Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369870 | XP_003601053.1 | 96.684 | 392 | 13 | 0 | 1 | 392 | 1 | 392 | 0.0 | 782 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369870 | sp|Q501F8|WTR32_ARATH | 63.710 | 372 | 125 | 3 | 12 | 376 | 2 | 370 | 5.05e-168 | 477 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369870 | G7J311 | 96.684 | 392 | 13 | 0 | 1 | 392 | 1 | 392 | 0.0 | 782 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0369870 | Msa0464170 | 0.837554 | 4.853961e-57 | -8.615850e-47 |
Msa0369870 | Msa0509620 | 0.832882 | 7.333649e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369870 | MtrunA17_Chr3g0114691 | 96.684 | 392 | 13 | 0 | 1 | 392 | 1 | 392 | 0.0 | 782 |
Msa0369870 | MtrunA17_Chr1g0160171 | 77.957 | 372 | 76 | 5 | 9 | 380 | 7 | 372 | 0.0 | 595 |
Msa0369870 | MtrunA17_Chr7g0263101 | 52.857 | 350 | 156 | 3 | 20 | 365 | 13 | 357 | 2.33e-128 | 374 |
Msa0369870 | MtrunA17_Chr3g0114711 | 46.269 | 402 | 167 | 5 | 1 | 361 | 1 | 394 | 1.34e-125 | 368 |
Msa0369870 | MtrunA17_Chr1g0182291 | 51.149 | 348 | 162 | 3 | 16 | 362 | 11 | 351 | 1.21e-123 | 361 |
Msa0369870 | MtrunA17_Chr7g0255561 | 47.074 | 393 | 194 | 6 | 1 | 390 | 1 | 382 | 5.00e-123 | 361 |
Msa0369870 | MtrunA17_Chr7g0255581 | 47.074 | 393 | 194 | 6 | 1 | 390 | 1 | 382 | 5.00e-123 | 361 |
Msa0369870 | MtrunA17_Chr3g0081421 | 46.842 | 380 | 189 | 6 | 16 | 388 | 13 | 386 | 2.06e-118 | 349 |
Msa0369870 | MtrunA17_Chr3g0114731 | 46.791 | 374 | 192 | 3 | 20 | 390 | 18 | 387 | 1.11e-117 | 347 |
Msa0369870 | MtrunA17_Chr1g0160181 | 49.254 | 335 | 169 | 1 | 14 | 347 | 12 | 346 | 7.10e-114 | 337 |
Msa0369870 | MtrunA17_Chr3g0081511 | 46.257 | 374 | 192 | 5 | 20 | 390 | 17 | 384 | 7.65e-113 | 335 |
Msa0369870 | MtrunA17_Chr8g0354121 | 45.093 | 377 | 194 | 5 | 16 | 389 | 9 | 375 | 1.13e-112 | 335 |
Msa0369870 | MtrunA17_Chr3g0114701 | 40.827 | 387 | 218 | 3 | 13 | 389 | 2 | 387 | 1.44e-98 | 298 |
Msa0369870 | MtrunA17_Chr1g0186611 | 40.058 | 342 | 198 | 3 | 17 | 355 | 13 | 350 | 6.63e-87 | 267 |
Msa0369870 | MtrunA17_Chr1g0171301 | 38.968 | 349 | 196 | 4 | 17 | 356 | 13 | 353 | 1.85e-86 | 266 |
Msa0369870 | MtrunA17_Chr1g0186641 | 40.120 | 334 | 187 | 3 | 16 | 344 | 9 | 334 | 9.62e-86 | 264 |
Msa0369870 | MtrunA17_Chr1g0186601 | 38.182 | 330 | 199 | 3 | 16 | 344 | 12 | 337 | 3.59e-83 | 258 |
Msa0369870 | MtrunA17_Chr1g0186571 | 40.000 | 330 | 193 | 3 | 16 | 344 | 9 | 334 | 9.74e-83 | 256 |
Msa0369870 | MtrunA17_Chr1g0186561 | 38.905 | 347 | 202 | 3 | 17 | 362 | 13 | 350 | 2.98e-82 | 255 |
Msa0369870 | MtrunA17_Chr3g0142131 | 37.092 | 337 | 201 | 2 | 17 | 342 | 17 | 353 | 6.46e-79 | 248 |
Msa0369870 | MtrunA17_Chr1g0184221 | 35.876 | 354 | 189 | 4 | 17 | 347 | 13 | 351 | 1.41e-78 | 246 |
Msa0369870 | MtrunA17_Chr1g0155761 | 32.615 | 371 | 230 | 2 | 17 | 369 | 18 | 386 | 3.00e-75 | 239 |
Msa0369870 | MtrunA17_Chr6g0463971 | 33.429 | 347 | 226 | 3 | 15 | 357 | 11 | 356 | 1.36e-73 | 233 |
Msa0369870 | MtrunA17_Chr3g0129601 | 33.140 | 344 | 229 | 1 | 5 | 347 | 14 | 357 | 1.58e-71 | 228 |
Msa0369870 | MtrunA17_Chr2g0278561 | 35.584 | 385 | 227 | 5 | 9 | 389 | 4 | 371 | 2.21e-71 | 229 |
Msa0369870 | MtrunA17_Chr6g0483401 | 35.802 | 324 | 206 | 1 | 29 | 350 | 19 | 342 | 3.27e-70 | 224 |
Msa0369870 | MtrunA17_Chr3g0129571 | 31.933 | 357 | 230 | 4 | 16 | 368 | 3 | 350 | 5.46e-70 | 224 |
Msa0369870 | MtrunA17_Chr1g0177221 | 40.234 | 256 | 149 | 2 | 14 | 268 | 12 | 264 | 8.16e-70 | 220 |
Msa0369870 | MtrunA17_Chr4g0050881 | 34.746 | 354 | 218 | 4 | 13 | 357 | 2 | 351 | 9.68e-69 | 221 |
Msa0369870 | MtrunA17_Chr2g0278551 | 35.780 | 327 | 210 | 0 | 19 | 345 | 11 | 337 | 4.36e-67 | 218 |
Msa0369870 | MtrunA17_Chr2g0284261 | 33.516 | 364 | 227 | 5 | 20 | 376 | 8 | 363 | 1.60e-66 | 215 |
Msa0369870 | MtrunA17_Chr3g0129591 | 34.104 | 346 | 214 | 4 | 18 | 359 | 3 | 338 | 7.55e-66 | 213 |
Msa0369870 | MtrunA17_Chr8g0383731 | 33.134 | 335 | 220 | 1 | 16 | 346 | 1 | 335 | 3.35e-65 | 211 |
Msa0369870 | MtrunA17_Chr2g0310441 | 34.986 | 363 | 218 | 5 | 21 | 381 | 11 | 357 | 4.68e-65 | 211 |
Msa0369870 | MtrunA17_Chr2g0290611 | 33.233 | 331 | 221 | 0 | 15 | 345 | 7 | 337 | 1.48e-64 | 210 |
Msa0369870 | MtrunA17_Chr2g0278541 | 34.384 | 349 | 221 | 3 | 19 | 360 | 11 | 358 | 6.61e-64 | 209 |
Msa0369870 | MtrunA17_Chr4g0050891 | 34.769 | 325 | 205 | 3 | 16 | 335 | 9 | 331 | 1.33e-63 | 207 |
Msa0369870 | MtrunA17_Chr1g0164831 | 33.923 | 339 | 213 | 4 | 20 | 352 | 3 | 336 | 1.23e-62 | 204 |
Msa0369870 | MtrunA17_Chr7g0271561 | 34.503 | 342 | 205 | 4 | 18 | 347 | 5 | 339 | 5.30e-62 | 204 |
Msa0369870 | MtrunA17_Chr8g0334761 | 33.645 | 321 | 210 | 2 | 21 | 340 | 11 | 329 | 5.45e-62 | 203 |
Msa0369870 | MtrunA17_Chr8g0334771 | 34.521 | 365 | 220 | 6 | 21 | 381 | 11 | 360 | 6.50e-62 | 203 |
Msa0369870 | MtrunA17_Chr3g0129581 | 32.609 | 368 | 231 | 4 | 18 | 381 | 3 | 357 | 8.12e-62 | 203 |
Msa0369870 | MtrunA17_Chr3g0126101 | 36.513 | 304 | 188 | 3 | 44 | 347 | 30 | 328 | 9.41e-62 | 202 |
Msa0369870 | MtrunA17_Chr4g0051021 | 32.320 | 362 | 242 | 1 | 9 | 367 | 3 | 364 | 7.92e-61 | 201 |
Msa0369870 | MtrunA17_Chr4g0050941 | 35.015 | 337 | 213 | 3 | 16 | 346 | 8 | 344 | 3.56e-60 | 199 |
Msa0369870 | MtrunA17_Chr4g0059311 | 32.923 | 325 | 204 | 2 | 45 | 363 | 37 | 353 | 8.59e-59 | 195 |
Msa0369870 | MtrunA17_Chr5g0413961 | 33.235 | 340 | 216 | 6 | 7 | 344 | 2 | 332 | 2.69e-56 | 188 |
Msa0369870 | MtrunA17_Chr5g0413941 | 35.168 | 327 | 203 | 5 | 24 | 347 | 11 | 331 | 2.96e-56 | 188 |
Msa0369870 | MtrunA17_Chr2g0332001 | 32.448 | 339 | 224 | 4 | 19 | 356 | 37 | 371 | 5.00e-56 | 189 |
Msa0369870 | MtrunA17_Chr5g0408031 | 33.431 | 341 | 211 | 2 | 17 | 342 | 7 | 346 | 6.98e-56 | 188 |
Msa0369870 | MtrunA17_Chr8g0334751 | 33.956 | 321 | 209 | 2 | 21 | 340 | 12 | 330 | 1.98e-54 | 183 |
Msa0369870 | MtrunA17_Chr5g0408001 | 31.707 | 369 | 234 | 4 | 20 | 372 | 10 | 376 | 6.52e-54 | 183 |
Msa0369870 | MtrunA17_Chr5g0408041 | 32.615 | 371 | 231 | 4 | 19 | 372 | 10 | 378 | 6.79e-54 | 183 |
Msa0369870 | MtrunA17_Chr4g0073241 | 29.706 | 340 | 229 | 4 | 21 | 356 | 9 | 342 | 6.08e-53 | 180 |
Msa0369870 | MtrunA17_Chr5g0413921 | 33.025 | 324 | 203 | 5 | 25 | 342 | 12 | 327 | 1.40e-52 | 178 |
Msa0369870 | MtrunA17_Chr7g0227921 | 35.197 | 304 | 189 | 5 | 46 | 346 | 37 | 335 | 2.21e-52 | 178 |
Msa0369870 | MtrunA17_Chr1g0160111 | 30.952 | 336 | 212 | 3 | 29 | 353 | 16 | 342 | 3.10e-52 | 178 |
Msa0369870 | MtrunA17_Chr5g0407971 | 31.638 | 354 | 222 | 4 | 20 | 357 | 11 | 360 | 5.10e-52 | 178 |
Msa0369870 | MtrunA17_Chr5g0413951 | 33.667 | 300 | 195 | 3 | 44 | 342 | 31 | 327 | 4.45e-51 | 174 |
Msa0369870 | MtrunA17_Chr4g0050931 | 30.539 | 334 | 188 | 3 | 16 | 344 | 8 | 302 | 3.26e-49 | 169 |
Msa0369870 | MtrunA17_Chr5g0407991 | 31.250 | 336 | 217 | 2 | 20 | 342 | 9 | 343 | 3.94e-49 | 170 |
Msa0369870 | MtrunA17_Chr5g0413931 | 33.648 | 318 | 196 | 6 | 44 | 358 | 30 | 335 | 1.27e-48 | 168 |
Msa0369870 | MtrunA17_Chr1g0150151 | 28.490 | 351 | 242 | 3 | 17 | 365 | 8 | 351 | 2.54e-47 | 165 |
Msa0369870 | MtrunA17_Chr8g0369841 | 29.464 | 336 | 223 | 2 | 20 | 342 | 9 | 343 | 9.34e-44 | 156 |
Msa0369870 | MtrunA17_Chr5g0428881 | 27.273 | 319 | 231 | 1 | 23 | 340 | 21 | 339 | 2.82e-43 | 155 |
Msa0369870 | MtrunA17_Chr3g0126091 | 25.434 | 346 | 252 | 3 | 18 | 359 | 9 | 352 | 5.40e-40 | 145 |
Msa0369870 | MtrunA17_Chr6g0451211 | 30.887 | 327 | 214 | 5 | 44 | 365 | 36 | 355 | 6.32e-40 | 145 |
Msa0369870 | MtrunA17_Chr4g0051001 | 27.961 | 304 | 218 | 1 | 16 | 318 | 27 | 330 | 2.17e-39 | 143 |
Msa0369870 | MtrunA17_Chr5g0441761 | 25.301 | 332 | 239 | 3 | 24 | 355 | 18 | 340 | 2.29e-39 | 144 |
Msa0369870 | MtrunA17_Chr6g0451201 | 31.818 | 308 | 201 | 4 | 45 | 352 | 37 | 335 | 7.96e-39 | 142 |
Msa0369870 | MtrunA17_Chr5g0404811 | 32.906 | 234 | 149 | 4 | 128 | 357 | 1 | 230 | 1.58e-38 | 139 |
Msa0369870 | MtrunA17_Chr6g0451171 | 29.191 | 346 | 236 | 5 | 21 | 364 | 13 | 351 | 2.17e-38 | 141 |
Msa0369870 | MtrunA17_Chr1g0182261 | 45.033 | 151 | 79 | 4 | 211 | 358 | 78 | 227 | 5.52e-37 | 134 |
Msa0369870 | MtrunA17_Chr1g0182261 | 36.585 | 82 | 52 | 0 | 9 | 90 | 3 | 84 | 2.75e-13 | 68.9 |
Msa0369870 | MtrunA17_Chr6g0451251 | 31.722 | 331 | 213 | 7 | 45 | 371 | 37 | 358 | 7.53e-36 | 134 |
Msa0369870 | MtrunA17_Chr3g0084091 | 29.098 | 244 | 164 | 2 | 101 | 340 | 11 | 249 | 1.72e-35 | 132 |
Msa0369870 | MtrunA17_Chr6g0451261 | 25.568 | 352 | 248 | 4 | 10 | 350 | 1 | 349 | 6.15e-34 | 134 |
Msa0369870 | MtrunA17_Chr5g0399281 | 28.319 | 339 | 235 | 6 | 25 | 359 | 13 | 347 | 6.32e-34 | 129 |
Msa0369870 | MtrunA17_Chr1g0211801 | 28.571 | 252 | 171 | 3 | 20 | 268 | 11 | 256 | 2.92e-33 | 125 |
Msa0369870 | MtrunA17_Chr6g0451191 | 31.897 | 232 | 141 | 3 | 134 | 359 | 1 | 221 | 4.21e-32 | 121 |
Msa0369870 | MtrunA17_Chr2g0278021 | 33.790 | 219 | 136 | 3 | 134 | 345 | 1 | 217 | 5.07e-32 | 122 |
Msa0369870 | MtrunA17_Chr5g0429001 | 24.585 | 301 | 220 | 3 | 72 | 365 | 3 | 303 | 5.90e-32 | 123 |
Msa0369870 | MtrunA17_Chr4g0056081 | 27.660 | 329 | 232 | 6 | 25 | 348 | 19 | 346 | 8.17e-31 | 120 |
Msa0369870 | MtrunA17_Chr8g0334711 | 33.668 | 199 | 128 | 3 | 21 | 218 | 11 | 206 | 1.48e-27 | 108 |
Msa0369870 | MtrunA17_Chr1g0177231 | 52.128 | 94 | 43 | 1 | 266 | 359 | 26 | 117 | 1.53e-26 | 103 |
Msa0369870 | MtrunA17_Chr1g0172891 | 52.809 | 89 | 40 | 1 | 271 | 359 | 9 | 95 | 1.22e-24 | 97.4 |
Msa0369870 | MtrunA17_Chr1g0172881 | 32.099 | 162 | 96 | 3 | 108 | 268 | 1 | 149 | 1.36e-24 | 98.6 |
Msa0369870 | MtrunA17_Chr8g0334721 | 38.532 | 109 | 67 | 0 | 232 | 340 | 1 | 109 | 4.81e-21 | 89.4 |
Msa0369870 | MtrunA17_Chr8g0334731 | 31.000 | 200 | 113 | 5 | 21 | 217 | 12 | 189 | 3.03e-19 | 85.1 |
Msa0369870 | MtrunA17_Chr4g0050911 | 39.683 | 126 | 69 | 2 | 97 | 215 | 8 | 133 | 4.90e-19 | 83.6 |
Msa0369870 | MtrunA17_Chr5g0404801 | 34.483 | 116 | 76 | 0 | 18 | 133 | 5 | 120 | 5.54e-19 | 82.4 |
Msa0369870 | MtrunA17_Chr2g0278031 | 33.621 | 116 | 77 | 0 | 16 | 131 | 10 | 125 | 2.18e-16 | 75.1 |
Msa0369870 | MtrunA17_Chr4g0050921 | 33.333 | 99 | 66 | 0 | 220 | 318 | 3 | 101 | 4.40e-15 | 71.6 |
Msa0369870 | MtrunA17_Chr6g0451241 | 51.667 | 60 | 29 | 0 | 285 | 344 | 24 | 83 | 4.86e-14 | 68.2 |
Msa0369870 | MtrunA17_Chr1g0211811 | 39.437 | 71 | 43 | 0 | 273 | 343 | 4 | 74 | 1.03e-13 | 66.2 |
Msa0369870 | MtrunA17_Chr8g0372571 | 44.444 | 63 | 28 | 1 | 248 | 303 | 2 | 64 | 7.70e-12 | 60.8 |
Msa0369870 | MtrunA17_Chr4g0021721 | 55.556 | 45 | 20 | 0 | 248 | 292 | 2 | 46 | 9.20e-12 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369870 | AT4G08300.1 | 63.710 | 372 | 125 | 3 | 12 | 376 | 2 | 370 | 5.14e-169 | 477 |
Msa0369870 | AT1G44800.1 | 62.222 | 360 | 131 | 3 | 12 | 369 | 2 | 358 | 4.46e-161 | 457 |
Msa0369870 | AT1G21890.1 | 58.290 | 386 | 147 | 4 | 15 | 392 | 5 | 384 | 1.65e-156 | 446 |
Msa0369870 | AT1G21890.2 | 62.701 | 311 | 109 | 1 | 15 | 318 | 5 | 315 | 1.39e-139 | 402 |
Msa0369870 | AT4G08290.1 | 45.455 | 363 | 198 | 0 | 14 | 376 | 6 | 368 | 1.03e-122 | 360 |
Msa0369870 | AT2G37460.1 | 48.108 | 370 | 185 | 5 | 16 | 383 | 10 | 374 | 2.32e-122 | 359 |
Msa0369870 | AT2G39510.1 | 51.811 | 359 | 165 | 3 | 16 | 368 | 3 | 359 | 5.07e-122 | 358 |
Msa0369870 | AT5G07050.1 | 44.675 | 385 | 195 | 3 | 14 | 392 | 11 | 383 | 1.95e-112 | 335 |
Msa0369870 | AT5G13670.1 | 47.112 | 329 | 169 | 4 | 16 | 341 | 3 | 329 | 5.59e-102 | 307 |
Msa0369870 | AT2G40900.1 | 43.675 | 332 | 174 | 3 | 20 | 345 | 10 | 334 | 2.55e-100 | 303 |
Msa0369870 | AT3G56620.1 | 44.340 | 318 | 171 | 1 | 20 | 337 | 10 | 321 | 3.32e-99 | 300 |
Msa0369870 | AT2G37450.2 | 46.667 | 345 | 153 | 6 | 14 | 354 | 2 | 319 | 1.04e-95 | 290 |
Msa0369870 | AT4G08290.2 | 46.275 | 255 | 137 | 0 | 14 | 268 | 6 | 260 | 2.80e-84 | 258 |
Msa0369870 | AT3G18200.2 | 36.522 | 345 | 215 | 2 | 3 | 347 | 17 | 357 | 1.79e-79 | 249 |
Msa0369870 | AT1G75500.1 | 35.450 | 378 | 225 | 8 | 3 | 365 | 2 | 375 | 3.88e-78 | 246 |
Msa0369870 | AT1G75500.2 | 35.450 | 378 | 225 | 8 | 3 | 365 | 2 | 375 | 3.88e-78 | 246 |
Msa0369870 | AT3G53210.1 | 37.309 | 327 | 202 | 2 | 17 | 342 | 6 | 330 | 2.49e-74 | 236 |
Msa0369870 | AT2G37450.3 | 52.941 | 238 | 103 | 4 | 106 | 340 | 1 | 232 | 3.51e-74 | 232 |
Msa0369870 | AT4G30420.2 | 34.347 | 329 | 209 | 4 | 16 | 340 | 4 | 329 | 3.21e-66 | 215 |
Msa0369870 | AT4G30420.1 | 34.472 | 322 | 204 | 4 | 23 | 340 | 1 | 319 | 2.29e-64 | 210 |
Msa0369870 | AT5G64700.1 | 33.239 | 352 | 212 | 3 | 20 | 361 | 7 | 345 | 5.13e-64 | 209 |
Msa0369870 | AT3G30340.1 | 35.370 | 311 | 197 | 2 | 45 | 355 | 35 | 341 | 1.09e-63 | 208 |
Msa0369870 | AT1G09380.1 | 33.690 | 374 | 233 | 3 | 21 | 389 | 8 | 371 | 4.88e-63 | 207 |
Msa0369870 | AT1G43650.1 | 34.311 | 341 | 211 | 3 | 20 | 357 | 6 | 336 | 3.27e-62 | 204 |
Msa0369870 | AT2G37450.1 | 45.221 | 272 | 129 | 9 | 78 | 340 | 5 | 265 | 2.01e-61 | 200 |
Msa0369870 | AT3G53210.2 | 40.081 | 247 | 145 | 2 | 97 | 342 | 29 | 273 | 2.27e-58 | 192 |
Msa0369870 | AT4G28040.1 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.63e-54 | 183 |
Msa0369870 | AT4G28040.5 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.63e-54 | 183 |
Msa0369870 | AT4G28040.3 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.63e-54 | 183 |
Msa0369870 | AT4G28040.4 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.63e-54 | 183 |
Msa0369870 | AT4G28040.2 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.63e-54 | 183 |
Msa0369870 | AT3G53210.3 | 35.798 | 257 | 162 | 2 | 17 | 272 | 6 | 260 | 4.31e-54 | 180 |
Msa0369870 | AT1G25270.1 | 31.781 | 365 | 224 | 4 | 19 | 369 | 1 | 354 | 7.11e-54 | 182 |
Msa0369870 | AT3G18200.1 | 39.301 | 229 | 135 | 2 | 119 | 347 | 3 | 227 | 1.44e-53 | 178 |
Msa0369870 | AT1G01070.1 | 33.636 | 330 | 202 | 7 | 46 | 365 | 41 | 363 | 2.51e-51 | 176 |
Msa0369870 | AT5G40240.1 | 29.859 | 355 | 239 | 5 | 17 | 367 | 16 | 364 | 4.52e-51 | 175 |
Msa0369870 | AT5G40240.3 | 29.859 | 355 | 239 | 5 | 17 | 367 | 16 | 364 | 4.52e-51 | 175 |
Msa0369870 | AT5G40240.2 | 29.859 | 355 | 239 | 5 | 17 | 367 | 30 | 378 | 6.46e-51 | 175 |
Msa0369870 | AT4G01440.1 | 29.260 | 311 | 200 | 3 | 46 | 347 | 35 | 334 | 6.83e-51 | 175 |
Msa0369870 | AT1G68170.2 | 30.484 | 351 | 235 | 2 | 17 | 358 | 9 | 359 | 1.33e-48 | 169 |
Msa0369870 | AT1G68170.1 | 30.372 | 349 | 234 | 2 | 19 | 358 | 1 | 349 | 1.21e-47 | 166 |
Msa0369870 | AT4G01430.1 | 29.552 | 335 | 230 | 4 | 46 | 378 | 34 | 364 | 2.10e-47 | 166 |
Msa0369870 | AT5G40230.1 | 28.736 | 348 | 232 | 6 | 17 | 357 | 17 | 355 | 1.17e-46 | 164 |
Msa0369870 | AT5G45370.2 | 30.793 | 328 | 209 | 4 | 34 | 346 | 33 | 357 | 4.09e-45 | 160 |
Msa0369870 | AT5G45370.4 | 30.793 | 328 | 209 | 4 | 34 | 346 | 33 | 357 | 4.09e-45 | 160 |
Msa0369870 | AT5G45370.1 | 30.990 | 313 | 204 | 3 | 34 | 346 | 33 | 333 | 1.85e-44 | 157 |
Msa0369870 | AT3G28050.1 | 30.904 | 343 | 226 | 6 | 17 | 355 | 8 | 343 | 1.92e-44 | 158 |
Msa0369870 | AT4G01440.3 | 29.433 | 282 | 179 | 3 | 46 | 318 | 35 | 305 | 4.52e-44 | 155 |
Msa0369870 | AT1G01070.2 | 33.010 | 309 | 190 | 7 | 67 | 365 | 15 | 316 | 3.11e-43 | 153 |
Msa0369870 | AT1G11450.3 | 30.380 | 316 | 209 | 4 | 46 | 356 | 41 | 350 | 1.46e-42 | 152 |
Msa0369870 | AT5G40210.1 | 28.902 | 346 | 220 | 7 | 24 | 365 | 16 | 339 | 1.62e-41 | 149 |
Msa0369870 | AT3G45870.1 | 30.462 | 325 | 216 | 2 | 20 | 335 | 11 | 334 | 1.72e-41 | 150 |
Msa0369870 | AT1G70260.1 | 27.300 | 337 | 235 | 3 | 18 | 346 | 9 | 343 | 2.32e-41 | 150 |
Msa0369870 | AT1G11450.5 | 30.225 | 311 | 206 | 4 | 51 | 356 | 2 | 306 | 6.67e-41 | 147 |
Msa0369870 | AT1G11460.1 | 30.897 | 301 | 195 | 5 | 46 | 340 | 41 | 334 | 9.01e-41 | 147 |
Msa0369870 | AT3G28070.2 | 30.000 | 260 | 178 | 3 | 104 | 361 | 8 | 265 | 1.13e-39 | 142 |
Msa0369870 | AT3G28100.1 | 29.412 | 289 | 198 | 4 | 72 | 359 | 66 | 349 | 1.27e-39 | 144 |
Msa0369870 | AT4G19185.1 | 28.796 | 382 | 250 | 5 | 22 | 386 | 22 | 398 | 1.62e-39 | 145 |
Msa0369870 | AT3G30340.2 | 34.375 | 224 | 146 | 1 | 45 | 268 | 35 | 257 | 2.34e-39 | 142 |
Msa0369870 | AT3G28070.1 | 30.249 | 281 | 191 | 4 | 83 | 361 | 80 | 357 | 6.97e-39 | 143 |
Msa0369870 | AT1G11450.2 | 30.033 | 303 | 201 | 4 | 59 | 356 | 3 | 299 | 7.95e-39 | 141 |
Msa0369870 | AT3G28080.1 | 28.328 | 293 | 196 | 5 | 72 | 359 | 66 | 349 | 8.75e-39 | 142 |
Msa0369870 | AT4G15540.1 | 28.280 | 343 | 230 | 4 | 17 | 358 | 13 | 340 | 1.06e-38 | 142 |
Msa0369870 | AT4G15540.2 | 28.280 | 343 | 230 | 4 | 17 | 358 | 13 | 340 | 1.06e-38 | 142 |
Msa0369870 | AT3G28080.5 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.14e-38 | 140 |
Msa0369870 | AT3G28080.7 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.14e-38 | 140 |
Msa0369870 | AT3G28080.8 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.14e-38 | 140 |
Msa0369870 | AT3G28080.6 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.14e-38 | 140 |
Msa0369870 | AT5G64700.2 | 31.395 | 258 | 162 | 2 | 20 | 267 | 7 | 259 | 1.24e-38 | 139 |
Msa0369870 | AT3G28130.5 | 32.917 | 240 | 159 | 2 | 104 | 342 | 10 | 248 | 1.47e-38 | 139 |
Msa0369870 | AT3G28130.1 | 32.917 | 240 | 159 | 2 | 104 | 342 | 10 | 248 | 1.47e-38 | 139 |
Msa0369870 | AT5G47470.2 | 29.940 | 334 | 212 | 7 | 28 | 354 | 65 | 383 | 2.49e-38 | 142 |
Msa0369870 | AT5G47470.1 | 29.940 | 334 | 212 | 7 | 28 | 354 | 37 | 355 | 2.96e-38 | 141 |
Msa0369870 | AT5G47470.3 | 30.120 | 332 | 210 | 7 | 28 | 352 | 65 | 381 | 6.70e-38 | 140 |
Msa0369870 | AT4G01430.2 | 30.249 | 281 | 194 | 2 | 46 | 324 | 34 | 314 | 7.10e-38 | 139 |
Msa0369870 | AT3G28080.2 | 29.183 | 257 | 177 | 3 | 104 | 359 | 89 | 341 | 9.51e-38 | 139 |
Msa0369870 | AT3G28130.2 | 32.645 | 242 | 161 | 2 | 104 | 344 | 96 | 336 | 1.66e-37 | 139 |
Msa0369870 | AT1G43650.2 | 34.661 | 251 | 153 | 2 | 20 | 267 | 6 | 248 | 1.77e-37 | 137 |
Msa0369870 | AT4G24980.1 | 32.013 | 303 | 138 | 5 | 35 | 337 | 1 | 235 | 7.09e-37 | 135 |
Msa0369870 | AT4G01440.5 | 29.075 | 227 | 157 | 2 | 122 | 347 | 3 | 226 | 6.84e-35 | 129 |
Msa0369870 | AT4G01440.2 | 29.075 | 227 | 157 | 2 | 122 | 347 | 3 | 226 | 6.84e-35 | 129 |
Msa0369870 | AT3G45870.8 | 29.221 | 308 | 208 | 2 | 20 | 318 | 11 | 317 | 7.76e-35 | 131 |
Msa0369870 | AT4G01440.4 | 29.741 | 232 | 143 | 4 | 46 | 268 | 35 | 255 | 6.02e-34 | 127 |
Msa0369870 | AT4G19185.2 | 29.085 | 306 | 195 | 5 | 98 | 386 | 20 | 320 | 2.55e-33 | 127 |
Msa0369870 | AT5G45370.6 | 31.008 | 258 | 160 | 4 | 104 | 346 | 1 | 255 | 4.57e-32 | 122 |
Msa0369870 | AT5G45370.5 | 31.008 | 258 | 160 | 4 | 104 | 346 | 1 | 255 | 4.57e-32 | 122 |
Msa0369870 | AT1G11450.4 | 29.964 | 277 | 184 | 3 | 46 | 318 | 41 | 311 | 7.46e-32 | 123 |
Msa0369870 | AT1G11450.1 | 29.658 | 263 | 174 | 4 | 99 | 356 | 2 | 258 | 9.85e-32 | 121 |
Msa0369870 | AT1G60050.1 | 24.148 | 352 | 251 | 5 | 17 | 357 | 9 | 355 | 5.96e-31 | 122 |
Msa0369870 | AT4G01450.2 | 28.763 | 299 | 205 | 2 | 46 | 343 | 35 | 326 | 1.22e-30 | 120 |
Msa0369870 | AT3G28070.3 | 29.787 | 235 | 160 | 4 | 86 | 318 | 83 | 314 | 2.41e-29 | 116 |
Msa0369870 | AT4G01450.1 | 27.372 | 274 | 191 | 2 | 46 | 318 | 35 | 301 | 6.20e-29 | 115 |
Msa0369870 | AT3G28070.5 | 27.391 | 230 | 163 | 3 | 134 | 361 | 1 | 228 | 1.29e-28 | 112 |
Msa0369870 | AT3G45870.9 | 29.278 | 263 | 174 | 3 | 20 | 273 | 11 | 270 | 2.12e-28 | 112 |
Msa0369870 | AT3G28080.9 | 26.872 | 227 | 161 | 3 | 134 | 359 | 1 | 223 | 4.64e-28 | 110 |
Msa0369870 | AT4G16620.1 | 26.126 | 333 | 237 | 4 | 29 | 357 | 20 | 347 | 4.76e-28 | 113 |
Msa0369870 | AT3G28130.3 | 30.476 | 210 | 144 | 2 | 134 | 342 | 1 | 209 | 1.27e-27 | 109 |
Msa0369870 | AT4G01450.4 | 27.830 | 212 | 145 | 2 | 46 | 256 | 35 | 239 | 1.31e-25 | 104 |
Msa0369870 | AT5G45370.3 | 28.328 | 293 | 183 | 7 | 72 | 346 | 14 | 297 | 2.32e-25 | 105 |
Msa0369870 | AT3G28080.3 | 25.000 | 292 | 153 | 6 | 72 | 359 | 66 | 295 | 2.20e-24 | 102 |
Msa0369870 | AT3G45870.5 | 31.604 | 212 | 135 | 2 | 133 | 335 | 49 | 259 | 3.69e-24 | 102 |
Msa0369870 | AT3G28080.4 | 25.391 | 256 | 134 | 4 | 104 | 359 | 8 | 206 | 4.50e-24 | 99.4 |
Msa0369870 | AT3G28100.3 | 31.633 | 196 | 132 | 2 | 72 | 266 | 66 | 260 | 1.92e-22 | 96.3 |
Msa0369870 | AT4G01430.3 | 25.108 | 231 | 168 | 3 | 149 | 378 | 1 | 227 | 2.73e-22 | 94.7 |
Msa0369870 | AT4G01450.3 | 27.225 | 191 | 133 | 1 | 46 | 236 | 35 | 219 | 4.68e-22 | 94.7 |
Msa0369870 | AT4G16620.4 | 27.059 | 255 | 178 | 3 | 106 | 357 | 1 | 250 | 1.88e-20 | 90.5 |
Msa0369870 | AT4G16620.2 | 27.059 | 255 | 178 | 3 | 106 | 357 | 1 | 250 | 1.88e-20 | 90.5 |
Msa0369870 | AT3G28130.4 | 32.143 | 168 | 112 | 2 | 104 | 270 | 96 | 262 | 2.54e-19 | 87.4 |
Msa0369870 | AT3G45870.2 | 33.803 | 142 | 93 | 1 | 194 | 335 | 43 | 183 | 2.77e-18 | 83.6 |
Msa0369870 | AT3G45870.6 | 29.744 | 195 | 127 | 2 | 133 | 318 | 49 | 242 | 9.51e-18 | 82.4 |
Msa0369870 | AT3G45870.7 | 29.744 | 195 | 127 | 2 | 133 | 318 | 49 | 242 | 9.51e-18 | 82.4 |
Msa0369870 | AT4G16620.3 | 25.837 | 209 | 150 | 2 | 29 | 236 | 20 | 224 | 4.64e-17 | 80.9 |
Msa0369870 | AT3G28100.2 | 32.716 | 162 | 108 | 1 | 74 | 235 | 68 | 228 | 9.07e-17 | 79.7 |
Msa0369870 | AT3G28130.6 | 46.875 | 64 | 34 | 0 | 104 | 167 | 96 | 159 | 1.25e-12 | 67.0 |
Msa0369870 | AT3G45870.4 | 29.730 | 148 | 92 | 3 | 135 | 273 | 4 | 148 | 2.06e-11 | 62.4 |
Msa0369870 | AT3G45870.3 | 30.000 | 150 | 93 | 3 | 133 | 273 | 49 | 195 | 3.41e-11 | 62.8 |
Find 111 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAACGGTTGTAACCGTTTC+TGG | 0.099220 | 3_1:-67210807 | Msa0369870:CDS |
ACCAACCATCCGACCAAAAT+TGG | 0.126615 | 3_1:-67210695 | Msa0369870:CDS |
TTATAATGGCTCTCACTTTC+AGG | 0.165762 | 3_1:-67211314 | Msa0369870:intron |
TCAACTTACCATTAGCATTT+TGG | 0.175930 | 3_1:+67213253 | None:intergenic |
CACAGCGTAGCCAAAGTAAT+TGG | 0.236548 | 3_1:-67210828 | Msa0369870:CDS |
GCTATATTGTCCCTTCAATT+TGG | 0.246893 | 3_1:-67213192 | Msa0369870:CDS |
GGGGCTATTATCATTGTTAT+TGG | 0.280031 | 3_1:-67209716 | Msa0369870:CDS |
TTGTGCCCATCACCCAATTT+TGG | 0.297815 | 3_1:+67210682 | None:intergenic |
CCCTGCCTATCAGATTATAA+AGG | 0.359273 | 3_1:-67210757 | Msa0369870:CDS |
ATCAAGAATGGTACAAAATC+AGG | 0.362733 | 3_1:-67209605 | Msa0369870:CDS |
TGGTTGGTCGGTTGCGGCGG+AGG | 0.363419 | 3_1:+67210710 | None:intergenic |
GGCGGAGGCGTGGTGGTTGA+TGG | 0.372027 | 3_1:+67210725 | None:intergenic |
CTATTGGTCTATGGAAGCAC+TGG | 0.378609 | 3_1:+67213288 | None:intergenic |
TTGGTCTTTACACTGTGGTA+TGG | 0.380721 | 3_1:-67209697 | Msa0369870:CDS |
TGGTCTTTACACTGTGGTAT+GGG | 0.382522 | 3_1:-67209696 | Msa0369870:CDS |
TCTTGATTGGCAATTGATCC+TGG | 0.385333 | 3_1:+67209621 | None:intergenic |
AACAGCATGGATTTGCTTGA+TGG | 0.386644 | 3_1:-67210232 | Msa0369870:CDS |
GTCCCTTCAATTTGGTTACT+CGG | 0.389202 | 3_1:-67213184 | Msa0369870:CDS |
TGATACACACACAAAACTAT+AGG | 0.396660 | 3_1:+67213314 | None:intergenic |
TGCTTGATGGGTATTATTGA+GGG | 0.399691 | 3_1:-67210219 | Msa0369870:CDS |
TATATCAAGTTGTTGTAGTT+GGG | 0.408362 | 3_1:-67210652 | Msa0369870:CDS |
GGGGATGTACATCATTACTA+TGG | 0.409950 | 3_1:-67213163 | Msa0369870:CDS |
GTCGGATGGTTGGTCGGTTG+CGG | 0.410621 | 3_1:+67210704 | None:intergenic |
CCCTTTATAATCTGATAGGC+AGG | 0.412069 | 3_1:+67210756 | None:intergenic |
TTGCTTGATGGGTATTATTG+AGG | 0.412527 | 3_1:-67210220 | Msa0369870:CDS |
TTATATCAAGTTGTTGTAGT+TGG | 0.418246 | 3_1:-67210653 | Msa0369870:CDS |
TCCCTTCAATTTGGTTACTC+GGG | 0.419264 | 3_1:-67213183 | Msa0369870:CDS |
TTATGTGAATTGTGAGTTTG+TGG | 0.433308 | 3_1:+67213337 | None:intergenic |
TACAACCGTTCCAATTACTT+TGG | 0.433847 | 3_1:+67210818 | None:intergenic |
CGCGAAGACACATCAGAAAT+CGG | 0.437254 | 3_1:-67209656 | Msa0369870:CDS |
CTTCATCATCATGCTTATGT+TGG | 0.457098 | 3_1:+67209509 | None:intergenic |
CCAACCATCCGACCAAAATT+GGG | 0.458005 | 3_1:-67210694 | Msa0369870:CDS |
CCCCATCTTCCTGAGGATAG+TGG | 0.460250 | 3_1:-67212751 | Msa0369870:CDS |
TCCTCCCTTTATAATCTGAT+AGG | 0.461593 | 3_1:+67210752 | None:intergenic |
TTAGCTGAACAAGTTCATCT+TGG | 0.461729 | 3_1:-67209872 | Msa0369870:CDS |
TCAAGTTGTTGTAGTTGGGC+TGG | 0.467278 | 3_1:-67210648 | Msa0369870:CDS |
GCCACTATCCTCAGGAAGAT+GGG | 0.467307 | 3_1:+67212750 | None:intergenic |
TCAAACATGGTATGAGCCAT+TGG | 0.469056 | 3_1:-67213134 | Msa0369870:CDS |
GCCATTATAAAAGTAATAGC+TGG | 0.469113 | 3_1:+67211327 | None:intergenic |
ATGGAGGGCCAAAATGCTAA+TGG | 0.472069 | 3_1:-67213261 | Msa0369870:CDS |
TTTCATAACCTCTAGCAGAT+AGG | 0.473104 | 3_1:+67209448 | None:intergenic |
TGCCACTATCCTCAGGAAGA+TGG | 0.473679 | 3_1:+67212749 | None:intergenic |
GCTGTTAGTGATAGCTCTGC+TGG | 0.478245 | 3_1:+67210249 | None:intergenic |
CCTGCCTATCAGATTATAAA+GGG | 0.479362 | 3_1:-67210756 | Msa0369870:CDS |
AAGATGGGGAGAGTCATCTT+TGG | 0.484154 | 3_1:+67212765 | None:intergenic |
GGGTCATAGGTTGGGACTCA+AGG | 0.484228 | 3_1:-67210155 | Msa0369870:CDS |
ATGATTATCACTGCTGCATT+GGG | 0.487028 | 3_1:-67209905 | Msa0369870:CDS |
TCAGGTTAGAGTCAGTGAAC+TGG | 0.496846 | 3_1:-67210860 | Msa0369870:intron |
AACCAGGGTGTGATATGCTC+TGG | 0.500988 | 3_1:-67210004 | Msa0369870:intron |
TGTAACCGTTTCTGGAGCTA+TGG | 0.502540 | 3_1:-67210799 | Msa0369870:CDS |
GGTCGGTTGCGGCGGAGGCG+TGG | 0.507173 | 3_1:+67210715 | None:intergenic |
AGGAATCAAAAGTATTAGAA+AGG | 0.508788 | 3_1:+67209282 | None:intergenic |
TTCCTGAGGATAGTGGCACT+TGG | 0.515982 | 3_1:-67212744 | Msa0369870:CDS |
CTGAACAAGTTCATCTTGGA+AGG | 0.517537 | 3_1:-67209868 | Msa0369870:intron |
GATCAATTGCCAATCAAGAA+TGG | 0.518861 | 3_1:-67209617 | Msa0369870:CDS |
TTTCAATTTACCTTCCTAAG+TGG | 0.520067 | 3_1:-67209401 | Msa0369870:three_prime_UTR |
CTTTCGCGCTTGTGCTCGAA+AGG | 0.520412 | 3_1:-67213065 | Msa0369870:intron |
TCCCCGAGTAACCAAATTGA+AGG | 0.524768 | 3_1:+67213181 | None:intergenic |
AATCGGAAAAGGTGAAGGCC+AGG | 0.528245 | 3_1:-67209639 | Msa0369870:CDS |
GGATGGTTGGTCGGTTGCGG+CGG | 0.533490 | 3_1:+67210707 | None:intergenic |
TATGATTATCACTGCTGCAT+TGG | 0.533858 | 3_1:-67209906 | Msa0369870:CDS |
GACATGAGTGTGTGGGTCAT+AGG | 0.533991 | 3_1:-67210168 | Msa0369870:CDS |
ATCCGACCAAAATTGGGTGA+TGG | 0.535831 | 3_1:-67210688 | Msa0369870:CDS |
TCCGACCAAAATTGGGTGAT+GGG | 0.536429 | 3_1:-67210687 | Msa0369870:CDS |
GACACATCAGAAATCGGAAA+AGG | 0.539504 | 3_1:-67209650 | Msa0369870:CDS |
CTTTCGAGCACAAGCGCGAA+AGG | 0.544006 | 3_1:+67213066 | None:intergenic |
TATGTGAATTGTGAGTTTGT+GGG | 0.548106 | 3_1:+67213338 | None:intergenic |
GGAATGGCATATTATGTACA+AGG | 0.549854 | 3_1:-67209983 | Msa0369870:CDS |
GAGTGTGTGGGTCATAGGTT+GGG | 0.550997 | 3_1:-67210163 | Msa0369870:CDS |
AGGGACAATATAGCAAGGTA+TGG | 0.553205 | 3_1:+67213201 | None:intergenic |
AACCAAGTGCCACTATCCTC+AGG | 0.556943 | 3_1:+67212742 | None:intergenic |
AAAAGTAAAACCACTTAGGA+AGG | 0.557872 | 3_1:+67209391 | None:intergenic |
CATAACCATAGCTCCAGAAA+CGG | 0.559343 | 3_1:+67210794 | None:intergenic |
TATTGGTCTATGGAAGCACT+GGG | 0.561621 | 3_1:+67213289 | None:intergenic |
CGGTTGCGGCGGAGGCGTGG+TGG | 0.561709 | 3_1:+67210718 | None:intergenic |
CCCTTCAATTTGGTTACTCG+GGG | 0.562657 | 3_1:-67213182 | Msa0369870:CDS |
ATAACATTATACTTTGAGAA+CGG | 0.564806 | 3_1:+67209347 | None:intergenic |
TGAGTGTGTGGGTCATAGGT+TGG | 0.566678 | 3_1:-67210164 | Msa0369870:CDS |
ACAGCATGGATTTGCTTGAT+GGG | 0.567939 | 3_1:-67210231 | Msa0369870:CDS |
CTCCGTGTACCGTCATGTTG+TGG | 0.575393 | 3_1:-67213106 | Msa0369870:CDS |
AGATCAAAACTTGTACAACA+TGG | 0.579557 | 3_1:-67211400 | Msa0369870:CDS |
AAATAAAAGTAAAACCACTT+AGG | 0.583365 | 3_1:+67209387 | None:intergenic |
TCAGAAATCGGAAAAGGTGA+AGG | 0.584699 | 3_1:-67209644 | Msa0369870:CDS |
GCTAATGGTAAGTTGAACAA+TGG | 0.587597 | 3_1:-67213246 | Msa0369870:CDS |
GGTCTTTACACTGTGGTATG+GGG | 0.595316 | 3_1:-67209695 | Msa0369870:CDS |
ACTATGGTTTCTTTCAAACA+TGG | 0.599226 | 3_1:-67213147 | Msa0369870:CDS |
GCAGTGATAATCATACATAG+TGG | 0.600906 | 3_1:+67209914 | None:intergenic |
CAGAGCTATCACTAACAGCA+TGG | 0.605816 | 3_1:-67210245 | Msa0369870:CDS |
GGCCACAACATGACGGTACA+CGG | 0.607059 | 3_1:+67213104 | None:intergenic |
TATCAGATTATAAAGGGAGG+AGG | 0.609311 | 3_1:-67210750 | Msa0369870:CDS |
GATCAAAACTTGTACAACAT+GGG | 0.613658 | 3_1:-67211399 | Msa0369870:CDS |
CCTTTATAATCTGATAGGCA+GGG | 0.618911 | 3_1:+67210757 | None:intergenic |
TGTTATTGGTCTTTACACTG+TGG | 0.629869 | 3_1:-67209702 | Msa0369870:CDS |
TTATAAAAGTAATAGCTGGA+AGG | 0.634915 | 3_1:+67211331 | None:intergenic |
CCACTATCCTCAGGAAGATG+GGG | 0.640156 | 3_1:+67212751 | None:intergenic |
GAAAGGAGTAATTATAATTG+CGG | 0.640420 | 3_1:+67213083 | None:intergenic |
GGGTGTGATATGCTCTGGAA+TGG | 0.640880 | 3_1:-67209999 | Msa0369870:CDS |
GCCTATCAGATTATAAAGGG+AGG | 0.643212 | 3_1:-67210753 | Msa0369870:CDS |
CCCCGAGTAACCAAATTGAA+GGG | 0.651140 | 3_1:+67213182 | None:intergenic |
TTGAAAGAGACATGAGTGTG+TGG | 0.655962 | 3_1:-67210176 | Msa0369870:CDS |
ATTGAAGGGACAATATAGCA+AGG | 0.656111 | 3_1:+67213196 | None:intergenic |
GAATGGCATATTATGTACAA+GGG | 0.658299 | 3_1:-67209982 | Msa0369870:CDS |
ATGGTTATGACTTTGTACAA+AGG | 0.661239 | 3_1:-67210780 | Msa0369870:CDS |
TAATTGCGGCCACAACATGA+CGG | 0.665558 | 3_1:+67213097 | None:intergenic |
TGACTCTCCCCATCTTCCTG+AGG | 0.673443 | 3_1:-67212758 | Msa0369870:CDS |
CGTAGCCAAAGTAATTGGAA+CGG | 0.674504 | 3_1:-67210823 | Msa0369870:CDS |
AATGGCATATTATGTACAAG+GGG | 0.679044 | 3_1:-67209981 | Msa0369870:CDS |
TGAAAGAGACATGAGTGTGT+GGG | 0.686987 | 3_1:-67210175 | Msa0369870:CDS |
AGCTGGAAGGACATTAACAG+TGG | 0.704261 | 3_1:+67211344 | None:intergenic |
GGGGTTGTAACTAGAGAACG+TGG | 0.715948 | 3_1:-67209962 | Msa0369870:CDS |
GGTACACGGAGAGAATCCAA+TGG | 0.752925 | 3_1:+67213118 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTACTATTTATTTAGTAAA+AGG | - | chr3_1:67211020-67211039 | Msa0369870:intron | 10.0% |
!!! | TTTTTTGTTTTTTTTTTTTC+CGG | - | chr3_1:67211111-67211130 | Msa0369870:intron | 10.0% |
!! | TATTATAAAAAAAGATTCAT+TGG | + | chr3_1:67211684-67211703 | None:intergenic | 10.0% |
!!! | TATTATTTTACTAATTAATC+AGG | - | chr3_1:67211743-67211762 | Msa0369870:intron | 10.0% |
!!! | AGATCAAATTTTAATTTTTT+TGG | + | chr3_1:67212093-67212112 | None:intergenic | 10.0% |
!! | CTCTAATTTAATTAAAATAT+TGG | - | chr3_1:67212833-67212852 | Msa0369870:intron | 10.0% |
!!! | TTCATTTTTTATAGTATATT+TGG | - | chr3_1:67212884-67212903 | Msa0369870:intron | 10.0% |
!!! | TCATTTTTTATAGTATATTT+GGG | - | chr3_1:67212885-67212904 | Msa0369870:intron | 10.0% |
!! | TTTATATTTACAGAAAAACA+AGG | - | chr3_1:67209833-67209852 | Msa0369870:intron | 15.0% |
!!! | AAGAAAGATTATGAATTTTA+TGG | + | chr3_1:67210109-67210128 | None:intergenic | 15.0% |
!! | ATAAAATTCATAATCTTTCT+TGG | - | chr3_1:67210108-67210127 | Msa0369870:intron | 15.0% |
!!! | AAAGAAGATTTAACATTTTT+TGG | - | chr3_1:67210300-67210319 | Msa0369870:intron | 15.0% |
!!! | ATAGTTTAAACATTTTTCTA+TGG | - | chr3_1:67211078-67211097 | Msa0369870:intron | 15.0% |
!! | ATAAAAGATTAGAAAATTAG+AGG | + | chr3_1:67211629-67211648 | None:intergenic | 15.0% |
!! | TTCACTAAGTAAATAAATAA+AGG | + | chr3_1:67212522-67212541 | None:intergenic | 15.0% |
!!! | CATTTTTTATAGTATATTTG+GGG | - | chr3_1:67212886-67212905 | Msa0369870:intron | 15.0% |
!! | TTATTGATAGAGATTAGAAA+CGG | - | chr3_1:67209633-67209652 | Msa0369870:CDS | 20.0% |
!!! | TTTTTTTAAAACCTTTTGCT+TGG | - | chr3_1:67210210-67210229 | Msa0369870:CDS | 20.0% |
!!! | ACCTCTAAAAAAACATTTTT+CGG | - | chr3_1:67210328-67210347 | Msa0369870:intron | 20.0% |
!!! | AGTTTTTTGTACCAAAAAAA+AGG | + | chr3_1:67210387-67210406 | None:intergenic | 20.0% |
!!! | TTTTTTTTGGTACAAAAAAC+TGG | - | chr3_1:67210386-67210405 | Msa0369870:intron | 20.0% |
!!! | ATTCATTTCTATTTGCTTTT+AGG | + | chr3_1:67210428-67210447 | None:intergenic | 20.0% |
!!! | GGATAATATATAGTTTTATG+AGG | - | chr3_1:67210577-67210596 | Msa0369870:intron | 20.0% |
!! | ATATATGAATTGAAGTGATT+AGG | + | chr3_1:67210857-67210876 | None:intergenic | 20.0% |
!!! | TAATATATAAATTGACTCGA+TGG | + | chr3_1:67210890-67210909 | None:intergenic | 20.0% |
!!! | GATGTGATAATATAATTTTC+TGG | - | chr3_1:67210929-67210948 | Msa0369870:intron | 20.0% |
!! | AAATTGTTCCTATAATTCAT+GGG | + | chr3_1:67211001-67211020 | None:intergenic | 20.0% |
!! | AAAATTGTTCCTATAATTCA+TGG | + | chr3_1:67211002-67211021 | None:intergenic | 20.0% |
!!! | AGTTTTTGTTTTTGTTTTCA+TGG | + | chr3_1:67211353-67211372 | None:intergenic | 20.0% |
!! | TTCTAATAAATCTAATGACA+TGG | - | chr3_1:67211708-67211727 | Msa0369870:intron | 20.0% |
!! | TTTGTGATAATTATATAACC+AGG | - | chr3_1:67212601-67212620 | Msa0369870:intron | 20.0% |
!! | TTGTGATAATTATATAACCA+GGG | - | chr3_1:67212602-67212621 | Msa0369870:intron | 20.0% |
!!! | GTTACATATTTTAAGAGAAA+GGG | + | chr3_1:67212784-67212803 | None:intergenic | 20.0% |
!!! | TGTTACATATTTTAAGAGAA+AGG | + | chr3_1:67212785-67212804 | None:intergenic | 20.0% |
!! | AAATAAAAGTAAAACCACTT+AGG | + | chr3_1:67213237-67213256 | None:intergenic | 20.0% |
!!! | ATAACATTATACTTTGAGAA+CGG | + | chr3_1:67213277-67213296 | None:intergenic | 20.0% |
! | GAAAGGAGTAATTATAATTG+CGG | + | chr3_1:67209541-67209560 | None:intergenic | 25.0% |
! | AATTCATAATCTTTCTTGGT+TGG | - | chr3_1:67210112-67210131 | Msa0369870:intron | 25.0% |
! | ATTCATAATCTTTCTTGGTT+GGG | - | chr3_1:67210113-67210132 | Msa0369870:intron | 25.0% |
! | AGGAAATCAAAAAGATTCAT+AGG | - | chr3_1:67210139-67210158 | Msa0369870:CDS | 25.0% |
!!! | ACCGAAAAATGTTTTTTTAG+AGG | + | chr3_1:67210332-67210351 | None:intergenic | 25.0% |
! | TTTGTACCAAAAAAAAGGTA+AGG | + | chr3_1:67210382-67210401 | None:intergenic | 25.0% |
! | AAGAAATGAAATCACACAAT+GGG | + | chr3_1:67210556-67210575 | None:intergenic | 25.0% |
! | TAAGAAATGAAATCACACAA+TGG | + | chr3_1:67210557-67210576 | None:intergenic | 25.0% |
! | ATTGTGTGATTTCATTTCTT+AGG | - | chr3_1:67210556-67210575 | Msa0369870:intron | 25.0% |
!!! | TATATAGTTTTATGAGGCAT+TGG | - | chr3_1:67210583-67210602 | Msa0369870:intron | 25.0% |
!!! | ATATAGTTTTATGAGGCATT+GGG | - | chr3_1:67210584-67210603 | Msa0369870:intron | 25.0% |
! | AATAGCACGAATTAAGATAA+GGG | + | chr3_1:67210788-67210807 | None:intergenic | 25.0% |
! | TTAGCGAGAAAAATAAATTG+TGG | - | chr3_1:67210819-67210838 | Msa0369870:CDS | 25.0% |
! | AATTGTTCCTATAATTCATG+GGG | + | chr3_1:67211000-67211019 | None:intergenic | 25.0% |
! | AGTAAAAGGAACAAGTTATA+AGG | - | chr3_1:67211034-67211053 | Msa0369870:intron | 25.0% |
!! | TTAAACATTTTTCTATGGCT+AGG | - | chr3_1:67211083-67211102 | Msa0369870:intron | 25.0% |
!! | TGTTGTTGATAAAATGAAAC+AGG | - | chr3_1:67211190-67211209 | Msa0369870:intron | 25.0% |
! | TTATAAAAGTAATAGCTGGA+AGG | + | chr3_1:67211293-67211312 | None:intergenic | 25.0% |
!!! | TCCAGCTATTACTTTTATAA+TGG | - | chr3_1:67211293-67211312 | Msa0369870:intron | 25.0% |
!! | TGCTTATCTTAATTCAAGTT+TGG | + | chr3_1:67211569-67211588 | None:intergenic | 25.0% |
!! | TTATATCAAGTTGTTGTAGT+TGG | - | chr3_1:67211968-67211987 | Msa0369870:intron | 25.0% |
!! | TATATCAAGTTGTTGTAGTT+GGG | - | chr3_1:67211969-67211988 | Msa0369870:intron | 25.0% |
! | AGAATATATGTCTTGATGTT+TGG | + | chr3_1:67212030-67212049 | None:intergenic | 25.0% |
!! | GAGAATTAGTTTCTCTATAA+TGG | - | chr3_1:67212164-67212183 | Msa0369870:intron | 25.0% |
!!! | AGATCCATTTTTCAAAGAAA+TGG | - | chr3_1:67212221-67212240 | Msa0369870:intron | 25.0% |
!!! | GATCCATTTTTCAAAGAAAT+GGG | - | chr3_1:67212222-67212241 | Msa0369870:intron | 25.0% |
TGATACACACACAAAACTAT+AGG | + | chr3_1:67209310-67209329 | None:intergenic | 30.0% | |
TCCATAGACCAATAGAAAAA+TGG | - | chr3_1:67209341-67209360 | Msa0369870:three_prime_UTR | 30.0% | |
!! | TCCATTTTTCTATTGGTCTA+TGG | + | chr3_1:67209345-67209364 | None:intergenic | 30.0% |
ATAGACCAATAGAAAAATGG+AGG | - | chr3_1:67209344-67209363 | Msa0369870:three_prime_UTR | 30.0% | |
TAGACCAATAGAAAAATGGA+GGG | - | chr3_1:67209345-67209364 | Msa0369870:three_prime_UTR | 30.0% | |
! | TCAACTTACCATTAGCATTT+TGG | + | chr3_1:67209371-67209390 | None:intergenic | 30.0% |
ACTATGGTTTCTTTCAAACA+TGG | - | chr3_1:67209474-67209493 | Msa0369870:three_prime_UTR | 30.0% | |
GTTGAAAGAGACATAAAAAG+AGG | + | chr3_1:67209604-67209623 | None:intergenic | 30.0% | |
CTTGACAACAAAATTTGAGA+CGG | - | chr3_1:67209702-67209721 | Msa0369870:CDS | 30.0% | |
AAACCTTGTTAAGCTTATGA+AGG | + | chr3_1:67209802-67209821 | None:intergenic | 30.0% | |
TATCTTCATGATCATGAGTT+AGG | - | chr3_1:67209986-67210005 | Msa0369870:CDS | 30.0% | |
!!! | CTAGAACCTTACCTTTTTTT+TGG | - | chr3_1:67210373-67210392 | Msa0369870:intron | 30.0% |
!! | ATTTCTATTTGCTTTTAGGC+TGG | + | chr3_1:67210424-67210443 | None:intergenic | 30.0% |
! | TTTCGTCCTTATGATTTTTG+TGG | + | chr3_1:67210528-67210547 | None:intergenic | 30.0% |
AGAAATGAAATCACACAATG+GGG | + | chr3_1:67210555-67210574 | None:intergenic | 30.0% | |
ATTGTGTAACTTGAAGAGTT+TGG | + | chr3_1:67210673-67210692 | None:intergenic | 30.0% | |
CAATAGCACGAATTAAGATA+AGG | + | chr3_1:67210789-67210808 | None:intergenic | 30.0% | |
CTTATCTTAATTCGTGCTAT+TGG | - | chr3_1:67210787-67210806 | Msa0369870:CDS | 30.0% | |
!! | TACAAGTTTTGATCTAGTAC+TGG | + | chr3_1:67211216-67211235 | None:intergenic | 30.0% |
AGATCAAAACTTGTACAACA+TGG | - | chr3_1:67211221-67211240 | Msa0369870:intron | 30.0% | |
GATCAAAACTTGTACAACAT+GGG | - | chr3_1:67211222-67211241 | Msa0369870:intron | 30.0% | |
GCCATTATAAAAGTAATAGC+TGG | + | chr3_1:67211297-67211316 | None:intergenic | 30.0% | |
GTGTTCCTGGAAAAAATAAT+TGG | - | chr3_1:67211413-67211432 | Msa0369870:intron | 30.0% | |
!!! | GGATTCCAATTATTTTTTCC+AGG | + | chr3_1:67211421-67211440 | None:intergenic | 30.0% |
ATGGTTATGACTTTGTACAA+AGG | - | chr3_1:67211841-67211860 | Msa0369870:intron | 30.0% | |
ATATGTCTTGATGTTTGGTT+TGG | + | chr3_1:67212025-67212044 | None:intergenic | 30.0% | |
AATTCTCACACCATATCTAA+TGG | + | chr3_1:67212151-67212170 | None:intergenic | 30.0% | |
! | TGACCCATTTCTTTGAAAAA+TGG | + | chr3_1:67212228-67212247 | None:intergenic | 30.0% |
!! | TAACTTATGTTGCTACTTTG+TGG | - | chr3_1:67212322-67212341 | Msa0369870:intron | 30.0% |
!! | AACTTATGTTGCTACTTTGT+GGG | - | chr3_1:67212323-67212342 | Msa0369870:intron | 30.0% |
GAATGGCATATTATGTACAA+GGG | - | chr3_1:67212639-67212658 | Msa0369870:intron | 30.0% | |
AATGGCATATTATGTACAAG+GGG | - | chr3_1:67212640-67212659 | Msa0369870:intron | 30.0% | |
! | GATTTTGTACCATTCTTGAT+TGG | + | chr3_1:67213016-67213035 | None:intergenic | 30.0% |
ATCAAGAATGGTACAAAATC+AGG | - | chr3_1:67213016-67213035 | Msa0369870:intron | 30.0% | |
!!! | CCTTTTTTCAATTTTTCAGC+TGG | + | chr3_1:67213076-67213095 | None:intergenic | 30.0% |
CCAGCTGAAAAATTGAAAAA+AGG | - | chr3_1:67213073-67213092 | Msa0369870:CDS | 30.0% | |
! | AGGTTATGAAAGATTTTCTG+CGG | - | chr3_1:67213185-67213204 | Msa0369870:CDS | 30.0% |
TTTCAATTTACCTTCCTAAG+TGG | - | chr3_1:67213220-67213239 | Msa0369870:CDS | 30.0% | |
AAAAGTAAAACCACTTAGGA+AGG | + | chr3_1:67213233-67213252 | None:intergenic | 30.0% | |
TTTGAGAACGGAAAAAGTTA+AGG | + | chr3_1:67213265-67213284 | None:intergenic | 30.0% | |
! | GCTAATGGTAAGTTGAACAA+TGG | - | chr3_1:67209375-67209394 | Msa0369870:three_prime_UTR | 35.0% |
ATTGAAGGGACAATATAGCA+AGG | + | chr3_1:67209428-67209447 | None:intergenic | 35.0% | |
GCTATATTGTCCCTTCAATT+TGG | - | chr3_1:67209429-67209448 | Msa0369870:three_prime_UTR | 35.0% | |
AAAGAGGAAGAAAATGATCG+AGG | + | chr3_1:67209588-67209607 | None:intergenic | 35.0% | |
TTGCCTTCATAAGCTTAACA+AGG | - | chr3_1:67209796-67209815 | Msa0369870:intron | 35.0% | |
GATACTGCGAATATAGCATT+AGG | + | chr3_1:67209936-67209955 | None:intergenic | 35.0% | |
AAATTGCAAGACCAAGCAAA+AGG | + | chr3_1:67210224-67210243 | None:intergenic | 35.0% | |
!! | GCTTTTAGGCTGGTTAAATA+AGG | + | chr3_1:67210414-67210433 | None:intergenic | 35.0% |
! | CTTATGATTTTTGTGGTGGT+GGG | + | chr3_1:67210521-67210540 | None:intergenic | 35.0% |
GCGAGAAAAATAAATTGTGG+AGG | - | chr3_1:67210822-67210841 | Msa0369870:CDS | 35.0% | |
TAGCAATCCCCATGAATTAT+AGG | - | chr3_1:67210990-67211009 | Msa0369870:intron | 35.0% | |
TTATAATGGCTCTCACTTTC+AGG | - | chr3_1:67211307-67211326 | Msa0369870:intron | 35.0% | |
AAACTAATGTGCTTACGCAA+AGG | - | chr3_1:67211368-67211387 | Msa0369870:CDS | 35.0% | |
TCCTCGTCCACTAATTAATA+TGG | + | chr3_1:67211464-67211483 | None:intergenic | 35.0% | |
GTGTGACAAACTAGTAGTAA+GGG | + | chr3_1:67211498-67211517 | None:intergenic | 35.0% | |
AGTGTGACAAACTAGTAGTA+AGG | + | chr3_1:67211499-67211518 | None:intergenic | 35.0% | |
TACAACCGTTCCAATTACTT+TGG | + | chr3_1:67211806-67211825 | None:intergenic | 35.0% | |
CCTTTATAATCTGATAGGCA+GGG | + | chr3_1:67211867-67211886 | None:intergenic | 35.0% | |
CCTGCCTATCAGATTATAAA+GGG | - | chr3_1:67211865-67211884 | Msa0369870:intron | 35.0% | |
TCCTCCCTTTATAATCTGAT+AGG | + | chr3_1:67211872-67211891 | None:intergenic | 35.0% | |
TATCAGATTATAAAGGGAGG+AGG | - | chr3_1:67211871-67211890 | Msa0369870:intron | 35.0% | |
! | TTGCTTGATGGGTATTATTG+AGG | - | chr3_1:67212401-67212420 | Msa0369870:intron | 35.0% |
! | TGCTTGATGGGTATTATTGA+GGG | - | chr3_1:67212402-67212421 | Msa0369870:intron | 35.0% |
GGAATGGCATATTATGTACA+AGG | - | chr3_1:67212638-67212657 | Msa0369870:intron | 35.0% | |
CTGAAAGATGTGACAAAAAC+TGG | + | chr3_1:67212686-67212705 | None:intergenic | 35.0% | |
GCAGTGATAATCATACATAG+TGG | + | chr3_1:67212710-67212729 | None:intergenic | 35.0% | |
TATGATTATCACTGCTGCAT+TGG | - | chr3_1:67212715-67212734 | Msa0369870:intron | 35.0% | |
ATGATTATCACTGCTGCATT+GGG | - | chr3_1:67212716-67212735 | Msa0369870:intron | 35.0% | |
TTAGCTGAACAAGTTCATCT+TGG | - | chr3_1:67212749-67212768 | Msa0369870:CDS | 35.0% | |
GGGGCTATTATCATTGTTAT+TGG | - | chr3_1:67212905-67212924 | Msa0369870:intron | 35.0% | |
!! | TGTTATTGGTCTTTACACTG+TGG | - | chr3_1:67212919-67212938 | Msa0369870:intron | 35.0% |
GATCAATTGCCAATCAAGAA+TGG | - | chr3_1:67213004-67213023 | Msa0369870:intron | 35.0% | |
! | TCAGGATCAGACATTTTTGA+AGG | - | chr3_1:67213034-67213053 | Msa0369870:intron | 35.0% |
CTTCATCATCATGCTTATGT+TGG | + | chr3_1:67213115-67213134 | None:intergenic | 35.0% | |
! | CAATTTTTCCTATCTGCTAG+AGG | - | chr3_1:67213165-67213184 | Msa0369870:CDS | 35.0% |
TTTCATAACCTCTAGCAGAT+AGG | + | chr3_1:67213176-67213195 | None:intergenic | 35.0% | |
!! | TATTGGTCTATGGAAGCACT+GGG | + | chr3_1:67209335-67209354 | None:intergenic | 40.0% |
!! | TTGGCCCTCCATTTTTCTAT+TGG | + | chr3_1:67209352-67209371 | None:intergenic | 40.0% |
AGGGACAATATAGCAAGGTA+TGG | + | chr3_1:67209423-67209442 | None:intergenic | 40.0% | |
GTCCCTTCAATTTGGTTACT+CGG | - | chr3_1:67209437-67209456 | Msa0369870:three_prime_UTR | 40.0% | |
TCCCTTCAATTTGGTTACTC+GGG | - | chr3_1:67209438-67209457 | Msa0369870:three_prime_UTR | 40.0% | |
GGGGATGTACATCATTACTA+TGG | - | chr3_1:67209458-67209477 | Msa0369870:three_prime_UTR | 40.0% | |
TCAAACATGGTATGAGCCAT+TGG | - | chr3_1:67209487-67209506 | Msa0369870:three_prime_UTR | 40.0% | |
AGGAAGAAAATGATCGAGGA+AGG | + | chr3_1:67209584-67209603 | None:intergenic | 40.0% | |
TTTCCTTGAGTAAGGCTCTT+CGG | - | chr3_1:67209900-67209919 | Msa0369870:CDS | 40.0% | |
ACTGCGAATATAGCATTAGG+TGG | + | chr3_1:67209933-67209952 | None:intergenic | 40.0% | |
CATAATCTTTCTTGGTTGGG+TGG | - | chr3_1:67210116-67210135 | Msa0369870:intron | 40.0% | |
GAAAATGCAGGGCAATATGA+GGG | + | chr3_1:67210469-67210488 | None:intergenic | 40.0% | |
AGAAAATGCAGGGCAATATG+AGG | + | chr3_1:67210470-67210489 | None:intergenic | 40.0% | |
! | TATTGCCCTGCATTTTCTAG+CGG | - | chr3_1:67210472-67210491 | Msa0369870:intron | 40.0% |
! | CCTTATGATTTTTGTGGTGG+TGG | + | chr3_1:67210522-67210541 | None:intergenic | 40.0% |
CCACCACCACAAAAATCATA+AGG | - | chr3_1:67210519-67210538 | Msa0369870:intron | 40.0% | |
! | CGTCCTTATGATTTTTGTGG+TGG | + | chr3_1:67210525-67210544 | None:intergenic | 40.0% |
CTGCAATTTGTACTTTGAGC+CGG | + | chr3_1:67211133-67211152 | None:intergenic | 40.0% | |
TAGCTAGAATTGTGTGTTCC+TGG | - | chr3_1:67211400-67211419 | Msa0369870:CDS | 40.0% | |
AATCCGACAATTTCGAACCA+TGG | - | chr3_1:67211436-67211455 | Msa0369870:intron | 40.0% | |
ATCCGACAATTTCGAACCAT+GGG | - | chr3_1:67211437-67211456 | Msa0369870:intron | 40.0% | |
CACTAATTAATATGGCCCCA+TGG | + | chr3_1:67211456-67211475 | None:intergenic | 40.0% | |
CATGGGGCCATATTAATTAG+TGG | - | chr3_1:67211454-67211473 | Msa0369870:intron | 40.0% | |
! | GCCATATTAATTAGTGGACG+AGG | - | chr3_1:67211460-67211479 | Msa0369870:intron | 40.0% |
! | CTAGTTTGTCACACTTTGCA+AGG | - | chr3_1:67211504-67211523 | Msa0369870:intron | 40.0% |
CGTAGCCAAAGTAATTGGAA+CGG | - | chr3_1:67211798-67211817 | Msa0369870:intron | 40.0% | |
CATAACCATAGCTCCAGAAA+CGG | + | chr3_1:67211830-67211849 | None:intergenic | 40.0% | |
CCCTGCCTATCAGATTATAA+AGG | - | chr3_1:67211864-67211883 | Msa0369870:intron | 40.0% | |
CCCTTTATAATCTGATAGGC+AGG | + | chr3_1:67211868-67211887 | None:intergenic | 40.0% | |
GCCTATCAGATTATAAAGGG+AGG | - | chr3_1:67211868-67211887 | Msa0369870:intron | 40.0% | |
ATTGTGGCGACCATTAGATA+TGG | - | chr3_1:67212138-67212157 | Msa0369870:intron | 40.0% | |
! | AACAGCATGGATTTGCTTGA+TGG | - | chr3_1:67212389-67212408 | Msa0369870:intron | 40.0% |
! | ACAGCATGGATTTGCTTGAT+GGG | - | chr3_1:67212390-67212409 | Msa0369870:intron | 40.0% |
TTGAAAGAGACATGAGTGTG+TGG | - | chr3_1:67212445-67212464 | Msa0369870:intron | 40.0% | |
TGAAAGAGACATGAGTGTGT+GGG | - | chr3_1:67212446-67212465 | Msa0369870:intron | 40.0% | |
CTGAACAAGTTCATCTTGGA+AGG | - | chr3_1:67212753-67212772 | Msa0369870:CDS | 40.0% | |
! | TTGGTCTTTACACTGTGGTA+TGG | - | chr3_1:67212924-67212943 | Msa0369870:intron | 40.0% |
TGGTCTTTACACTGTGGTAT+GGG | - | chr3_1:67212925-67212944 | Msa0369870:intron | 40.0% | |
GACACATCAGAAATCGGAAA+AGG | - | chr3_1:67212971-67212990 | Msa0369870:intron | 40.0% | |
TCAGAAATCGGAAAAGGTGA+AGG | - | chr3_1:67212977-67212996 | Msa0369870:intron | 40.0% | |
TCTTGATTGGCAATTGATCC+TGG | + | chr3_1:67213003-67213022 | None:intergenic | 40.0% | |
! | CTATTGGTCTATGGAAGCAC+TGG | + | chr3_1:67209336-67209355 | None:intergenic | 45.0% |
ATGGAGGGCCAAAATGCTAA+TGG | - | chr3_1:67209360-67209379 | Msa0369870:three_prime_UTR | 45.0% | |
CCCCGAGTAACCAAATTGAA+GGG | + | chr3_1:67209442-67209461 | None:intergenic | 45.0% | |
CCCTTCAATTTGGTTACTCG+GGG | - | chr3_1:67209439-67209458 | Msa0369870:three_prime_UTR | 45.0% | |
TCCCCGAGTAACCAAATTGA+AGG | + | chr3_1:67209443-67209462 | None:intergenic | 45.0% | |
TAATTGCGGCCACAACATGA+CGG | + | chr3_1:67209527-67209546 | None:intergenic | 45.0% | |
AAGATGGGGAGAGTCATCTT+TGG | + | chr3_1:67209859-67209878 | None:intergenic | 45.0% | |
GCACTTGGTTTCCTTGAGTA+AGG | - | chr3_1:67209892-67209911 | Msa0369870:CDS | 45.0% | |
TTCCTTGAGTAAGGCTCTTC+GGG | - | chr3_1:67209901-67209920 | Msa0369870:CDS | 45.0% | |
AATCTTTCTTGGTTGGGTGG+AGG | - | chr3_1:67210119-67210138 | Msa0369870:intron | 45.0% | |
TGAGTCCGCTAGAAAATGCA+GGG | + | chr3_1:67210480-67210499 | None:intergenic | 45.0% | |
ATGAGTCCGCTAGAAAATGC+AGG | + | chr3_1:67210481-67210500 | None:intergenic | 45.0% | |
GGTCTTCTACCTCTATTGCA+CGG | - | chr3_1:67210605-67210624 | Msa0369870:intron | 45.0% | |
GTCTTCTACCTCTATTGCAC+GGG | - | chr3_1:67210606-67210625 | Msa0369870:intron | 45.0% | |
TCATTGTACCCGTGCAATAG+AGG | + | chr3_1:67210617-67210636 | None:intergenic | 45.0% | |
GGGGATTGCTAAACAGCTAT+TGG | + | chr3_1:67210981-67211000 | None:intergenic | 45.0% | |
AGCTGGAAGGACATTAACAG+TGG | + | chr3_1:67211280-67211299 | None:intergenic | 45.0% | |
TCCGACAATTTCGAACCATG+GGG | - | chr3_1:67211438-67211457 | Msa0369870:intron | 45.0% | |
TCAGGTTAGAGTCAGTGAAC+TGG | - | chr3_1:67211761-67211780 | Msa0369870:intron | 45.0% | |
CACAGCGTAGCCAAAGTAAT+TGG | - | chr3_1:67211793-67211812 | Msa0369870:intron | 45.0% | |
!! | TGTAACCGTTTCTGGAGCTA+TGG | - | chr3_1:67211822-67211841 | Msa0369870:intron | 45.0% |
!! | ATTTTGGTCGGATGGTTGGT+CGG | + | chr3_1:67211926-67211945 | None:intergenic | 45.0% |
ACCAACCATCCGACCAAAAT+TGG | - | chr3_1:67211926-67211945 | Msa0369870:intron | 45.0% | |
CCAACCATCCGACCAAAATT+GGG | - | chr3_1:67211927-67211946 | Msa0369870:intron | 45.0% | |
!! | ATCACCCAATTTTGGTCGGA+TGG | + | chr3_1:67211934-67211953 | None:intergenic | 45.0% |
ATCCGACCAAAATTGGGTGA+TGG | - | chr3_1:67211933-67211952 | Msa0369870:intron | 45.0% | |
TCCGACCAAAATTGGGTGAT+GGG | - | chr3_1:67211934-67211953 | Msa0369870:intron | 45.0% | |
! | TTGTGCCCATCACCCAATTT+TGG | + | chr3_1:67211942-67211961 | None:intergenic | 45.0% |
! | TCAAGTTGTTGTAGTTGGGC+TGG | - | chr3_1:67211973-67211992 | Msa0369870:intron | 45.0% |
ATAATGGTCCCCACAACTGT+TGG | - | chr3_1:67212180-67212199 | Msa0369870:intron | 45.0% | |
CAGAGCTATCACTAACAGCA+TGG | - | chr3_1:67212376-67212395 | Msa0369870:intron | 45.0% | |
GGTCTTTACACTGTGGTATG+GGG | - | chr3_1:67212926-67212945 | Msa0369870:intron | 45.0% | |
CGCGAAGACACATCAGAAAT+CGG | - | chr3_1:67212965-67212984 | Msa0369870:intron | 45.0% | |
!! | ATAGATAAATAAAATATATT+AGG | + | chr3_1:67210078-67210097 | None:intergenic | 5.0% |
!!! | TATATATTATTTTAAAGTTT+TGG | - | chr3_1:67210901-67210920 | Msa0369870:intron | 5.0% |
GGTACACGGAGAGAATCCAA+TGG | + | chr3_1:67209506-67209525 | None:intergenic | 50.0% | |
CCACTATCCTCAGGAAGATG+GGG | + | chr3_1:67209873-67209892 | None:intergenic | 50.0% | |
GCCACTATCCTCAGGAAGAT+GGG | + | chr3_1:67209874-67209893 | None:intergenic | 50.0% | |
TGCCACTATCCTCAGGAAGA+TGG | + | chr3_1:67209875-67209894 | None:intergenic | 50.0% | |
! | TTCCTGAGGATAGTGGCACT+TGG | - | chr3_1:67209877-67209896 | Msa0369870:CDS | 50.0% |
! | AACCAAGTGCCACTATCCTC+AGG | + | chr3_1:67209882-67209901 | None:intergenic | 50.0% |
ATCCCGAAGAGCCTTACTCA+AGG | + | chr3_1:67209906-67209925 | None:intergenic | 50.0% | |
GTTCTCCATACTCTCTGCAC+GGG | + | chr3_1:67210651-67210670 | None:intergenic | 50.0% | |
GGTTCTCCATACTCTCTGCA+CGG | + | chr3_1:67210652-67210671 | None:intergenic | 50.0% | |
GCCCCATGGTTCGAAATTGT+CGG | + | chr3_1:67211442-67211461 | None:intergenic | 50.0% | |
GGAACGGTTGTAACCGTTTC+TGG | - | chr3_1:67211814-67211833 | Msa0369870:intron | 50.0% | |
!! | CCCAATTTTGGTCGGATGGT+TGG | + | chr3_1:67211930-67211949 | None:intergenic | 50.0% |
!! | GCCCATCACCCAATTTTGGT+CGG | + | chr3_1:67211938-67211957 | None:intergenic | 50.0% |
GATCTCTCACAGCAGTTGCA+CGG | - | chr3_1:67212108-67212127 | Msa0369870:intron | 50.0% | |
GTTGCACGGTGCAACAATTG+TGG | - | chr3_1:67212122-67212141 | Msa0369870:intron | 50.0% | |
! | AGAGCGTTCCAACAGTTGTG+GGG | + | chr3_1:67212191-67212210 | None:intergenic | 50.0% |
! | CAGAGCGTTCCAACAGTTGT+GGG | + | chr3_1:67212192-67212211 | None:intergenic | 50.0% |
! | ACAGAGCGTTCCAACAGTTG+TGG | + | chr3_1:67212193-67212212 | None:intergenic | 50.0% |
! | GCTGTTAGTGATAGCTCTGC+TGG | + | chr3_1:67212375-67212394 | None:intergenic | 50.0% |
GACATGAGTGTGTGGGTCAT+AGG | - | chr3_1:67212453-67212472 | Msa0369870:intron | 50.0% | |
TGAGTGTGTGGGTCATAGGT+TGG | - | chr3_1:67212457-67212476 | Msa0369870:intron | 50.0% | |
GAGTGTGTGGGTCATAGGTT+GGG | - | chr3_1:67212458-67212477 | Msa0369870:intron | 50.0% | |
AACCAGGGTGTGATATGCTC+TGG | - | chr3_1:67212617-67212636 | Msa0369870:intron | 50.0% | |
TTCCAGAGCATATCACACCC+TGG | + | chr3_1:67212622-67212641 | None:intergenic | 50.0% | |
!! | GGGTGTGATATGCTCTGGAA+TGG | - | chr3_1:67212622-67212641 | Msa0369870:intron | 50.0% |
GGGGTTGTAACTAGAGAACG+TGG | - | chr3_1:67212659-67212678 | Msa0369870:intron | 50.0% | |
AATCGGAAAAGGTGAAGGCC+AGG | - | chr3_1:67212982-67213001 | Msa0369870:intron | 50.0% | |
CTCCGTGTACCGTCATGTTG+TGG | - | chr3_1:67209515-67209534 | Msa0369870:exon | 55.0% | |
GGCCACAACATGACGGTACA+CGG | + | chr3_1:67209520-67209539 | None:intergenic | 55.0% | |
CTTTCGAGCACAAGCGCGAA+AGG | + | chr3_1:67209558-67209577 | None:intergenic | 55.0% | |
CTTTCGCGCTTGTGCTCGAA+AGG | - | chr3_1:67209556-67209575 | Msa0369870:CDS | 55.0% | |
TGACTCTCCCCATCTTCCTG+AGG | - | chr3_1:67209863-67209882 | Msa0369870:intron | 55.0% | |
CCCCATCTTCCTGAGGATAG+TGG | - | chr3_1:67209870-67209889 | Msa0369870:CDS | 55.0% | |
! | GGGTCATAGGTTGGGACTCA+AGG | - | chr3_1:67212466-67212485 | Msa0369870:intron | 55.0% |
CAGCACCCGTGCAGAGAGTA+TGG | - | chr3_1:67210643-67210662 | Msa0369870:CDS | 60.0% | |
! | GTCGGATGGTTGGTCGGTTG+CGG | + | chr3_1:67211920-67211939 | None:intergenic | 60.0% |
! | GGATGGTTGGTCGGTTGCGG+CGG | + | chr3_1:67211917-67211936 | None:intergenic | 65.0% |
! | GGCGGAGGCGTGGTGGTTGA+TGG | + | chr3_1:67211899-67211918 | None:intergenic | 70.0% |
! | TGGTTGGTCGGTTGCGGCGG+AGG | + | chr3_1:67211914-67211933 | None:intergenic | 70.0% |
!! | CGGTTGCGGCGGAGGCGTGG+TGG | + | chr3_1:67211906-67211925 | None:intergenic | 80.0% |
! | GGTCGGTTGCGGCGGAGGCG+TGG | + | chr3_1:67211909-67211928 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 67209285 | 67213358 | 67209285 | ID=Msa0369870;Name=Msa0369870 |
chr3_1 | mRNA | 67209285 | 67213358 | 67209285 | ID=Msa0369870-mRNA-1;Parent=Msa0369870;Name=Msa0369870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=75|1|1|1|1|1|7|238|392 |
chr3_1 | exon | 67209285 | 67209745 | 67209285 | ID=Msa0369870-mRNA-1:exon:13834;Parent=Msa0369870-mRNA-1 |
chr3_1 | exon | 67209869 | 67210020 | 67209869 | ID=Msa0369870-mRNA-1:exon:13833;Parent=Msa0369870-mRNA-1 |
chr3_1 | exon | 67210134 | 67210292 | 67210134 | ID=Msa0369870-mRNA-1:exon:13832;Parent=Msa0369870-mRNA-1 |
chr3_1 | exon | 67210632 | 67210878 | 67210632 | ID=Msa0369870-mRNA-1:exon:13831;Parent=Msa0369870-mRNA-1 |
chr3_1 | exon | 67211315 | 67211431 | 67211315 | ID=Msa0369870-mRNA-1:exon:13830;Parent=Msa0369870-mRNA-1 |
chr3_1 | exon | 67212735 | 67212797 | 67212735 | ID=Msa0369870-mRNA-1:exon:13829;Parent=Msa0369870-mRNA-1 |
chr3_1 | exon | 67213066 | 67213358 | 67213066 | ID=Msa0369870-mRNA-1:exon:13828;Parent=Msa0369870-mRNA-1 |
chr3_1 | five_prime_UTR | 67213284 | 67213358 | 67213284 | ID=Msa0369870-mRNA-1:five_prime_utr;Parent=Msa0369870-mRNA-1 |
chr3_1 | CDS | 67213066 | 67213283 | 67213066 | ID=Msa0369870-mRNA-1:cds;Parent=Msa0369870-mRNA-1 |
chr3_1 | CDS | 67212735 | 67212797 | 67212735 | ID=Msa0369870-mRNA-1:cds;Parent=Msa0369870-mRNA-1 |
chr3_1 | CDS | 67211315 | 67211431 | 67211315 | ID=Msa0369870-mRNA-1:cds;Parent=Msa0369870-mRNA-1 |
chr3_1 | CDS | 67210632 | 67210878 | 67210632 | ID=Msa0369870-mRNA-1:cds;Parent=Msa0369870-mRNA-1 |
chr3_1 | CDS | 67210134 | 67210292 | 67210134 | ID=Msa0369870-mRNA-1:cds;Parent=Msa0369870-mRNA-1 |
chr3_1 | CDS | 67209869 | 67210020 | 67209869 | ID=Msa0369870-mRNA-1:cds;Parent=Msa0369870-mRNA-1 |
chr3_1 | CDS | 67209523 | 67209745 | 67209523 | ID=Msa0369870-mRNA-1:cds;Parent=Msa0369870-mRNA-1 |
chr3_1 | three_prime_UTR | 67209285 | 67209522 | 67209285 | ID=Msa0369870-mRNA-1:three_prime_utr;Parent=Msa0369870-mRNA-1 |
Gene Sequence |
Protein sequence |