTGTCTTTCCAAACA+TGG	+	chr4_1:78803825-78803844	None:intergenic	30.0%
!	TAGTCAAACTGTTTTCATGT+AGG	-	chr4_1:78803887-78803906	Msa0575010:intron	30.0%
!!!	TTAATGTGCTTGTGTCATTT+TGG	-	chr4_1:78804091-78804110	Msa0575010:intron	30.0%
!	ATCTTGTCTACTTCATTTTC+AGG	+	chr4_1:78804312-78804331	None:intergenic	30.0%
	GAAATCAACAGCTTGATTAA+CGG	+	chr4_1:78804340-78804359	None:intergenic	30.0%
!	CGCTGCTTTATAATAAAGAA+AGG	+	chr4_1:78804423-78804442	None:intergenic	30.0%
!	GAGAACTTTTCTCGATAAAT+CGG	-	chr4_1:78804485-78804504	Msa0575010:CDS	30.0%
!!!	TTTGTCAAATTTTTTGACGC+AGG	+	chr4_1:78803444-78803463	None:intergenic	30.0%
	ATTGAAGTGAAAACCTTAGA+AGG	+	chr4_1:78803473-78803492	None:intergenic	30.0%
!	ATCTTGTCTACTTCATTTTC+AGG	+	chr4_1:78804312-78804331	None:intergenic	30.0%
	GAAATCAACAGCTTGATTAA+CGG	+	chr4_1:78804340-78804359	None:intergenic	30.0%
!	TTCTACGCTGCTTTATAATA+AGG	+	chr4_1:78804428-78804447	None:intergenic	30.0%
	CAAAAGTAAAATACCACTCA+AGG	+	chr4_1:78805433-78805452	None:intergenic	30.0%
!	CTTGAGTGGTATTTTACTTT+TGG	-	chr4_1:78805431-78805450	Msa0575010:CDS	30.0%
	TATATATCGATCAACAATGG+CGG	-	chr4_1:78803244-78803263	Msa0575010:three_prime_UTR	30.0%
!	GACAACTTTTCTTGACAAAT+CGG	-	chr4_1:78803397-78803416	Msa0575010:three_prime_UTR	30.0%
!!!	TTTGTCAAATTTTTTGACGC+AGG	+	chr4_1:78803444-78803463	None:intergenic	30.0%
	ATTGAAGTGAAAACCTTAGA+AGG	+	chr4_1:78803473-78803492	None:intergenic	30.0%
	AGCAATGTTAAAAAAAGGTC+GGG	+	chr4_1:78803586-78803605	None:intergenic	30.0%
	CAGCAATGTTAAAAAAAGGT+CGG	+	chr4_1:78803587-78803606	None:intergenic	30.0%
	TACTTAGCTTCATACAAGAT+TGG	+	chr4_1:78803638-78803657	None:intergenic	30.0%
	CTTGTATGAAGCTAAGTATA+AGG	-	chr4_1:78803640-78803659	Msa0575010:intron	30.0%
	ACTGTGTACAATATACCAAA+CGG	-	chr4_1:78803722-78803741	Msa0575010:intron	30.0%
!	TTAAGTTGTCTTTCCAAACA+TGG	+	chr4_1:78803825-78803844	None:intergenic	30.0%
!	TAGTCAAACTGTTTTCATGT+AGG	-	chr4_1:78803887-78803906	Msa0575010:intron	30.0%
!!!	TTAATGTGCTTGTGTCATTT+TGG	-	chr4_1:78804091-78804110	Msa0575010:intron	30.0%
!	ATCTTGTCTACTTCATTTTC+AGG	+	chr4_1:78804312-78804331	None:intergenic	30.0%
	GAAATCAACAGCTTGATTAA+CGG	+	chr4_1:78804340-78804359	None:intergenic	30.0%
!	CGCTGCTTTATAATAAAGAA+AGG	+	chr4_1:78804423-78804442	None:intergenic	30.0%
!	GAGAACTTTTCTCGATAAAT+CGG	-	chr4_1:78804485-78804504	Msa0575010:CDS	30.0%
!!!	TTTGTCAAATTTTTTGACGC+AGG	+	chr4_1:78803444-78803463	None:intergenic	30.0%
	ATTGAAGTGAAAACCTTAGA+AGG	+	chr4_1:78803473-78803492	None:intergenic	30.0%
!	ATCTTGTCTACTTCATTTTC+AGG	+	chr4_1:78804312-78804331	None:intergenic	30.0%
	GAAATCAACAGCTTGATTAA+CGG	+	chr4_1:78804340-78804359	None:intergenic	30.0%
!	TTCTACGCTGCTTTATAATA+AGG	+	chr4_1:78804428-78804447	None:intergenic	30.0%
	CAAAAGTAAAATACCACTCA+AGG	+	chr4_1:78805433-78805452	None:intergenic	30.0%
!	CTTGAGTGGTATTTTACTTT+TGG	-	chr4_1:78805431-78805450	Msa0575010:CDS	30.0%
	CACAGTGAATGAACAATGAA+GGG	+	chr4_1:78803190-78803209	None:intergenic	35.0%
	ACACAGTGAATGAACAATGA+AGG	+	chr4_1:78803191-78803210	None:intergenic	35.0%
	ATATATCGATCAACAATGGC+GGG	-	chr4_1:78803245-78803264	Msa0575010:three_prime_UTR	35.0%
	AAGCATCAACATGAACTCTT+AGG	+	chr4_1:78803301-78803320	None:intergenic	35.0%
!	AACTTTTCTTGACAAATCGG+AGG	-	chr4_1:78803400-78803419	Msa0575010:three_prime_UTR	35.0%
!	TGACAAAGTTGATCCTTCTA+AGG	-	chr4_1:78803457-78803476	Msa0575010:exon	35.0%
	GCAATGTTAAAAAAAGGTCG+GGG	+	chr4_1:78803585-78803604	None:intergenic	35.0%
	TGCGCAGCAATGTTAAAAAA+AGG	+	chr4_1:78803591-78803610	None:intergenic	35.0%
!!	AGGTTCTAGTCTTGGAAATA+GGG	-	chr4_1:78803695-78803714	Msa0575010:intron	35.0%
!	GCTAAGAGAAGACTGTATTT+TGG	-	chr4_1:78803789-78803808	Msa0575010:intron	35.0%
!!	AAGAGAAGACTGTATTTTGG+AGG	-	chr4_1:78803792-78803811	Msa0575010:intron	35.0%
	TGATCTTCATAAGCTATCCT+AGG	+	chr4_1:78803937-78803956	None:intergenic	35.0%
	ATATAATGGCACACAAATGC+TGG	+	chr4_1:78804135-78804154	None:intergenic	35.0%
	CATCTAAACTATCCAATCCA+AGG	+	chr4_1:78804242-78804261	None:intergenic	35.0%
	AAGATCCATACAGATCTCTA+TGG	+	chr4_1:78804265-78804284	None:intergenic	35.0%
	ATGGATCTTGATACAGAGTT+TGG	-	chr4_1:78804276-78804295	Msa0575010:intron	35.0%
!	AAATTTACAGCTAGCCTCAT+AGG	+	chr4_1:78804398-78804417	None:intergenic	35.0%
!	AACTTTTCTCGATAAATCGG+AGG	-	chr4_1:78804488-78804507	Msa0575010:CDS	35.0%
!	TGACAAAGTTGATCCTTCTA+AGG	-	chr4_1:78803457-78803476	Msa0575010:exon	35.0%
	GGATAGCTTATGAAAACAGT+TGG	+	chr4_1:78804794-78804813	None:intergenic	35.0%
!	CTGTTTTCATAAGCTATCCT+AGG	-	chr4_1:78804795-78804814	Msa0575010:intron	35.0%
	ACTTATTTCCATAAGCTCCT+AGG	+	chr4_1:78804815-78804834	None:intergenic	35.0%
!!!	TTAATGTGCTTGTGTCGTTT+TGG	-	chr4_1:78804966-78804985	Msa0575010:intron	35.0%
	ATATAATGGCACACAAATGC+TGG	+	chr4_1:78804135-78804154	None:intergenic	35.0%
!	TGACAAAAGCAAAGAAGCAT+AGG	+	chr4_1:78805064-78805083	None:intergenic	35.0%
!!	TATGCTTCTTTGCTTTTGTC+AGG	-	chr4_1:78805063-78805082	Msa0575010:intron	35.0%
	CATCTAAACTATCCAATCCA+AGG	+	chr4_1:78804242-78804261	None:intergenic	35.0%
	AAGATCCATACAGATCTCTA+TGG	+	chr4_1:78804265-78804284	None:intergenic	35.0%
	ATGGATCTTGATACAGAGTT+TGG	-	chr4_1:78804276-78804295	Msa0575010:intron	35.0%
!	AAATTTACAGCTAGCCTCAT+AGG	+	chr4_1:78804398-78804417	None:intergenic	35.0%
!	CGCTGCTTTATAATAAGGAA+AGG	+	chr4_1:78805295-78805314	None:intergenic	35.0%
	AGTTTAGAAGCAAACAAGCA+AGG	+	chr4_1:78805350-78805369	None:intergenic	35.0%
	ACACACTTCAGAGATTTAGA+GGG	+	chr4_1:78805392-78805411	None:intergenic	35.0%
	AACACACTTCAGAGATTTAG+AGG	+	chr4_1:78805393-78805412	None:intergenic	35.0%
!!	CTAAATCTCTGAAGTGTGTT+TGG	-	chr4_1:78805393-78805412	Msa0575010:CDS	35.0%
	AAGTAAAATACCACTCAAGG+TGG	+	chr4_1:78805430-78805449	None:intergenic	35.0%
	CACAGTGAATGAACAATGAA+GGG	+	chr4_1:78803190-78803209	None:intergenic	35.0%
	ACACAGTGAATGAACAATGA+AGG	+	chr4_1:78803191-78803210	None:intergenic	35.0%
	ATATATCGATCAACAATGGC+GGG	-	chr4_1:78803245-78803264	Msa0575010:three_prime_UTR	35.0%
	AAGCATCAACATGAACTCTT+AGG	+	chr4_1:78803301-78803320	None:intergenic	35.0%
!	AACTTTTCTTGACAAATCGG+AGG	-	chr4_1:78803400-78803419	Msa0575010:three_prime_UTR	35.0%
!	TGACAAAGTTGATCCTTCTA+AGG	-	chr4_1:78803457-78803476	Msa0575010:exon	35.0%
	GCAATGTTAAAAAAAGGTCG+GGG	+	chr4_1:78803585-78803604	None:intergenic	35.0%
	TGCGCAGCAATGTTAAAAAA+AGG	+	chr4_1:78803591-78803610	None:intergenic	35.0%
!!	AGGTTCTAGTCTTGGAAATA+GGG	-	chr4_1:78803695-78803714	Msa0575010:intron	35.0%
!	GCTAAGAGAAGACTGTATTT+TGG	-	chr4_1:78803789-78803808	Msa0575010:intron	35.0%
!!	AAGAGAAGACTGTATTTTGG+AGG	-	chr4_1:78803792-78803811	Msa0575010:intron	35.0%
	TGATCTTCATAAGCTATCCT+AGG	+	chr4_1:78803937-78803956	None:intergenic	35.0%
	ATATAATGGCACACAAATGC+TGG	+	chr4_1:78804135-78804154	None:intergenic	35.0%
	CATCTAAACTATCCAATCCA+AGG	+	chr4_1:78804242-78804261	None:intergenic	35.0%
	AAGATCCATACAGATCTCTA+TGG	+	chr4_1:78804265-78804284	None:intergenic	35.0%
	ATGGATCTTGATACAGAGTT+TGG	-	chr4_1:78804276-78804295	Msa0575010:intron	35.0%
!	AAATTTACAGCTAGCCTCAT+AGG	+	chr4_1:78804398-78804417	None:intergenic	35.0%
!	AACTTTTCTCGATAAATCGG+AGG	-	chr4_1:78804488-78804507	Msa0575010:CDS	35.0%
!	TGACAAAGTTGATCCTTCTA+AGG	-	chr4_1:78803457-78803476	Msa0575010:exon	35.0%
	GGATAGCTTATGAAAACAGT+TGG	+	chr4_1:78804794-78804813	None:intergenic	35.0%
!	CTGTTTTCATAAGCTATCCT+AGG	-	chr4_1:78804795-78804814	Msa0575010:intron	35.0%
	ACTTATTTCCATAAGCTCCT+AGG	+	chr4_1:78804815-78804834	None:intergenic	35.0%
!!!	TTAATGTGCTTGTGTCGTTT+TGG	-	chr4_1:78804966-78804985	Msa0575010:intron	35.0%
	ATATAATGGCACACAAATGC+TGG	+	chr4_1:78804135-78804154	None:intergenic	35.0%
!	TGACAAAAGCAAAGAAGCAT+AGG	+	chr4_1:78805064-78805083	None:intergenic	35.0%
!!	TATGCTTCTTTGCTTTTGTC+AGG	-	chr4_1:78805063-78805082	Msa0575010:intron	35.0%
	CATCTAAACTATCCAATCCA+AGG	+	chr4_1:78804242-78804261	None:intergenic	35.0%
	AAGATCCATACAGATCTCTA+TGG	+	chr4_1:78804265-78804284	None:intergenic	35.0%
	ATGGATCTTGATACAGAGTT+TGG	-	chr4_1:78804276-78804295	Msa0575010:intron	35.0%
!	AAATTTACAGCTAGCCTCAT+AGG	+	chr4_1:78804398-78804417	None:intergenic	35.0%
!	CGCTGCTTTATAATAAGGAA+AGG	+	chr4_1:78805295-78805314	None:intergenic	35.0%
	AGTTTAGAAGCAAACAAGCA+AGG	+	chr4_1:78805350-78805369	None:intergenic	35.0%
	ACACACTTCAGAGATTTAGA+GGG	+	chr4_1:78805392-78805411	None:intergenic	35.0%
	AACACACTTCAGAGATTTAG+AGG	+	chr4_1:78805393-78805412	None:intergenic	35.0%
!!	CTAAATCTCTGAAGTGTGTT+TGG	-	chr4_1:78805393-78805412	Msa0575010:CDS	35.0%
	AAGTAAAATACCACTCAAGG+TGG	+	chr4_1:78805430-78805449	None:intergenic	35.0%
	AAATTGGGAAGAATGCGCAA+AGG	+	chr4_1:78803347-78803366	None:intergenic	40.0%
	AAGCGACGAAGAGAGAAATT+GGG	+	chr4_1:78803362-78803381	None:intergenic	40.0%
	GAAAAGTTGTCCTAACCTCT+TGG	+	chr4_1:78803388-78803407	None:intergenic	40.0%
!!	CAGGTTCTAGTCTTGGAAAT+AGG	-	chr4_1:78803694-78803713	Msa0575010:intron	40.0%
	TGGAGGATTAAGACCATGTT+TGG	-	chr4_1:78803809-78803828	Msa0575010:intron	40.0%
	CTGTCTTCATAAGCTATCCT+AGG	-	chr4_1:78803917-78803936	Msa0575010:intron	40.0%
	TAAAGTGCAAGTCTACACTG+AGG	+	chr4_1:78804067-78804086	None:intergenic	40.0%
!	TGACAAAAGCAAAGAAGCAC+AGG	+	chr4_1:78804189-78804208	None:intergenic	40.0%
!!	TGTGCTTCTTTGCTTTTGTC+AGG	-	chr4_1:78804188-78804207	Msa0575010:CDS	40.0%
	AGATGCCATAGAGATCTGTA+TGG	-	chr4_1:78804257-78804276	Msa0575010:CDS	40.0%
	CATTGCATCTCATCATCCTT+AGG	-	chr4_1:78804359-78804378	Msa0575010:intron	40.0%
!!!	AGACATTTTTTGCCTTGGTC+AGG	-	chr4_1:78804463-78804482	Msa0575010:CDS	40.0%
	TAAAAAACGGCGATGCAAGA+AGG	+	chr4_1:78804670-78804689	None:intergenic	40.0%
	GCTAAGTGAAGACTGTACTT+TGG	-	chr4_1:78804692-78804711	Msa0575010:intron	40.0%
	AAGTGAAGACTGTACTTTGG+AGG	-	chr4_1:78804695-78804714	Msa0575010:intron	40.0%
	TAAGCTATCCTAGGAGCTTA+TGG	-	chr4_1:78804804-78804823	Msa0575010:intron	40.0%
	TAAAGTGCAAGTCTAGACTG+AGG	+	chr4_1:78804942-78804961	None:intergenic	40.0%
	AGATGCCATAGAGATCTGTA+TGG	-	chr4_1:78804257-78804276	Msa0575010:CDS	40.0%
	TTTCATTGCATCTCATCCTC+AGG	-	chr4_1:78805231-78805250	Msa0575010:intron	40.0%
	CACACTTCAGAGATTTAGAG+GGG	+	chr4_1:78805391-78805410	None:intergenic	40.0%
	AAATTGGGAAGAATGCGCAA+AGG	+	chr4_1:78803347-78803366	None:intergenic	40.0%
	AAGCGACGAAGAGAGAAATT+GGG	+	chr4_1:78803362-78803381	None:intergenic	40.0%
	GAAAAGTTGTCCTAACCTCT+TGG	+	chr4_1:78803388-78803407	None:intergenic	40.0%
!!	CAGGTTCTAGTCTTGGAAAT+AGG	-	chr4_1:78803694-78803713	Msa0575010:intron	40.0%
	TGGAGGATTAAGACCATGTT+TGG	-	chr4_1:78803809-78803828	Msa0575010:intron	40.0%
	CTGTCTTCATAAGCTATCCT+AGG	-	chr4_1:78803917-78803936	Msa0575010:intron	40.0%
	TAAAGTGCAAGTCTACACTG+AGG	+	chr4_1:78804067-78804086	None:intergenic	40.0%
!	TGACAAAAGCAAAGAAGCAC+AGG	+	chr4_1:78804189-78804208	None:intergenic	40.0%
!!	TGTGCTTCTTTGCTTTTGTC+AGG	-	chr4_1:78804188-78804207	Msa0575010:CDS	40.0%
	AGATGCCATAGAGATCTGTA+TGG	-	chr4_1:78804257-78804276	Msa0575010:CDS	40.0%
	CATTGCATCTCATCATCCTT+AGG	-	chr4_1:78804359-78804378	Msa0575010:intron	40.0%
!!!	AGACATTTTTTGCCTTGGTC+AGG	-	chr4_1:78804463-78804482	Msa0575010:CDS	40.0%
	TAAAAAACGGCGATGCAAGA+AGG	+	chr4_1:78804670-78804689	None:intergenic	40.0%
	GCTAAGTGAAGACTGTACTT+TGG	-	chr4_1:78804692-78804711	Msa0575010:intron	40.0%
	AAGTGAAGACTGTACTTTGG+AGG	-	chr4_1:78804695-78804714	Msa0575010:intron	40.0%
	TAAGCTATCCTAGGAGCTTA+TGG	-	chr4_1:78804804-78804823	Msa0575010:intron	40.0%
	TAAAGTGCAAGTCTAGACTG+AGG	+	chr4_1:78804942-78804961	None:intergenic	40.0%
	AGATGCCATAGAGATCTGTA+TGG	-	chr4_1:78804257-78804276	Msa0575010:CDS	40.0%
	TTTCATTGCATCTCATCCTC+AGG	-	chr4_1:78805231-78805250	Msa0575010:intron	40.0%
	CACACTTCAGAGATTTAGAG+GGG	+	chr4_1:78805391-78805410	None:intergenic	40.0%
	GAAGAATGCGCAAAGGAGAT+TGG	+	chr4_1:78803340-78803359	None:intergenic	45.0%
	GAAGCGACGAAGAGAGAAAT+TGG	+	chr4_1:78803363-78803382	None:intergenic	45.0%
	GACTAGAACCTGTGACCTTT+CGG	+	chr4_1:78803686-78803705	None:intergenic	45.0%
!	AAGGTCACAGGTTCTAGTCT+TGG	-	chr4_1:78803687-78803706	Msa0575010:intron	45.0%
	GTCGTAGAAATGAGCAGTTG+GGG	+	chr4_1:78804217-78804236	None:intergenic	45.0%
	CGTCGTAGAAATGAGCAGTT+GGG	+	chr4_1:78804218-78804237	None:intergenic	45.0%
	TCGTCGTAGAAATGAGCAGT+TGG	+	chr4_1:78804219-78804238	None:intergenic	45.0%
	TTTCTACGACGACCTTGGAT+TGG	-	chr4_1:78804227-78804246	Msa0575010:CDS	45.0%
	CAACAGCTTGATTAACGGAG+AGG	+	chr4_1:78804335-78804354	None:intergenic	45.0%
	AGGTTTGACTACTTCGCCTA+AGG	+	chr4_1:78804378-78804397	None:intergenic	45.0%
	GCGAAGTAGTCAAACCTATG+AGG	-	chr4_1:78804381-78804400	Msa0575010:CDS	45.0%
	GAGAAAAGTTCTCCTGACCA+AGG	+	chr4_1:78804478-78804497	None:intergenic	45.0%
	GTCGTAGAAATGAGCAGTTG+GGG	+	chr4_1:78804217-78804236	None:intergenic	45.0%
	CGTCGTAGAAATGAGCAGTT+GGG	+	chr4_1:78804218-78804237	None:intergenic	45.0%
	TCGTCGTAGAAATGAGCAGT+TGG	+	chr4_1:78804219-78804238	None:intergenic	45.0%
	TTTCTACGACGACCTTGGAT+TGG	-	chr4_1:78804227-78804246	Msa0575010:CDS	45.0%
	CAACAGCTTGATTAACGGAG+AGG	+	chr4_1:78804335-78804354	None:intergenic	45.0%
	GCGAAGTAGTCAAACCTATG+AGG	-	chr4_1:78804381-78804400	Msa0575010:CDS	45.0%
!	TCAGAGATTTAGAGGGGTGT+GGG	+	chr4_1:78805385-78805404	None:intergenic	45.0%
	TTCAGAGATTTAGAGGGGTG+TGG	+	chr4_1:78805386-78805405	None:intergenic	45.0%
!!	ATCTCTGAAGTGTGTTTGGC+TGG	-	chr4_1:78805397-78805416	Msa0575010:CDS	45.0%
!!	TCTCTGAAGTGTGTTTGGCT+GGG	-	chr4_1:78805398-78805417	Msa0575010:CDS	45.0%
	GAAGAATGCGCAAAGGAGAT+TGG	+	chr4_1:78803340-78803359	None:intergenic	45.0%
	GAAGCGACGAAGAGAGAAAT+TGG	+	chr4_1:78803363-78803382	None:intergenic	45.0%
	GACTAGAACCTGTGACCTTT+CGG	+	chr4_1:78803686-78803705	None:intergenic	45.0%
!	AAGGTCACAGGTTCTAGTCT+TGG	-	chr4_1:78803687-78803706	Msa0575010:intron	45.0%
	GTCGTAGAAATGAGCAGTTG+GGG	+	chr4_1:78804217-78804236	None:intergenic	45.0%
	CGTCGTAGAAATGAGCAGTT+GGG	+	chr4_1:78804218-78804237	None:intergenic	45.0%
	TCGTCGTAGAAATGAGCAGT+TGG	+	chr4_1:78804219-78804238	None:intergenic	45.0%
	TTTCTACGACGACCTTGGAT+TGG	-	chr4_1:78804227-78804246	Msa0575010:CDS	45.0%
	CAACAGCTTGATTAACGGAG+AGG	+	chr4_1:78804335-78804354	None:intergenic	45.0%
	AGGTTTGACTACTTCGCCTA+AGG	+	chr4_1:78804378-78804397	None:intergenic	45.0%
	GCGAAGTAGTCAAACCTATG+AGG	-	chr4_1:78804381-78804400	Msa0575010:CDS	45.0%
	GAGAAAAGTTCTCCTGACCA+AGG	+	chr4_1:78804478-78804497	None:intergenic	45.0%
	GTCGTAGAAATGAGCAGTTG+GGG	+	chr4_1:78804217-78804236	None:intergenic	45.0%
	CGTCGTAGAAATGAGCAGTT+GGG	+	chr4_1:78804218-78804237	None:intergenic	45.0%
	TCGTCGTAGAAATGAGCAGT+TGG	+	chr4_1:78804219-78804238	None:intergenic	45.0%
	TTTCTACGACGACCTTGGAT+TGG	-	chr4_1:78804227-78804246	Msa0575010:CDS	45.0%
	CAACAGCTTGATTAACGGAG+AGG	+	chr4_1:78804335-78804354	None:intergenic	45.0%
	GCGAAGTAGTCAAACCTATG+AGG	-	chr4_1:78804381-78804400	Msa0575010:CDS	45.0%
!	TCAGAGATTTAGAGGGGTGT+GGG	+	chr4_1:78805385-78805404	None:intergenic	45.0%
	TTCAGAGATTTAGAGGGGTG+TGG	+	chr4_1:78805386-78805405	None:intergenic	45.0%
!!	ATCTCTGAAGTGTGTTTGGC+TGG	-	chr4_1:78805397-78805416	Msa0575010:CDS	45.0%
!!	TCTCTGAAGTGTGTTTGGCT+GGG	-	chr4_1:78805398-78805417	Msa0575010:CDS	45.0%
	ACTCTCTCTACTCGCACTCA+CGG	+	chr4_1:78803216-78803235	None:intergenic	50.0%
!!	ATCGATCAACAATGGCGGGT+CGG	-	chr4_1:78803249-78803268	Msa0575010:three_prime_UTR	50.0%
	GAATGCGCAAAGGAGATTGG+TGG	+	chr4_1:78803337-78803356	None:intergenic	50.0%
	GTTGTTGTCACGTGACCGAA+AGG	-	chr4_1:78803668-78803687	Msa0575010:intron	50.0%
	GTCTACACTGAGGCTCTGTT+TGG	+	chr4_1:78804057-78804076	None:intergenic	50.0%
	GCTCATTTCTACGACGACCT+TGG	-	chr4_1:78804222-78804241	Msa0575010:CDS	50.0%
	GTCTAGACTGAGGCTCTGTT+TGG	+	chr4_1:78804932-78804951	None:intergenic	50.0%
	GCTCATTTCTACGACGACCT+TGG	-	chr4_1:78804222-78804241	Msa0575010:CDS	50.0%
	AGGTTTGACTACTTCGCCTG+AGG	+	chr4_1:78805250-78805269	None:intergenic	50.0%
!!	CTCTGAAGTGTGTTTGGCTG+GGG	-	chr4_1:78805399-78805418	Msa0575010:CDS	50.0%
	ACTCTCTCTACTCGCACTCA+CGG	+	chr4_1:78803216-78803235	None:intergenic	50.0%
!!	ATCGATCAACAATGGCGGGT+CGG	-	chr4_1:78803249-78803268	Msa0575010:three_prime_UTR	50.0%
	GAATGCGCAAAGGAGATTGG+TGG	+	chr4_1:78803337-78803356	None:intergenic	50.0%
	GTTGTTGTCACGTGACCGAA+AGG	-	chr4_1:78803668-78803687	Msa0575010:intron	50.0%
	GTCTACACTGAGGCTCTGTT+TGG	+	chr4_1:78804057-78804076	None:intergenic	50.0%
	GCTCATTTCTACGACGACCT+TGG	-	chr4_1:78804222-78804241	Msa0575010:CDS	50.0%
	GTCTAGACTGAGGCTCTGTT+TGG	+	chr4_1:78804932-78804951	None:intergenic	50.0%
	GCTCATTTCTACGACGACCT+TGG	-	chr4_1:78804222-78804241	Msa0575010:CDS	50.0%
	AGGTTTGACTACTTCGCCTG+AGG	+	chr4_1:78805250-78805269	None:intergenic	50.0%
!!	CTCTGAAGTGTGTTTGGCTG+GGG	-	chr4_1:78805399-78805418	Msa0575010:CDS	50.0%
	GAGTGCGAGTAGAGAGAGTG+AGG	-	chr4_1:78803217-78803236	Msa0575010:three_prime_UTR	55.0%
	TCTTCGTCGCTTCAGCCAAG+AGG	-	chr4_1:78803370-78803389	Msa0575010:three_prime_UTR	55.0%
	GTCGCTTCAGCCAAGAGGTT+AGG	-	chr4_1:78803375-78803394	Msa0575010:three_prime_UTR	55.0%
	TCACGTGACCGAAAGGTCAC+AGG	-	chr4_1:78803675-78803694	Msa0575010:intron	55.0%
	AGCTACTGCATCGCACCGTT+TGG	+	chr4_1:78803740-78803759	None:intergenic	55.0%
	GGCACACAAATGCTGGCAGA+GGG	+	chr4_1:78804128-78804147	None:intergenic	55.0%
	TGGCACACAAATGCTGGCAG+AGG	+	chr4_1:78804129-78804148	None:intergenic	55.0%
	ACGGCGATGCAAGAAGGTTG+AGG	+	chr4_1:78804664-78804683	None:intergenic	55.0%
	GGCACACAAATGCTGGCAGA+GGG	+	chr4_1:78804128-78804147	None:intergenic	55.0%
	TGGCACACAAATGCTGGCAG+AGG	+	chr4_1:78804129-78804148	None:intergenic	55.0%
	GAGTGCGAGTAGAGAGAGTG+AGG	-	chr4_1:78803217-78803236	Msa0575010:three_prime_UTR	55.0%
	TCTTCGTCGCTTCAGCCAAG+AGG	-	chr4_1:78803370-78803389	Msa0575010:three_prime_UTR	55.0%
	GTCGCTTCAGCCAAGAGGTT+AGG	-	chr4_1:78803375-78803394	Msa0575010:three_prime_UTR	55.0%
	TCACGTGACCGAAAGGTCAC+AGG	-	chr4_1:78803675-78803694	Msa0575010:intron	55.0%
	AGCTACTGCATCGCACCGTT+TGG	+	chr4_1:78803740-78803759	None:intergenic	55.0%
	GGCACACAAATGCTGGCAGA+GGG	+	chr4_1:78804128-78804147	None:intergenic	55.0%
	TGGCACACAAATGCTGGCAG+AGG	+	chr4_1:78804129-78804148	None:intergenic	55.0%
	ACGGCGATGCAAGAAGGTTG+AGG	+	chr4_1:78804664-78804683	None:intergenic	55.0%
	GGCACACAAATGCTGGCAGA+GGG	+	chr4_1:78804128-78804147	None:intergenic	55.0%
	TGGCACACAAATGCTGGCAG+AGG	+	chr4_1:78804129-78804148	None:intergenic	55.0%
!!	ACAATGGCGGGTCGGAGAAG+CGG	-	chr4_1:78803257-78803276	Msa0575010:three_prime_UTR	60.0%
	TGGGGATGTGCCACCTTGAG+TGG	-	chr4_1:78805417-78805436	Msa0575010:CDS	60.0%
!!	ACAATGGCGGGTCGGAGAAG+CGG	-	chr4_1:78803257-78803276	Msa0575010:three_prime_UTR	60.0%
	TGGGGATGTGCCACCTTGAG+TGG	-	chr4_1:78805417-78805436	Msa0575010:CDS	60.0%
	GCGGGTCGGAGAAGCGGTTT+GGG	-	chr4_1:78803263-78803282	Msa0575010:three_prime_UTR	65.0%
	GCGGGTCGGAGAAGCGGTTT+GGG	-	chr4_1:78803263-78803282	Msa0575010:three_prime_UTR	65.0%
	GGCGGGTCGGAGAAGCGGTT+TGG	-	chr4_1:78803262-78803281	Msa0575010:three_prime_UTR	70.0%
	GGCGGGTCGGAGAAGCGGTT+TGG	-	chr4_1:78803262-78803281	Msa0575010:three_prime_UTR	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	78803182	78805543	78803182	ID=Msa0575010;Name=Msa0575010
chr4_1	mRNA	78803182	78805543	78803182	ID=Msa0575010-mRNA-1;Parent=Msa0575010;Name=Msa0575010-mRNA-1;_AED=0.03;_eAED=0.03;_QI=78\|0\|0.5\|1\|1\|1\|4\|282\|220
chr4_1	exon	78803182	78803640	78803182	ID=Msa0575010-mRNA-1:exon:28021;Parent=Msa0575010-mRNA-1
chr4_1	exon	78804159	78804284	78804159	ID=Msa0575010-mRNA-1:exon:28020;Parent=Msa0575010-mRNA-1
chr4_1	exon	78804375	78804515	78804375	ID=Msa0575010-mRNA-1:exon:28019;Parent=Msa0575010-mRNA-1
chr4_1	exon	78805247	78805543	78805247	ID=Msa0575010-mRNA-1:exon:28018;Parent=Msa0575010-mRNA-1
chr4_1	five_prime_UTR	78805466	78805543	78805466	ID=Msa0575010-mRNA-1:five_prime_utr;Parent=Msa0575010-mRNA-1
chr4_1	CDS	78805247	78805465	78805247	ID=Msa0575010-mRNA-1:cds;Parent=Msa0575010-mRNA-1
chr4_1	CDS	78804375	78804515	78804375	ID=Msa0575010-mRNA-1:cds;Parent=Msa0575010-mRNA-1
chr4_1	CDS	78804159	78804284	78804159	ID=Msa0575010-mRNA-1:cds;Parent=Msa0575010-mRNA-1
chr4_1	CDS	78803464	78803640	78803464	ID=Msa0575010-mRNA-1:cds;Parent=Msa0575010-mRNA-1
chr4_1	three_prime_UTR	78803182	78803463	78803182	ID=Msa0575010-mRNA-1:three_prime_utr;Parent=Msa0575010-mRNA-1

Gene Sequence

>Msa0575010

ATGGCGGGTCGGAGAAGCGGTTTGGGTCTGATGAATTACCTAAGAGTTCATGTTGATGCTTCTTCTGCTCTCAACCACCAATCTCCTTTGCGCATTCTTCCCAATTTCTCTCTTCGTCGCTTCAGCCAAGAGGTTAGGACAACTTTTCTTGACAAATCGGAGGTCACTGATCGCGTCATTTCCTGCGTCAAAAAATTTGACAAAGTTGATCCTTCTAAGGTTACCCCAACTGCTCATTTCTACGACGACCTTGGATTGGATAGTTTAGATGCCATAGAGATCTGTATGGATCTTGATACAGAGTTTGGATTTGAGATTCCTGAAAATGAAGTAGACAAGATCCTCTCCGTTAATCAAGCTCGTAGAATCATCCACAATTTTAAGACATTTTTTGCCTTGGTCAGGAGAACTTTTCTCGATAAATCGGAGGTCACTGAACGCGTCATTTCCTGCGTCAAAAAATTTGACAAAGTTGATCCTTCTAAGGTTACCCCAACTGCTCATTTCTACGACGACCTTGGATTGGATAGTTTAGATGCCATAGAGATCTGTATGGATCTTGATACAGAGTTTGGATTTGAGATTCCTGAAAATGAAGTAGACAAGATCCTCTCCGTTAATCAAGCTGTTGATTTCATTGCATCTCATCCTCAGGCGAAGTAG

Protein sequence

>Msa0575010

MAGRRSGLGLMNYLRVHVDASSALNHQSPLRILPNFSLRRFSQEVRTTFLDKSEVTDRVISCVKKFDKVDPSKVTPTAHFYDDLGLDSLDAIEICMDLDTEFGFEIPENEVDKILSVNQARRIIHNFKTFFALVRRTFLDKSEVTERVISCVKKFDKVDPSKVTPTAHFYDDLGLDSLDAIEICMDLDTEFGFEIPENEVDKILSVNQAVDFIASHPQAK*