AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0510710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510710 MtrunA17_Chr3g0116801 98.263 403 7 0 1 403 1 403 0.0 820
Msa0510710 MtrunA17_Chr8g0376411 91.787 414 13 6 1 403 1 404 0.0 742
Msa0510710 MtrunA17_Chr7g0214101 40.785 331 192 1 77 403 22 352 1.09e-87 270
Msa0510710 MtrunA17_Chr4g0009631 36.825 315 187 5 74 378 29 341 4.26e-59 196
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510710 AT2G34590.1 82.555 407 66 3 1 403 1 406 0.0 685
Msa0510710 AT1G30120.1 80.630 413 63 4 1 403 1 406 0.0 677
Msa0510710 AT5G50850.1 40.979 327 189 1 80 402 33 359 1.73e-88 272
Msa0510710 AT1G55510.1 37.143 315 192 4 66 378 18 328 2.23e-61 202
Msa0510710 AT3G13450.1 37.097 310 192 3 71 378 26 334 1.14e-60 200

Find 157 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATTTCCATGACTATT+TGG 0.148797 3_4:+59850075 Msa0510710:CDS
CACAACCTTATATTGATATT+TGG 0.155164 3_4:+59850350 Msa0510710:three_prime_UTR
TCAAATTATTGCCCAGTTCT+AGG 0.196984 3_4:-59850412 None:intergenic
ACTGCGAAGACACGGTTAAT+TGG 0.227764 3_4:+59850222 Msa0510710:three_prime_UTR
TTCCACAATTGTTAGAGATT+TGG 0.278564 3_4:-59849520 None:intergenic
GAAATCGGGCGGAGAAATTA+AGG 0.281257 3_4:-59847452 None:intergenic
TCTTCCAATGTTCCGGCATA+TGG 0.282740 3_4:-59850139 None:intergenic
CCATTTGATCTTCACACAAT+TGG 0.288971 3_4:+59849962 Msa0510710:CDS
ACCTTTGGATTGAAAGGAAT+TGG 0.294117 3_4:-59847586 None:intergenic
GATGAATAATCTAGTTTAAC+TGG 0.303371 3_4:-59850277 None:intergenic
GCTTCTGCGGCCTCAAAACC+TGG 0.328330 3_4:+59847968 Msa0510710:CDS
GGCGAAGATGTAGGTCATTA+TGG 0.341430 3_4:+59849326 Msa0510710:CDS
GGATCCTTGTGTTTGTGTTA+TGG 0.347565 3_4:+59849304 Msa0510710:CDS
ATAAACCAAATATCAATATA+AGG 0.354174 3_4:-59850355 None:intergenic
GACCTGATGTCAATTACTTC+AGG 0.354470 3_4:-59849932 None:intergenic
TAACTTACTGCAACTGCATT+AGG 0.356093 3_4:-59847828 None:intergenic
AGCAGAACACTCACAGCGTT+TGG 0.367856 3_4:+59849622 Msa0510710:CDS
GATCCTTGTGTTTGTGTTAT+GGG 0.370683 3_4:+59849305 Msa0510710:CDS
ATCTGATGCAAAGGTGAATC+AGG 0.372852 3_4:+59847755 Msa0510710:CDS
TGTCCATTCTTCCAATGTTC+CGG 0.376343 3_4:-59850146 None:intergenic
ATGCTGAAGTTATCTGTTAT+AGG 0.377475 3_4:+59850439 Msa0510710:three_prime_UTR
CATTTGATCTTCACACAATT+GGG 0.378344 3_4:+59849963 Msa0510710:CDS
CCAATTGTGTGAAGATCAAA+TGG 0.384655 3_4:-59849962 None:intergenic
TTTATCTCACTTGTATTGTA+TGG 0.388097 3_4:+59850473 Msa0510710:three_prime_UTR
CTTCACGGAGGGCTTCAAAA+AGG 0.390509 3_4:-59849259 None:intergenic
TTTCTATGAAGAAATGAAAT+CGG 0.393438 3_4:-59847467 None:intergenic
GTGAAGGCGTTCTCAGCAAT+AGG 0.393983 3_4:-59849413 None:intergenic
CTGCGAAGACACGGTTAATT+GGG 0.406484 3_4:+59850223 Msa0510710:three_prime_UTR
TGTATGCGGACGGGTGGAAT+TGG 0.407666 3_4:+59850028 Msa0510710:CDS
GAACATGGGATTTCTACTTC+TGG 0.411008 3_4:+59849490 Msa0510710:CDS
GACAATACATACTCTTCATC+TGG 0.412124 3_4:-59849794 None:intergenic
ATCAAGCCCTTGGCGTTGTA+AGG 0.414249 3_4:-59849695 None:intergenic
TGAAGGTTTGGAAGAAGAAA+TGG 0.415831 3_4:+59849277 Msa0510710:CDS
TGAAGCCCTCCGTGAAGGTT+TGG 0.426813 3_4:+59849265 Msa0510710:CDS
TGAAGGCGTTCTCAGCAATA+GGG 0.426997 3_4:-59849412 None:intergenic
CAGCTCCCAATGCTTGGAAA+AGG 0.429441 3_4:-59847542 None:intergenic
AGAAACCTAGCTGAAAAGTT+TGG 0.429473 3_4:+59849368 Msa0510710:CDS
CTTCCAATGTTCCGGCATAT+GGG 0.437477 3_4:-59850138 None:intergenic
TATCATATGTTTATCCTCTC+AGG 0.437493 3_4:+59850105 Msa0510710:CDS
ATTCGGGTGAGCCCTAGAAC+TGG 0.438393 3_4:+59850400 Msa0510710:three_prime_UTR
TTGAAGAAGCTGAGATGGTT+AGG 0.438904 3_4:+59849819 Msa0510710:CDS
AAAATACCAGTTGTCATTCG+TGG 0.440767 3_4:+59849572 Msa0510710:CDS
GGCATTGGAGCTGCCATGAC+TGG 0.441530 3_4:+59849443 Msa0510710:CDS
GAAAAGGGTCGCCATTGGAT+TGG 0.443875 3_4:-59847526 None:intergenic
CGCAGCTTTCATCAAGCCCT+TGG 0.454591 3_4:-59849705 None:intergenic
TGAGAGGATAAACATATGAT+AGG 0.455116 3_4:-59850103 None:intergenic
TTTCTTCTTCCAAACCTTCA+CGG 0.456792 3_4:-59849274 None:intergenic
GATGAGAAGAATGGAAATGA+AGG 0.457032 3_4:-59847494 None:intergenic
CGTGTCTTCGCAGTAATCAT+TGG 0.459156 3_4:-59850213 None:intergenic
CAAATTATTGCCCAGTTCTA+GGG 0.460728 3_4:-59850411 None:intergenic
ACCCTGAAGTAATTGACATC+AGG 0.461035 3_4:+59849930 Msa0510710:CDS
GCCATTGGATTGGATTGGAT+TGG 0.461174 3_4:-59847516 None:intergenic
CAAGCCACCATCTGAATACC+AGG 0.461946 3_4:-59849665 None:intergenic
CCCCTTGTTCACTAATGTCT+TGG 0.463054 3_4:-59849903 None:intergenic
TCCAATTCCTTTCAATCCAA+AGG 0.466235 3_4:+59847585 Msa0510710:CDS
AAACAAACCTTTGGATTGAA+AGG 0.467045 3_4:-59847592 None:intergenic
ATTGCTGAGAACGCCTTCAC+TGG 0.467578 3_4:+59849416 Msa0510710:CDS
GAGAACGCCTTCACTGGAAT+GGG 0.477855 3_4:+59849422 Msa0510710:CDS
ATTCGTGGCCCCGGTGGAGT+TGG 0.478046 3_4:+59849587 Msa0510710:CDS
GGGTCGCCATTGGATTGGAT+TGG 0.479800 3_4:-59847521 None:intergenic
TGTGTTCTAATTCTAATGTC+TGG 0.484277 3_4:+59850537 Msa0510710:three_prime_UTR
CCGGGGCCACGAATGACAAC+TGG 0.484379 3_4:-59849578 None:intergenic
GCCTTCACTGGAATGGGCAT+TGG 0.484563 3_4:+59849428 Msa0510710:CDS
GTTTGGTGACCTCAGAGTCT+TGG 0.486909 3_4:+59849385 Msa0510710:CDS
GGTGGAGTTGGTCGGCAACT+TGG 0.489359 3_4:+59849599 Msa0510710:CDS
AAGTTGCCGACCAACTCCAC+CGG 0.491956 3_4:-59849597 None:intergenic
GAACTGGGCAATAATTTGAA+TGG 0.492168 3_4:+59850416 Msa0510710:three_prime_UTR
TGAGAACGCCTTCACTGGAA+TGG 0.492235 3_4:+59849421 Msa0510710:CDS
TAACAGCAGCTCCCAATGCT+TGG 0.497792 3_4:-59847548 None:intergenic
GGTCTGAGGCCAACCATTGA+GGG 0.502439 3_4:+59849464 Msa0510710:CDS
TCCCATGTTCATGCCCTCAA+TGG 0.502558 3_4:-59849477 None:intergenic
AGCTCCCAATGCTTGGAAAA+GGG 0.505657 3_4:-59847541 None:intergenic
GCTTGGAAAAGGGTCGCCAT+TGG 0.506284 3_4:-59847531 None:intergenic
TTGGATTGAAAGGAATTGGA+TGG 0.506432 3_4:-59847582 None:intergenic
AGGAATTGGATGGAGACAAA+GGG 0.507813 3_4:-59847572 None:intergenic
TCACAATATTAACTTATTCG+AGG 0.508951 3_4:+59849855 Msa0510710:CDS
ATTGGATTGGATGAGAAGAA+TGG 0.509301 3_4:-59847503 None:intergenic
ATGCCGGAACATTGGAAGAA+TGG 0.510194 3_4:+59850143 Msa0510710:CDS
TTCTATGAAGAAATGAAATC+GGG 0.511349 3_4:-59847466 None:intergenic
AGTTGCCGACCAACTCCACC+GGG 0.512106 3_4:-59849596 None:intergenic
ACCTGATGTCAATTACTTCA+GGG 0.512110 3_4:-59849931 None:intergenic
AACCAAATCTCTAACAATTG+TGG 0.513777 3_4:+59849518 Msa0510710:CDS
AACCATTGAGGGCATGAACA+TGG 0.515181 3_4:+59849475 Msa0510710:CDS
GACGCATCGGGTTCTCATAG+TGG 0.516325 3_4:+59850000 Msa0510710:CDS
ATGAGACGGAGGGAGCTTGT+TGG 0.520529 3_4:+59847336 Msa0510710:five_prime_UTR
CATCTGGAATTCTTTCCTTG+AGG 0.526335 3_4:-59849778 None:intergenic
GACCCCATATGCCGGAACAT+TGG 0.530700 3_4:+59850135 Msa0510710:CDS
TTCTTCCAAACCTTCACGGA+GGG 0.533768 3_4:-59849270 None:intergenic
ATCAGGAGGAGCAACTCGTA+AGG 0.536409 3_4:+59847788 Msa0510710:CDS
TATTAACTTATTCGAGGATG+AGG 0.538579 3_4:+59849861 Msa0510710:CDS
AATATTGTGACATGCTCACC+AGG 0.538755 3_4:-59849842 None:intergenic
GGAATGCTGCATTACACATC+CGG 0.540625 3_4:+59849539 Msa0510710:CDS
ATGTTCATGCCCTCAATGGT+TGG 0.542895 3_4:-59849473 None:intergenic
GTCACTTGAAGAAGCTGAGA+TGG 0.543358 3_4:+59849814 Msa0510710:CDS
CAAATATCAATATAAGGTTG+TGG 0.543535 3_4:-59850349 None:intergenic
ACTGCAGTCACAATTTGAGC+AGG 0.546350 3_4:-59850178 None:intergenic
TCCAATGCCCATTCCAGTGA+AGG 0.550685 3_4:-59849429 None:intergenic
CCAGTTGTCATTCGTGGCCC+CGG 0.551669 3_4:+59849578 Msa0510710:CDS
TGCCAAGACATTAGTGAACA+AGG 0.551975 3_4:+59849901 Msa0510710:CDS
TGGTCTGAGGCCAACCATTG+AGG 0.554354 3_4:+59849463 Msa0510710:CDS
GTGGAGGAGTGTATGCGGAC+GGG 0.556919 3_4:+59850019 Msa0510710:CDS
GTGGCCCCGGTGGAGTTGGT+CGG 0.557377 3_4:+59849591 Msa0510710:CDS
TTCCAATGTTCCGGCATATG+GGG 0.562829 3_4:-59850137 None:intergenic
TTCAACACCTTACAACGCCA+AGG 0.564472 3_4:+59849688 Msa0510710:CDS
AAGGAATTGGATGGAGACAA+AGG 0.566066 3_4:-59847573 None:intergenic
GGTTGGCCTCAGACCAGTCA+TGG 0.570730 3_4:-59849456 None:intergenic
TGTGTTATGGGCGAAGATGT+AGG 0.571870 3_4:+59849317 Msa0510710:CDS
GTTTGGAAGAAGAAATGGAA+AGG 0.572313 3_4:+59849282 Msa0510710:CDS
TTCGGGTGAGCCCTAGAACT+GGG 0.575492 3_4:+59850401 Msa0510710:three_prime_UTR
AAGCAGTTCCGTGGCTTCTG+CGG 0.579023 3_4:+59847955 Msa0510710:CDS
ATCAATCCCTGGTATTCAGA+TGG 0.579633 3_4:+59849658 Msa0510710:CDS
GATGTGCCGACCCCATATGC+CGG 0.583311 3_4:+59850127 Msa0510710:CDS
TTTGGAAGAAGAAATGGAAA+GGG 0.583683 3_4:+59849283 Msa0510710:CDS
ACCATTGAGGGCATGAACAT+GGG 0.585824 3_4:+59849476 Msa0510710:CDS
TAGGAGCATCCAAATAGTCA+TGG 0.589072 3_4:-59850084 None:intergenic
AATGTTCCGGCATATGGGGT+CGG 0.590967 3_4:-59850133 None:intergenic
TCCAATCCAATCCAATCCAA+TGG 0.600546 3_4:+59847515 Msa0510710:exon
AGTGGAGGAGTGTATGCGGA+CGG 0.600689 3_4:+59850018 Msa0510710:CDS
GAGGAGTGTATGCGGACGGG+TGG 0.604447 3_4:+59850022 Msa0510710:CDS
ATATCAATATAAGGTTGTGG+TGG 0.604837 3_4:-59850346 None:intergenic
TCAACACCTTACAACGCCAA+GGG 0.608126 3_4:+59849689 Msa0510710:CDS
TAACCGATTTCAGAGAGGAA+AGG 0.609166 3_4:+59847708 Msa0510710:intron
GCCAAGACATTAGTGAACAA+GGG 0.615498 3_4:+59849902 Msa0510710:CDS
GACAAATAAAATGAGACGGA+GGG 0.618211 3_4:+59847326 None:intergenic
TGTTTGTTGTTGAGTACCGC+TGG 0.623664 3_4:-59847411 None:intergenic
CTTCTGCGGCCTCAAAACCT+GGG 0.625772 3_4:+59847969 Msa0510710:CDS
TCAGGAGGAGCAACTCGTAA+GGG 0.626298 3_4:+59847789 Msa0510710:CDS
GGAATTGGATGGAGACAAAG+GGG 0.627837 3_4:-59847571 None:intergenic
GAAGGCGTTCTCAGCAATAG+GGG 0.627917 3_4:-59849411 None:intergenic
AGAGGACAAATAAAATGAGA+CGG 0.627922 3_4:+59847322 None:intergenic
TCATTATGGAGGATCTTACA+AGG 0.628639 3_4:+59849340 Msa0510710:CDS
GAAGCTGAGATGGTTAGGCC+TGG 0.629301 3_4:+59849824 Msa0510710:CDS
CCAAGACATTAGTGAACAAG+GGG 0.633005 3_4:+59849903 Msa0510710:CDS
AATCCCTGGTATTCAGATGG+TGG 0.638274 3_4:+59849661 Msa0510710:CDS
ATGAGAAGAATGGAAATGAA+GGG 0.639054 3_4:-59847493 None:intergenic
GAGCTGCCATGACTGGTCTG+AGG 0.641109 3_4:+59849450 Msa0510710:CDS
CAATGATTACTGCGAAGACA+CGG 0.642599 3_4:+59850214 Msa0510710:exon
GGACAAATAAAATGAGACGG+AGG 0.648207 3_4:+59847325 None:intergenic
GACACAGGGAAGCAGTTCCG+TGG 0.650688 3_4:+59847946 Msa0510710:intron
TATGAAGAAATGAAATCGGG+CGG 0.658445 3_4:-59847463 None:intergenic
GGAGGAGCAACTCGTAAGGG+TGG 0.658892 3_4:+59847792 Msa0510710:CDS
GTTGTCATTCGTGGCCCCGG+TGG 0.664280 3_4:+59849581 Msa0510710:CDS
TCATAGTGGAGGAGTGTATG+CGG 0.664859 3_4:+59850014 Msa0510710:CDS
GCATCGGGTTCTCATAGTGG+AGG 0.665664 3_4:+59850003 Msa0510710:CDS
TTTGTATGTTTATAGACACA+GGG 0.668118 3_4:+59847932 Msa0510710:intron
CTTCTTCCAAACCTTCACGG+AGG 0.668917 3_4:-59849271 None:intergenic
TGTCAGATCATCTGATGCAA+AGG 0.673345 3_4:+59847746 Msa0510710:CDS
CATATAGTTACTAGTACCAG+CGG 0.674277 3_4:+59847395 Msa0510710:five_prime_UTR
TAGGGGTGTCCAAGACTCTG+AGG 0.678864 3_4:-59849394 None:intergenic
TGGGGTCGGCACATCCTGAG+AGG 0.680395 3_4:-59850119 None:intergenic
ATGCTGCATTACACATCCGG+AGG 0.700382 3_4:+59849542 Msa0510710:CDS
GTTTAACTGGACTAACACAA+CGG 0.711671 3_4:-59850264 None:intergenic
GAAGATGTAGGTCATTATGG+AGG 0.718502 3_4:+59849329 Msa0510710:CDS
TCGCCCATAACACAAACACA+AGG 0.727801 3_4:-59849308 None:intergenic
AACATTGGAAGAATGGACAG+TGG 0.729198 3_4:+59850150 Msa0510710:CDS
AAGCCACCATCTGAATACCA+GGG 0.729816 3_4:-59849664 None:intergenic
GTTGCCGACCAACTCCACCG+GGG 0.782401 3_4:-59849595 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGATTTTATTGTAATTTT+AGG - chr3_4:59848131-59848150 None:intergenic 10.0%
!!! ATTGTGTTTGATTTTTAAAA+AGG - chr3_4:59848182-59848201 None:intergenic 15.0%
!! ATCACAAAATAAAATAGAAA+AGG - chr3_4:59848534-59848553 None:intergenic 15.0%
!! TTAGAAAATGTAATGAAATA+TGG + chr3_4:59848706-59848725 Msa0510710:intron 15.0%
!! ATAAACCAAATATCAATATA+AGG - chr3_4:59850358-59850377 None:intergenic 15.0%
!! TTTCTATGAAGAAATGAAAT+CGG - chr3_4:59847470-59847489 None:intergenic 20.0%
!!! ATAAACTTGTTTTTTGATGT+TGG + chr3_4:59847644-59847663 Msa0510710:intron 20.0%
!!! TAAACTTGTTTTTTGATGTT+GGG + chr3_4:59847645-59847664 Msa0510710:intron 20.0%
!!! TTGTAATTTTAGGAAGAAAA+GGG - chr3_4:59848121-59848140 None:intergenic 20.0%
!!! ATTGTAATTTTAGGAAGAAA+AGG - chr3_4:59848122-59848141 None:intergenic 20.0%
!! AAAATCTAATATATTCGATC+CGG + chr3_4:59848142-59848161 Msa0510710:intron 20.0%
!!! TGTTTTCTCAAAGTATAAAA+TGG + chr3_4:59848490-59848509 Msa0510710:intron 20.0%
!!! ATTTTATTTTGTGATGAACA+AGG + chr3_4:59848539-59848558 Msa0510710:intron 20.0%
!!! AAATGTTAAATTTTTGTGCA+AGG + chr3_4:59848936-59848955 Msa0510710:intron 20.0%
!!! CATTTTTTTTTCTCTCTTAT+TGG + chr3_4:59849098-59849117 Msa0510710:intron 20.0%
!!! GTTAATTGGGATATTTTTTT+TGG + chr3_4:59850236-59850255 Msa0510710:three_prime_UTR 20.0%
!! AAGTGAGATAAAAACAAAAA+AGG - chr3_4:59850465-59850484 None:intergenic 20.0%
!!! GTTATTTTAGTAGTACAATG+TGG + chr3_4:59847358-59847377 Msa0510710:five_prime_UTR 25.0%
! TTCTATGAAGAAATGAAATC+GGG - chr3_4:59847469-59847488 None:intergenic 25.0%
! TTGCATAAAAAACAAACCTT+TGG - chr3_4:59847604-59847623 None:intergenic 25.0%
! TTTGTATGTTTATAGACACA+GGG + chr3_4:59847932-59847951 Msa0510710:intron 25.0%
!!! AGTCAATTTAGTTCATCTTT+TGG + chr3_4:59848455-59848474 Msa0510710:intron 25.0%
! TTCTAAATTAAGATATCCTC+CGG - chr3_4:59848692-59848711 None:intergenic 25.0%
! ATAAAAAAAAATGCCAACAC+AGG - chr3_4:59849152-59849171 None:intergenic 25.0%
!!! GTGTTGGCATTTTTTTTTAT+TGG + chr3_4:59849152-59849171 Msa0510710:intron 25.0%
! ATTGAATAGTTATGACCAAT+AGG + chr3_4:59849183-59849202 Msa0510710:intron 25.0%
! TCACAATATTAACTTATTCG+AGG + chr3_4:59849855-59849874 Msa0510710:CDS 25.0%
! ATTCAATAAAAAAGACGCAT+CGG + chr3_4:59849987-59850006 Msa0510710:CDS 25.0%
! TGAAAATTTCCATGACTATT+TGG + chr3_4:59850075-59850094 Msa0510710:CDS 25.0%
!! GATGAATAATCTAGTTTAAC+TGG - chr3_4:59850280-59850299 None:intergenic 25.0%
! CAAATATCAATATAAGGTTG+TGG - chr3_4:59850352-59850371 None:intergenic 25.0%
! CACAACCTTATATTGATATT+TGG + chr3_4:59850350-59850369 Msa0510710:three_prime_UTR 25.0%
!!! CGTTTGAGTTTTTTTAGATT+CGG + chr3_4:59850383-59850402 Msa0510710:three_prime_UTR 25.0%
!!! GTTTGAGTTTTTTTAGATTC+GGG + chr3_4:59850384-59850403 Msa0510710:three_prime_UTR 25.0%
! TTTATCTCACTTGTATTGTA+TGG + chr3_4:59850473-59850492 Msa0510710:three_prime_UTR 25.0%
ATGAGAAGAATGGAAATGAA+GGG - chr3_4:59847496-59847515 None:intergenic 30.0%
AAACAAACCTTTGGATTGAA+AGG - chr3_4:59847595-59847614 None:intergenic 30.0%
!!! CAATCTATCGCTCTTATTTT+TGG + chr3_4:59847621-59847640 Msa0510710:intron 30.0%
!!! AATCAGGTTGTTTTGAAATC+AGG + chr3_4:59847771-59847790 Msa0510710:CDS 30.0%
AATTACACAGAAATGTGGAA+TGG - chr3_4:59847872-59847891 None:intergenic 30.0%
GTTTGTATGTTTATAGACAC+AGG + chr3_4:59847931-59847950 Msa0510710:intron 30.0%
ACATAACAAGAAGTGATTGT+AGG - chr3_4:59848005-59848024 None:intergenic 30.0%
CTAAAAAGGTAAGGAAGTTT+AGG - chr3_4:59848328-59848347 None:intergenic 30.0%
! CTAAACTTCCTTACCTTTTT+AGG + chr3_4:59848326-59848345 Msa0510710:intron 30.0%
TCTTTACACCTAAAAAGGTA+AGG - chr3_4:59848337-59848356 None:intergenic 30.0%
!!! CTTTTTAGGTGTAAAGAATG+CGG + chr3_4:59848340-59848359 Msa0510710:intron 30.0%
!!! TTTTTAGGTGTAAAGAATGC+GGG + chr3_4:59848341-59848360 Msa0510710:intron 30.0%
!!! GATGTATTGTTGTTTTCAGA+TGG - chr3_4:59848573-59848592 None:intergenic 30.0%
TTGGTATTGCATACATAGAA+AGG - chr3_4:59848629-59848648 None:intergenic 30.0%
TCCCATATGTTAGAAATATC+CGG + chr3_4:59848670-59848689 Msa0510710:intron 30.0%
! TCCGGATATTTCTAACATAT+GGG - chr3_4:59848674-59848693 None:intergenic 30.0%
!! CAATTTTGTTTGATGAAAGC+AGG - chr3_4:59848840-59848859 None:intergenic 30.0%
! TGAGTAAAAAAGCACACATA+TGG - chr3_4:59849031-59849050 None:intergenic 30.0%
TTTGGAAGAAGAAATGGAAA+GGG + chr3_4:59849283-59849302 Msa0510710:CDS 30.0%
AACCAAATCTCTAACAATTG+TGG + chr3_4:59849518-59849537 Msa0510710:CDS 30.0%
TTCCACAATTGTTAGAGATT+TGG - chr3_4:59849523-59849542 None:intergenic 30.0%
! TGTTTTGCTTTATAACCTCA+AGG + chr3_4:59849763-59849782 Msa0510710:CDS 30.0%
TATTAACTTATTCGAGGATG+AGG + chr3_4:59849861-59849880 Msa0510710:CDS 30.0%
CATTTGATCTTCACACAATT+GGG + chr3_4:59849963-59849982 Msa0510710:CDS 30.0%
TTCAATAAAAAAGACGCATC+GGG + chr3_4:59849988-59850007 Msa0510710:CDS 30.0%
! GTCATGGAAATTTTCAGTAA+TGG - chr3_4:59850071-59850090 None:intergenic 30.0%
TGAGAGGATAAACATATGAT+AGG - chr3_4:59850106-59850125 None:intergenic 30.0%
TATCATATGTTTATCCTCTC+AGG + chr3_4:59850105-59850124 Msa0510710:CDS 30.0%
ATATCAATATAAGGTTGTGG+TGG - chr3_4:59850349-59850368 None:intergenic 30.0%
ATGCTGAAGTTATCTGTTAT+AGG + chr3_4:59850439-59850458 Msa0510710:three_prime_UTR 30.0%
TGTGTTCTAATTCTAATGTC+TGG + chr3_4:59850537-59850556 Msa0510710:three_prime_UTR 30.0%
CATATAGTTACTAGTACCAG+CGG + chr3_4:59847395-59847414 Msa0510710:five_prime_UTR 35.0%
TATGAAGAAATGAAATCGGG+CGG - chr3_4:59847466-59847485 None:intergenic 35.0%
GATGAGAAGAATGGAAATGA+AGG - chr3_4:59847497-59847516 None:intergenic 35.0%
! ATTGGATTGGATGAGAAGAA+TGG - chr3_4:59847506-59847525 None:intergenic 35.0%
TTGGATTGAAAGGAATTGGA+TGG - chr3_4:59847585-59847604 None:intergenic 35.0%
TCCAATTCCTTTCAATCCAA+AGG + chr3_4:59847585-59847604 Msa0510710:CDS 35.0%
ACCTTTGGATTGAAAGGAAT+TGG - chr3_4:59847589-59847608 None:intergenic 35.0%
!! TTTTGTAACCGATTTCAGAG+AGG + chr3_4:59847703-59847722 Msa0510710:intron 35.0%
TAACTTACTGCAACTGCATT+AGG - chr3_4:59847831-59847850 None:intergenic 35.0%
GATGCAATTACACAGAAATG+TGG - chr3_4:59847877-59847896 None:intergenic 35.0%
ACAAGAAGTGATTGTAGGAT+AGG - chr3_4:59848000-59848019 None:intergenic 35.0%
CTACATGCCTTATATTCGAT+CGG + chr3_4:59848207-59848226 Msa0510710:intron 35.0%
TACATGCCTTATATTCGATC+GGG + chr3_4:59848208-59848227 Msa0510710:intron 35.0%
!!! GAATGTTTTTAGTGCATGCT+TGG + chr3_4:59848242-59848261 Msa0510710:intron 35.0%
!! TTTTTAGTGCATGCTTGGTT+TGG + chr3_4:59848247-59848266 Msa0510710:intron 35.0%
AAAGCTAAGCCTTGAAAAGA+AGG + chr3_4:59848278-59848297 Msa0510710:intron 35.0%
AAGCTAAGCCTTGAAAAGAA+GGG + chr3_4:59848279-59848298 Msa0510710:intron 35.0%
CGCATTCTTTACACCTAAAA+AGG - chr3_4:59848342-59848361 None:intergenic 35.0%
!! TTTTAGGTGTAAAGAATGCG+GGG + chr3_4:59848342-59848361 Msa0510710:intron 35.0%
AGTGAGATGTAATTAGTTCC+AGG + chr3_4:59848413-59848432 Msa0510710:intron 35.0%
ATTACATCACAACTACATCC+TGG - chr3_4:59848434-59848453 None:intergenic 35.0%
TCTAACATATGGGAAACAGA+TGG - chr3_4:59848664-59848683 None:intergenic 35.0%
! CTCCGGATATTTCTAACATA+TGG - chr3_4:59848675-59848694 None:intergenic 35.0%
CATATGTTAGAAATATCCGG+AGG + chr3_4:59848673-59848692 Msa0510710:intron 35.0%
ATATGGAAACAACTCCTGTA+TGG + chr3_4:59848723-59848742 Msa0510710:intron 35.0%
TCTAGACATTTCTACCATAC+AGG - chr3_4:59848740-59848759 None:intergenic 35.0%
TGTATGGTAGAAATGTCTAG+AGG + chr3_4:59848739-59848758 Msa0510710:intron 35.0%
GACACGATAGTGATATTATG+AGG + chr3_4:59848780-59848799 Msa0510710:intron 35.0%
CATTTAGAAGACTGAAAGCA+TGG - chr3_4:59848921-59848940 None:intergenic 35.0%
AATCCATGTTTCATGAGCAA+AGG + chr3_4:59848972-59848991 Msa0510710:intron 35.0%
ATCCATGTTTCATGAGCAAA+GGG + chr3_4:59848973-59848992 Msa0510710:intron 35.0%
!!! GCATAAGCTTTTGAAGTAGT+TGG + chr3_4:59849054-59849073 Msa0510710:intron 35.0%
! CTCTTATTGGTTGCATTGAT+TGG + chr3_4:59849111-59849130 Msa0510710:intron 35.0%
!! TTGCATTGATTGGTTGAAGT+TGG + chr3_4:59849121-59849140 Msa0510710:intron 35.0%
TGACCAATAGGCAATAACAA+TGG + chr3_4:59849195-59849214 Msa0510710:intron 35.0%
! ATGCCATTGTTATTGCCTAT+TGG - chr3_4:59849201-59849220 None:intergenic 35.0%
TTTCTTCTTCCAAACCTTCA+CGG - chr3_4:59849277-59849296 None:intergenic 35.0%
TGAAGGTTTGGAAGAAGAAA+TGG + chr3_4:59849277-59849296 Msa0510710:CDS 35.0%
GTTTGGAAGAAGAAATGGAA+AGG + chr3_4:59849282-59849301 Msa0510710:CDS 35.0%
GATCCTTGTGTTTGTGTTAT+GGG + chr3_4:59849305-59849324 Msa0510710:CDS 35.0%
TCATTATGGAGGATCTTACA+AGG + chr3_4:59849340-59849359 Msa0510710:CDS 35.0%
AGAAACCTAGCTGAAAAGTT+TGG + chr3_4:59849368-59849387 Msa0510710:CDS 35.0%
!! TGGTATTTTAAACTGACCTC+CGG - chr3_4:59849561-59849580 None:intergenic 35.0%
AAAATACCAGTTGTCATTCG+TGG + chr3_4:59849572-59849591 Msa0510710:CDS 35.0%
! TCGTATTTTCAATCAATCCC+TGG + chr3_4:59849647-59849666 Msa0510710:CDS 35.0%
!! CATGCTCAAAAAGTATCACA+GGG - chr3_4:59849745-59849764 None:intergenic 35.0%
!! ACATGCTCAAAAAGTATCAC+AGG - chr3_4:59849746-59849765 None:intergenic 35.0%
GACAATACATACTCTTCATC+TGG - chr3_4:59849797-59849816 None:intergenic 35.0%
ACCTGATGTCAATTACTTCA+GGG - chr3_4:59849934-59849953 None:intergenic 35.0%
CCAATTGTGTGAAGATCAAA+TGG - chr3_4:59849965-59849984 None:intergenic 35.0%
CCATTTGATCTTCACACAAT+TGG + chr3_4:59849962-59849981 Msa0510710:CDS 35.0%
GTTTAACTGGACTAACACAA+CGG - chr3_4:59850267-59850286 None:intergenic 35.0%
CAAATTATTGCCCAGTTCTA+GGG - chr3_4:59850414-59850433 None:intergenic 35.0%
TCAAATTATTGCCCAGTTCT+AGG - chr3_4:59850415-59850434 None:intergenic 35.0%
GAACTGGGCAATAATTTGAA+TGG + chr3_4:59850416-59850435 Msa0510710:three_prime_UTR 35.0%
TCCAATCCAATCCAATCCAA+TGG + chr3_4:59847515-59847534 Msa0510710:exon 40.0%
AGGAATTGGATGGAGACAAA+GGG - chr3_4:59847575-59847594 None:intergenic 40.0%
AAGGAATTGGATGGAGACAA+AGG - chr3_4:59847576-59847595 None:intergenic 40.0%
! TAACCGATTTCAGAGAGGAA+AGG + chr3_4:59847708-59847727 Msa0510710:intron 40.0%
!! CTACCTTTCCTCTCTGAAAT+CGG - chr3_4:59847714-59847733 None:intergenic 40.0%
TGTCAGATCATCTGATGCAA+AGG + chr3_4:59847746-59847765 Msa0510710:CDS 40.0%
ATCTGATGCAAAGGTGAATC+AGG + chr3_4:59847755-59847774 Msa0510710:CDS 40.0%
!!! CAGGTTGTTTTGAAATCAGG+AGG + chr3_4:59847774-59847793 Msa0510710:CDS 40.0%
CTAATATATTCGATCCGGAC+TGG + chr3_4:59848147-59848166 Msa0510710:intron 40.0%
AAAGGTTGTCAATTCCAGTC+CGG - chr3_4:59848164-59848183 None:intergenic 40.0%
TGAAGTCCCGATCGAATATA+AGG - chr3_4:59848217-59848236 None:intergenic 40.0%
TAAGCCTTGAAAAGAAGGGA+AGG + chr3_4:59848283-59848302 Msa0510710:intron 40.0%
! TAGGCTATGCTTCACTGTTT+TGG - chr3_4:59848309-59848328 None:intergenic 40.0%
!! CAGATGGATTTAGCTTGTGT+TGG - chr3_4:59848648-59848667 None:intergenic 40.0%
GTTTGATGAAAGCAGGAGAA+GGG - chr3_4:59848833-59848852 None:intergenic 40.0%
TGTTTGATGAAAGCAGGAGA+AGG - chr3_4:59848834-59848853 None:intergenic 40.0%
CAAACAAAATTGAGCCCTTG+TGG + chr3_4:59848848-59848867 Msa0510710:intron 40.0%
CGTGTCATGAATTACCACAA+GGG - chr3_4:59848865-59848884 None:intergenic 40.0%
CCTTGTGGTAATTCATGACA+CGG + chr3_4:59848863-59848882 Msa0510710:intron 40.0%
GGTAATTCATGACACGGTAT+TGG + chr3_4:59848869-59848888 Msa0510710:intron 40.0%
!! GAAGTTGGTAAAACCTGTGT+TGG + chr3_4:59849136-59849155 Msa0510710:intron 40.0%
AAAAGGAGAAGTTCATGCCT+GGG - chr3_4:59849245-59849264 None:intergenic 40.0%
AAAAAGGAGAAGTTCATGCC+TGG - chr3_4:59849246-59849265 None:intergenic 40.0%
GGATCCTTGTGTTTGTGTTA+TGG + chr3_4:59849304-59849323 Msa0510710:CDS 40.0%
GAAGATGTAGGTCATTATGG+AGG + chr3_4:59849329-59849348 Msa0510710:CDS 40.0%
GAACATGGGATTTCTACTTC+TGG + chr3_4:59849490-59849509 Msa0510710:CDS 40.0%
ATCAATCCCTGGTATTCAGA+TGG + chr3_4:59849658-59849677 Msa0510710:CDS 40.0%
! CATCTGGAATTCTTTCCTTG+AGG - chr3_4:59849781-59849800 None:intergenic 40.0%
TTGAAGAAGCTGAGATGGTT+AGG + chr3_4:59849819-59849838 Msa0510710:CDS 40.0%
AATATTGTGACATGCTCACC+AGG - chr3_4:59849845-59849864 None:intergenic 40.0%
TGCCAAGACATTAGTGAACA+AGG + chr3_4:59849901-59849920 Msa0510710:CDS 40.0%
GCCAAGACATTAGTGAACAA+GGG + chr3_4:59849902-59849921 Msa0510710:CDS 40.0%
CCAAGACATTAGTGAACAAG+GGG + chr3_4:59849903-59849922 Msa0510710:CDS 40.0%
ACCCTGAAGTAATTGACATC+AGG + chr3_4:59849930-59849949 Msa0510710:CDS 40.0%
GACCTGATGTCAATTACTTC+AGG - chr3_4:59849935-59849954 None:intergenic 40.0%
!! TAGGAGCATCCAAATAGTCA+TGG - chr3_4:59850087-59850106 None:intergenic 40.0%
TGTCCATTCTTCCAATGTTC+CGG - chr3_4:59850149-59850168 None:intergenic 40.0%
AACATTGGAAGAATGGACAG+TGG + chr3_4:59850150-59850169 Msa0510710:CDS 40.0%
CAATGATTACTGCGAAGACA+CGG + chr3_4:59850214-59850233 Msa0510710:exon 40.0%
!! TGTTTGTTGTTGAGTACCGC+TGG - chr3_4:59847414-59847433 None:intergenic 45.0%
GAAATCGGGCGGAGAAATTA+AGG - chr3_4:59847455-59847474 None:intergenic 45.0%
! GCCATTGGATTGGATTGGAT+TGG - chr3_4:59847519-59847538 None:intergenic 45.0%
AGCTCCCAATGCTTGGAAAA+GGG - chr3_4:59847544-59847563 None:intergenic 45.0%
GGAATTGGATGGAGACAAAG+GGG - chr3_4:59847574-59847593 None:intergenic 45.0%
! TAGGACATACCCAGGTTTTG+AGG - chr3_4:59847981-59848000 None:intergenic 45.0%
TTGTAGGATAGGACATACCC+AGG - chr3_4:59847989-59848008 None:intergenic 45.0%
!! TTGGCCTTCCCTTCTTTTCA+AGG - chr3_4:59848290-59848309 None:intergenic 45.0%
GCGTAAAATGTGCTTGTGCA+AGG - chr3_4:59848386-59848405 None:intergenic 45.0%
CCGTGTCATGAATTACCACA+AGG - chr3_4:59848866-59848885 None:intergenic 45.0%
AGCCCTTTGCTCATGAAACA+TGG - chr3_4:59848978-59848997 None:intergenic 45.0%
! CAGATGTGCATTTTGTTCCC+AGG + chr3_4:59849225-59849244 Msa0510710:intron 45.0%
TTCTTCCAAACCTTCACGGA+GGG - chr3_4:59849273-59849292 None:intergenic 45.0%
TCGCCCATAACACAAACACA+AGG - chr3_4:59849311-59849330 None:intergenic 45.0%
TGTGTTATGGGCGAAGATGT+AGG + chr3_4:59849317-59849336 Msa0510710:CDS 45.0%
GGCGAAGATGTAGGTCATTA+TGG + chr3_4:59849326-59849345 Msa0510710:CDS 45.0%
! GGTCACCAAACTTTTCAGCT+AGG - chr3_4:59849376-59849395 None:intergenic 45.0%
!! TGAAGGCGTTCTCAGCAATA+GGG - chr3_4:59849415-59849434 None:intergenic 45.0%
ATGTTCATGCCCTCAATGGT+TGG - chr3_4:59849476-59849495 None:intergenic 45.0%
! AACCATTGAGGGCATGAACA+TGG + chr3_4:59849475-59849494 Msa0510710:CDS 45.0%
! ACCATTGAGGGCATGAACAT+GGG + chr3_4:59849476-59849495 Msa0510710:CDS 45.0%
GGAATGCTGCATTACACATC+CGG + chr3_4:59849539-59849558 Msa0510710:CDS 45.0%
AATCCCTGGTATTCAGATGG+TGG + chr3_4:59849661-59849680 Msa0510710:CDS 45.0%
AAGCCACCATCTGAATACCA+GGG - chr3_4:59849667-59849686 None:intergenic 45.0%
TTCAACACCTTACAACGCCA+AGG + chr3_4:59849688-59849707 Msa0510710:CDS 45.0%
TCAACACCTTACAACGCCAA+GGG + chr3_4:59849689-59849708 Msa0510710:CDS 45.0%
GTCACTTGAAGAAGCTGAGA+TGG + chr3_4:59849814-59849833 Msa0510710:CDS 45.0%
CCCCTTGTTCACTAATGTCT+TGG - chr3_4:59849906-59849925 None:intergenic 45.0%
! TCATAGTGGAGGAGTGTATG+CGG + chr3_4:59850014-59850033 Msa0510710:CDS 45.0%
TTCCAATGTTCCGGCATATG+GGG - chr3_4:59850140-59850159 None:intergenic 45.0%
CTTCCAATGTTCCGGCATAT+GGG - chr3_4:59850141-59850160 None:intergenic 45.0%
TCTTCCAATGTTCCGGCATA+TGG - chr3_4:59850142-59850161 None:intergenic 45.0%
ATGCCGGAACATTGGAAGAA+TGG + chr3_4:59850143-59850162 Msa0510710:CDS 45.0%
ACTGCAGTCACAATTTGAGC+AGG - chr3_4:59850181-59850200 None:intergenic 45.0%
CGTGTCTTCGCAGTAATCAT+TGG - chr3_4:59850216-59850235 None:intergenic 45.0%
ACTGCGAAGACACGGTTAAT+TGG + chr3_4:59850222-59850241 Msa0510710:three_prime_UTR 45.0%
CTGCGAAGACACGGTTAATT+GGG + chr3_4:59850223-59850242 Msa0510710:three_prime_UTR 45.0%
GAAAAGGGTCGCCATTGGAT+TGG - chr3_4:59847529-59847548 None:intergenic 50.0%
! GCGACCCTTTTCCAAGCATT+GGG + chr3_4:59847537-59847556 Msa0510710:CDS 50.0%
CAGCTCCCAATGCTTGGAAA+AGG - chr3_4:59847545-59847564 None:intergenic 50.0%
TAACAGCAGCTCCCAATGCT+TGG - chr3_4:59847551-59847570 None:intergenic 50.0%
ATCAGGAGGAGCAACTCGTA+AGG + chr3_4:59847788-59847807 Msa0510710:CDS 50.0%
TCAGGAGGAGCAACTCGTAA+GGG + chr3_4:59847789-59847808 Msa0510710:CDS 50.0%
GTCCACTTAGTCACACTCAC+GGG - chr3_4:59848899-59848918 None:intergenic 50.0%
GGTCCACTTAGTCACACTCA+CGG - chr3_4:59848900-59848919 None:intergenic 50.0%
GGTTCATGACTATTCAGCGC+TGG + chr3_4:59849075-59849094 Msa0510710:intron 50.0%
CTTCACGGAGGGCTTCAAAA+AGG - chr3_4:59849262-59849281 None:intergenic 50.0%
!!! CTTTTTGAAGCCCTCCGTGA+AGG + chr3_4:59849260-59849279 Msa0510710:CDS 50.0%
CTTCTTCCAAACCTTCACGG+AGG - chr3_4:59849274-59849293 None:intergenic 50.0%
! GTTTGGTGACCTCAGAGTCT+TGG + chr3_4:59849385-59849404 Msa0510710:CDS 50.0%
!! GAAGGCGTTCTCAGCAATAG+GGG - chr3_4:59849414-59849433 None:intergenic 50.0%
!! GTGAAGGCGTTCTCAGCAAT+AGG - chr3_4:59849416-59849435 None:intergenic 50.0%
ATTGCTGAGAACGCCTTCAC+TGG + chr3_4:59849416-59849435 Msa0510710:CDS 50.0%
TGAGAACGCCTTCACTGGAA+TGG + chr3_4:59849421-59849440 Msa0510710:CDS 50.0%
GAGAACGCCTTCACTGGAAT+GGG + chr3_4:59849422-59849441 Msa0510710:CDS 50.0%
TCCAATGCCCATTCCAGTGA+AGG - chr3_4:59849432-59849451 None:intergenic 50.0%
TCCCATGTTCATGCCCTCAA+TGG - chr3_4:59849480-59849499 None:intergenic 50.0%
ATGCTGCATTACACATCCGG+AGG + chr3_4:59849542-59849561 Msa0510710:CDS 50.0%
AGCAGAACACTCACAGCGTT+TGG + chr3_4:59849622-59849641 Msa0510710:CDS 50.0%
CAAGCCACCATCTGAATACC+AGG - chr3_4:59849668-59849687 None:intergenic 50.0%
ATCAAGCCCTTGGCGTTGTA+AGG - chr3_4:59849698-59849717 None:intergenic 50.0%
AATGTTCCGGCATATGGGGT+CGG - chr3_4:59850136-59850155 None:intergenic 50.0%
ATGAGACGGAGGGAGCTTGT+TGG + chr3_4:59847336-59847355 Msa0510710:five_prime_UTR 55.0%
! GGGTCGCCATTGGATTGGAT+TGG - chr3_4:59847524-59847543 None:intergenic 55.0%
GCTTGGAAAAGGGTCGCCAT+TGG - chr3_4:59847534-59847553 None:intergenic 55.0%
! GGCGACCCTTTTCCAAGCAT+TGG + chr3_4:59847536-59847555 Msa0510710:CDS 55.0%
AAGCAGTTCCGTGGCTTCTG+CGG + chr3_4:59847955-59847974 Msa0510710:CDS 55.0%
!!! TTTTGAGGCCGCAGAAGCCA+CGG - chr3_4:59847966-59847985 None:intergenic 55.0%
CTTCTGCGGCCTCAAAACCT+GGG + chr3_4:59847969-59847988 Msa0510710:CDS 55.0%
CACCCGTGAGTGTGACTAAG+TGG + chr3_4:59848894-59848913 Msa0510710:intron 55.0%
GAGCAAAGGGCTCTTGCTTG+TGG + chr3_4:59848986-59849005 Msa0510710:intron 55.0%
CAAAGGGCTCTTGCTTGTGG+TGG + chr3_4:59848989-59849008 Msa0510710:intron 55.0%
TGAAGCCCTCCGTGAAGGTT+TGG + chr3_4:59849265-59849284 Msa0510710:CDS 55.0%
!! TAGGGGTGTCCAAGACTCTG+AGG - chr3_4:59849397-59849416 None:intergenic 55.0%
GCCTTCACTGGAATGGGCAT+TGG + chr3_4:59849428-59849447 Msa0510710:CDS 55.0%
! TGGTCTGAGGCCAACCATTG+AGG + chr3_4:59849463-59849482 Msa0510710:CDS 55.0%
! GGTCTGAGGCCAACCATTGA+GGG + chr3_4:59849464-59849483 Msa0510710:CDS 55.0%
AAGTTGCCGACCAACTCCAC+CGG - chr3_4:59849600-59849619 None:intergenic 55.0%
CGCAGCTTTCATCAAGCCCT+TGG - chr3_4:59849708-59849727 None:intergenic 55.0%
GAAGCTGAGATGGTTAGGCC+TGG + chr3_4:59849824-59849843 Msa0510710:CDS 55.0%
GACGCATCGGGTTCTCATAG+TGG + chr3_4:59850000-59850019 Msa0510710:CDS 55.0%
GCATCGGGTTCTCATAGTGG+AGG + chr3_4:59850003-59850022 Msa0510710:CDS 55.0%
! AGTGGAGGAGTGTATGCGGA+CGG + chr3_4:59850018-59850037 Msa0510710:CDS 55.0%
TGTATGCGGACGGGTGGAAT+TGG + chr3_4:59850028-59850047 Msa0510710:CDS 55.0%
GACCCCATATGCCGGAACAT+TGG + chr3_4:59850135-59850154 Msa0510710:CDS 55.0%
ATTCGGGTGAGCCCTAGAAC+TGG + chr3_4:59850400-59850419 Msa0510710:three_prime_UTR 55.0%
TTCGGGTGAGCCCTAGAACT+GGG + chr3_4:59850401-59850420 Msa0510710:three_prime_UTR 55.0%
GGAGGAGCAACTCGTAAGGG+TGG + chr3_4:59847792-59847811 Msa0510710:CDS 60.0%
GACACAGGGAAGCAGTTCCG+TGG + chr3_4:59847946-59847965 Msa0510710:intron 60.0%
GCTTCTGCGGCCTCAAAACC+TGG + chr3_4:59847968-59847987 Msa0510710:CDS 60.0%
! GGCATTGGAGCTGCCATGAC+TGG + chr3_4:59849443-59849462 Msa0510710:CDS 60.0%
!! GAGCTGCCATGACTGGTCTG+AGG + chr3_4:59849450-59849469 Msa0510710:CDS 60.0%
!! GGTTGGCCTCAGACCAGTCA+TGG - chr3_4:59849459-59849478 None:intergenic 60.0%
CCAGTTGTCATTCGTGGCCC+CGG + chr3_4:59849578-59849597 Msa0510710:CDS 60.0%
AGTTGCCGACCAACTCCACC+GGG - chr3_4:59849599-59849618 None:intergenic 60.0%
! GGTGGAGTTGGTCGGCAACT+TGG + chr3_4:59849599-59849618 Msa0510710:CDS 60.0%
! GTGGAGGAGTGTATGCGGAC+GGG + chr3_4:59850019-59850038 Msa0510710:CDS 60.0%
! GATGTGCCGACCCCATATGC+CGG + chr3_4:59850127-59850146 Msa0510710:CDS 60.0%
CCGGGGCCACGAATGACAAC+TGG - chr3_4:59849581-59849600 None:intergenic 65.0%
GTTGTCATTCGTGGCCCCGG+TGG + chr3_4:59849581-59849600 Msa0510710:CDS 65.0%
ATTCGTGGCCCCGGTGGAGT+TGG + chr3_4:59849587-59849606 Msa0510710:CDS 65.0%
GTTGCCGACCAACTCCACCG+GGG - chr3_4:59849598-59849617 None:intergenic 65.0%
! GAGGAGTGTATGCGGACGGG+TGG + chr3_4:59850022-59850041 Msa0510710:CDS 65.0%
TGGGGTCGGCACATCCTGAG+AGG - chr3_4:59850122-59850141 None:intergenic 65.0%
! GTGGCCCCGGTGGAGTTGGT+CGG + chr3_4:59849591-59849610 Msa0510710:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 59847333 59850563 59847333 ID=Msa0510710;Name=Msa0510710
chr3_4 mRNA 59847333 59850563 59847333 ID=Msa0510710-mRNA-1;Parent=Msa0510710;Name=Msa0510710-mRNA-1;_AED=0.03;_eAED=0.03;_QI=201|1|1|1|1|1|4|344|403
chr3_4 exon 59847333 59847606 59847333 ID=Msa0510710-mRNA-1:exon:14167;Parent=Msa0510710-mRNA-1
chr3_4 exon 59847721 59847842 59847721 ID=Msa0510710-mRNA-1:exon:14168;Parent=Msa0510710-mRNA-1
chr3_4 exon 59847947 59847990 59847947 ID=Msa0510710-mRNA-1:exon:14169;Parent=Msa0510710-mRNA-1
chr3_4 exon 59849247 59850563 59849247 ID=Msa0510710-mRNA-1:exon:14170;Parent=Msa0510710-mRNA-1
chr3_4 five_prime_UTR 59847333 59847533 59847333 ID=Msa0510710-mRNA-1:five_prime_utr;Parent=Msa0510710-mRNA-1
chr3_4 CDS 59847534 59847606 59847534 ID=Msa0510710-mRNA-1:cds;Parent=Msa0510710-mRNA-1
chr3_4 CDS 59847721 59847842 59847721 ID=Msa0510710-mRNA-1:cds;Parent=Msa0510710-mRNA-1
chr3_4 CDS 59847947 59847990 59847947 ID=Msa0510710-mRNA-1:cds;Parent=Msa0510710-mRNA-1
chr3_4 CDS 59849247 59850219 59849247 ID=Msa0510710-mRNA-1:cds;Parent=Msa0510710-mRNA-1
chr3_4 three_prime_UTR 59850220 59850563 59850220 ID=Msa0510710-mRNA-1:three_prime_utr;Parent=Msa0510710-mRNA-1
Gene Sequence

>Msa0510710

ATGGCGACCCTTTTCCAAGCATTGGGAGCTGCTGTTACCCCTTTGTCTCCATCCAATTCCTTTCAATCCAAAGAGAGGAAAGGTAGCAGCATTTTTGTTGTCAGATCATCTGATGCAAAGGTGAATCAGGTTGTTTTGAAATCAGGAGGAGCAACTCGTAAGGGTGGTGAATTGTTGATTCCTAATGCAGTTGCAACACAGGGAAGCAGTTCCGTGGCTTCTGCGGCCTCAAAACCTGGGCATGAACTTCTCCTTTTTGAAGCCCTCCGTGAAGGTTTGGAAGAAGAAATGGAAAGGGATCCTTGTGTTTGTGTTATGGGCGAAGATGTAGGTCATTATGGAGGATCTTACAAGGTGACTAGAAACCTAGCTGAAAAGTTTGGTGACCTCAGAGTCTTGGACACCCCTATTGCTGAGAACGCCTTCACTGGAATGGGCATTGGAGCTGCCATGACTGGTCTGAGGCCAACCATTGAGGGCATGAACATGGGATTTCTACTTCTGGCATTTAACCAAATCTCTAACAATTGTGGAATGCTGCATTACACATCCGGAGGTCAGTTTAAAATACCAGTTGTCATTCGTGGCCCCGGTGGAGTTGGTCGGCAACTTGGAGCAGAACACTCACAGCGTTTGGAATCGTATTTTCAATCAATCCCTGGTATTCAGATGGTGGCTTGTTCAACACCTTACAACGCCAAGGGCTTGATGAAAGCTGCGATTCGAAGTGACAACCCTGTGATACTTTTTGAGCATGTTTTGCTTTATAACCTCAAGGAAAGAATTCCAGATGAAGAGTATGTATTGTCACTTGAAGAAGCTGAGATGGTTAGGCCTGGTGAGCATGTCACAATATTAACTTATTCGAGGATGAGGTATCATGTCATGCAAGCTGCCAAGACATTAGTGAACAAGGGGTATGACCCTGAAGTAATTGACATCAGGTCTTTGAAACCATTTGATCTTCACACAATTGGGAATTCAATAAAAAAGACGCATCGGGTTCTCATAGTGGAGGAGTGTATGCGGACGGGTGGAATTGGCGCTAGTCTGACAGCTGCCATTACTGAAAATTTCCATGACTATTTGGATGCTCCTATCATATGTTTATCCTCTCAGGATGTGCCGACCCCATATGCCGGAACATTGGAAGAATGGACAGTGGTTCAACCTGCTCAAATTGTGACTGCAGTTGAGCAGCTATGCCAATGA
Protein sequence

>Msa0510710

MATLFQALGAAVTPLSPSNSFQSKERKGSSIFVVRSSDAKVNQVVLKSGGATRKGGELLIPNAVATQGSSSVASAASKPGHELLLFEALREGLEEEMERDPCVCVMGEDVGHYGGSYKVTRNLAEKFGDLRVLDTPIAENAFTGMGIGAAMTGLRPTIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPVVIRGPGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSDNPVILFEHVLLYNLKERIPDEEYVLSLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIICLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ*