Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369630 | XP_024641212.1 | 85.526 | 76 | 11 | 0 | 5 | 80 | 158 | 233 | 5.71e-35 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369630 | A0A396HBD0 | 85.526 | 76 | 11 | 0 | 5 | 80 | 158 | 233 | 2.73e-35 | 131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0369630 | Msa1009480 | 0.827546 | 1.473790e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369630 | MtrunA17_Chr6g0459221 | 85.526 | 76 | 11 | 0 | 5 | 80 | 158 | 233 | 5.26e-39 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369630 | AT4G39630.2 | 63.889 | 72 | 20 | 2 | 10 | 80 | 151 | 217 | 3.77e-22 | 87.8 |
| Msa0369630 | AT4G39630.1 | 63.889 | 72 | 20 | 2 | 10 | 80 | 164 | 230 | 6.13e-22 | 87.4 |
Find 54 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTAATCATACCATTTA+TGG | 0.077957 | 3_1:+66971321 | None:intergenic |
| ACCCACTCAATTCTGATTTA+TGG | 0.091337 | 3_1:-66975583 | Msa0369630:intron |
| TATCTTCCTATGTAGATATT+TGG | 0.179187 | 3_1:-66970060 | Msa0369630:intron |
| CTTGGGAACCCGAAGTGTTT+TGG | 0.200607 | 3_1:+66971411 | None:intergenic |
| CTATGTAGATATTTGGAATA+AGG | 0.271684 | 3_1:-66970053 | Msa0369630:intron |
| GCTTTCACATCATTTCCTTA+TGG | 0.297685 | 3_1:-66969557 | Msa0369630:CDS |
| AATAACATGGAAGCCATAAA+TGG | 0.330124 | 3_1:-66971334 | Msa0369630:intron |
| GTGGAGTTTGGTGAAGAAAT+TGG | 0.359563 | 3_1:+66975672 | None:intergenic |
| AAGAAATTGGTGAAATTTGA+TGG | 0.360739 | 3_1:+66975685 | None:intergenic |
| TTACATAGAACATACCTTAT+GGG | 0.397491 | 3_1:+66975289 | None:intergenic |
| ATAAAGGTCTGCAGACAAAA+AGG | 0.412691 | 3_1:-66969661 | Msa0369630:intron |
| TCTAGCAGAATGATAATTGA+AGG | 0.420059 | 3_1:-66974959 | Msa0369630:intron |
| TCATATTTGCATGTGGAGTT+TGG | 0.421367 | 3_1:+66975660 | None:intergenic |
| GAGATGCTTCTTTCTGTCCA+TGG | 0.428796 | 3_1:-66971382 | Msa0369630:CDS |
| AGAAGCATCTCTCCAGGCTT+GGG | 0.431925 | 3_1:+66971394 | None:intergenic |
| ACACTTCGGGTTCCCAAGCC+TGG | 0.435882 | 3_1:-66971406 | Msa0369630:CDS |
| GTCTATTGTATAGGCTTTGG+AGG | 0.440001 | 3_1:-66971639 | Msa0369630:intron |
| ACTTGTTAGATCATTAGATT+AGG | 0.443257 | 3_1:+66975622 | None:intergenic |
| GATGACACCCAAAACACTTC+GGG | 0.448978 | 3_1:-66971419 | Msa0369630:CDS |
| GAGGACACTAGAGTGGGAAT+TGG | 0.456363 | 3_1:-66974999 | Msa0369630:five_prime_UTR |
| AAGAAGCATCTCTCCAGGCT+TGG | 0.457854 | 3_1:+66971393 | None:intergenic |
| CCAGTGACAGATTTCTGAGT+TGG | 0.464665 | 3_1:-66975141 | Msa0369630:five_prime_UTR |
| ATTGGTGAAATTTGATGGAA+TGG | 0.466997 | 3_1:+66975690 | None:intergenic |
| TGTGGTTGAGAGAAGTAGAT+TGG | 0.471161 | 3_1:-66969615 | Msa0369630:CDS |
| ACCTCAAGCTTACTTCCATA+AGG | 0.479106 | 3_1:+66969542 | None:intergenic |
| TATGATAATTTCATCCCATA+AGG | 0.480276 | 3_1:-66975303 | Msa0369630:intron |
| CAAGAAGGTCTTCTGACTCC+TGG | 0.484397 | 3_1:-66971587 | Msa0369630:CDS |
| TGATGGAATGGAGAGAAGAG+AGG | 0.491759 | 3_1:+66975702 | None:intergenic |
| ATTGTCCTTGTAAACACCTA+GGG | 0.494564 | 3_1:+66971354 | None:intergenic |
| TCTGTCCATGGATCACCCCT+AGG | 0.525999 | 3_1:-66971370 | Msa0369630:CDS |
| GGATGACACCCAAAACACTT+CGG | 0.531639 | 3_1:-66971420 | Msa0369630:CDS |
| CACTAGAGTGGGAATTGGCA+AGG | 0.548048 | 3_1:-66974994 | Msa0369630:five_prime_UTR |
| GATGGAATGGAGAGAAGAGA+GGG | 0.548358 | 3_1:+66975703 | None:intergenic |
| ACAGAAAGAAGCATCTCTCC+AGG | 0.551277 | 3_1:+66971388 | None:intergenic |
| TATTGTCCTTGTAAACACCT+AGG | 0.567249 | 3_1:+66971353 | None:intergenic |
| ACCATAAATCAGAATTGAGT+GGG | 0.567606 | 3_1:+66975582 | None:intergenic |
| ATGGAAGTAAGCTTGAGGTA+TGG | 0.568530 | 3_1:-66969538 | Msa0369630:CDS |
| TACAAAATCATATTTGCATG+TGG | 0.569031 | 3_1:+66975653 | None:intergenic |
| GAGGAGAGAGGACACTAGAG+TGG | 0.575461 | 3_1:-66975006 | Msa0369630:five_prime_UTR |
| TCCTTATGGAAGTAAGCTTG+AGG | 0.585475 | 3_1:-66969543 | Msa0369630:CDS |
| ATCACCCCTAGGTGTTTACA+AGG | 0.589706 | 3_1:-66971359 | Msa0369630:CDS |
| CACCATAAATCAGAATTGAG+TGG | 0.601725 | 3_1:+66975581 | None:intergenic |
| AGGAGAGAGGACACTAGAGT+GGG | 0.604291 | 3_1:-66975005 | Msa0369630:five_prime_UTR |
| CGTGTGTTTGAGAAGAGAGA+GGG | 0.605350 | 3_1:+66975732 | None:intergenic |
| CCAACTCAGAAATCTGTCAC+TGG | 0.608693 | 3_1:+66975141 | None:intergenic |
| CCGTGTGTTTGAGAAGAGAG+AGG | 0.610143 | 3_1:+66975731 | None:intergenic |
| CAGATGTTAGCGATGCAAGA+AGG | 0.615125 | 3_1:-66971602 | Msa0369630:CDS |
| AAACACCTAGGGGTGATCCA+TGG | 0.624497 | 3_1:+66971365 | None:intergenic |
| GCTAACATCTGAGTTTCAGA+TGG | 0.626740 | 3_1:+66971614 | None:intergenic |
| CCTCTCTCTTCTCAAACACA+CGG | 0.632486 | 3_1:-66975731 | Msa0369630:five_prime_UTR |
| ACTAGAGTGGGAATTGGCAA+GGG | 0.655908 | 3_1:-66974993 | Msa0369630:five_prime_UTR |
| CTTTGGAAAATAAAGCAATG+TGG | 0.672010 | 3_1:-66969633 | Msa0369630:CDS |
| TGTTTACAAGGACAATAACA+TGG | 0.678598 | 3_1:-66971347 | Msa0369630:CDS |
| TTGTCCTTGTAAACACCTAG+GGG | 0.684309 | 3_1:+66971355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATTTTCTATTTATAATT+TGG | - | chr3_1:66971642-66971661 | Msa0369630:intron | 10.0% |
| !! | TATAATTTGGAAAAATTATT+TGG | - | chr3_1:66971655-66971674 | Msa0369630:intron | 10.0% |
| !!! | TAAAATATTTCTAAAATGTA+AGG | - | chr3_1:66974453-66974472 | Msa0369630:intron | 10.0% |
| !!! | AAAATATTTCTAAAATGTAA+GGG | - | chr3_1:66974454-66974473 | Msa0369630:intron | 10.0% |
| !!! | TAAAGAAGATTTTAAAATAT+TGG | + | chr3_1:66974920-66974939 | None:intergenic | 10.0% |
| !! | AAATTGAATGTAAAAATTGT+AGG | - | chr3_1:66970067-66970086 | Msa0369630:intron | 15.0% |
| !!! | AAACTTTTCATATCATAAAT+TGG | + | chr3_1:66970474-66970493 | None:intergenic | 15.0% |
| !!! | TTTAAAATTAGTGATTTGTT+GGG | - | chr3_1:66970544-66970563 | Msa0369630:intron | 15.0% |
| !!! | TGATTGATTTTTAATGAATT+TGG | - | chr3_1:66970647-66970666 | Msa0369630:intron | 15.0% |
| !!! | TTAAAAATCAATCAAAGTTT+TGG | + | chr3_1:66970722-66970741 | None:intergenic | 15.0% |
| !!! | TTTATTTGATAACACATTTT+TGG | - | chr3_1:66971445-66971464 | Msa0369630:CDS | 15.0% |
| !!! | TTATTTGATAACACATTTTT+GGG | - | chr3_1:66971446-66971465 | Msa0369630:CDS | 15.0% |
| !!! | TGTTTGCAAATTTTATTTTA+TGG | - | chr3_1:66972037-66972056 | Msa0369630:intron | 15.0% |
| !!! | TGTGAATTTGAATTTTTTTT+GGG | - | chr3_1:66972114-66972133 | Msa0369630:intron | 15.0% |
| !!! | ATATTGAAAATTTTTCTTTG+TGG | - | chr3_1:66972413-66972432 | Msa0369630:intron | 15.0% |
| !!! | TATTGAAAATTTTTCTTTGT+GGG | - | chr3_1:66972414-66972433 | Msa0369630:intron | 15.0% |
| !! | ATTATAATCTAAAAACTGTA+TGG | + | chr3_1:66972991-66973010 | None:intergenic | 15.0% |
| !!! | CAGTTTTTAGATTATAATTT+AGG | - | chr3_1:66972993-66973012 | Msa0369630:intron | 15.0% |
| !!! | TTTTTAGATTATAATTTAGG+TGG | - | chr3_1:66972996-66973015 | Msa0369630:intron | 15.0% |
| !! | AACAAAATCAAACAAATAAA+TGG | + | chr3_1:66973422-66973441 | None:intergenic | 15.0% |
| !! | ATTAGAACAATATAATAAGT+AGG | - | chr3_1:66973580-66973599 | Msa0369630:intron | 15.0% |
| !! | TTAATTAATCATACCATTTA+TGG | + | chr3_1:66974005-66974024 | None:intergenic | 15.0% |
| !! | TATGATTAATTAAAATGCTA+AGG | - | chr3_1:66974012-66974031 | Msa0369630:intron | 15.0% |
| !! | CAAAATCAATTATATTACAT+AGG | + | chr3_1:66974158-66974177 | None:intergenic | 15.0% |
| !!! | CTATGTAATATAATTGATTT+TGG | - | chr3_1:66974156-66974175 | Msa0369630:intron | 15.0% |
| !!! | AATATATTTTTTACAGATTG+AGG | - | chr3_1:66974278-66974297 | Msa0369630:intron | 15.0% |
| !! | AAGTTCTCAAAATTATATTA+AGG | - | chr3_1:66974357-66974376 | Msa0369630:intron | 15.0% |
| !!! | TTATTAGTTATTGCTATTTT+TGG | - | chr3_1:66975156-66975175 | Msa0369630:five_prime_UTR | 15.0% |
| !!! | ATTCTGATTTTTCAATTTTT+TGG | - | chr3_1:66975215-66975234 | Msa0369630:intron | 15.0% |
| !!! | TTCTGATTTTTCAATTTTTT+GGG | - | chr3_1:66975216-66975235 | Msa0369630:intron | 15.0% |
| !! | AAAGAAATATATGTAAACAA+TGG | + | chr3_1:66975449-66975468 | None:intergenic | 15.0% |
| !!! | TTTATTTTTAAGCTTCATAA+AGG | - | chr3_1:66975646-66975665 | Msa0369630:five_prime_UTR | 15.0% |
| !! | ATTTAATTGATAGATTGTGT+AGG | - | chr3_1:66969838-66969857 | Msa0369630:intron | 20.0% |
| !!! | CAGCTATAAATAATTTTGTA+TGG | - | chr3_1:66970431-66970450 | Msa0369630:intron | 20.0% |
| !!! | TATGAAAAGTTTTTTCTTTG+TGG | - | chr3_1:66970482-66970501 | Msa0369630:intron | 20.0% |
| !!! | ATGAAAAGTTTTTTCTTTGT+GGG | - | chr3_1:66970483-66970502 | Msa0369630:intron | 20.0% |
| !!! | GTTTAAAATTAGTGATTTGT+TGG | - | chr3_1:66970543-66970562 | Msa0369630:intron | 20.0% |
| !!! | GTTGATGAATCTAATTTTTT+TGG | - | chr3_1:66970669-66970688 | Msa0369630:intron | 20.0% |
| !!! | TGATTGATTTTTAATGACAT+TGG | - | chr3_1:66970728-66970747 | Msa0369630:intron | 20.0% |
| !! | ATATCATTCATACAGTTATA+CGG | - | chr3_1:66970795-66970814 | Msa0369630:intron | 20.0% |
| !! | AGTACTTAGATCATAATTAA+TGG | + | chr3_1:66970900-66970919 | None:intergenic | 20.0% |
| !!! | TTTGAAAAAACGACTATTTT+TGG | - | chr3_1:66971238-66971257 | Msa0369630:intron | 20.0% |
| !!! | ATCTGAAAATAAGTTTGTTT+TGG | + | chr3_1:66971530-66971549 | None:intergenic | 20.0% |
| !!! | GTGTGAATTTGAATTTTTTT+TGG | - | chr3_1:66972113-66972132 | Msa0369630:intron | 20.0% |
| !! | TACCTTCAATAAGAATTATA+AGG | - | chr3_1:66972327-66972346 | Msa0369630:intron | 20.0% |
| !!! | TTGCTTTTTATAATCTATTC+AGG | - | chr3_1:66972370-66972389 | Msa0369630:intron | 20.0% |
| !!! | TTTTCAATATCATAAATTCG+TGG | + | chr3_1:66972403-66972422 | None:intergenic | 20.0% |
| !!! | TGATATTTTAAACTGATAGA+TGG | - | chr3_1:66972726-66972745 | Msa0369630:intron | 20.0% |
| !!! | GCATCAAAATTTAACTTAAT+TGG | + | chr3_1:66972966-66972985 | None:intergenic | 20.0% |
| !!! | TTTGTATTTTCAACTTTTAG+TGG | - | chr3_1:66973217-66973236 | Msa0369630:intron | 20.0% |
| !!! | TTTAAAACTTAGTAAAACCA+AGG | + | chr3_1:66973255-66973274 | None:intergenic | 20.0% |
| !!! | TTGGTTTTACTAAGTTTTAA+AGG | - | chr3_1:66973254-66973273 | Msa0369630:intron | 20.0% |
| !!! | TGGTTTTACTAAGTTTTAAA+GGG | - | chr3_1:66973255-66973274 | Msa0369630:intron | 20.0% |
| !! | TTATCAAACTATATAGTTGT+TGG | - | chr3_1:66973636-66973655 | Msa0369630:intron | 20.0% |
| !!! | AATTTTGAGAACTTGTTTTA+AGG | + | chr3_1:66974351-66974370 | None:intergenic | 20.0% |
| !!! | ATGGTTGGTTAAATTTTATT+TGG | - | chr3_1:66974551-66974570 | Msa0369630:intron | 20.0% |
| !!! | ATTTGAGGCAAAAATAAATT+GGG | + | chr3_1:66974784-66974803 | None:intergenic | 20.0% |
| !!! | TCTAGCATGTAAATTAATTT+TGG | - | chr3_1:66974863-66974882 | Msa0369630:intron | 20.0% |
| !! | AAGAAAACAAAAAAAAGAGT+TGG | + | chr3_1:66975011-66975030 | None:intergenic | 20.0% |
| !! | AACATAAATAATTCTAGTCT+AGG | + | chr3_1:66975127-66975146 | None:intergenic | 20.0% |
| !!! | CAATACTATTTTGTAATACT+TGG | - | chr3_1:66975343-66975362 | Msa0369630:intron | 20.0% |
| !!! | CTAATACTAAAGTTGATTTT+TGG | - | chr3_1:66975482-66975501 | Msa0369630:intron | 20.0% |
| !!! | ATACATAATGTTGTTGTTAT+TGG | - | chr3_1:66975515-66975534 | Msa0369630:intron | 20.0% |
| ! | AAGAAATTGGTGAAATTTGA+TGG | + | chr3_1:66969641-66969660 | None:intergenic | 25.0% |
| ! | TACAAAATCATATTTGCATG+TGG | + | chr3_1:66969673-66969692 | None:intergenic | 25.0% |
| !! | ACTTGTTAGATCATTAGATT+AGG | + | chr3_1:66969704-66969723 | None:intergenic | 25.0% |
| !!! | ACTGATTTTTTTTTTTCTCC+AGG | - | chr3_1:66969978-66969997 | Msa0369630:intron | 25.0% |
| ! | TATGATAATTTCATCCCATA+AGG | - | chr3_1:66970020-66970039 | Msa0369630:intron | 25.0% |
| ! | TTACATAGAACATACCTTAT+GGG | + | chr3_1:66970037-66970056 | None:intergenic | 25.0% |
| ! | TTTACATAGAACATACCTTA+TGG | + | chr3_1:66970038-66970057 | None:intergenic | 25.0% |
| ! | ATGTTACTGTATAGATAAAC+CGG | + | chr3_1:66970276-66970295 | None:intergenic | 25.0% |
| !!! | TGGTTTTAGCATAAATTTTC+AGG | - | chr3_1:66970295-66970314 | Msa0369630:intron | 25.0% |
| !!! | TTTTAGCATAAATTTTCAGG+AGG | - | chr3_1:66970298-66970317 | Msa0369630:intron | 25.0% |
| !!! | TTTTTAATGACATTGGTTGA+TGG | - | chr3_1:66970735-66970754 | Msa0369630:intron | 25.0% |
| ! | TTGTATAATTGTTCTGCAAA+AGG | + | chr3_1:66970846-66970865 | None:intergenic | 25.0% |
| ! | TTTGCAGAACAATTATACAA+TGG | - | chr3_1:66970846-66970865 | Msa0369630:intron | 25.0% |
| ! | AATGGATGCATACAAATTAA+TGG | + | chr3_1:66970882-66970901 | None:intergenic | 25.0% |
| ! | TATTGTTTGTGCTATGAATT+AGG | - | chr3_1:66970929-66970948 | Msa0369630:intron | 25.0% |
| !! | ATTTTGCCAAAAAGATTTCT+TGG | - | chr3_1:66970985-66971004 | Msa0369630:intron | 25.0% |
| ! | ATACTATAGTATGAGTAGAT+TGG | + | chr3_1:66971036-66971055 | None:intergenic | 25.0% |
| ! | GATCATTTAATTGTACAATC+TGG | + | chr3_1:66971478-66971497 | None:intergenic | 25.0% |
| !! | GAAAACTTTTACACAGAAAA+TGG | + | chr3_1:66971588-66971607 | None:intergenic | 25.0% |
| ! | AAAATTATTTGGTCTATTCG+TGG | - | chr3_1:66971666-66971685 | Msa0369630:intron | 25.0% |
| ! | CTTCAAAAAATCTTGACATA+TGG | + | chr3_1:66971813-66971832 | None:intergenic | 25.0% |
| !! | AACTATCTAAAGTTCTATCA+AGG | - | chr3_1:66971941-66971960 | Msa0369630:intron | 25.0% |
| !!! | GCAAATTTTATTTTATGGTG+AGG | - | chr3_1:66972042-66972061 | Msa0369630:intron | 25.0% |
| ! | TTGATTATCATTCAATTACC+TGG | + | chr3_1:66972231-66972250 | None:intergenic | 25.0% |
| ! | GTAATTGAATGATAATCAAC+TGG | - | chr3_1:66972232-66972251 | Msa0369630:intron | 25.0% |
| ! | CACCTTATAATTCTTATTGA+AGG | + | chr3_1:66972332-66972351 | None:intergenic | 25.0% |
| !!! | ATGAGATAAAGATTTTAGAG+AGG | - | chr3_1:66972754-66972773 | Msa0369630:intron | 25.0% |
| ! | TATATAGAACTAGCAAGATT+AGG | - | chr3_1:66973062-66973081 | Msa0369630:intron | 25.0% |
| ! | ACATTATAGGAGAATTTAAG+AGG | - | chr3_1:66973110-66973129 | Msa0369630:intron | 25.0% |
| ! | ATATTTATGATAGCCATGTA+TGG | - | chr3_1:66973169-66973188 | Msa0369630:intron | 25.0% |
| !!! | GGTTTTACTAAGTTTTAAAG+GGG | - | chr3_1:66973256-66973275 | Msa0369630:intron | 25.0% |
| ! | TACTTAGAGATAAAGATGAA+TGG | - | chr3_1:66973485-66973504 | Msa0369630:intron | 25.0% |
| ! | AGAACAATATAATAAGTAGG+TGG | - | chr3_1:66973583-66973602 | Msa0369630:intron | 25.0% |
| ! | TACAAACATGTCTATTGTAT+AGG | - | chr3_1:66973675-66973694 | Msa0369630:intron | 25.0% |
| ! | AGTTCATTTAAATGAAATGC+AGG | + | chr3_1:66973779-66973798 | None:intergenic | 25.0% |
| !!! | GATATGTTTTTGAGTGTAAA+AGG | - | chr3_1:66973801-66973820 | Msa0369630:intron | 25.0% |
| ! | TTCATTCTTTACCATGTTAA+AGG | - | chr3_1:66974051-66974070 | Msa0369630:intron | 25.0% |
| ! | TATTTCTTGTTCCTTTAACA+TGG | + | chr3_1:66974065-66974084 | None:intergenic | 25.0% |
| ! | ATATCAAAATCACAGCATTA+TGG | + | chr3_1:66974098-66974117 | None:intergenic | 25.0% |
| ! | TTTCATTTCCTTAAATTGCA+TGG | - | chr3_1:66974393-66974412 | Msa0369630:intron | 25.0% |
| ! | ATAAGACCTATAATGTTGTA+AGG | - | chr3_1:66974496-66974515 | Msa0369630:intron | 25.0% |
| !!! | AAATTTTATTTGGTCCTTAC+AGG | - | chr3_1:66974561-66974580 | Msa0369630:intron | 25.0% |
| ! | TTCATAATCATATTCCTGTA+AGG | + | chr3_1:66974578-66974597 | None:intergenic | 25.0% |
| ! | ATATGATTATGAAGCTACAA+TGG | - | chr3_1:66974585-66974604 | Msa0369630:intron | 25.0% |
| !!! | TAACACATGTTTTGAATTCT+TGG | - | chr3_1:66974653-66974672 | Msa0369630:intron | 25.0% |
| !! | TTTGAGGCAAAAATAAATTG+GGG | + | chr3_1:66974783-66974802 | None:intergenic | 25.0% |
| !! | CATTTGAGGCAAAAATAAAT+TGG | + | chr3_1:66974785-66974804 | None:intergenic | 25.0% |
| ! | CATGCTAGAGAATAAAAAAT+TGG | + | chr3_1:66974852-66974871 | None:intergenic | 25.0% |
| ! | TATCTTCCTATGTAGATATT+TGG | - | chr3_1:66975263-66975282 | Msa0369630:intron | 25.0% |
| ! | CTTATTCCAAATATCTACAT+AGG | + | chr3_1:66975272-66975291 | None:intergenic | 25.0% |
| !! | CTATGTAGATATTTGGAATA+AGG | - | chr3_1:66975270-66975289 | Msa0369630:intron | 25.0% |
| !! | TAGATATTTGGAATAAGGTA+TGG | - | chr3_1:66975275-66975294 | Msa0369630:intron | 25.0% |
| !! | AGATATTTGGAATAAGGTAT+GGG | - | chr3_1:66975276-66975295 | Msa0369630:intron | 25.0% |
| !!! | TGTTTTTTTAGAGAGAGAAG+GGG | + | chr3_1:66969554-66969573 | None:intergenic | 30.0% |
| !!! | CTGTTTTTTTAGAGAGAGAA+GGG | + | chr3_1:66969555-66969574 | None:intergenic | 30.0% |
| !!! | TCTGTTTTTTTAGAGAGAGA+AGG | + | chr3_1:66969556-66969575 | None:intergenic | 30.0% |
| ATTGGTGAAATTTGATGGAA+TGG | + | chr3_1:66969636-66969655 | None:intergenic | 30.0% | |
| ACCATAAATCAGAATTGAGT+GGG | + | chr3_1:66969744-66969763 | None:intergenic | 30.0% | |
| !!! | TATGGTGAGTTTTGTTTGAT+TGG | - | chr3_1:66969758-66969777 | Msa0369630:intron | 30.0% |
| !!! | ATGGTGAGTTTTGTTTGATT+GGG | - | chr3_1:66969759-66969778 | Msa0369630:intron | 30.0% |
| !! | ATTAAAATCTAGAAGTGTCC+TGG | + | chr3_1:66969999-66970018 | None:intergenic | 30.0% |
| ! | TGTATGACTTTTGTATCTAC+CGG | - | chr3_1:66970254-66970273 | Msa0369630:intron | 30.0% |
| GGTTTATCTATACAGTAACA+TGG | - | chr3_1:66970275-66970294 | Msa0369630:intron | 30.0% | |
| TCTAGCAGAATGATAATTGA+AGG | - | chr3_1:66970364-66970383 | Msa0369630:intron | 30.0% | |
| !! | GATAAGTTTTATGTGTTTGC+TGG | - | chr3_1:66970516-66970535 | Msa0369630:intron | 30.0% |
| CTTTGTGTAGAAATGTTTGT+TGG | - | chr3_1:66970586-66970605 | Msa0369630:intron | 30.0% | |
| !! | TCACTGTCATCTAAAGTTTT+AGG | + | chr3_1:66970763-66970782 | None:intergenic | 30.0% |
| !! | TACAAATTAATGGACTTCCA+GGG | + | chr3_1:66970872-66970891 | None:intergenic | 30.0% |
| !! | ATACAAATTAATGGACTTCC+AGG | + | chr3_1:66970873-66970892 | None:intergenic | 30.0% |
| ! | CTTTCACCAAGAAATCTTTT+TGG | + | chr3_1:66970994-66971013 | None:intergenic | 30.0% |
| ACGTATAGATACATTATGCA+AGG | - | chr3_1:66971284-66971303 | Msa0369630:intron | 30.0% | |
| AAGAGTTCAAGTCTACTTAT+AGG | - | chr3_1:66971346-66971365 | Msa0369630:CDS | 30.0% | |
| ATATACACGTTGCAAAAAGA+TGG | + | chr3_1:66971376-66971395 | None:intergenic | 30.0% | |
| TAAATGATCTCAAAGTCAGT+AGG | - | chr3_1:66971417-66971436 | Msa0369630:CDS | 30.0% | |
| TCAGATCATTTATAACCCAA+AGG | - | chr3_1:66971544-66971563 | Msa0369630:intron | 30.0% | |
| CAGATCATTTATAACCCAAA+GGG | - | chr3_1:66971545-66971564 | Msa0369630:intron | 30.0% | |
| TATTGTGAAATCAACCCTTT+GGG | + | chr3_1:66971562-66971581 | None:intergenic | 30.0% | |
| ! | GAGAATCTGCATTGATATTA+TGG | + | chr3_1:66971616-66971635 | None:intergenic | 30.0% |
| AAGATTCTTGAGAACATTGT+AGG | + | chr3_1:66971716-66971735 | None:intergenic | 30.0% | |
| AATGCATCTAATAAGTGCTA+AGG | + | chr3_1:66971991-66972010 | None:intergenic | 30.0% | |
| TAAGATACTGATGATACAGA+TGG | + | chr3_1:66972175-66972194 | None:intergenic | 30.0% | |
| ! | TTACCAAGCTTAATTTTTCC+AGG | - | chr3_1:66972210-66972229 | Msa0369630:intron | 30.0% |
| TTACCTGGAAAAATTAAGCT+TGG | + | chr3_1:66972216-66972235 | None:intergenic | 30.0% | |
| ATTGAATGATAATCAACTGG+TGG | - | chr3_1:66972235-66972254 | Msa0369630:intron | 30.0% | |
| TTGAATGATAATCAACTGGT+GGG | - | chr3_1:66972236-66972255 | Msa0369630:intron | 30.0% | |
| AACAGATGACTATTTGTATG+AGG | - | chr3_1:66972440-66972459 | Msa0369630:intron | 30.0% | |
| AAACCATATACAGATCACAT+TGG | + | chr3_1:66972509-66972528 | None:intergenic | 30.0% | |
| !! | AAAGATTTTAGAGAGGAAAC+AGG | - | chr3_1:66972761-66972780 | Msa0369630:intron | 30.0% |
| CCTATAATGTAGACATTGTA+TGG | + | chr3_1:66973100-66973119 | None:intergenic | 30.0% | |
| CCATACAATGTCTACATTAT+AGG | - | chr3_1:66973097-66973116 | Msa0369630:intron | 30.0% | |
| ! | GTTTGTAGAAAATAGCTTTG+TGG | + | chr3_1:66973662-66973681 | None:intergenic | 30.0% |
| CATTTAAATGAAATGCAGGA+AGG | + | chr3_1:66973775-66973794 | None:intergenic | 30.0% | |
| TGTTTACAAGGACAATAACA+TGG | - | chr3_1:66973976-66973995 | Msa0369630:intron | 30.0% | |
| AATAACATGGAAGCCATAAA+TGG | - | chr3_1:66973989-66974008 | Msa0369630:intron | 30.0% | |
| GATTCAAAGACTGAAATAGA+AGG | + | chr3_1:66974131-66974150 | None:intergenic | 30.0% | |
| ATTCTGTGATTGTTCTGTTT+CGG | - | chr3_1:66974301-66974320 | Msa0369630:intron | 30.0% | |
| AGGAAATGAAAACTGAGTTA+GGG | + | chr3_1:66974384-66974403 | None:intergenic | 30.0% | |
| AAGGAAATGAAAACTGAGTT+AGG | + | chr3_1:66974385-66974404 | None:intergenic | 30.0% | |
| CACTAACCTTACAACATTAT+AGG | + | chr3_1:66974505-66974524 | None:intergenic | 30.0% | |
| AAGCTCTCAAAAGATAACTA+CGG | - | chr3_1:66974613-66974632 | Msa0369630:intron | 30.0% | |
| ! | ATTATTTTCCAGTGAAGAAC+AGG | + | chr3_1:66974683-66974702 | None:intergenic | 30.0% |
| AAATGTGATGAGGCAAAAAT+TGG | + | chr3_1:66974754-66974773 | None:intergenic | 30.0% | |
| TTGAGGCAAAAATAAATTGG+GGG | + | chr3_1:66974782-66974801 | None:intergenic | 30.0% | |
| AAAAGAATACAGCAGATGAA+GGG | + | chr3_1:66974817-66974836 | None:intergenic | 30.0% | |
| GGGACAAATAGAAATAGAAA+GGG | + | chr3_1:66974962-66974981 | None:intergenic | 30.0% | |
| AGGGACAAATAGAAATAGAA+AGG | + | chr3_1:66974963-66974982 | None:intergenic | 30.0% | |
| TAAGAACAAAAGTGAGTGAA+GGG | + | chr3_1:66974982-66975001 | None:intergenic | 30.0% | |
| TCACTAAGAAAATTGTAAGC+AGG | - | chr3_1:66975069-66975088 | Msa0369630:intron | 30.0% | |
| CACTAAGAAAATTGTAAGCA+GGG | - | chr3_1:66975070-66975089 | Msa0369630:intron | 30.0% | |
| AATCTATATATCTCCCTAGT+CGG | + | chr3_1:66975097-66975116 | None:intergenic | 30.0% | |
| !! | TTGGTGTTGAATATTGACTT+TGG | - | chr3_1:66975175-66975194 | Msa0369630:five_prime_UTR | 30.0% |
| GTAAACAATGGTTATAGCAA+TGG | + | chr3_1:66975437-66975456 | None:intergenic | 30.0% | |
| !!! | CACATTGCTTTATTTTCCAA+AGG | + | chr3_1:66975692-66975711 | None:intergenic | 30.0% |
| ! | CTTTGGAAAATAAAGCAATG+TGG | - | chr3_1:66975690-66975709 | Msa0369630:five_prime_UTR | 30.0% |
| TCATATTTGCATGTGGAGTT+TGG | + | chr3_1:66969666-66969685 | None:intergenic | 35.0% | |
| ACCCACTCAATTCTGATTTA+TGG | - | chr3_1:66969740-66969759 | Msa0369630:intron | 35.0% | |
| CACCATAAATCAGAATTGAG+TGG | + | chr3_1:66969745-66969764 | None:intergenic | 35.0% | |
| TAGATTGTGTAGGTATGAAG+AGG | - | chr3_1:66969848-66969867 | Msa0369630:intron | 35.0% | |
| AGATTGTGTAGGTATGAAGA+GGG | - | chr3_1:66969849-66969868 | Msa0369630:intron | 35.0% | |
| TGCACAGTGAAAAAGAAAAG+AGG | - | chr3_1:66970153-66970172 | Msa0369630:intron | 35.0% | |
| ! | TGTTATGACCACTTGCATTT+TGG | - | chr3_1:66970222-66970241 | Msa0369630:intron | 35.0% |
| AAGTTAGTCCAAAATGCAAG+TGG | + | chr3_1:66970233-66970252 | None:intergenic | 35.0% | |
| !! | ATAAATTTTCAGGAGGAGAG+AGG | - | chr3_1:66970305-66970324 | Msa0369630:intron | 35.0% |
| TGTTTGTGCTATGAATTAGG+TGG | - | chr3_1:66970932-66970951 | Msa0369630:intron | 35.0% | |
| !! | AAATGAATGTTCTGAGACAC+TGG | + | chr3_1:66971060-66971079 | None:intergenic | 35.0% |
| ! | ATTTGAAACAGTGTTGTGAC+AGG | + | chr3_1:66971083-66971102 | None:intergenic | 35.0% |
| AAACCAGTGTTATAGCATAG+CGG | - | chr3_1:66971213-66971232 | Msa0369630:intron | 35.0% | |
| CTATTGTGAAATCAACCCTT+TGG | + | chr3_1:66971563-66971582 | None:intergenic | 35.0% | |
| TGTTCTCAAGAATCTTAGTG+AGG | - | chr3_1:66971720-66971739 | Msa0369630:intron | 35.0% | |
| !!! | AGAGTGGTTTTATGATGCAT+TGG | - | chr3_1:66971749-66971768 | Msa0369630:intron | 35.0% |
| ! | AGAGTCTACTTTGAAGAGTA+AGG | - | chr3_1:66971836-66971855 | Msa0369630:intron | 35.0% |
| GAAGAGTAAGGTTAAGAACA+TGG | - | chr3_1:66971848-66971867 | Msa0369630:intron | 35.0% | |
| GTGAAATTCCGAATGAGTTT+GGG | - | chr3_1:66972258-66972277 | Msa0369630:intron | 35.0% | |
| CATTGGCAAATGTCACAAAA+AGG | + | chr3_1:66972492-66972511 | None:intergenic | 35.0% | |
| TTGCCAATGTGATCTGTATA+TGG | - | chr3_1:66972503-66972522 | Msa0369630:intron | 35.0% | |
| CTGTATATGGTTTCCAATTG+CGG | - | chr3_1:66972516-66972535 | Msa0369630:intron | 35.0% | |
| AGTGGTCAAAATCAATACCT+TGG | - | chr3_1:66973235-66973254 | Msa0369630:intron | 35.0% | |
| !!! | TAAGTTTTAAAGGGGCCAAA+TGG | - | chr3_1:66973264-66973283 | Msa0369630:intron | 35.0% |
| ACAAGTAAAACAAGTGATGC+AGG | - | chr3_1:66973300-66973319 | Msa0369630:intron | 35.0% | |
| CAAGTAAAACAAGTGATGCA+GGG | - | chr3_1:66973301-66973320 | Msa0369630:intron | 35.0% | |
| AAGTAAAACAAGTGATGCAG+GGG | - | chr3_1:66973302-66973321 | Msa0369630:intron | 35.0% | |
| ! | TGTCACTCAATCTGTTTTCA+TGG | - | chr3_1:66973335-66973354 | Msa0369630:intron | 35.0% |
| !!! | ATGGTTTTATCCACTGTTGT+TGG | - | chr3_1:66973354-66973373 | Msa0369630:intron | 35.0% |
| ! | TTTGTTACTCATTGCTGACT+AGG | - | chr3_1:66973436-66973455 | Msa0369630:intron | 35.0% |
| ! | TTGTTACTCATTGCTGACTA+GGG | - | chr3_1:66973437-66973456 | Msa0369630:intron | 35.0% |
| GTAATGTCTTGAGTCTTCAT+TGG | - | chr3_1:66973459-66973478 | Msa0369630:intron | 35.0% | |
| CATGTCTATTGTATAGGCTT+TGG | - | chr3_1:66973681-66973700 | Msa0369630:intron | 35.0% | |
| GTGTAAAAGGTTGTCACAAA+TGG | - | chr3_1:66973814-66973833 | Msa0369630:intron | 35.0% | |
| GTTGTTAACTCTTCAGTTGA+AGG | + | chr3_1:66973840-66973859 | None:intergenic | 35.0% | |
| ATTGTCCTTGTAAACACCTA+GGG | + | chr3_1:66973972-66973991 | None:intergenic | 35.0% | |
| TATTGTCCTTGTAAACACCT+AGG | + | chr3_1:66973973-66973992 | None:intergenic | 35.0% | |
| CACATCACATGATATTGCAA+CGG | + | chr3_1:66974246-66974265 | None:intergenic | 35.0% | |
| TTCTGTGATTGTTCTGTTTC+GGG | - | chr3_1:66974302-66974321 | Msa0369630:intron | 35.0% | |
| TTGAGAGTCCATGCAATTTA+AGG | + | chr3_1:66974404-66974423 | None:intergenic | 35.0% | |
| ! | TAGTGTTGAAGACATGATAG+CGG | - | chr3_1:66974520-66974539 | Msa0369630:intron | 35.0% |
| TCTCAAAAGATAACTACGGT+TGG | - | chr3_1:66974617-66974636 | Msa0369630:intron | 35.0% | |
| CTCTGCAAACTTTAGTATAG+AGG | - | chr3_1:66974703-66974722 | Msa0369630:intron | 35.0% | |
| AAAGAATACAGCAGATGAAG+GGG | + | chr3_1:66974816-66974835 | None:intergenic | 35.0% | |
| GAAAAGAATACAGCAGATGA+AGG | + | chr3_1:66974818-66974837 | None:intergenic | 35.0% | |
| ! | CTGCTGTATTCTTTTCTTCT+AGG | - | chr3_1:66974822-66974841 | Msa0369630:intron | 35.0% |
| TTGGAACAAGATATCTCCAA+TGG | - | chr3_1:66974882-66974901 | Msa0369630:intron | 35.0% | |
| GTAAGAACAAAAGTGAGTGA+AGG | + | chr3_1:66974983-66975002 | None:intergenic | 35.0% | |
| ! | ATTAGAGCTCTGCTTTGAAT+TGG | - | chr3_1:66975558-66975577 | Msa0369630:intron | 35.0% |
| ATAAAGGTCTGCAGACAAAA+AGG | - | chr3_1:66975662-66975681 | Msa0369630:five_prime_UTR | 35.0% | |
| GCTTTCACATCATTTCCTTA+TGG | - | chr3_1:66975766-66975785 | Msa0369630:five_prime_UTR | 35.0% | |
| ! | GTGGAGTTTGGTGAAGAAAT+TGG | + | chr3_1:66969654-66969673 | None:intergenic | 40.0% |
| ! | CAGATTTCTGAGTTGGAAGT+AGG | - | chr3_1:66970189-66970208 | Msa0369630:intron | 40.0% |
| !! | TTTTTCTTTGTGGGCTGAAC+AGG | - | chr3_1:66970492-66970511 | Msa0369630:intron | 40.0% |
| !! | GTTTTATGTGTTTGCTGGTG+AGG | - | chr3_1:66970521-66970540 | Msa0369630:intron | 40.0% |
| GAACAATTATACAATGGCCC+TGG | - | chr3_1:66970852-66970871 | Msa0369630:intron | 40.0% | |
| GTGGTAAGCTAATCAACATG+AGG | - | chr3_1:66970951-66970970 | Msa0369630:intron | 40.0% | |
| AACCAGTGTTATAGCATAGC+GGG | - | chr3_1:66971214-66971233 | Msa0369630:intron | 40.0% | |
| CTCAAAGTCAGTAGGTTAGA+AGG | - | chr3_1:66971497-66971516 | Msa0369630:intron | 40.0% | |
| AAGTCAGTAGGTTAGAAGGA+AGG | - | chr3_1:66971501-66971520 | Msa0369630:intron | 40.0% | |
| ! | CTTAGTGAGGTATTACAGAG+TGG | - | chr3_1:66971733-66971752 | Msa0369630:intron | 40.0% |
| AGGTTAAGAACATGGTCAAG+AGG | - | chr3_1:66971856-66971875 | Msa0369630:intron | 40.0% | |
| CATGTAGATCACATGGGTTT+GGG | + | chr3_1:66971968-66971987 | None:intergenic | 40.0% | |
| CTAAGGCATGTAGATCACAT+GGG | + | chr3_1:66971974-66971993 | None:intergenic | 40.0% | |
| GGTGAAATTCCGAATGAGTT+TGG | - | chr3_1:66972257-66972276 | Msa0369630:intron | 40.0% | |
| TCAAGCTTCCCAAACTCATT+CGG | + | chr3_1:66972269-66972288 | None:intergenic | 40.0% | |
| !! | AAAATTAAGTTGACGCCGCA+AGG | - | chr3_1:66972841-66972860 | Msa0369630:intron | 40.0% |
| TTGCGATATTGCAGCTATTG+CGG | + | chr3_1:66972880-66972899 | None:intergenic | 40.0% | |
| CAATAGCTGCAATATCGCAA+AGG | - | chr3_1:66972880-66972899 | Msa0369630:intron | 40.0% | |
| !!! | ATGGTTTTAAAATGCAGCCG+CGG | + | chr3_1:66972918-66972937 | None:intergenic | 40.0% |
| AAACCATGGTTCTTTGTGCT+TGG | - | chr3_1:66972931-66972950 | Msa0369630:intron | 40.0% | |
| GCACTGCAAATTTCCATACA+TGG | + | chr3_1:66973185-66973204 | None:intergenic | 40.0% | |
| ATGGAAATTTGCAGTGCTGT+TGG | - | chr3_1:66973188-66973207 | Msa0369630:intron | 40.0% | |
| !! | TTTTAAAGGGGCCAAATGGT+TGG | - | chr3_1:66973268-66973287 | Msa0369630:intron | 40.0% |
| GTAAAACCAGTCCAACCATT+TGG | + | chr3_1:66973282-66973301 | None:intergenic | 40.0% | |
| ! | GTCTATTGTATAGGCTTTGG+AGG | - | chr3_1:66973684-66973703 | Msa0369630:intron | 40.0% |
| GCTAACATCTGAGTTTCAGA+TGG | + | chr3_1:66973712-66973731 | None:intergenic | 40.0% | |
| ! | CAACTGAATATGCGTTTTGC+AGG | - | chr3_1:66973856-66973875 | Msa0369630:intron | 40.0% |
| ! | AGTAGTCAGAGGTTTTCTGT+TGG | - | chr3_1:66973881-66973900 | Msa0369630:intron | 40.0% |
| ! | GTAGTCAGAGGTTTTCTGTT+GGG | - | chr3_1:66973882-66973901 | Msa0369630:intron | 40.0% |
| TTGTCCTTGTAAACACCTAG+GGG | + | chr3_1:66973971-66973990 | None:intergenic | 40.0% | |
| TCACATGATATTGCAACGGA+AGG | + | chr3_1:66974242-66974261 | None:intergenic | 40.0% | |
| CGTTGCAATATCATGTGATG+TGG | - | chr3_1:66974244-66974263 | Msa0369630:intron | 40.0% | |
| AAATTGCATGGACTCTCAAC+AGG | - | chr3_1:66974405-66974424 | Msa0369630:intron | 40.0% | |
| CTCAACAGGTGGAATGATTT+AGG | - | chr3_1:66974419-66974438 | Msa0369630:intron | 40.0% | |
| !! | AAGACATGATAGCGGAACAT+TGG | - | chr3_1:66974528-66974547 | Msa0369630:intron | 40.0% |
| AGGCAAAAATTGGAGTTCCA+AGG | + | chr3_1:66974744-66974763 | None:intergenic | 40.0% | |
| AAGAATACAGCAGATGAAGG+GGG | + | chr3_1:66974815-66974834 | None:intergenic | 40.0% | |
| ! | TTGGAAAGCACAATAGCCAT+TGG | + | chr3_1:66974901-66974920 | None:intergenic | 40.0% |
| GACGCATCTTAACTGAAATC+TGG | - | chr3_1:66975238-66975257 | Msa0369630:intron | 40.0% | |
| CAGACAAAAAGGTCTACCTT+TGG | - | chr3_1:66975673-66975692 | Msa0369630:five_prime_UTR | 40.0% | |
| TGTGGTTGAGAGAAGTAGAT+TGG | - | chr3_1:66975708-66975727 | Msa0369630:five_prime_UTR | 40.0% | |
| TCCTTATGGAAGTAAGCTTG+AGG | - | chr3_1:66975780-66975799 | Msa0369630:five_prime_UTR | 40.0% | |
| ACCTCAAGCTTACTTCCATA+AGG | + | chr3_1:66975784-66975803 | None:intergenic | 40.0% | |
| ATGGAAGTAAGCTTGAGGTA+TGG | - | chr3_1:66975785-66975804 | Msa0369630:five_prime_UTR | 40.0% | |
| CGTGTGTTTGAGAAGAGAGA+GGG | + | chr3_1:66969594-66969613 | None:intergenic | 45.0% | |
| CCTCTCTCTTCTCAAACACA+CGG | - | chr3_1:66969592-66969611 | Msa0369630:CDS | 45.0% | |
| GATGGAATGGAGAGAAGAGA+GGG | + | chr3_1:66969623-66969642 | None:intergenic | 45.0% | |
| TGATGGAATGGAGAGAAGAG+AGG | + | chr3_1:66969624-66969643 | None:intergenic | 45.0% | |
| CCAACTCAGAAATCTGTCAC+TGG | + | chr3_1:66970185-66970204 | None:intergenic | 45.0% | |
| CCAGTGACAGATTTCTGAGT+TGG | - | chr3_1:66970182-66970201 | Msa0369630:intron | 45.0% | |
| ACTAGAGTGGGAATTGGCAA+GGG | - | chr3_1:66970330-66970349 | Msa0369630:intron | 45.0% | |
| ATCCCGCTATGCTATAACAC+TGG | + | chr3_1:66971219-66971238 | None:intergenic | 45.0% | |
| GCATGTAGATCACATGGGTT+TGG | + | chr3_1:66971969-66971988 | None:intergenic | 45.0% | |
| GCTAAGGCATGTAGATCACA+TGG | + | chr3_1:66971975-66971994 | None:intergenic | 45.0% | |
| !! | CACAAGTAGCTCTAGATGCA+GGG | + | chr3_1:66972143-66972162 | None:intergenic | 45.0% |
| !! | TCACAAGTAGCTCTAGATGC+AGG | + | chr3_1:66972144-66972163 | None:intergenic | 45.0% |
| CGTGATTACAGATAATGCCG+TGG | + | chr3_1:66972548-66972567 | None:intergenic | 45.0% | |
| TTGGGTGCAGAAAACTACAG+AGG | - | chr3_1:66972633-66972652 | Msa0369630:intron | 45.0% | |
| !!! | GCGGCTGCATTTTAAAACCA+TGG | - | chr3_1:66972917-66972936 | Msa0369630:intron | 45.0% |
| ACACCAAGCACAAAGAACCA+TGG | + | chr3_1:66972937-66972956 | None:intergenic | 45.0% | |
| ! | ATTTGCAGTGCTGTTGGTAG+TGG | - | chr3_1:66973194-66973213 | Msa0369630:intron | 45.0% |
| GAAAGCTACACCAACAACAG+TGG | + | chr3_1:66973367-66973386 | None:intergenic | 45.0% | |
| CAGATGTTAGCGATGCAAGA+AGG | - | chr3_1:66973721-66973740 | Msa0369630:intron | 45.0% | |
| GAAGGAGAGATACTTACACC+AGG | + | chr3_1:66973757-66973776 | None:intergenic | 45.0% | |
| ! | TTTTGCAGGTGAGTAGTCAG+AGG | - | chr3_1:66973870-66973889 | Msa0369630:intron | 45.0% |
| GGATGACACCCAAAACACTT+CGG | - | chr3_1:66973903-66973922 | Msa0369630:intron | 45.0% | |
| GATGACACCCAAAACACTTC+GGG | - | chr3_1:66973904-66973923 | Msa0369630:intron | 45.0% | |
| !! | TTGGGAACCCGAAGTGTTTT+GGG | + | chr3_1:66973914-66973933 | None:intergenic | 45.0% |
| !! | ACAGAAAGAAGCATCTCTCC+AGG | + | chr3_1:66973938-66973957 | None:intergenic | 45.0% |
| GAGATGCTTCTTTCTGTCCA+TGG | - | chr3_1:66973941-66973960 | Msa0369630:intron | 45.0% | |
| ATCACCCCTAGGTGTTTACA+AGG | - | chr3_1:66973964-66973983 | Msa0369630:intron | 45.0% | |
| !! | CATGATAGCGGAACATTGGA+TGG | - | chr3_1:66974532-66974551 | Msa0369630:intron | 45.0% |
| ! | ATAGCGGAACATTGGATGGT+TGG | - | chr3_1:66974536-66974555 | Msa0369630:intron | 45.0% |
| GGCTGACTATAAGCTAACCT+TGG | - | chr3_1:66974724-66974743 | Msa0369630:intron | 45.0% | |
| AAGGGGGAGTGAAACATTTG+AGG | + | chr3_1:66974799-66974818 | None:intergenic | 45.0% | |
| TCATGCATGCAAATCTGCAG+CGG | + | chr3_1:66975040-66975059 | None:intergenic | 45.0% | |
| !!! | ATTTACTATTATTTATTTTA+TGG | + | chr3_1:66972802-66972821 | None:intergenic | 5.0% |
| CCGTGTGTTTGAGAAGAGAG+AGG | + | chr3_1:66969595-66969614 | None:intergenic | 50.0% | |
| AGGAGAGAGGACACTAGAGT+GGG | - | chr3_1:66970318-66970337 | Msa0369630:intron | 50.0% | |
| GAGGACACTAGAGTGGGAAT+TGG | - | chr3_1:66970324-66970343 | Msa0369630:intron | 50.0% | |
| CACTAGAGTGGGAATTGGCA+AGG | - | chr3_1:66970329-66970348 | Msa0369630:intron | 50.0% | |
| GGTGTGTATTGTCGTCCTTG+CGG | + | chr3_1:66972859-66972878 | None:intergenic | 50.0% | |
| TTAAAATGCAGCCGCGGTTG+CGG | + | chr3_1:66972912-66972931 | None:intergenic | 50.0% | |
| CAAGAAGGTCTTCTGACTCC+TGG | - | chr3_1:66973736-66973755 | Msa0369630:intron | 50.0% | |
| !! | CTTGGGAACCCGAAGTGTTT+TGG | + | chr3_1:66973915-66973934 | None:intergenic | 50.0% |
| !! | AGAAGCATCTCTCCAGGCTT+GGG | + | chr3_1:66973932-66973951 | None:intergenic | 50.0% |
| !! | AAGAAGCATCTCTCCAGGCT+TGG | + | chr3_1:66973933-66973952 | None:intergenic | 50.0% |
| AAACACCTAGGGGTGATCCA+TGG | + | chr3_1:66973961-66973980 | None:intergenic | 50.0% | |
| TTGCATGGACTCTCAACAGG+TGG | - | chr3_1:66974408-66974427 | Msa0369630:intron | 50.0% | |
| TTGGTCGTCCTGTTCTTCAC+TGG | - | chr3_1:66974672-66974691 | Msa0369630:intron | 50.0% | |
| GGGGGAGTGAAAATGTGATG+AGG | + | chr3_1:66974764-66974783 | None:intergenic | 50.0% | |
| ATTGTAAGCAGGGACCGACT+AGG | - | chr3_1:66975080-66975099 | Msa0369630:intron | 50.0% | |
| TTGTAAGCAGGGACCGACTA+GGG | - | chr3_1:66975081-66975100 | Msa0369630:intron | 50.0% | |
| GAGGAGAGAGGACACTAGAG+TGG | - | chr3_1:66970317-66970336 | Msa0369630:intron | 55.0% | |
| TCCAATTGCGGATGCTGCCA+CGG | - | chr3_1:66972528-66972547 | Msa0369630:intron | 55.0% | |
| TGCACCCAATGCCCTCGTTA+CGG | + | chr3_1:66972622-66972641 | None:intergenic | 55.0% | |
| AAGGGGCCAAATGGTTGGAC+TGG | - | chr3_1:66973273-66973292 | Msa0369630:intron | 55.0% | |
| TCTGTCCATGGATCACCCCT+AGG | - | chr3_1:66973953-66973972 | Msa0369630:intron | 55.0% | |
| AAACCGCAGCGCCGTAACGA+GGG | - | chr3_1:66972608-66972627 | Msa0369630:intron | 60.0% | |
| !! | AGCGCCGTAACGAGGGCATT+GGG | - | chr3_1:66972615-66972634 | Msa0369630:intron | 60.0% |
| ! | ACACTTCGGGTTCCCAAGCC+TGG | - | chr3_1:66973917-66973936 | Msa0369630:intron | 60.0% |
| GCCGTGGCAGCATCCGCAAT+TGG | + | chr3_1:66972532-66972551 | None:intergenic | 65.0% | |
| GAAACCGCAGCGCCGTAACG+AGG | - | chr3_1:66972607-66972626 | Msa0369630:intron | 65.0% | |
| ATGCCCTCGTTACGGCGCTG+CGG | + | chr3_1:66972614-66972633 | None:intergenic | 65.0% | |
| ! | CAGCGCCGTAACGAGGGCAT+TGG | - | chr3_1:66972614-66972633 | Msa0369630:intron | 65.0% |
| AAAGGCAGCGACCGCAACCG+CGG | - | chr3_1:66972898-66972917 | Msa0369630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 66969525 | 66975820 | 66969525 | ID=Msa0369630;Name=Msa0369630 |
| chr3_1 | mRNA | 66969525 | 66975820 | 66969525 | ID=Msa0369630-mRNA-1;Parent=Msa0369630;Name=Msa0369630-mRNA-1;_AED=0.43;_eAED=0.43;_QI=415|0.62|0.44|0.88|0.12|0.22|9|0|134 |
| chr3_1 | exon | 66969525 | 66969677 | 66969525 | ID=Msa0369630-mRNA-1:exon:13696;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66970054 | 66970067 | 66970054 | ID=Msa0369630-mRNA-1:exon:13695;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66971335 | 66971467 | 66971335 | ID=Msa0369630-mRNA-1:exon:13694;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66971586 | 66971648 | 66971586 | ID=Msa0369630-mRNA-1:exon:13693;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66974803 | 66974831 | 66974803 | ID=Msa0369630-mRNA-1:exon:13692;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66974960 | 66975028 | 66974960 | ID=Msa0369630-mRNA-1:exon:13691;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66975139 | 66975218 | 66975139 | ID=Msa0369630-mRNA-1:exon:13690;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66975304 | 66975345 | 66975304 | ID=Msa0369630-mRNA-1:exon:13689;Parent=Msa0369630-mRNA-1 |
| chr3_1 | exon | 66975584 | 66975820 | 66975584 | ID=Msa0369630-mRNA-1:exon:13688;Parent=Msa0369630-mRNA-1 |
| chr3_1 | five_prime_UTR | 66975584 | 66975820 | 66975584 | ID=Msa0369630-mRNA-1:five_prime_utr;Parent=Msa0369630-mRNA-1 |
| chr3_1 | five_prime_UTR | 66975304 | 66975345 | 66975304 | ID=Msa0369630-mRNA-1:five_prime_utr;Parent=Msa0369630-mRNA-1 |
| chr3_1 | five_prime_UTR | 66975139 | 66975218 | 66975139 | ID=Msa0369630-mRNA-1:five_prime_utr;Parent=Msa0369630-mRNA-1 |
| chr3_1 | five_prime_UTR | 66974973 | 66975028 | 66974973 | ID=Msa0369630-mRNA-1:five_prime_utr;Parent=Msa0369630-mRNA-1 |
| chr3_1 | CDS | 66974960 | 66974972 | 66974960 | ID=Msa0369630-mRNA-1:cds;Parent=Msa0369630-mRNA-1 |
| chr3_1 | CDS | 66974803 | 66974831 | 66974803 | ID=Msa0369630-mRNA-1:cds;Parent=Msa0369630-mRNA-1 |
| chr3_1 | CDS | 66971586 | 66971648 | 66971586 | ID=Msa0369630-mRNA-1:cds;Parent=Msa0369630-mRNA-1 |
| chr3_1 | CDS | 66971335 | 66971467 | 66971335 | ID=Msa0369630-mRNA-1:cds;Parent=Msa0369630-mRNA-1 |
| chr3_1 | CDS | 66970054 | 66970067 | 66970054 | ID=Msa0369630-mRNA-1:cds;Parent=Msa0369630-mRNA-1 |
| chr3_1 | CDS | 66969525 | 66969677 | 66969525 | ID=Msa0369630-mRNA-1:cds;Parent=Msa0369630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
