AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0368610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0368610 MtrunA17_Chr3g0116801 96.632 386 9 2 1 382 1 386 0.0 762
Msa0368610 MtrunA17_Chr8g0376411 88.413 397 21 8 1 382 1 387 0.0 684
Msa0368610 MtrunA17_Chr7g0214101 40.909 308 178 1 75 378 22 329 3.47e-82 255
Msa0368610 MtrunA17_Chr4g0009631 36.677 319 190 5 72 380 29 345 2.79e-59 196
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0368610 AT2G34590.1 80.513 390 67 5 1 382 1 389 0.0 628
Msa0368610 AT1G30120.1 78.934 394 66 5 1 382 1 389 0.0 626
Msa0368610 AT5G50850.1 41.311 305 175 1 78 378 33 337 8.99e-84 260
Msa0368610 AT1G55510.1 36.810 326 200 4 53 376 7 328 5.05e-62 203
Msa0368610 AT3G13450.1 36.943 314 195 3 69 380 26 338 1.14e-60 200

Find 154 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCATCCATTCAAATTAT+TGG 0.134435 3_1:+65385091 None:intergenic
TGAAAATTTCCATGACTATT+TGG 0.148797 3_1:-65385441 Msa0368610:CDS
CACAACCTTATATTGATATT+TGG 0.155164 3_1:-65385165 Msa0368610:three_prime_UTR
TCAAATTATTGGCCAGTTCT+AGG 0.196984 3_1:+65385102 None:intergenic
TTCCAATGTTCCGGCGTATA+TGG 0.225708 3_1:+65385377 None:intergenic
ACTGCGAAGACACGGTTAAT+TGG 0.227764 3_1:-65385292 Msa0368610:three_prime_UTR
TCCAATGTTCCGGCGTATAT+GGG 0.276920 3_1:+65385378 None:intergenic
TTCCACAATTGTTAGAGATT+TGG 0.278564 3_1:+65385996 None:intergenic
GAAATCGGGCGGAGAAATTA+AGG 0.281257 3_1:+65388045 None:intergenic
CCATTTGATCTTCACACAAT+TGG 0.288971 3_1:-65385554 Msa0368610:CDS
ACCTTTGGATTGAAAGGAAT+TGG 0.294117 3_1:+65387921 None:intergenic
GATGAATAATCTAGTTTAAC+TGG 0.303371 3_1:+65385238 None:intergenic
GCTTCTGCGGCCTCAAAACC+TGG 0.328330 3_1:-65387569 Msa0368610:CDS
GGCGAAGATGTAGGTCATTA+TGG 0.341430 3_1:-65386190 Msa0368610:CDS
GGATCCTTGTGTTTGTGTTA+TGG 0.347565 3_1:-65386212 Msa0368610:CDS
ATAAACCAAATATCAATATA+AGG 0.354174 3_1:+65385160 None:intergenic
GACCTGATGTCAATTACTTC+AGG 0.354470 3_1:+65385584 None:intergenic
TAACTTACTGCAACTGCATT+AGG 0.356093 3_1:+65387679 None:intergenic
AGCAGAACACTCACAGCGTT+TGG 0.367856 3_1:-65385894 Msa0368610:CDS
GATCCTTGTGTTTGTGTTAT+GGG 0.370683 3_1:-65386211 Msa0368610:CDS
ATCTGATGCAAAGGTGAATC+AGG 0.372852 3_1:-65387752 Msa0368610:CDS
TGTCCATTCTTCCAATGTTC+CGG 0.376343 3_1:+65385368 None:intergenic
ATGCTGAAGTTATCTGTTAT+AGG 0.377475 3_1:-65385075 Msa0368610:three_prime_UTR
CATTTGATCTTCACACAATT+GGG 0.378344 3_1:-65385553 Msa0368610:CDS
CCAATTGTGTGAAGATCAAA+TGG 0.384655 3_1:+65385554 None:intergenic
CTTCACGGAGGGCTTCAAAA+AGG 0.390509 3_1:+65386257 None:intergenic
TTTCTATGAAGAAATGAAAT+CGG 0.393438 3_1:+65388030 None:intergenic
GTGAAGGCGTTCTCAGCAAT+AGG 0.393983 3_1:+65386103 None:intergenic
TTTATCTCAATTGTATTGTA+TGG 0.395838 3_1:-65385041 Msa0368610:three_prime_UTR
CTGCGAAGACACGGTTAATT+GGG 0.406484 3_1:-65385291 Msa0368610:three_prime_UTR
TGTATGCGGACGGGTGGAAT+TGG 0.407666 3_1:-65385488 Msa0368610:CDS
GAACATGGGATTTCTACTTC+TGG 0.411008 3_1:-65386026 Msa0368610:CDS
GACAATACATACTCTTCATC+TGG 0.412124 3_1:+65385722 None:intergenic
ATCAAGCCCTTGGCGTTGTA+AGG 0.414249 3_1:+65385821 None:intergenic
TGAAGGTTTGGAAGAAGAAA+TGG 0.415831 3_1:-65386239 Msa0368610:CDS
TGAAGCCCTCCGTGAAGGTT+TGG 0.426813 3_1:-65386251 Msa0368610:CDS
TGAAGGCGTTCTCAGCAATA+GGG 0.426997 3_1:+65386104 None:intergenic
CAGCTCCCAATGCTTGGAAA+AGG 0.429441 3_1:+65387965 None:intergenic
AGAAACCTAGCTGAAAAGTT+TGG 0.429473 3_1:-65386148 Msa0368610:CDS
TATCATATGTTTATCCTCTC+AGG 0.437493 3_1:-65385411 Msa0368610:CDS
TTGAAGAAGCTGAGATGGTT+AGG 0.438904 3_1:-65385697 Msa0368610:CDS
AAAATACCAGTTGTCATTCG+TGG 0.440767 3_1:-65385944 Msa0368610:CDS
GGCATTGGAGCTGCCATGAC+TGG 0.441530 3_1:-65386073 Msa0368610:CDS
CCCCATATACGCCGGAACAT+TGG 0.443847 3_1:-65385379 Msa0368610:CDS
GAAAAGGGTCGCCATTGGAT+TGG 0.453247 3_1:+65387981 None:intergenic
CGCAGCTTTCATCAAGCCCT+TGG 0.454591 3_1:+65385811 None:intergenic
TGAGAGGATAAACATATGAT+AGG 0.455116 3_1:+65385413 None:intergenic
TTTCTTCTTCCAAACCTTCA+CGG 0.456792 3_1:+65386242 None:intergenic
GATGAGAAGAATGGAAATGA+AGG 0.457032 3_1:+65388003 None:intergenic
CGTGTCTTCGCAGTAATCAT+TGG 0.459156 3_1:+65385301 None:intergenic
CAAATTATTGGCCAGTTCTA+GGG 0.460728 3_1:+65385103 None:intergenic
ACCCTGAAGTAATTGACATC+AGG 0.461035 3_1:-65385586 Msa0368610:CDS
CAAGCCACCATCTGAATACC+AGG 0.461946 3_1:+65385851 None:intergenic
CCCCTTGTTCACTAATGTCT+TGG 0.463054 3_1:+65385613 None:intergenic
TCCAATTCCTTTCAATCCAA+AGG 0.466235 3_1:-65387922 Msa0368610:intron
AAACAAACCTTTGGATTGAA+AGG 0.467045 3_1:+65387915 None:intergenic
ATTGCTGAGAACGCCTTCAC+TGG 0.467578 3_1:-65386100 Msa0368610:CDS
GAACTGGCCAATAATTTGAA+TGG 0.470214 3_1:-65385098 Msa0368610:three_prime_UTR
GAGAACGCCTTCACTGGAAT+GGG 0.477855 3_1:-65386094 Msa0368610:CDS
ATTCGTGGCCCCGGTGGAGT+TGG 0.478046 3_1:-65385929 Msa0368610:CDS
TGTGTTCTAATTCTAATGTC+TGG 0.484277 3_1:-65384977 Msa0368610:three_prime_UTR
CCGGGGCCACGAATGACAAC+TGG 0.484379 3_1:+65385938 None:intergenic
GCCTTCACTGGAATGGGCAT+TGG 0.484563 3_1:-65386088 Msa0368610:CDS
GTTTGGTGACCTCAGAGTCT+TGG 0.486909 3_1:-65386131 Msa0368610:CDS
GGTGGAGTTGGTCGGCAACT+TGG 0.489359 3_1:-65385917 Msa0368610:CDS
AAGTTGCCGACCAACTCCAC+CGG 0.491956 3_1:+65385919 None:intergenic
TGAGAACGCCTTCACTGGAA+TGG 0.492235 3_1:-65386095 Msa0368610:CDS
TAACAGCAGCTCCCAATGCT+TGG 0.497792 3_1:+65387959 None:intergenic
GGTCTGAGGCCAACCATTGA+GGG 0.502439 3_1:-65386052 Msa0368610:CDS
TCCCATGTTCATGCCCTCAA+TGG 0.502558 3_1:+65386039 None:intergenic
ATTCGGGTGAGCCCTAGAAC+TGG 0.505643 3_1:-65385114 Msa0368610:three_prime_UTR
AGCTCCCAATGCTTGGAAAA+GGG 0.505657 3_1:+65387966 None:intergenic
GCTTGGAAAAGGGTCGCCAT+TGG 0.506284 3_1:+65387976 None:intergenic
TTGGATTGAAAGGAATTGGA+TGG 0.506432 3_1:+65387925 None:intergenic
AGGAATTGGATGGAGACAAA+GGG 0.507813 3_1:+65387935 None:intergenic
TCACAATATTAACTTATTCG+AGG 0.508951 3_1:-65385661 Msa0368610:CDS
TTCTATGAAGAAATGAAATC+GGG 0.511349 3_1:+65388031 None:intergenic
AGTTGCCGACCAACTCCACC+GGG 0.512106 3_1:+65385920 None:intergenic
ACCTGATGTCAATTACTTCA+GGG 0.512110 3_1:+65385585 None:intergenic
AACCAAATCTCTAACAATTG+TGG 0.513777 3_1:-65385998 Msa0368610:CDS
AACCATTGAGGGCATGAACA+TGG 0.515181 3_1:-65386041 Msa0368610:CDS
GACGCATCGGGTTCTCATAG+TGG 0.516325 3_1:-65385516 Msa0368610:CDS
ATGAGACGGAGGGAGCTTGT+TGG 0.520529 3_1:-65388164 Msa0368610:five_prime_UTR
ACGCCGGAACATTGGAAGAA+TGG 0.522613 3_1:-65385371 Msa0368610:CDS
CATCTGGAATTCTTTCCTTG+AGG 0.526335 3_1:+65385738 None:intergenic
TTCTTCCAAACCTTCACGGA+GGG 0.533768 3_1:+65386246 None:intergenic
ATTGGATTGGATGAGAAGAA+TGG 0.536034 3_1:+65387994 None:intergenic
ATCAGGAGGAGCAACTCGTA+AGG 0.536409 3_1:-65387719 Msa0368610:CDS
TATTAACTTATTCGAGGATG+AGG 0.538579 3_1:-65385655 Msa0368610:CDS
AATATTGTGACATGCTCACC+AGG 0.538755 3_1:+65385674 None:intergenic
GGAATGCTGCATTACACATC+CGG 0.540625 3_1:-65385977 Msa0368610:CDS
ATGTTCATGCCCTCAATGGT+TGG 0.542895 3_1:+65386043 None:intergenic
GTCACTTGAAGAAGCTGAGA+TGG 0.543358 3_1:-65385702 Msa0368610:CDS
CAAATATCAATATAAGGTTG+TGG 0.543535 3_1:+65385166 None:intergenic
ACTGCAGTCACAATTTGAGC+AGG 0.546350 3_1:+65385336 None:intergenic
TCCAATGCCCATTCCAGTGA+AGG 0.550685 3_1:+65386087 None:intergenic
CCAGTTGTCATTCGTGGCCC+CGG 0.551669 3_1:-65385938 Msa0368610:CDS
TGCCAAGACATTAGTGAACA+AGG 0.551975 3_1:-65385615 Msa0368610:CDS
TGGTCTGAGGCCAACCATTG+AGG 0.554354 3_1:-65386053 Msa0368610:CDS
GTGGAGGAGTGTATGCGGAC+GGG 0.556919 3_1:-65385497 Msa0368610:CDS
GTGGCCCCGGTGGAGTTGGT+CGG 0.557377 3_1:-65385925 Msa0368610:CDS
CCAATGTTCCGGCGTATATG+GGG 0.563247 3_1:+65385379 None:intergenic
TTCAACACCTTACAACGCCA+AGG 0.564472 3_1:-65385828 Msa0368610:CDS
AAGGAATTGGATGGAGACAA+AGG 0.566066 3_1:+65387934 None:intergenic
GGTTGGCCTCAGACCAGTCA+TGG 0.570730 3_1:+65386060 None:intergenic
TGTGTTATGGGCGAAGATGT+AGG 0.571870 3_1:-65386199 Msa0368610:CDS
GTTTGGAAGAAGAAATGGAA+AGG 0.572313 3_1:-65386234 Msa0368610:CDS
AAGCAGTTCCGTGGCTTCTG+CGG 0.579023 3_1:-65387582 Msa0368610:CDS
ATCAATCCCTGGTATTCAGA+TGG 0.579633 3_1:-65385858 Msa0368610:CDS
ATTCTTCTCATCCAATCCAA+TGG 0.581695 3_1:-65387992 Msa0368610:exon
TTTGGAAGAAGAAATGGAAA+GGG 0.583683 3_1:-65386233 Msa0368610:CDS
ACCATTGAGGGCATGAACAT+GGG 0.585824 3_1:-65386040 Msa0368610:CDS
TAGGAGCATCCAAATAGTCA+TGG 0.589072 3_1:+65385432 None:intergenic
AGTGGAGGAGTGTATGCGGA+CGG 0.600689 3_1:-65385498 Msa0368610:CDS
GAGGAGTGTATGCGGACGGG+TGG 0.604447 3_1:-65385494 Msa0368610:CDS
ATATCAATATAAGGTTGTGG+TGG 0.604837 3_1:+65385169 None:intergenic
TCAACACCTTACAACGCCAA+GGG 0.608126 3_1:-65385827 Msa0368610:CDS
TAACCGATTTCAGAGAGGAA+AGG 0.609166 3_1:-65387799 Msa0368610:intron
GCCAAGACATTAGTGAACAA+GGG 0.615498 3_1:-65385614 Msa0368610:CDS
GACAAATAAAATGAGACGGA+GGG 0.618211 3_1:-65388174 None:intergenic
TGTTTGTTGTTGAGTACCGC+TGG 0.623664 3_1:+65388086 None:intergenic
CTTCTGCGGCCTCAAAACCT+GGG 0.625772 3_1:-65387568 Msa0368610:intron
TCAGGAGGAGCAACTCGTAA+GGG 0.626298 3_1:-65387718 Msa0368610:CDS
GGAATTGGATGGAGACAAAG+GGG 0.627837 3_1:+65387936 None:intergenic
GAAGGCGTTCTCAGCAATAG+GGG 0.627917 3_1:+65386105 None:intergenic
AGAGGACAAATAAAATGAGA+CGG 0.627922 3_1:-65388178 None:intergenic
TGTTCCGGCGTATATGGGGT+CGG 0.628487 3_1:+65385383 None:intergenic
TCATTATGGAGGATCTTACA+AGG 0.628639 3_1:-65386176 Msa0368610:CDS
GAAGCTGAGATGGTTAGGCC+TGG 0.629301 3_1:-65385692 Msa0368610:CDS
CCAAGACATTAGTGAACAAG+GGG 0.633005 3_1:-65385613 Msa0368610:CDS
AATCCCTGGTATTCAGATGG+TGG 0.638274 3_1:-65385855 Msa0368610:CDS
ATGAGAAGAATGGAAATGAA+GGG 0.639054 3_1:+65388004 None:intergenic
GAGCTGCCATGACTGGTCTG+AGG 0.641109 3_1:-65386066 Msa0368610:CDS
CAATGATTACTGCGAAGACA+CGG 0.642599 3_1:-65385300 Msa0368610:three_prime_UTR
GGACAAATAAAATGAGACGG+AGG 0.648207 3_1:-65388175 None:intergenic
AAAACAGGGAAGCAGTTCCG+TGG 0.648998 3_1:-65387591 Msa0368610:intron
TATGAAGAAATGAAATCGGG+CGG 0.658445 3_1:+65388034 None:intergenic
GGAGGAGCAACTCGTAAGGG+TGG 0.658892 3_1:-65387715 Msa0368610:CDS
GTTGTCATTCGTGGCCCCGG+TGG 0.664280 3_1:-65385935 Msa0368610:CDS
TCATAGTGGAGGAGTGTATG+CGG 0.664859 3_1:-65385502 Msa0368610:CDS
GCATCGGGTTCTCATAGTGG+AGG 0.665664 3_1:-65385513 Msa0368610:CDS
CTTCTTCCAAACCTTCACGG+AGG 0.668917 3_1:+65386245 None:intergenic
TGTCAGATCATCTGATGCAA+AGG 0.673345 3_1:-65387761 Msa0368610:CDS
TAGGGGTGTCCAAGACTCTG+AGG 0.678864 3_1:+65386122 None:intergenic
TGGGGTCGGCACATCCTGAG+AGG 0.685583 3_1:+65385397 None:intergenic
ATGCTGCATTACACATCCGG+AGG 0.700382 3_1:-65385974 Msa0368610:CDS
ATAGTTGTTACTAGTACCAG+CGG 0.700449 3_1:-65388102 Msa0368610:five_prime_UTR
GTTTAACTGGACTAACACAA+CGG 0.711671 3_1:+65385251 None:intergenic
GAAGATGTAGGTCATTATGG+AGG 0.718502 3_1:-65386187 Msa0368610:CDS
TGTGCCGACCCCATATACGC+CGG 0.725812 3_1:-65385387 Msa0368610:CDS
TCGCCCATAACACAAACACA+AGG 0.727801 3_1:+65386208 None:intergenic
AACATTGGAAGAATGGACAG+TGG 0.729198 3_1:-65385364 Msa0368610:CDS
AAGCCACCATCTGAATACCA+GGG 0.729816 3_1:+65385852 None:intergenic
GTTGCCGACCAACTCCACCG+GGG 0.782401 3_1:+65385921 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGATTTTATTGTAATTTT+AGG + chr3_1:65385733-65385752 None:intergenic 10.0%
!! TAAAATCTAATATATTCGAT+CGG - chr3_1:65385743-65385762 Msa0368610:CDS 15.0%
!!! ATTGTGTTTGATTTTTAAAA+AGG + chr3_1:65385784-65385803 None:intergenic 15.0%
!! ATCACAAAATAAAATAGAAA+AGG + chr3_1:65386136-65386155 None:intergenic 15.0%
!! TTAGAAAATGTAATGAAATA+TGG - chr3_1:65386308-65386327 Msa0368610:intron 15.0%
!! ATAAACCAAATATCAATATA+AGG + chr3_1:65387983-65388002 None:intergenic 15.0%
!! AATTGAGATAAAAACAAAAA+AGG + chr3_1:65388091-65388110 None:intergenic 15.0%
!! TTTCTATGAAGAAATGAAAT+CGG + chr3_1:65385113-65385132 None:intergenic 20.0%
!!! ATAAACTTGTTTTTTGATGT+TGG - chr3_1:65385277-65385296 Msa0368610:three_prime_UTR 20.0%
!!! TAAACTTGTTTTTTGATGTT+GGG - chr3_1:65385278-65385297 Msa0368610:three_prime_UTR 20.0%
!!! TTGTAATTTTAGGAAGAAAA+GGG + chr3_1:65385723-65385742 None:intergenic 20.0%
!!! ATTGTAATTTTAGGAAGAAA+AGG + chr3_1:65385724-65385743 None:intergenic 20.0%
!! AAAATCTAATATATTCGATC+GGG - chr3_1:65385744-65385763 Msa0368610:CDS 20.0%
!!! TGTTTTCTCAAAGTATAAAA+TGG - chr3_1:65386092-65386111 Msa0368610:CDS 20.0%
!!! ATTTTATTTTGTGATGAACA+AGG - chr3_1:65386141-65386160 Msa0368610:CDS 20.0%
!!! TTTTACAAAATACAATGCTT+AGG + chr3_1:65386420-65386439 None:intergenic 20.0%
!!! AAATGTTAAATTTTTGTGCA+AGG - chr3_1:65386560-65386579 Msa0368610:intron 20.0%
!!! TGTTGGCATTTTTTTTTTAT+TGG - chr3_1:65386776-65386795 Msa0368610:intron 20.0%
!!! GTTTGAGTTTTTTTTAGATT+CGG - chr3_1:65388009-65388028 Msa0368610:five_prime_UTR 20.0%
!!! TTTGAGTTTTTTTTAGATTC+GGG - chr3_1:65388010-65388029 Msa0368610:five_prime_UTR 20.0%
!! TTTATCTCAATTGTATTGTA+TGG - chr3_1:65388099-65388118 Msa0368610:five_prime_UTR 20.0%
!!! GTTATTTTAGTAGTACAATG+TGG - chr3_1:65384998-65385017 Msa0368610:three_prime_UTR 25.0%
! TTCTATGAAGAAATGAAATC+GGG + chr3_1:65385112-65385131 None:intergenic 25.0%
! TTGCATAAAAAACAAACCTT+TGG + chr3_1:65385237-65385256 None:intergenic 25.0%
! AATCAAGTTTGAATGAAAAC+AGG - chr3_1:65385534-65385553 Msa0368610:CDS 25.0%
! ATCAAGTTTGAATGAAAACA+GGG - chr3_1:65385535-65385554 Msa0368610:CDS 25.0%
!!! AGTCAATTTAGTTCATCTTT+TGG - chr3_1:65386057-65386076 Msa0368610:CDS 25.0%
! TTCTAAATTAAGATATCCTC+CGG + chr3_1:65386294-65386313 None:intergenic 25.0%
!!! GCATTTTTTTTCTCTCTTAT+TGG - chr3_1:65386721-65386740 Msa0368610:intron 25.0%
! TAAAAAAAAAATGCCAACAC+AGG + chr3_1:65386775-65386794 None:intergenic 25.0%
! ATTGAATAGTTATGACCAAT+AGG - chr3_1:65386807-65386826 Msa0368610:intron 25.0%
! TCACAATATTAACTTATTCG+AGG - chr3_1:65387479-65387498 Msa0368610:intron 25.0%
! ATTCAATAAAAAAGACGCAT+CGG - chr3_1:65387611-65387630 Msa0368610:intron 25.0%
! TGAAAATTTCCATGACTATT+TGG - chr3_1:65387699-65387718 Msa0368610:CDS 25.0%
!!! GGTTAATTGGGATATTTTTT+TGG - chr3_1:65387861-65387880 Msa0368610:intron 25.0%
!! GATGAATAATCTAGTTTAAC+TGG + chr3_1:65387905-65387924 None:intergenic 25.0%
! CAAATATCAATATAAGGTTG+TGG + chr3_1:65387977-65387996 None:intergenic 25.0%
! CACAACCTTATATTGATATT+TGG - chr3_1:65387975-65387994 Msa0368610:CDS 25.0%
ATGAGAAGAATGGAAATGAA+GGG + chr3_1:65385139-65385158 None:intergenic 30.0%
AAACAAACCTTTGGATTGAA+AGG + chr3_1:65385228-65385247 None:intergenic 30.0%
!!! CAATCTATCGCTCTTATTTT+TGG - chr3_1:65385254-65385273 Msa0368610:three_prime_UTR 30.0%
!!! AATCAGGTTGTTTTGAAATC+AGG - chr3_1:65385404-65385423 Msa0368610:CDS 30.0%
AATTACACAGAAATGTGGAA+TGG + chr3_1:65385505-65385524 None:intergenic 30.0%
ACATAACAAGAAGTGATTGT+AGG + chr3_1:65385608-65385627 None:intergenic 30.0%
CTAAAAAGGTAAGGAAGTTT+AGG + chr3_1:65385930-65385949 None:intergenic 30.0%
! CTAAACTTCCTTACCTTTTT+AGG - chr3_1:65385928-65385947 Msa0368610:CDS 30.0%
TCTTTACACCTAAAAAGGTA+AGG + chr3_1:65385939-65385958 None:intergenic 30.0%
!!! CTTTTTAGGTGTAAAGAATG+CGG - chr3_1:65385942-65385961 Msa0368610:CDS 30.0%
!!! TTTTTAGGTGTAAAGAATGC+GGG - chr3_1:65385943-65385962 Msa0368610:CDS 30.0%
!!! GATGTATTGTTGTTTTCAGA+TGG + chr3_1:65386175-65386194 None:intergenic 30.0%
TTGGTATTGCATACATAGAA+AGG + chr3_1:65386231-65386250 None:intergenic 30.0%
TCCCATATGTTAGAAATATC+CGG - chr3_1:65386272-65386291 Msa0368610:CDS 30.0%
! TCCGGATATTTCTAACATAT+GGG + chr3_1:65386276-65386295 None:intergenic 30.0%
GACACGATAATGATATTATG+AGG - chr3_1:65386382-65386401 Msa0368610:intron 30.0%
!! CAATTTTGTTTGATGAAAGC+AGG + chr3_1:65386464-65386483 None:intergenic 30.0%
! TGAGTAAAAAAGCACACATA+TGG + chr3_1:65386655-65386674 None:intergenic 30.0%
TACTCATTAGCATAAGCTTT+CGG - chr3_1:65386669-65386688 Msa0368610:intron 30.0%
TTTGGAAGAAGAAATGGAAA+GGG - chr3_1:65386907-65386926 Msa0368610:intron 30.0%
AACCAAATCTCTAACAATTG+TGG - chr3_1:65387142-65387161 Msa0368610:intron 30.0%
TTCCACAATTGTTAGAGATT+TGG + chr3_1:65387147-65387166 None:intergenic 30.0%
! TGTTTTGCTTTATAACCTCA+AGG - chr3_1:65387387-65387406 Msa0368610:intron 30.0%
TATTAACTTATTCGAGGATG+AGG - chr3_1:65387485-65387504 Msa0368610:intron 30.0%
CATTTGATCTTCACACAATT+GGG - chr3_1:65387587-65387606 Msa0368610:CDS 30.0%
TTCAATAAAAAAGACGCATC+GGG - chr3_1:65387612-65387631 Msa0368610:intron 30.0%
! GTCATGGAAATTTTCAGTAA+TGG + chr3_1:65387695-65387714 None:intergenic 30.0%
TGAGAGGATAAACATATGAT+AGG + chr3_1:65387730-65387749 None:intergenic 30.0%
TATCATATGTTTATCCTCTC+AGG - chr3_1:65387729-65387748 Msa0368610:CDS 30.0%
ATATCAATATAAGGTTGTGG+TGG + chr3_1:65387974-65387993 None:intergenic 30.0%
TCAGCATCCATTCAAATTAT+TGG + chr3_1:65388052-65388071 None:intergenic 30.0%
ATGCTGAAGTTATCTGTTAT+AGG - chr3_1:65388065-65388084 Msa0368610:five_prime_UTR 30.0%
TGTGTTCTAATTCTAATGTC+TGG - chr3_1:65388163-65388182 Msa0368610:five_prime_UTR 30.0%
ATAGTTGTTACTAGTACCAG+CGG - chr3_1:65385038-65385057 Msa0368610:three_prime_UTR 35.0%
TATGAAGAAATGAAATCGGG+CGG + chr3_1:65385109-65385128 None:intergenic 35.0%
GATGAGAAGAATGGAAATGA+AGG + chr3_1:65385140-65385159 None:intergenic 35.0%
! ATTGGATTGGATGAGAAGAA+TGG + chr3_1:65385149-65385168 None:intergenic 35.0%
ATTCTTCTCATCCAATCCAA+TGG - chr3_1:65385148-65385167 Msa0368610:three_prime_UTR 35.0%
TTGGATTGAAAGGAATTGGA+TGG + chr3_1:65385218-65385237 None:intergenic 35.0%
TCCAATTCCTTTCAATCCAA+AGG - chr3_1:65385218-65385237 Msa0368610:three_prime_UTR 35.0%
ACCTTTGGATTGAAAGGAAT+TGG + chr3_1:65385222-65385241 None:intergenic 35.0%
!! TTTTGTAACCGATTTCAGAG+AGG - chr3_1:65385336-65385355 Msa0368610:exon 35.0%
TAACTTACTGCAACTGCATT+AGG + chr3_1:65385464-65385483 None:intergenic 35.0%
GATGCAATTACACAGAAATG+TGG + chr3_1:65385510-65385529 None:intergenic 35.0%
ACAAGAAGTGATTGTAGGAT+AGG + chr3_1:65385603-65385622 None:intergenic 35.0%
CTACATGCCTTATATTCGAT+CGG - chr3_1:65385809-65385828 Msa0368610:CDS 35.0%
TACATGCCTTATATTCGATC+GGG - chr3_1:65385810-65385829 Msa0368610:CDS 35.0%
!!! GAATGTTTTTAGTGCATGCT+TGG - chr3_1:65385844-65385863 Msa0368610:CDS 35.0%
!! TTTTTAGTGCATGCTTGGTT+TGG - chr3_1:65385849-65385868 Msa0368610:CDS 35.0%
AAAGCTAAGCCTTGAAAAGA+AGG - chr3_1:65385880-65385899 Msa0368610:CDS 35.0%
AAGCTAAGCCTTGAAAAGAA+GGG - chr3_1:65385881-65385900 Msa0368610:CDS 35.0%
CGCATTCTTTACACCTAAAA+AGG + chr3_1:65385944-65385963 None:intergenic 35.0%
!! TTTTAGGTGTAAAGAATGCG+GGG - chr3_1:65385944-65385963 Msa0368610:CDS 35.0%
AGTGAGATGTAATTAGTTCC+AGG - chr3_1:65386015-65386034 Msa0368610:CDS 35.0%
ATTACATCACAACTACATCC+TGG + chr3_1:65386036-65386055 None:intergenic 35.0%
TCTAACATATGGGAAACAGA+TGG + chr3_1:65386266-65386285 None:intergenic 35.0%
! CTCCGGATATTTCTAACATA+TGG + chr3_1:65386277-65386296 None:intergenic 35.0%
CATATGTTAGAAATATCCGG+AGG - chr3_1:65386275-65386294 Msa0368610:intron 35.0%
ATATGGAAACAACTCCTGTA+TGG - chr3_1:65386325-65386344 Msa0368610:intron 35.0%
TCTAGACATTTCTACCATAC+AGG + chr3_1:65386342-65386361 None:intergenic 35.0%
TGTATGGTAGAAATGTCTAG+AGG - chr3_1:65386341-65386360 Msa0368610:intron 35.0%
CATTTAGAAGACTGAAAGCA+TGG + chr3_1:65386545-65386564 None:intergenic 35.0%
AATCCATGTTTCATGAGCAA+AGG - chr3_1:65386596-65386615 Msa0368610:intron 35.0%
ATCCATGTTTCATGAGCAAA+GGG - chr3_1:65386597-65386616 Msa0368610:intron 35.0%
! CTCTTATTGGTTGCATTGAT+TGG - chr3_1:65386734-65386753 Msa0368610:intron 35.0%
!! TTGCATTGATTGGTTGAAGT+TGG - chr3_1:65386744-65386763 Msa0368610:intron 35.0%
TGACCAATAGGCAATAACAA+TGG - chr3_1:65386819-65386838 Msa0368610:intron 35.0%
! ATGCCATTGTTATTGCCTAT+TGG + chr3_1:65386825-65386844 None:intergenic 35.0%
TTTCTTCTTCCAAACCTTCA+CGG + chr3_1:65386901-65386920 None:intergenic 35.0%
TGAAGGTTTGGAAGAAGAAA+TGG - chr3_1:65386901-65386920 Msa0368610:intron 35.0%
GTTTGGAAGAAGAAATGGAA+AGG - chr3_1:65386906-65386925 Msa0368610:intron 35.0%
GATCCTTGTGTTTGTGTTAT+GGG - chr3_1:65386929-65386948 Msa0368610:intron 35.0%
TCATTATGGAGGATCTTACA+AGG - chr3_1:65386964-65386983 Msa0368610:intron 35.0%
AGAAACCTAGCTGAAAAGTT+TGG - chr3_1:65386992-65387011 Msa0368610:intron 35.0%
!! TGGTATTTTAAACTGACCTC+CGG + chr3_1:65387185-65387204 None:intergenic 35.0%
AAAATACCAGTTGTCATTCG+TGG - chr3_1:65387196-65387215 Msa0368610:intron 35.0%
! TCGTATTTTCAATCAATCCC+TGG - chr3_1:65387271-65387290 Msa0368610:intron 35.0%
!! CATGCTCAAAAAGTATCACA+GGG + chr3_1:65387369-65387388 None:intergenic 35.0%
!! ACATGCTCAAAAAGTATCAC+AGG + chr3_1:65387370-65387389 None:intergenic 35.0%
GACAATACATACTCTTCATC+TGG + chr3_1:65387421-65387440 None:intergenic 35.0%
ACCTGATGTCAATTACTTCA+GGG + chr3_1:65387558-65387577 None:intergenic 35.0%
CCAATTGTGTGAAGATCAAA+TGG + chr3_1:65387589-65387608 None:intergenic 35.0%
CCATTTGATCTTCACACAAT+TGG - chr3_1:65387586-65387605 Msa0368610:CDS 35.0%
GTTTAACTGGACTAACACAA+CGG + chr3_1:65387892-65387911 None:intergenic 35.0%
CAAATTATTGGCCAGTTCTA+GGG + chr3_1:65388040-65388059 None:intergenic 35.0%
TCAAATTATTGGCCAGTTCT+AGG + chr3_1:65388041-65388060 None:intergenic 35.0%
GAACTGGCCAATAATTTGAA+TGG - chr3_1:65388042-65388061 Msa0368610:five_prime_UTR 35.0%
AGGAATTGGATGGAGACAAA+GGG + chr3_1:65385208-65385227 None:intergenic 40.0%
AAGGAATTGGATGGAGACAA+AGG + chr3_1:65385209-65385228 None:intergenic 40.0%
! TAACCGATTTCAGAGAGGAA+AGG - chr3_1:65385341-65385360 Msa0368610:exon 40.0%
!! CTACCTTTCCTCTCTGAAAT+CGG + chr3_1:65385347-65385366 None:intergenic 40.0%
TGTCAGATCATCTGATGCAA+AGG - chr3_1:65385379-65385398 Msa0368610:CDS 40.0%
ATCTGATGCAAAGGTGAATC+AGG - chr3_1:65385388-65385407 Msa0368610:CDS 40.0%
!!! CAGGTTGTTTTGAAATCAGG+AGG - chr3_1:65385407-65385426 Msa0368610:CDS 40.0%
CTAATATATTCGATCGGGAC+TGG - chr3_1:65385749-65385768 Msa0368610:CDS 40.0%
TGAAGTCCCGATCGAATATA+AGG + chr3_1:65385819-65385838 None:intergenic 40.0%
TAAGCCTTGAAAAGAAGGGA+AGG - chr3_1:65385885-65385904 Msa0368610:CDS 40.0%
! TAGGCTATGCTTCACTGTTT+TGG + chr3_1:65385911-65385930 None:intergenic 40.0%
!! CAGATGGATTTAGCTTGTGT+TGG + chr3_1:65386250-65386269 None:intergenic 40.0%
GTTTGATGAAAGCAGGAGAA+GGG + chr3_1:65386457-65386476 None:intergenic 40.0%
TGTTTGATGAAAGCAGGAGA+AGG + chr3_1:65386458-65386477 None:intergenic 40.0%
CAAACAAAATTGAGCTCTCG+TGG - chr3_1:65386472-65386491 Msa0368610:intron 40.0%
TCTCGTGGTAATTCATGACA+CGG - chr3_1:65386487-65386506 Msa0368610:intron 40.0%
GGTAATTCATGACACGGTAT+TGG - chr3_1:65386493-65386512 Msa0368610:intron 40.0%
!! GAAGTTGGTAAAACCTGTGT+TGG - chr3_1:65386759-65386778 Msa0368610:intron 40.0%
AAAAGGAGAAGTTCATGCCT+GGG + chr3_1:65386869-65386888 None:intergenic 40.0%
AAAAAGGAGAAGTTCATGCC+TGG + chr3_1:65386870-65386889 None:intergenic 40.0%
GGATCCTTGTGTTTGTGTTA+TGG - chr3_1:65386928-65386947 Msa0368610:intron 40.0%
GAAGATGTAGGTCATTATGG+AGG - chr3_1:65386953-65386972 Msa0368610:intron 40.0%
GAACATGGGATTTCTACTTC+TGG - chr3_1:65387114-65387133 Msa0368610:intron 40.0%
ATCAATCCCTGGTATTCAGA+TGG - chr3_1:65387282-65387301 Msa0368610:intron 40.0%
! CATCTGGAATTCTTTCCTTG+AGG + chr3_1:65387405-65387424 None:intergenic 40.0%
TTGAAGAAGCTGAGATGGTT+AGG - chr3_1:65387443-65387462 Msa0368610:intron 40.0%
AATATTGTGACATGCTCACC+AGG + chr3_1:65387469-65387488 None:intergenic 40.0%
TGCCAAGACATTAGTGAACA+AGG - chr3_1:65387525-65387544 Msa0368610:intron 40.0%
GCCAAGACATTAGTGAACAA+GGG - chr3_1:65387526-65387545 Msa0368610:intron 40.0%
CCAAGACATTAGTGAACAAG+GGG - chr3_1:65387527-65387546 Msa0368610:intron 40.0%
ACCCTGAAGTAATTGACATC+AGG - chr3_1:65387554-65387573 Msa0368610:intron 40.0%
GACCTGATGTCAATTACTTC+AGG + chr3_1:65387559-65387578 None:intergenic 40.0%
!! TAGGAGCATCCAAATAGTCA+TGG + chr3_1:65387711-65387730 None:intergenic 40.0%
TGTCCATTCTTCCAATGTTC+CGG + chr3_1:65387775-65387794 None:intergenic 40.0%
AACATTGGAAGAATGGACAG+TGG - chr3_1:65387776-65387795 Msa0368610:CDS 40.0%
CAATGATTACTGCGAAGACA+CGG - chr3_1:65387840-65387859 Msa0368610:intron 40.0%
!! TGTTTGTTGTTGAGTACCGC+TGG + chr3_1:65385057-65385076 None:intergenic 45.0%
GAAATCGGGCGGAGAAATTA+AGG + chr3_1:65385098-65385117 None:intergenic 45.0%
AGCTCCCAATGCTTGGAAAA+GGG + chr3_1:65385177-65385196 None:intergenic 45.0%
GGAATTGGATGGAGACAAAG+GGG + chr3_1:65385207-65385226 None:intergenic 45.0%
! TAGGACATACCCAGGTTTTG+AGG + chr3_1:65385584-65385603 None:intergenic 45.0%
TTGTAGGATAGGACATACCC+AGG + chr3_1:65385592-65385611 None:intergenic 45.0%
!! TTGGCCTTCCCTTCTTTTCA+AGG + chr3_1:65385892-65385911 None:intergenic 45.0%
GCGTAAAATGTGCTTGTGCA+AGG + chr3_1:65385988-65386007 None:intergenic 45.0%
AGCCCTTTGCTCATGAAACA+TGG + chr3_1:65386602-65386621 None:intergenic 45.0%
GCATAAGCTTTCGGAGTAGT+TGG - chr3_1:65386678-65386697 Msa0368610:intron 45.0%
! CAGATGTGCATTTTGTTCCC+AGG - chr3_1:65386849-65386868 Msa0368610:intron 45.0%
TTCTTCCAAACCTTCACGGA+GGG + chr3_1:65386897-65386916 None:intergenic 45.0%
TCGCCCATAACACAAACACA+AGG + chr3_1:65386935-65386954 None:intergenic 45.0%
TGTGTTATGGGCGAAGATGT+AGG - chr3_1:65386941-65386960 Msa0368610:intron 45.0%
GGCGAAGATGTAGGTCATTA+TGG - chr3_1:65386950-65386969 Msa0368610:intron 45.0%
! GGTCACCAAACTTTTCAGCT+AGG + chr3_1:65387000-65387019 None:intergenic 45.0%
!! TGAAGGCGTTCTCAGCAATA+GGG + chr3_1:65387039-65387058 None:intergenic 45.0%
ATGTTCATGCCCTCAATGGT+TGG + chr3_1:65387100-65387119 None:intergenic 45.0%
! AACCATTGAGGGCATGAACA+TGG - chr3_1:65387099-65387118 Msa0368610:intron 45.0%
! ACCATTGAGGGCATGAACAT+GGG - chr3_1:65387100-65387119 Msa0368610:intron 45.0%
GGAATGCTGCATTACACATC+CGG - chr3_1:65387163-65387182 Msa0368610:intron 45.0%
AATCCCTGGTATTCAGATGG+TGG - chr3_1:65387285-65387304 Msa0368610:intron 45.0%
AAGCCACCATCTGAATACCA+GGG + chr3_1:65387291-65387310 None:intergenic 45.0%
TTCAACACCTTACAACGCCA+AGG - chr3_1:65387312-65387331 Msa0368610:intron 45.0%
TCAACACCTTACAACGCCAA+GGG - chr3_1:65387313-65387332 Msa0368610:intron 45.0%
GTCACTTGAAGAAGCTGAGA+TGG - chr3_1:65387438-65387457 Msa0368610:intron 45.0%
CCCCTTGTTCACTAATGTCT+TGG + chr3_1:65387530-65387549 None:intergenic 45.0%
! TCATAGTGGAGGAGTGTATG+CGG - chr3_1:65387638-65387657 Msa0368610:intron 45.0%
TCCAATGTTCCGGCGTATAT+GGG + chr3_1:65387765-65387784 None:intergenic 45.0%
TTCCAATGTTCCGGCGTATA+TGG + chr3_1:65387766-65387785 None:intergenic 45.0%
ACTGCAGTCACAATTTGAGC+AGG + chr3_1:65387807-65387826 None:intergenic 45.0%
CGTGTCTTCGCAGTAATCAT+TGG + chr3_1:65387842-65387861 None:intergenic 45.0%
ACTGCGAAGACACGGTTAAT+TGG - chr3_1:65387848-65387867 Msa0368610:intron 45.0%
CTGCGAAGACACGGTTAATT+GGG - chr3_1:65387849-65387868 Msa0368610:intron 45.0%
GAAAAGGGTCGCCATTGGAT+TGG + chr3_1:65385162-65385181 None:intergenic 50.0%
! GCGACCCTTTTCCAAGCATT+GGG - chr3_1:65385170-65385189 Msa0368610:three_prime_UTR 50.0%
CAGCTCCCAATGCTTGGAAA+AGG + chr3_1:65385178-65385197 None:intergenic 50.0%
TAACAGCAGCTCCCAATGCT+TGG + chr3_1:65385184-65385203 None:intergenic 50.0%
ATCAGGAGGAGCAACTCGTA+AGG - chr3_1:65385421-65385440 Msa0368610:CDS 50.0%
TCAGGAGGAGCAACTCGTAA+GGG - chr3_1:65385422-65385441 Msa0368610:CDS 50.0%
AAAACAGGGAAGCAGTTCCG+TGG - chr3_1:65385549-65385568 Msa0368610:CDS 50.0%
GTCCACTTAGTCACACTCAC+GGG + chr3_1:65386523-65386542 None:intergenic 50.0%
GGTCCACTTAGTCACACTCA+CGG + chr3_1:65386524-65386543 None:intergenic 50.0%
GGTTCATGACTATTCAGCGC+TGG - chr3_1:65386699-65386718 Msa0368610:intron 50.0%
CTTCACGGAGGGCTTCAAAA+AGG + chr3_1:65386886-65386905 None:intergenic 50.0%
!!! CTTTTTGAAGCCCTCCGTGA+AGG - chr3_1:65386884-65386903 Msa0368610:intron 50.0%
CTTCTTCCAAACCTTCACGG+AGG + chr3_1:65386898-65386917 None:intergenic 50.0%
! GTTTGGTGACCTCAGAGTCT+TGG - chr3_1:65387009-65387028 Msa0368610:intron 50.0%
!! GAAGGCGTTCTCAGCAATAG+GGG + chr3_1:65387038-65387057 None:intergenic 50.0%
!! GTGAAGGCGTTCTCAGCAAT+AGG + chr3_1:65387040-65387059 None:intergenic 50.0%
ATTGCTGAGAACGCCTTCAC+TGG - chr3_1:65387040-65387059 Msa0368610:intron 50.0%
TGAGAACGCCTTCACTGGAA+TGG - chr3_1:65387045-65387064 Msa0368610:intron 50.0%
GAGAACGCCTTCACTGGAAT+GGG - chr3_1:65387046-65387065 Msa0368610:intron 50.0%
TCCAATGCCCATTCCAGTGA+AGG + chr3_1:65387056-65387075 None:intergenic 50.0%
TCCCATGTTCATGCCCTCAA+TGG + chr3_1:65387104-65387123 None:intergenic 50.0%
ATGCTGCATTACACATCCGG+AGG - chr3_1:65387166-65387185 Msa0368610:intron 50.0%
AGCAGAACACTCACAGCGTT+TGG - chr3_1:65387246-65387265 Msa0368610:intron 50.0%
CAAGCCACCATCTGAATACC+AGG + chr3_1:65387292-65387311 None:intergenic 50.0%
ATCAAGCCCTTGGCGTTGTA+AGG + chr3_1:65387322-65387341 None:intergenic 50.0%
CCAATGTTCCGGCGTATATG+GGG + chr3_1:65387764-65387783 None:intergenic 50.0%
ACGCCGGAACATTGGAAGAA+TGG - chr3_1:65387769-65387788 Msa0368610:CDS 50.0%
ATGAGACGGAGGGAGCTTGT+TGG - chr3_1:65384976-65384995 Msa0368610:three_prime_UTR 55.0%
GCTTGGAAAAGGGTCGCCAT+TGG + chr3_1:65385167-65385186 None:intergenic 55.0%
! GGCGACCCTTTTCCAAGCAT+TGG - chr3_1:65385169-65385188 Msa0368610:three_prime_UTR 55.0%
AAGCAGTTCCGTGGCTTCTG+CGG - chr3_1:65385558-65385577 Msa0368610:CDS 55.0%
!!! TTTTGAGGCCGCAGAAGCCA+CGG + chr3_1:65385569-65385588 None:intergenic 55.0%
CTTCTGCGGCCTCAAAACCT+GGG - chr3_1:65385572-65385591 Msa0368610:CDS 55.0%
CACCCGTGAGTGTGACTAAG+TGG - chr3_1:65386518-65386537 Msa0368610:intron 55.0%
GAGCAAAGGGCTCTTGCTTG+TGG - chr3_1:65386610-65386629 Msa0368610:intron 55.0%
CAAAGGGCTCTTGCTTGTGG+TGG - chr3_1:65386613-65386632 Msa0368610:intron 55.0%
TGAAGCCCTCCGTGAAGGTT+TGG - chr3_1:65386889-65386908 Msa0368610:intron 55.0%
!! TAGGGGTGTCCAAGACTCTG+AGG + chr3_1:65387021-65387040 None:intergenic 55.0%
GCCTTCACTGGAATGGGCAT+TGG - chr3_1:65387052-65387071 Msa0368610:intron 55.0%
! TGGTCTGAGGCCAACCATTG+AGG - chr3_1:65387087-65387106 Msa0368610:intron 55.0%
! GGTCTGAGGCCAACCATTGA+GGG - chr3_1:65387088-65387107 Msa0368610:intron 55.0%
AAGTTGCCGACCAACTCCAC+CGG + chr3_1:65387224-65387243 None:intergenic 55.0%
CGCAGCTTTCATCAAGCCCT+TGG + chr3_1:65387332-65387351 None:intergenic 55.0%
GAAGCTGAGATGGTTAGGCC+TGG - chr3_1:65387448-65387467 Msa0368610:intron 55.0%
GACGCATCGGGTTCTCATAG+TGG - chr3_1:65387624-65387643 Msa0368610:intron 55.0%
GCATCGGGTTCTCATAGTGG+AGG - chr3_1:65387627-65387646 Msa0368610:intron 55.0%
! AGTGGAGGAGTGTATGCGGA+CGG - chr3_1:65387642-65387661 Msa0368610:intron 55.0%
TGTATGCGGACGGGTGGAAT+TGG - chr3_1:65387652-65387671 Msa0368610:intron 55.0%
TGTTCCGGCGTATATGGGGT+CGG + chr3_1:65387760-65387779 None:intergenic 55.0%
CCCCATATACGCCGGAACAT+TGG - chr3_1:65387761-65387780 Msa0368610:CDS 55.0%
ATTCGGGTGAGCCCTAGAAC+TGG - chr3_1:65388026-65388045 Msa0368610:five_prime_UTR 55.0%
GGAGGAGCAACTCGTAAGGG+TGG - chr3_1:65385425-65385444 Msa0368610:CDS 60.0%
GCTTCTGCGGCCTCAAAACC+TGG - chr3_1:65385571-65385590 Msa0368610:CDS 60.0%
! GGCATTGGAGCTGCCATGAC+TGG - chr3_1:65387067-65387086 Msa0368610:intron 60.0%
!! GAGCTGCCATGACTGGTCTG+AGG - chr3_1:65387074-65387093 Msa0368610:intron 60.0%
!! GGTTGGCCTCAGACCAGTCA+TGG + chr3_1:65387083-65387102 None:intergenic 60.0%
CCAGTTGTCATTCGTGGCCC+CGG - chr3_1:65387202-65387221 Msa0368610:intron 60.0%
AGTTGCCGACCAACTCCACC+GGG + chr3_1:65387223-65387242 None:intergenic 60.0%
! GGTGGAGTTGGTCGGCAACT+TGG - chr3_1:65387223-65387242 Msa0368610:intron 60.0%
! GTGGAGGAGTGTATGCGGAC+GGG - chr3_1:65387643-65387662 Msa0368610:intron 60.0%
! TGTGCCGACCCCATATACGC+CGG - chr3_1:65387753-65387772 Msa0368610:CDS 60.0%
CCGGGGCCACGAATGACAAC+TGG + chr3_1:65387205-65387224 None:intergenic 65.0%
GTTGTCATTCGTGGCCCCGG+TGG - chr3_1:65387205-65387224 Msa0368610:intron 65.0%
ATTCGTGGCCCCGGTGGAGT+TGG - chr3_1:65387211-65387230 Msa0368610:intron 65.0%
GTTGCCGACCAACTCCACCG+GGG + chr3_1:65387222-65387241 None:intergenic 65.0%
! GAGGAGTGTATGCGGACGGG+TGG - chr3_1:65387646-65387665 Msa0368610:intron 65.0%
TGGGGTCGGCACATCCTGAG+AGG + chr3_1:65387746-65387765 None:intergenic 65.0%
! GTGGCCCCGGTGGAGTTGGT+CGG - chr3_1:65387215-65387234 Msa0368610:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 65384973 65388189 65384973 ID=Msa0368610;Name=Msa0368610
chr3_1 mRNA 65384973 65388189 65384973 ID=Msa0368610-mRNA-1;Parent=Msa0368610;Name=Msa0368610-mRNA-1;_AED=0.03;_eAED=0.03;_QI=194|1|1|1|1|1|4|370|393
chr3_1 exon 65384973 65386291 65384973 ID=Msa0368610-mRNA-1:exon:13092;Parent=Msa0368610-mRNA-1
chr3_1 exon 65387569 65387606 65387569 ID=Msa0368610-mRNA-1:exon:13091;Parent=Msa0368610-mRNA-1
chr3_1 exon 65387687 65387808 65387687 ID=Msa0368610-mRNA-1:exon:13090;Parent=Msa0368610-mRNA-1
chr3_1 exon 65387923 65388189 65387923 ID=Msa0368610-mRNA-1:exon:13089;Parent=Msa0368610-mRNA-1
chr3_1 five_prime_UTR 65387996 65388189 65387996 ID=Msa0368610-mRNA-1:five_prime_utr;Parent=Msa0368610-mRNA-1
chr3_1 CDS 65387923 65387995 65387923 ID=Msa0368610-mRNA-1:cds;Parent=Msa0368610-mRNA-1
chr3_1 CDS 65387687 65387808 65387687 ID=Msa0368610-mRNA-1:cds;Parent=Msa0368610-mRNA-1
chr3_1 CDS 65387569 65387606 65387569 ID=Msa0368610-mRNA-1:cds;Parent=Msa0368610-mRNA-1
chr3_1 CDS 65385343 65386291 65385343 ID=Msa0368610-mRNA-1:cds;Parent=Msa0368610-mRNA-1
chr3_1 three_prime_UTR 65384973 65385342 65384973 ID=Msa0368610-mRNA-1:three_prime_utr;Parent=Msa0368610-mRNA-1
Gene Sequence

>Msa0368610

ATGGCGACCCTTTTCCAAGCATTGGGAGCTGCTGTTACCCCTTTGTCTCCATCCAATTCCTTTCAATCCAAAGAGAGGAAAGGTAGCAGCATTTTTGTTGTCAGATCATCTGATGCAAAGGTGAATCAGGTTGTTTTGAAATCAGGAGGAGCAACTCGTAAGGGTGGTGAATTGTTGATTCCTAATGCAGTTGCAGGAAGCAGTTCCGTGGCTTCTGCGGCCTCAAAACCTGGGCATGAACTTCTCCTTTTTGAAGCCCTCCGTGAAGGTTTGGAAGAAGAAATGGAAAGGGATCCTTGTGTTTGTGTTATGGGCGAAGATGTAGGTCATTATGGAGGATCTTACAAGGTGACTAGAAACCTAGCTGAAAAGTTTGGTGACCTCAGAGTCTTGGACACCCCTATTGCTGAGAACGCCTTCACTGGAATGGGCATTGGAGCTGCCATGACTGGTCTGAGGCCAACCATTGAGGGCATGAACATGGGATTTCTACTTCTGGCATTTAACCAAATCTCTAACAATTGTGGAATGCTGCATTACACATCCGGAGGTCAGTTTAAAATACCAGTTGTCATTCGTGGCCCCGGTGGAGTTGGTCGGCAACTTGGAGCAGAACACTCACAGCGTTTGGAATCGTATTTTCAATCAATCCCTGGTATTCAGATGGTGGCTTGTTCAACACCTTACAACGCCAAGGGCTTGATGAAAGCTGCGATTCGAAGTGACAACCCTGTGATACTTTTTGAGCATGTTTTGCTTTATAACCTCAAGGAAAGAATTCCAGATGAAGAGTATGTATTGTCACTTGAAGAAGCTGAGATGGTTAGGCCTGGTGAGCATGTCACAATATTAACTTATTCGAGGATGAGGTATCATGTCATGCAAGCTGCCAAGACATTAGTGAACAAGGGGTATGACCCTGAAGTAATTGACATCAGGTCTTTGAAACCATTTGATCTTCACACAATTGGGAATTCAATAAAAAAGACGCATCGGGTTCTCATAGTGGAGGAGTGTATGCGGACGGGTGGAATTGGCGCTAGTCTGACAGCTGCCATTACTGAAAATTTCCATGACTATTTGGATGCTCCTATCATATGTTTATCCTCTCAGGATGTGCCGACCCCATATACGCCGGAACATTGGAAGAATGGACAGTGGTTCAACCTGCTCAAATTGTGA
Protein sequence

>Msa0368610

MATLFQALGAAVTPLSPSNSFQSKERKGSSIFVVRSSDAKVNQVVLKSGGATRKGGELLIPNAVAGSSSVASAASKPGHELLLFEALREGLEEEMERDPCVCVMGEDVGHYGGSYKVTRNLAEKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPTIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSDNPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIICLSSQDVPTPYTPEHWKNGQWFNLLKL*