Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0509620 | XP_003601053.1 | 96.684 | 392 | 13 | 0 | 1 | 392 | 1 | 392 | 0.0 | 783 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0509620 | sp|Q501F8|WTR32_ARATH | 63.710 | 372 | 125 | 3 | 12 | 376 | 2 | 370 | 6.43e-168 | 477 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0509620 | G7J311 | 96.684 | 392 | 13 | 0 | 1 | 392 | 1 | 392 | 0.0 | 783 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0369870 | Msa0509620 | 0.832882 | 7.333649e-56 | -8.615850e-47 |
Msa0417280 | Msa0509620 | 0.907724 | 3.719957e-81 | -8.615850e-47 |
Msa0464170 | Msa0509620 | 0.880770 | 4.174338e-70 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0509620 | MtrunA17_Chr3g0114691 | 96.684 | 392 | 13 | 0 | 1 | 392 | 1 | 392 | 0.0 | 783 |
Msa0509620 | MtrunA17_Chr1g0160171 | 77.957 | 372 | 76 | 5 | 9 | 380 | 7 | 372 | 0.0 | 597 |
Msa0509620 | MtrunA17_Chr7g0263101 | 55.385 | 325 | 136 | 3 | 20 | 340 | 13 | 332 | 7.54e-128 | 373 |
Msa0509620 | MtrunA17_Chr3g0114711 | 46.020 | 402 | 168 | 5 | 1 | 361 | 1 | 394 | 1.26e-124 | 365 |
Msa0509620 | MtrunA17_Chr1g0182291 | 51.149 | 348 | 162 | 3 | 16 | 362 | 11 | 351 | 1.53e-123 | 361 |
Msa0509620 | MtrunA17_Chr7g0255561 | 47.632 | 380 | 191 | 5 | 14 | 390 | 8 | 382 | 7.89e-123 | 360 |
Msa0509620 | MtrunA17_Chr7g0255581 | 47.632 | 380 | 191 | 5 | 14 | 390 | 8 | 382 | 7.89e-123 | 360 |
Msa0509620 | MtrunA17_Chr3g0081421 | 45.910 | 379 | 194 | 5 | 16 | 388 | 13 | 386 | 5.42e-118 | 348 |
Msa0509620 | MtrunA17_Chr3g0114731 | 46.791 | 374 | 192 | 3 | 20 | 390 | 18 | 387 | 9.75e-118 | 348 |
Msa0509620 | MtrunA17_Chr1g0160181 | 49.254 | 335 | 169 | 1 | 14 | 347 | 12 | 346 | 1.35e-113 | 337 |
Msa0509620 | MtrunA17_Chr3g0081511 | 45.989 | 374 | 193 | 5 | 20 | 390 | 17 | 384 | 1.06e-112 | 335 |
Msa0509620 | MtrunA17_Chr8g0354121 | 44.828 | 377 | 195 | 5 | 16 | 389 | 9 | 375 | 2.50e-112 | 334 |
Msa0509620 | MtrunA17_Chr3g0114701 | 40.827 | 387 | 218 | 3 | 13 | 389 | 2 | 387 | 1.17e-98 | 298 |
Msa0509620 | MtrunA17_Chr1g0186611 | 40.058 | 342 | 198 | 3 | 17 | 355 | 13 | 350 | 7.39e-87 | 267 |
Msa0509620 | MtrunA17_Chr1g0171301 | 38.968 | 349 | 196 | 4 | 17 | 356 | 13 | 353 | 1.83e-86 | 266 |
Msa0509620 | MtrunA17_Chr1g0186641 | 40.120 | 334 | 187 | 3 | 16 | 344 | 9 | 334 | 1.36e-85 | 264 |
Msa0509620 | MtrunA17_Chr1g0186601 | 38.182 | 330 | 199 | 3 | 16 | 344 | 12 | 337 | 3.59e-83 | 258 |
Msa0509620 | MtrunA17_Chr1g0186571 | 39.697 | 330 | 194 | 3 | 16 | 344 | 9 | 334 | 1.62e-82 | 256 |
Msa0509620 | MtrunA17_Chr1g0186561 | 38.905 | 347 | 202 | 3 | 17 | 362 | 13 | 350 | 3.99e-82 | 255 |
Msa0509620 | MtrunA17_Chr3g0142131 | 37.092 | 337 | 201 | 2 | 17 | 342 | 17 | 353 | 6.82e-79 | 248 |
Msa0509620 | MtrunA17_Chr1g0184221 | 35.593 | 354 | 190 | 4 | 17 | 347 | 13 | 351 | 2.07e-78 | 246 |
Msa0509620 | MtrunA17_Chr1g0155761 | 33.062 | 369 | 231 | 2 | 17 | 369 | 18 | 386 | 2.64e-75 | 239 |
Msa0509620 | MtrunA17_Chr6g0463971 | 33.429 | 347 | 226 | 3 | 15 | 357 | 11 | 356 | 8.87e-74 | 234 |
Msa0509620 | MtrunA17_Chr3g0129601 | 33.140 | 344 | 229 | 1 | 5 | 347 | 14 | 357 | 1.72e-71 | 228 |
Msa0509620 | MtrunA17_Chr2g0278561 | 35.584 | 385 | 227 | 5 | 9 | 389 | 4 | 371 | 1.90e-71 | 229 |
Msa0509620 | MtrunA17_Chr3g0129571 | 31.933 | 357 | 230 | 4 | 16 | 368 | 3 | 350 | 6.83e-70 | 224 |
Msa0509620 | MtrunA17_Chr6g0483401 | 35.474 | 327 | 203 | 2 | 29 | 350 | 19 | 342 | 9.67e-70 | 223 |
Msa0509620 | MtrunA17_Chr1g0177221 | 40.234 | 256 | 149 | 2 | 14 | 268 | 12 | 264 | 2.56e-69 | 219 |
Msa0509620 | MtrunA17_Chr4g0050881 | 34.473 | 351 | 223 | 3 | 13 | 357 | 2 | 351 | 1.57e-67 | 218 |
Msa0509620 | MtrunA17_Chr2g0278551 | 35.780 | 327 | 210 | 0 | 19 | 345 | 11 | 337 | 3.41e-67 | 218 |
Msa0509620 | MtrunA17_Chr2g0284261 | 33.242 | 364 | 228 | 5 | 20 | 376 | 8 | 363 | 1.27e-66 | 215 |
Msa0509620 | MtrunA17_Chr3g0129591 | 34.393 | 346 | 213 | 4 | 18 | 359 | 3 | 338 | 3.38e-66 | 214 |
Msa0509620 | MtrunA17_Chr8g0383731 | 33.134 | 335 | 220 | 1 | 16 | 346 | 1 | 335 | 3.18e-65 | 211 |
Msa0509620 | MtrunA17_Chr2g0310441 | 34.986 | 363 | 218 | 5 | 21 | 381 | 11 | 357 | 3.99e-65 | 212 |
Msa0509620 | MtrunA17_Chr2g0290611 | 33.233 | 331 | 221 | 0 | 15 | 345 | 7 | 337 | 1.39e-64 | 210 |
Msa0509620 | MtrunA17_Chr4g0050891 | 34.056 | 323 | 210 | 1 | 16 | 335 | 9 | 331 | 5.13e-64 | 209 |
Msa0509620 | MtrunA17_Chr2g0278541 | 35.928 | 334 | 202 | 4 | 19 | 343 | 11 | 341 | 1.64e-63 | 208 |
Msa0509620 | MtrunA17_Chr1g0164831 | 33.628 | 339 | 214 | 4 | 20 | 352 | 3 | 336 | 1.47e-62 | 204 |
Msa0509620 | MtrunA17_Chr8g0334761 | 33.956 | 321 | 209 | 2 | 21 | 340 | 11 | 329 | 3.60e-62 | 204 |
Msa0509620 | MtrunA17_Chr3g0129581 | 32.880 | 368 | 230 | 4 | 18 | 381 | 3 | 357 | 3.61e-62 | 204 |
Msa0509620 | MtrunA17_Chr7g0271561 | 34.211 | 342 | 206 | 4 | 18 | 347 | 5 | 339 | 8.56e-62 | 203 |
Msa0509620 | MtrunA17_Chr8g0334771 | 34.247 | 365 | 221 | 5 | 21 | 381 | 11 | 360 | 8.76e-62 | 203 |
Msa0509620 | MtrunA17_Chr3g0126101 | 36.482 | 307 | 184 | 4 | 44 | 347 | 30 | 328 | 1.00e-61 | 202 |
Msa0509620 | MtrunA17_Chr4g0050941 | 35.015 | 337 | 213 | 3 | 16 | 346 | 8 | 344 | 1.49e-60 | 200 |
Msa0509620 | MtrunA17_Chr4g0051021 | 32.044 | 362 | 243 | 1 | 9 | 367 | 3 | 364 | 1.84e-60 | 200 |
Msa0509620 | MtrunA17_Chr4g0059311 | 32.923 | 325 | 204 | 2 | 45 | 363 | 37 | 353 | 2.08e-58 | 194 |
Msa0509620 | MtrunA17_Chr2g0332001 | 32.448 | 339 | 224 | 4 | 19 | 356 | 37 | 371 | 1.28e-56 | 190 |
Msa0509620 | MtrunA17_Chr5g0413961 | 32.448 | 339 | 220 | 5 | 7 | 344 | 2 | 332 | 2.13e-56 | 188 |
Msa0509620 | MtrunA17_Chr5g0413941 | 35.366 | 328 | 201 | 6 | 24 | 347 | 11 | 331 | 4.49e-56 | 187 |
Msa0509620 | MtrunA17_Chr5g0408031 | 33.431 | 341 | 211 | 2 | 17 | 342 | 7 | 346 | 1.25e-55 | 187 |
Msa0509620 | MtrunA17_Chr8g0334751 | 33.956 | 321 | 209 | 2 | 21 | 340 | 12 | 330 | 1.20e-54 | 184 |
Msa0509620 | MtrunA17_Chr5g0408001 | 31.978 | 369 | 233 | 4 | 20 | 372 | 10 | 376 | 4.95e-54 | 183 |
Msa0509620 | MtrunA17_Chr5g0408041 | 33.628 | 339 | 209 | 2 | 19 | 342 | 10 | 347 | 1.74e-53 | 182 |
Msa0509620 | MtrunA17_Chr4g0073241 | 29.706 | 340 | 229 | 4 | 21 | 356 | 9 | 342 | 6.69e-53 | 180 |
Msa0509620 | MtrunA17_Chr7g0227921 | 35.644 | 303 | 189 | 4 | 46 | 346 | 37 | 335 | 2.38e-52 | 178 |
Msa0509620 | MtrunA17_Chr1g0160111 | 31.250 | 336 | 211 | 3 | 29 | 353 | 16 | 342 | 2.59e-52 | 178 |
Msa0509620 | MtrunA17_Chr5g0413921 | 32.407 | 324 | 205 | 4 | 25 | 342 | 12 | 327 | 7.20e-52 | 176 |
Msa0509620 | MtrunA17_Chr5g0407971 | 31.609 | 348 | 218 | 4 | 20 | 351 | 11 | 354 | 2.75e-51 | 176 |
Msa0509620 | MtrunA17_Chr5g0413951 | 33.667 | 300 | 195 | 3 | 44 | 342 | 31 | 327 | 5.33e-51 | 174 |
Msa0509620 | MtrunA17_Chr4g0050931 | 30.240 | 334 | 189 | 3 | 16 | 344 | 8 | 302 | 2.07e-49 | 169 |
Msa0509620 | MtrunA17_Chr5g0407991 | 31.548 | 336 | 216 | 2 | 20 | 342 | 9 | 343 | 3.33e-49 | 171 |
Msa0509620 | MtrunA17_Chr5g0413931 | 34.169 | 319 | 193 | 7 | 44 | 358 | 30 | 335 | 4.23e-49 | 169 |
Msa0509620 | MtrunA17_Chr1g0150151 | 28.205 | 351 | 243 | 3 | 17 | 365 | 8 | 351 | 4.12e-47 | 164 |
Msa0509620 | MtrunA17_Chr8g0369841 | 29.464 | 336 | 223 | 2 | 20 | 342 | 9 | 343 | 1.67e-43 | 155 |
Msa0509620 | MtrunA17_Chr5g0428881 | 27.273 | 319 | 231 | 1 | 23 | 340 | 21 | 339 | 2.65e-43 | 155 |
Msa0509620 | MtrunA17_Chr6g0451211 | 30.581 | 327 | 215 | 5 | 44 | 365 | 36 | 355 | 4.44e-40 | 146 |
Msa0509620 | MtrunA17_Chr3g0126091 | 25.145 | 346 | 253 | 3 | 18 | 359 | 9 | 352 | 5.92e-40 | 145 |
Msa0509620 | MtrunA17_Chr5g0441761 | 25.301 | 332 | 239 | 3 | 24 | 355 | 18 | 340 | 1.02e-39 | 144 |
Msa0509620 | MtrunA17_Chr4g0051001 | 27.961 | 304 | 218 | 1 | 16 | 318 | 27 | 330 | 1.86e-39 | 143 |
Msa0509620 | MtrunA17_Chr6g0451201 | 31.667 | 300 | 198 | 3 | 45 | 344 | 37 | 329 | 1.01e-38 | 142 |
Msa0509620 | MtrunA17_Chr6g0451171 | 28.902 | 346 | 237 | 5 | 21 | 364 | 13 | 351 | 1.71e-38 | 141 |
Msa0509620 | MtrunA17_Chr5g0404811 | 32.479 | 234 | 150 | 4 | 128 | 357 | 1 | 230 | 2.10e-38 | 138 |
Msa0509620 | MtrunA17_Chr1g0182261 | 45.033 | 151 | 79 | 4 | 211 | 358 | 78 | 227 | 3.48e-37 | 134 |
Msa0509620 | MtrunA17_Chr1g0182261 | 36.585 | 82 | 52 | 0 | 9 | 90 | 3 | 84 | 2.83e-13 | 68.9 |
Msa0509620 | MtrunA17_Chr6g0451251 | 31.420 | 331 | 214 | 7 | 45 | 371 | 37 | 358 | 5.53e-36 | 135 |
Msa0509620 | MtrunA17_Chr3g0084091 | 29.098 | 244 | 164 | 2 | 101 | 340 | 11 | 249 | 2.37e-35 | 131 |
Msa0509620 | MtrunA17_Chr6g0451261 | 26.087 | 345 | 241 | 4 | 17 | 350 | 8 | 349 | 6.44e-34 | 134 |
Msa0509620 | MtrunA17_Chr5g0399281 | 27.941 | 340 | 237 | 6 | 24 | 359 | 12 | 347 | 3.44e-33 | 127 |
Msa0509620 | MtrunA17_Chr1g0211801 | 28.175 | 252 | 172 | 3 | 20 | 268 | 11 | 256 | 5.60e-33 | 124 |
Msa0509620 | MtrunA17_Chr6g0451191 | 31.466 | 232 | 142 | 3 | 134 | 359 | 1 | 221 | 3.32e-32 | 121 |
Msa0509620 | MtrunA17_Chr2g0278021 | 33.790 | 219 | 136 | 3 | 134 | 345 | 1 | 217 | 6.10e-32 | 122 |
Msa0509620 | MtrunA17_Chr5g0429001 | 24.585 | 301 | 220 | 3 | 72 | 365 | 3 | 303 | 1.19e-31 | 122 |
Msa0509620 | MtrunA17_Chr4g0056081 | 27.576 | 330 | 233 | 6 | 24 | 348 | 18 | 346 | 2.20e-30 | 119 |
Msa0509620 | MtrunA17_Chr8g0334711 | 33.668 | 199 | 128 | 3 | 21 | 218 | 11 | 206 | 1.81e-27 | 108 |
Msa0509620 | MtrunA17_Chr1g0177231 | 52.128 | 94 | 43 | 1 | 266 | 359 | 26 | 117 | 1.53e-26 | 103 |
Msa0509620 | MtrunA17_Chr1g0172891 | 52.809 | 89 | 40 | 1 | 271 | 359 | 9 | 95 | 1.22e-24 | 97.4 |
Msa0509620 | MtrunA17_Chr1g0172881 | 32.099 | 162 | 96 | 3 | 108 | 268 | 1 | 149 | 2.90e-24 | 97.8 |
Msa0509620 | MtrunA17_Chr8g0334721 | 38.532 | 109 | 67 | 0 | 232 | 340 | 1 | 109 | 4.58e-21 | 89.4 |
Msa0509620 | MtrunA17_Chr8g0334731 | 31.000 | 200 | 113 | 5 | 21 | 217 | 12 | 189 | 3.00e-19 | 85.1 |
Msa0509620 | MtrunA17_Chr4g0050911 | 39.683 | 126 | 69 | 2 | 97 | 215 | 8 | 133 | 3.16e-19 | 84.3 |
Msa0509620 | MtrunA17_Chr5g0404801 | 34.483 | 116 | 76 | 0 | 18 | 133 | 5 | 120 | 5.54e-19 | 82.4 |
Msa0509620 | MtrunA17_Chr2g0278031 | 33.621 | 116 | 77 | 0 | 16 | 131 | 10 | 125 | 2.03e-16 | 75.1 |
Msa0509620 | MtrunA17_Chr4g0050921 | 33.333 | 99 | 66 | 0 | 220 | 318 | 3 | 101 | 4.28e-15 | 71.6 |
Msa0509620 | MtrunA17_Chr6g0451241 | 51.667 | 60 | 29 | 0 | 285 | 344 | 24 | 83 | 4.32e-14 | 68.2 |
Msa0509620 | MtrunA17_Chr1g0211811 | 39.437 | 71 | 43 | 0 | 273 | 343 | 4 | 74 | 9.65e-14 | 66.6 |
Msa0509620 | MtrunA17_Chr8g0372571 | 44.444 | 63 | 28 | 1 | 248 | 303 | 2 | 64 | 7.33e-12 | 60.8 |
Msa0509620 | MtrunA17_Chr4g0021721 | 55.556 | 45 | 20 | 0 | 248 | 292 | 2 | 46 | 9.11e-12 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0509620 | AT4G08300.1 | 63.710 | 372 | 125 | 3 | 12 | 376 | 2 | 370 | 6.53e-169 | 477 |
Msa0509620 | AT1G44800.1 | 61.944 | 360 | 132 | 3 | 12 | 369 | 2 | 358 | 3.87e-161 | 457 |
Msa0509620 | AT1G21890.1 | 58.290 | 386 | 147 | 4 | 15 | 392 | 5 | 384 | 1.76e-156 | 446 |
Msa0509620 | AT1G21890.2 | 62.701 | 311 | 109 | 1 | 15 | 318 | 5 | 315 | 1.23e-139 | 402 |
Msa0509620 | AT2G39510.1 | 52.368 | 359 | 163 | 4 | 16 | 368 | 3 | 359 | 1.40e-122 | 359 |
Msa0509620 | AT2G37460.1 | 48.108 | 370 | 185 | 5 | 16 | 383 | 10 | 374 | 6.60e-122 | 358 |
Msa0509620 | AT4G08290.1 | 45.179 | 363 | 199 | 0 | 14 | 376 | 6 | 368 | 7.87e-122 | 358 |
Msa0509620 | AT5G07050.1 | 44.416 | 385 | 196 | 3 | 14 | 392 | 11 | 383 | 2.54e-112 | 334 |
Msa0509620 | AT5G13670.1 | 46.809 | 329 | 170 | 4 | 16 | 341 | 3 | 329 | 5.72e-102 | 307 |
Msa0509620 | AT2G40900.1 | 43.976 | 332 | 173 | 3 | 20 | 345 | 10 | 334 | 1.48e-100 | 304 |
Msa0509620 | AT3G56620.1 | 44.654 | 318 | 170 | 1 | 20 | 337 | 10 | 321 | 1.11e-99 | 301 |
Msa0509620 | AT2G37450.2 | 47.879 | 330 | 142 | 5 | 14 | 340 | 2 | 304 | 3.60e-95 | 288 |
Msa0509620 | AT4G08290.2 | 46.275 | 255 | 137 | 0 | 14 | 268 | 6 | 260 | 5.60e-84 | 258 |
Msa0509620 | AT3G18200.2 | 36.628 | 344 | 214 | 2 | 4 | 347 | 18 | 357 | 4.51e-79 | 248 |
Msa0509620 | AT1G75500.1 | 35.526 | 380 | 225 | 9 | 1 | 365 | 1 | 375 | 2.01e-78 | 247 |
Msa0509620 | AT1G75500.2 | 35.526 | 380 | 225 | 9 | 1 | 365 | 1 | 375 | 2.01e-78 | 247 |
Msa0509620 | AT3G53210.1 | 37.309 | 327 | 202 | 2 | 17 | 342 | 6 | 330 | 2.63e-74 | 236 |
Msa0509620 | AT2G37450.3 | 52.941 | 238 | 103 | 4 | 106 | 340 | 1 | 232 | 1.08e-73 | 231 |
Msa0509620 | AT4G30420.2 | 32.070 | 343 | 228 | 2 | 16 | 355 | 4 | 344 | 3.08e-66 | 215 |
Msa0509620 | AT5G64700.1 | 33.807 | 352 | 210 | 3 | 20 | 361 | 7 | 345 | 8.61e-65 | 211 |
Msa0509620 | AT4G30420.1 | 32.143 | 336 | 223 | 2 | 23 | 355 | 1 | 334 | 1.68e-64 | 211 |
Msa0509620 | AT3G30340.1 | 34.983 | 303 | 196 | 1 | 45 | 347 | 35 | 336 | 2.51e-63 | 207 |
Msa0509620 | AT1G09380.1 | 34.048 | 373 | 233 | 4 | 21 | 389 | 8 | 371 | 5.49e-63 | 206 |
Msa0509620 | AT1G43650.1 | 34.018 | 341 | 212 | 3 | 20 | 357 | 6 | 336 | 6.01e-62 | 203 |
Msa0509620 | AT2G37450.1 | 45.221 | 272 | 129 | 9 | 78 | 340 | 5 | 265 | 7.05e-61 | 199 |
Msa0509620 | AT3G53210.2 | 40.081 | 247 | 145 | 2 | 97 | 342 | 29 | 273 | 2.55e-58 | 192 |
Msa0509620 | AT4G28040.1 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 4.04e-54 | 183 |
Msa0509620 | AT4G28040.5 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 4.04e-54 | 183 |
Msa0509620 | AT4G28040.3 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 4.04e-54 | 183 |
Msa0509620 | AT4G28040.4 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 4.04e-54 | 183 |
Msa0509620 | AT4G28040.2 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 4.04e-54 | 183 |
Msa0509620 | AT3G53210.3 | 35.798 | 257 | 162 | 2 | 17 | 272 | 6 | 260 | 4.80e-54 | 180 |
Msa0509620 | AT1G25270.1 | 31.507 | 365 | 225 | 4 | 19 | 369 | 1 | 354 | 2.73e-53 | 181 |
Msa0509620 | AT3G18200.1 | 39.301 | 229 | 135 | 2 | 119 | 347 | 3 | 227 | 3.03e-53 | 177 |
Msa0509620 | AT4G01440.1 | 29.703 | 303 | 209 | 2 | 46 | 347 | 35 | 334 | 2.70e-51 | 176 |
Msa0509620 | AT5G40240.1 | 29.859 | 355 | 239 | 5 | 17 | 367 | 16 | 364 | 4.52e-51 | 175 |
Msa0509620 | AT5G40240.3 | 29.859 | 355 | 239 | 5 | 17 | 367 | 16 | 364 | 4.52e-51 | 175 |
Msa0509620 | AT5G40240.2 | 29.859 | 355 | 239 | 5 | 17 | 367 | 30 | 378 | 5.18e-51 | 176 |
Msa0509620 | AT1G01070.1 | 33.333 | 330 | 203 | 7 | 46 | 365 | 41 | 363 | 1.08e-50 | 174 |
Msa0509620 | AT1G68170.2 | 30.199 | 351 | 236 | 2 | 17 | 358 | 9 | 359 | 7.75e-48 | 167 |
Msa0509620 | AT4G01430.1 | 30.592 | 304 | 209 | 2 | 46 | 347 | 34 | 337 | 5.34e-47 | 164 |
Msa0509620 | AT1G68170.1 | 30.086 | 349 | 235 | 2 | 19 | 358 | 1 | 349 | 7.23e-47 | 164 |
Msa0509620 | AT5G40230.1 | 28.736 | 348 | 232 | 6 | 17 | 357 | 17 | 355 | 1.10e-46 | 164 |
Msa0509620 | AT3G28050.1 | 30.904 | 343 | 226 | 6 | 17 | 355 | 8 | 343 | 1.21e-44 | 158 |
Msa0509620 | AT4G01440.3 | 29.927 | 274 | 188 | 2 | 46 | 318 | 35 | 305 | 1.97e-44 | 156 |
Msa0509620 | AT5G45370.2 | 30.488 | 328 | 210 | 4 | 34 | 346 | 33 | 357 | 2.51e-44 | 158 |
Msa0509620 | AT5G45370.4 | 30.488 | 328 | 210 | 4 | 34 | 346 | 33 | 357 | 2.51e-44 | 158 |
Msa0509620 | AT5G45370.1 | 31.310 | 313 | 203 | 3 | 34 | 346 | 33 | 333 | 6.16e-44 | 156 |
Msa0509620 | AT1G11450.3 | 30.380 | 316 | 209 | 4 | 46 | 356 | 41 | 350 | 9.03e-43 | 153 |
Msa0509620 | AT1G01070.2 | 32.686 | 309 | 191 | 7 | 67 | 365 | 15 | 316 | 1.12e-42 | 152 |
Msa0509620 | AT3G45870.1 | 30.769 | 325 | 215 | 2 | 20 | 335 | 11 | 334 | 6.69e-42 | 151 |
Msa0509620 | AT5G40210.1 | 28.902 | 346 | 220 | 7 | 24 | 365 | 16 | 339 | 1.14e-41 | 150 |
Msa0509620 | AT1G11450.5 | 30.225 | 311 | 206 | 4 | 51 | 356 | 2 | 306 | 4.58e-41 | 147 |
Msa0509620 | AT1G70260.1 | 26.866 | 335 | 239 | 2 | 18 | 346 | 9 | 343 | 5.43e-41 | 149 |
Msa0509620 | AT1G11460.1 | 30.897 | 301 | 195 | 5 | 46 | 340 | 41 | 334 | 1.65e-40 | 147 |
Msa0509620 | AT3G28070.2 | 30.000 | 260 | 178 | 3 | 104 | 361 | 8 | 265 | 4.39e-40 | 144 |
Msa0509620 | AT3G28100.1 | 29.412 | 289 | 198 | 4 | 72 | 359 | 66 | 349 | 8.67e-40 | 145 |
Msa0509620 | AT5G64700.2 | 32.171 | 258 | 160 | 2 | 20 | 267 | 7 | 259 | 2.57e-39 | 141 |
Msa0509620 | AT3G28070.1 | 30.249 | 281 | 191 | 4 | 83 | 361 | 80 | 357 | 2.66e-39 | 144 |
Msa0509620 | AT3G30340.2 | 33.929 | 224 | 147 | 1 | 45 | 268 | 35 | 257 | 3.49e-39 | 141 |
Msa0509620 | AT3G28080.1 | 28.328 | 293 | 196 | 5 | 72 | 359 | 66 | 349 | 3.90e-39 | 143 |
Msa0509620 | AT3G28080.5 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 4.02e-39 | 141 |
Msa0509620 | AT3G28080.7 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 4.02e-39 | 141 |
Msa0509620 | AT3G28080.8 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 4.02e-39 | 141 |
Msa0509620 | AT3G28080.6 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 4.02e-39 | 141 |
Msa0509620 | AT1G11450.2 | 30.033 | 303 | 201 | 4 | 59 | 356 | 3 | 299 | 4.48e-39 | 142 |
Msa0509620 | AT3G28130.5 | 32.917 | 240 | 159 | 2 | 104 | 342 | 10 | 248 | 9.28e-39 | 140 |
Msa0509620 | AT3G28130.1 | 32.917 | 240 | 159 | 2 | 104 | 342 | 10 | 248 | 9.28e-39 | 140 |
Msa0509620 | AT4G19185.1 | 28.534 | 382 | 251 | 5 | 22 | 386 | 22 | 398 | 9.38e-39 | 143 |
Msa0509620 | AT4G15540.1 | 28.280 | 343 | 230 | 4 | 17 | 358 | 13 | 340 | 1.69e-38 | 141 |
Msa0509620 | AT4G15540.2 | 28.280 | 343 | 230 | 4 | 17 | 358 | 13 | 340 | 1.69e-38 | 141 |
Msa0509620 | AT3G28080.2 | 29.183 | 257 | 177 | 3 | 104 | 359 | 89 | 341 | 4.66e-38 | 140 |
Msa0509620 | AT3G28130.2 | 32.645 | 242 | 161 | 2 | 104 | 344 | 96 | 336 | 9.13e-38 | 140 |
Msa0509620 | AT4G01430.2 | 30.249 | 281 | 194 | 2 | 46 | 324 | 34 | 314 | 1.14e-37 | 139 |
Msa0509620 | AT1G43650.2 | 34.263 | 251 | 154 | 2 | 20 | 267 | 6 | 248 | 3.14e-37 | 136 |
Msa0509620 | AT5G47470.3 | 28.659 | 328 | 219 | 5 | 28 | 350 | 65 | 382 | 4.30e-37 | 139 |
Msa0509620 | AT5G47470.2 | 29.245 | 318 | 210 | 5 | 28 | 340 | 65 | 372 | 4.63e-37 | 139 |
Msa0509620 | AT5G47470.1 | 29.217 | 332 | 217 | 6 | 28 | 354 | 37 | 355 | 5.24e-37 | 138 |
Msa0509620 | AT4G24980.1 | 32.673 | 303 | 136 | 6 | 35 | 337 | 1 | 235 | 9.20e-37 | 135 |
Msa0509620 | AT4G01440.5 | 29.515 | 227 | 156 | 2 | 122 | 347 | 3 | 226 | 3.63e-35 | 130 |
Msa0509620 | AT4G01440.2 | 29.515 | 227 | 156 | 2 | 122 | 347 | 3 | 226 | 3.63e-35 | 130 |
Msa0509620 | AT3G45870.8 | 29.545 | 308 | 207 | 2 | 20 | 318 | 11 | 317 | 3.74e-35 | 132 |
Msa0509620 | AT4G01440.4 | 30.172 | 232 | 142 | 4 | 46 | 268 | 35 | 255 | 2.61e-34 | 128 |
Msa0509620 | AT4G19185.2 | 28.758 | 306 | 196 | 5 | 98 | 386 | 20 | 320 | 1.37e-32 | 125 |
Msa0509620 | AT1G11450.4 | 29.964 | 277 | 184 | 3 | 46 | 318 | 41 | 311 | 4.76e-32 | 123 |
Msa0509620 | AT1G11450.1 | 29.658 | 263 | 174 | 4 | 99 | 356 | 2 | 258 | 6.46e-32 | 122 |
Msa0509620 | AT5G45370.6 | 30.620 | 258 | 161 | 4 | 104 | 346 | 1 | 255 | 2.64e-31 | 120 |
Msa0509620 | AT5G45370.5 | 30.620 | 258 | 161 | 4 | 104 | 346 | 1 | 255 | 2.64e-31 | 120 |
Msa0509620 | AT1G60050.1 | 23.546 | 361 | 261 | 5 | 17 | 362 | 9 | 369 | 6.14e-31 | 122 |
Msa0509620 | AT4G01450.2 | 28.763 | 299 | 205 | 2 | 46 | 343 | 35 | 326 | 1.61e-30 | 120 |
Msa0509620 | AT3G28070.3 | 29.787 | 235 | 160 | 4 | 86 | 318 | 83 | 314 | 1.16e-29 | 117 |
Msa0509620 | AT3G28070.5 | 27.391 | 230 | 163 | 3 | 134 | 361 | 1 | 228 | 5.33e-29 | 113 |
Msa0509620 | AT4G16620.1 | 26.727 | 333 | 235 | 4 | 29 | 357 | 20 | 347 | 5.53e-29 | 116 |
Msa0509620 | AT4G01450.1 | 27.372 | 274 | 191 | 2 | 46 | 318 | 35 | 301 | 6.65e-29 | 115 |
Msa0509620 | AT3G45870.9 | 29.658 | 263 | 173 | 3 | 20 | 273 | 11 | 270 | 1.03e-28 | 113 |
Msa0509620 | AT3G28080.9 | 26.872 | 227 | 161 | 3 | 134 | 359 | 1 | 223 | 2.09e-28 | 111 |
Msa0509620 | AT3G28130.3 | 30.476 | 210 | 144 | 2 | 134 | 342 | 1 | 209 | 7.61e-28 | 110 |
Msa0509620 | AT4G01450.4 | 27.830 | 212 | 145 | 2 | 46 | 256 | 35 | 239 | 1.50e-25 | 104 |
Msa0509620 | AT3G28080.3 | 25.000 | 292 | 153 | 6 | 72 | 359 | 66 | 295 | 9.83e-25 | 103 |
Msa0509620 | AT5G45370.3 | 27.986 | 293 | 184 | 7 | 72 | 346 | 14 | 297 | 1.69e-24 | 103 |
Msa0509620 | AT3G45870.5 | 32.075 | 212 | 134 | 2 | 133 | 335 | 49 | 259 | 1.74e-24 | 102 |
Msa0509620 | AT3G28080.4 | 25.391 | 256 | 134 | 4 | 104 | 359 | 8 | 206 | 1.78e-24 | 100 |
Msa0509620 | AT3G28100.3 | 31.633 | 196 | 132 | 2 | 72 | 266 | 66 | 260 | 1.14e-22 | 96.7 |
Msa0509620 | AT4G01450.3 | 28.125 | 192 | 130 | 2 | 46 | 236 | 35 | 219 | 7.04e-22 | 94.0 |
Msa0509620 | AT4G01430.3 | 26.000 | 200 | 147 | 1 | 149 | 347 | 1 | 200 | 7.58e-22 | 93.6 |
Msa0509620 | AT4G16620.4 | 27.843 | 255 | 176 | 3 | 106 | 357 | 1 | 250 | 2.01e-21 | 93.2 |
Msa0509620 | AT4G16620.2 | 27.843 | 255 | 176 | 3 | 106 | 357 | 1 | 250 | 2.01e-21 | 93.2 |
Msa0509620 | AT3G28130.4 | 32.143 | 168 | 112 | 2 | 104 | 270 | 96 | 262 | 1.73e-19 | 87.8 |
Msa0509620 | AT3G45870.2 | 33.803 | 142 | 93 | 1 | 194 | 335 | 43 | 183 | 3.33e-18 | 83.6 |
Msa0509620 | AT3G45870.6 | 30.256 | 195 | 126 | 2 | 133 | 318 | 49 | 242 | 5.10e-18 | 83.2 |
Msa0509620 | AT3G45870.7 | 30.256 | 195 | 126 | 2 | 133 | 318 | 49 | 242 | 5.10e-18 | 83.2 |
Msa0509620 | AT4G16620.3 | 26.316 | 209 | 149 | 2 | 29 | 236 | 20 | 224 | 2.21e-17 | 82.0 |
Msa0509620 | AT3G28100.2 | 32.716 | 162 | 108 | 1 | 74 | 235 | 68 | 228 | 4.80e-17 | 80.5 |
Msa0509620 | AT3G28130.6 | 46.875 | 64 | 34 | 0 | 104 | 167 | 96 | 159 | 1.22e-12 | 67.0 |
Msa0509620 | AT3G45870.4 | 30.405 | 148 | 91 | 3 | 135 | 273 | 4 | 148 | 1.25e-11 | 62.8 |
Msa0509620 | AT3G45870.3 | 30.128 | 156 | 97 | 3 | 127 | 273 | 43 | 195 | 1.89e-11 | 63.5 |
Find 111 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAACCATCTGACCAAAAT+TGG | 0.153454 | 3_4:-58078066 | Msa0509620:CDS |
GGAACGGTTGTAACCGTTTC+AGG | 0.162387 | 3_4:-58078178 | Msa0509620:CDS |
TTATAATGGCTCTCACTTTC+AGG | 0.165762 | 3_4:-58078686 | Msa0509620:intron |
TCAACTTACCATTAGCATTT+TGG | 0.208587 | 3_4:+58080628 | None:intergenic |
CACAGCGTAGCCAAAGTAAT+TGG | 0.236548 | 3_4:-58078199 | Msa0509620:CDS |
GGAGCTATTATCATTGTTAT+TGG | 0.245307 | 3_4:-58077155 | Msa0509620:CDS |
GCTATATTGTCCCTTCAATT+TGG | 0.246893 | 3_4:-58080567 | Msa0509620:CDS |
CTGTGCCCATCACCCAATTT+TGG | 0.276542 | 3_4:+58078053 | None:intergenic |
CTCTTGGTCTATGGAAGCAC+TGG | 0.303108 | 3_4:+58080663 | None:intergenic |
CCCTGCCTATCAAATCATAA+AGG | 0.351442 | 3_4:-58078128 | Msa0509620:CDS |
ATCAAGAATGGTACAAAATC+AGG | 0.362733 | 3_4:-58077044 | Msa0509620:CDS |
GGCGGAGGCGTGGTGGTTGA+TGG | 0.372027 | 3_4:+58078096 | None:intergenic |
TTGGTCTTTACACTGTGGTA+TGG | 0.380721 | 3_4:-58077136 | Msa0509620:CDS |
TGGTCTTTACACTGTGGTAT+GGG | 0.382522 | 3_4:-58077135 | Msa0509620:CDS |
TCTTGATTGGCAATTGATCC+TGG | 0.385333 | 3_4:+58077060 | None:intergenic |
GTCCCTTCAATTTGGTTACT+CGG | 0.389202 | 3_4:-58080559 | Msa0509620:CDS |
CCCTTTATGATTTGATAGGC+AGG | 0.393432 | 3_4:+58078127 | None:intergenic |
TGGTTGCTCGGTTGCGGCGG+AGG | 0.396032 | 3_4:+58078081 | None:intergenic |
TGCTTGATGGGTATTATTGA+GGG | 0.399691 | 3_4:-58077663 | Msa0509620:CDS |
TATATCAAGTTGTTGTAGTT+GGG | 0.408362 | 3_4:-58078023 | Msa0509620:CDS |
GGGGATGTACATCATTACTA+TGG | 0.409950 | 3_4:-58080538 | Msa0509620:CDS |
TTGCTTGATGGGTATTATTG+AGG | 0.412527 | 3_4:-58077664 | Msa0509620:CDS |
TTATATCAAGTTGTTGTAGT+TGG | 0.418246 | 3_4:-58078024 | Msa0509620:CDS |
TCCCTTCAATTTGGTTACTC+GGG | 0.419264 | 3_4:-58080558 | Msa0509620:CDS |
GTCAGATGGTTGCTCGGTTG+CGG | 0.424987 | 3_4:+58078075 | None:intergenic |
CCTGCCTATCAAATCATAAA+GGG | 0.428868 | 3_4:-58078127 | Msa0509620:CDS |
TTATGTGAATTGTGAGTTTG+TGG | 0.433308 | 3_4:+58080725 | None:intergenic |
TACAACCGTTCCAATTACTT+TGG | 0.433847 | 3_4:+58078189 | None:intergenic |
GACAGCATGGATTTGCTTGA+TGG | 0.437922 | 3_4:-58077676 | Msa0509620:CDS |
CTTCATCATCATGCTTATGT+TGG | 0.457098 | 3_4:+58076948 | None:intergenic |
ATGGAGGACCAAAATGCTAA+TGG | 0.457402 | 3_4:-58080636 | Msa0509620:CDS |
CCCCATCTTCCTGAGGATAG+TGG | 0.460250 | 3_4:-58080122 | Msa0509620:CDS |
TTAGCTGAACAAGTTCATCT+TGG | 0.461729 | 3_4:-58077314 | Msa0509620:CDS |
AAGCACACACACAAAACTAT+AGG | 0.466762 | 3_4:+58080702 | None:intergenic |
TCAAGTTGTTGTAGTTGGGC+TGG | 0.467278 | 3_4:-58078019 | Msa0509620:CDS |
GCCACTATCCTCAGGAAGAT+GGG | 0.467307 | 3_4:+58080121 | None:intergenic |
TCAAACATGGTATGAGCCAT+TGG | 0.469056 | 3_4:-58080509 | Msa0509620:CDS |
GCCATTATAAAAGTAATAGC+TGG | 0.469113 | 3_4:+58078699 | None:intergenic |
TTTCATAACCTCTAGCAGAT+AGG | 0.473104 | 3_4:+58076887 | None:intergenic |
TGCCACTATCCTCAGGAAGA+TGG | 0.473679 | 3_4:+58080120 | None:intergenic |
GCAACCATCTGACCAAAATT+GGG | 0.481594 | 3_4:-58078065 | Msa0509620:CDS |
AAGATGGGGAGAGTCATCTT+TGG | 0.484154 | 3_4:+58080136 | None:intergenic |
GGGTCATAGGTTGGGACTCA+AGG | 0.484228 | 3_4:-58077599 | Msa0509620:CDS |
ATGATTATCACTGCTGCATT+GGG | 0.487028 | 3_4:-58077347 | Msa0509620:CDS |
GCTGTCAGTGATAGCTCTGC+TGG | 0.493389 | 3_4:+58077693 | None:intergenic |
TCAGGTTAGAGTCAGTGAAC+TGG | 0.496846 | 3_4:-58078231 | Msa0509620:intron |
AACCAGGGTGTGATATGCTC+TGG | 0.500988 | 3_4:-58077446 | Msa0509620:intron |
GCTCGGTTGCGGCGGAGGCG+TGG | 0.507173 | 3_4:+58078086 | None:intergenic |
GACACATCAGAGATGGGAAA+AGG | 0.508088 | 3_4:-58077089 | Msa0509620:CDS |
AGAAATCAAAAGTATTAGAA+AGG | 0.508788 | 3_4:+58076721 | None:intergenic |
GATGGGAAAAGGTGAAGGCC+AGG | 0.510420 | 3_4:-58077078 | Msa0509620:CDS |
TTCCTGAGGATAGTGGCACT+TGG | 0.515982 | 3_4:-58080115 | Msa0509620:CDS |
CTGAACAAGTTCATCTTGGA+AGG | 0.517537 | 3_4:-58077310 | Msa0509620:intron |
GATCAATTGCCAATCAAGAA+TGG | 0.518861 | 3_4:-58077056 | Msa0509620:CDS |
TTTCAATTTACCTTCCTAAG+TGG | 0.520067 | 3_4:-58076840 | Msa0509620:three_prime_UTR |
CTTTCGCGCTTGTGCTCGAA+AGG | 0.520412 | 3_4:-58080440 | Msa0509620:intron |
TGTAACCGTTTCAGGAGCTA+TGG | 0.524366 | 3_4:-58078170 | Msa0509620:CDS |
TCCCCGAGTAACCAAATTGA+AGG | 0.524768 | 3_4:+58080556 | None:intergenic |
ATCTGACCAAAATTGGGTGA+TGG | 0.525209 | 3_4:-58078059 | Msa0509620:CDS |
CCTTTATGATTTGATAGGCA+GGG | 0.526071 | 3_4:+58078128 | None:intergenic |
TATGATTATCACTGCTGCAT+TGG | 0.533858 | 3_4:-58077348 | Msa0509620:CDS |
GACATGAGTGTGTGGGTCAT+AGG | 0.533991 | 3_4:-58077612 | Msa0509620:CDS |
TCGTGAAGACACATCAGAGA+TGG | 0.540428 | 3_4:-58077096 | Msa0509620:CDS |
TCTGACCAAAATTGGGTGAT+GGG | 0.541178 | 3_4:-58078058 | Msa0509620:CDS |
CTTTCGAGCACAAGCGCGAA+AGG | 0.544006 | 3_4:+58080441 | None:intergenic |
CATAACCATAGCTCCTGAAA+CGG | 0.545710 | 3_4:+58078165 | None:intergenic |
TATGTGAATTGTGAGTTTGT+GGG | 0.548106 | 3_4:+58080726 | None:intergenic |
GGAATGGCATATTATGTACA+AGG | 0.549854 | 3_4:-58077425 | Msa0509620:CDS |
GAGTGTGTGGGTCATAGGTT+GGG | 0.550997 | 3_4:-58077607 | Msa0509620:CDS |
AGGGACAATATAGCAAGGTA+TGG | 0.553205 | 3_4:+58080576 | None:intergenic |
CAGAGCTATCACTGACAGCA+TGG | 0.555199 | 3_4:-58077689 | Msa0509620:CDS |
AACCAAGTGCCACTATCCTC+AGG | 0.556943 | 3_4:+58080113 | None:intergenic |
AAAAGTAAAACCACTTAGGA+AGG | 0.557872 | 3_4:+58076830 | None:intergenic |
TCTTGGTCTATGGAAGCACT+GGG | 0.562257 | 3_4:+58080664 | None:intergenic |
CCCTTCAATTTGGTTACTCG+GGG | 0.562657 | 3_4:-58080557 | Msa0509620:CDS |
TGAGTGTGTGGGTCATAGGT+TGG | 0.566678 | 3_4:-58077608 | Msa0509620:CDS |
CGTGAAGACACATCAGAGAT+GGG | 0.573992 | 3_4:-58077095 | Msa0509620:CDS |
CTCCGTGTACCGTCATGTTG+TGG | 0.575393 | 3_4:-58080481 | Msa0509620:CDS |
AGATCAAAACTTGTACAACA+TGG | 0.579557 | 3_4:-58078772 | Msa0509620:CDS |
AGATGGTTGCTCGGTTGCGG+CGG | 0.579960 | 3_4:+58078078 | None:intergenic |
AAATAAAAGTAAAACCACTT+AGG | 0.583365 | 3_4:+58076826 | None:intergenic |
CGGTTGCGGCGGAGGCGTGG+TGG | 0.587210 | 3_4:+58078089 | None:intergenic |
GCTAATGGTAAGTTGAACAA+TGG | 0.587597 | 3_4:-58080621 | Msa0509620:CDS |
GGTCTTTACACTGTGGTATG+GGG | 0.595316 | 3_4:-58077134 | Msa0509620:CDS |
ACTATGGTTTCTTTCAAACA+TGG | 0.599226 | 3_4:-58080522 | Msa0509620:CDS |
GCAGTGATAATCATACATAG+TGG | 0.600906 | 3_4:+58077356 | None:intergenic |
GGCCACAACATGACGGTACA+CGG | 0.607059 | 3_4:+58080479 | None:intergenic |
TCAGAGATGGGAAAAGGTGA+AGG | 0.611578 | 3_4:-58077083 | Msa0509620:CDS |
ACAGCATGGATTTGCTTGAT+GGG | 0.612237 | 3_4:-58077675 | Msa0509620:CDS |
GATCAAAACTTGTACAACAT+GGG | 0.613658 | 3_4:-58078771 | Msa0509620:CDS |
TGCCTATCAAATCATAAAGG+GGG | 0.626849 | 3_4:-58078125 | Msa0509620:CDS |
TGTTATTGGTCTTTACACTG+TGG | 0.629869 | 3_4:-58077141 | Msa0509620:CDS |
TTATAAAAGTAATAGCTGGA+AGG | 0.634915 | 3_4:+58078703 | None:intergenic |
CCACTATCCTCAGGAAGATG+GGG | 0.640156 | 3_4:+58080122 | None:intergenic |
GAAAGGAGTAATTATAATTG+CGG | 0.640420 | 3_4:+58080458 | None:intergenic |
GGGTGTGATATGCTCTGGAA+TGG | 0.640880 | 3_4:-58077441 | Msa0509620:CDS |
CTGCCTATCAAATCATAAAG+GGG | 0.644691 | 3_4:-58078126 | Msa0509620:CDS |
CCCCGAGTAACCAAATTGAA+GGG | 0.651140 | 3_4:+58080557 | None:intergenic |
GCCTATCAAATCATAAAGGG+GGG | 0.651579 | 3_4:-58078124 | Msa0509620:CDS |
TTGAAAGAGACATGAGTGTG+TGG | 0.655962 | 3_4:-58077620 | Msa0509620:CDS |
ATTGAAGGGACAATATAGCA+AGG | 0.656111 | 3_4:+58080571 | None:intergenic |
GAATGGCATATTATGTACAA+GGG | 0.658299 | 3_4:-58077424 | Msa0509620:CDS |
ATGGTTATGACTTTGTACAA+AGG | 0.661239 | 3_4:-58078151 | Msa0509620:CDS |
TAATTGCGGCCACAACATGA+CGG | 0.665558 | 3_4:+58080472 | None:intergenic |
TGACTCTCCCCATCTTCCTG+AGG | 0.673443 | 3_4:-58080129 | Msa0509620:CDS |
CGTAGCCAAAGTAATTGGAA+CGG | 0.674504 | 3_4:-58078194 | Msa0509620:CDS |
AATGGCATATTATGTACAAG+GGG | 0.679044 | 3_4:-58077423 | Msa0509620:CDS |
TGAAAGAGACATGAGTGTGT+GGG | 0.686987 | 3_4:-58077619 | Msa0509620:CDS |
AGCTGGAAGGACATTAACAG+TGG | 0.704261 | 3_4:+58078716 | None:intergenic |
GGGGTTGTAACTAGAGAACG+TGG | 0.715948 | 3_4:-58077404 | Msa0509620:CDS |
GGTACACGGAGAGAATCCAA+TGG | 0.752925 | 3_4:+58080493 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTACTATTTATTTAGTAAA+AGG | - | chr3_4:58078476-58078495 | Msa0509620:intron | 10.0% |
!! | TATTATAAAAAAAGATTCAT+TGG | + | chr3_4:58079138-58079157 | None:intergenic | 10.0% |
!! | CTCTAATTTAATTAAAATAT+TGG | - | chr3_4:58080220-58080239 | Msa0509620:intron | 10.0% |
!! | TTTATATTTACAGAAAAACA+AGG | - | chr3_4:58077288-58077307 | Msa0509620:intron | 15.0% |
!!! | AAGAAAGATTATGAATTTTA+TGG | + | chr3_4:58077564-58077583 | None:intergenic | 15.0% |
!! | ATAAAATTCATAATCTTTCT+TGG | - | chr3_4:58077563-58077582 | Msa0509620:intron | 15.0% |
!!! | AAAGAAGATTTAACATTTTT+CGG | - | chr3_4:58077755-58077774 | Msa0509620:intron | 15.0% |
!!! | ATAGTTTAAACATTTTTCTA+TGG | - | chr3_4:58078534-58078553 | Msa0509620:intron | 15.0% |
!!! | TGTTTTTTGTTTTTTTTTTC+CGG | - | chr3_4:58078565-58078584 | Msa0509620:intron | 15.0% |
!! | ATAAAAGATTAGAAAATTAG+AGG | + | chr3_4:58079083-58079102 | None:intergenic | 15.0% |
!!! | TATTGTTTTACTAATTAATC+AGG | - | chr3_4:58079198-58079217 | Msa0509620:intron | 15.0% |
!!! | ATAAAATAGATTATTTTGCA+CGG | - | chr3_4:58079515-58079534 | Msa0509620:intron | 15.0% |
!! | TTTATGATAATTATATAACC+AGG | - | chr3_4:58079985-58080004 | Msa0509620:intron | 15.0% |
!! | TTATGATAATTATATAACCA+GGG | - | chr3_4:58079986-58080005 | Msa0509620:intron | 15.0% |
!! | TTATTGATAGAGATTAGAAA+CGG | - | chr3_4:58077084-58077103 | Msa0509620:CDS | 20.0% |
!!! | TTTTTTTAAAACCTTTTGCT+TGG | - | chr3_4:58077665-58077684 | Msa0509620:CDS | 20.0% |
!!! | ACCTCTAAAAAAACATTTTT+CGG | - | chr3_4:58077783-58077802 | Msa0509620:intron | 20.0% |
!!! | AGTTTTTTGTACCAAAAAAA+AGG | + | chr3_4:58077843-58077862 | None:intergenic | 20.0% |
!!! | TTTTTTTTGGTACAAAAAAC+TGG | - | chr3_4:58077842-58077861 | Msa0509620:intron | 20.0% |
!!! | ATTCATTTCTATTTGCTTTT+AGG | + | chr3_4:58077884-58077903 | None:intergenic | 20.0% |
!! | TCATTTCTTAGGATAATATA+TGG | - | chr3_4:58078023-58078042 | Msa0509620:CDS | 20.0% |
!! | ATATATGAATTGAAGTGATT+AGG | + | chr3_4:58078313-58078332 | None:intergenic | 20.0% |
!!! | TAATATATAAATTGACTCGA+TGG | + | chr3_4:58078346-58078365 | None:intergenic | 20.0% |
!!! | GATGTGATAATATAATTTTC+TGG | - | chr3_4:58078385-58078404 | Msa0509620:intron | 20.0% |
!! | AAATTGTTCCTATAATTCAT+GGG | + | chr3_4:58078457-58078476 | None:intergenic | 20.0% |
!! | AAAATTGTTCCTATAATTCA+TGG | + | chr3_4:58078458-58078477 | None:intergenic | 20.0% |
!!! | AGTTTTTGTTTTTGTTTTCA+TGG | + | chr3_4:58078807-58078826 | None:intergenic | 20.0% |
!! | AGAATATATATGTTGATGTT+TGG | + | chr3_4:58079488-58079507 | None:intergenic | 20.0% |
!!! | AAAGATTTTTTTCCCTATAA+CGG | - | chr3_4:58079580-58079599 | Msa0509620:intron | 20.0% |
!! | TTCACTAAGTAAATAAATAG+AGG | + | chr3_4:58079904-58079923 | None:intergenic | 20.0% |
!! | CCAAATATACTATAAAATGA+AGG | + | chr3_4:58080274-58080293 | None:intergenic | 20.0% |
!!! | CCTTCATTTTATAGTATATT+TGG | - | chr3_4:58080271-58080290 | Msa0509620:intron | 20.0% |
!! | AAATAAAAGTAAAACCACTT+AGG | + | chr3_4:58080624-58080643 | None:intergenic | 20.0% |
! | GAAAGGAGTAATTATAATTG+CGG | + | chr3_4:58076992-58077011 | None:intergenic | 25.0% |
! | AATTCATAATCTTTCTTGGT+TGG | - | chr3_4:58077567-58077586 | Msa0509620:intron | 25.0% |
! | ATTCATAATCTTTCTTGGTT+GGG | - | chr3_4:58077568-58077587 | Msa0509620:intron | 25.0% |
! | AGGAAATCAAAAAGATTCAT+AGG | - | chr3_4:58077594-58077613 | Msa0509620:CDS | 25.0% |
!!! | ACCGAAAAATGTTTTTTTAG+AGG | + | chr3_4:58077787-58077806 | None:intergenic | 25.0% |
!!! | TAGAACCTTTACCTTTTTTT+TGG | - | chr3_4:58077829-58077848 | Msa0509620:intron | 25.0% |
! | TTGTACCAAAAAAAAGGTAA+AGG | + | chr3_4:58077837-58077856 | None:intergenic | 25.0% |
! | AAGAAATGAAATCACACAAT+GGG | + | chr3_4:58078012-58078031 | None:intergenic | 25.0% |
! | TAAGAAATGAAATCACACAA+TGG | + | chr3_4:58078013-58078032 | None:intergenic | 25.0% |
! | ATTGTGTGATTTCATTTCTT+AGG | - | chr3_4:58078012-58078031 | Msa0509620:CDS | 25.0% |
!!! | GGATAATATATGGTTTTATG+AGG | - | chr3_4:58078033-58078052 | Msa0509620:CDS | 25.0% |
! | AATAGCACGAATTAAGATAA+GGG | + | chr3_4:58078244-58078263 | None:intergenic | 25.0% |
! | TTAGCGAGAAAAATAAATTG+TGG | - | chr3_4:58078275-58078294 | Msa0509620:intron | 25.0% |
! | AATTGTTCCTATAATTCATG+GGG | + | chr3_4:58078456-58078475 | None:intergenic | 25.0% |
! | AGTAAAAGGAACAAGTTATA+AGG | - | chr3_4:58078490-58078509 | Msa0509620:intron | 25.0% |
!! | TTAAACATTTTTCTATGGCT+AGG | - | chr3_4:58078539-58078558 | Msa0509620:intron | 25.0% |
!! | TGTTGTTGATAAAATGAAAC+AGG | - | chr3_4:58078644-58078663 | Msa0509620:intron | 25.0% |
! | TTATAAAAGTAATAGCTGGA+AGG | + | chr3_4:58078747-58078766 | None:intergenic | 25.0% |
!!! | TCCAGCTATTACTTTTATAA+TGG | - | chr3_4:58078747-58078766 | Msa0509620:CDS | 25.0% |
!! | TGCTTATCTTAATTCAAGTT+TGG | + | chr3_4:58079023-58079042 | None:intergenic | 25.0% |
!! | TTATATCAAGTTGTTGTAGT+TGG | - | chr3_4:58079423-58079442 | Msa0509620:intron | 25.0% |
!! | TATATCAAGTTGTTGTAGTT+GGG | - | chr3_4:58079424-58079443 | Msa0509620:intron | 25.0% |
! | TATGTTGATGTTTGGTTAAT+TGG | + | chr3_4:58079480-58079499 | None:intergenic | 25.0% |
! | AAATCTTTAGCCATATCTAA+CGG | + | chr3_4:58079568-58079587 | None:intergenic | 25.0% |
!!! | GATCCATTTTTCAAAGAAAT+AGG | - | chr3_4:58079638-58079657 | Msa0509620:intron | 25.0% |
!! | TGACCTATTTCTTTGAAAAA+TGG | + | chr3_4:58079644-58079663 | None:intergenic | 25.0% |
!!! | GTTACATATTTTAAGAGAAG+TGG | + | chr3_4:58080168-58080187 | None:intergenic | 25.0% |
! | TTTGAGAACAGAAAAAGTTA+AGG | + | chr3_4:58080652-58080671 | None:intergenic | 25.0% |
! | TCAACTTACCATTAGCATTT+TGG | + | chr3_4:58076822-58076841 | None:intergenic | 30.0% |
ACTATGGTTTCTTTCAAACA+TGG | - | chr3_4:58076925-58076944 | Msa0509620:three_prime_UTR | 30.0% | |
GTTGAAAGAGACATAAAAAG+AGG | + | chr3_4:58077055-58077074 | None:intergenic | 30.0% | |
CTTGACAACAAAATTTGAGA+CGG | - | chr3_4:58077157-58077176 | Msa0509620:CDS | 30.0% | |
AAACCTTGTTAAGCTTATGA+AGG | + | chr3_4:58077257-58077276 | None:intergenic | 30.0% | |
TATCTTCATGATCATGAGTT+AGG | - | chr3_4:58077441-58077460 | Msa0509620:CDS | 30.0% | |
!! | ATTTCTATTTGCTTTTAGGC+TGG | + | chr3_4:58077880-58077899 | None:intergenic | 30.0% |
! | TTTCGTCCTTATGATTTTTG+TGG | + | chr3_4:58077984-58078003 | None:intergenic | 30.0% |
AGAAATGAAATCACACAATG+GGG | + | chr3_4:58078011-58078030 | None:intergenic | 30.0% | |
!!! | TATATGGTTTTATGAGGCAT+TGG | - | chr3_4:58078039-58078058 | Msa0509620:CDS | 30.0% |
!!! | ATATGGTTTTATGAGGCATT+GGG | - | chr3_4:58078040-58078059 | Msa0509620:CDS | 30.0% |
ATTGTGTAACTTGAAGAGTT+TGG | + | chr3_4:58078129-58078148 | None:intergenic | 30.0% | |
CAATAGCACGAATTAAGATA+AGG | + | chr3_4:58078245-58078264 | None:intergenic | 30.0% | |
CTTATCTTAATTCGTGCTAT+TGG | - | chr3_4:58078243-58078262 | Msa0509620:intron | 30.0% | |
!! | TACAAGTTTTGATCTAGTAC+TGG | + | chr3_4:58078670-58078689 | None:intergenic | 30.0% |
AGATCAAAACTTGTACAACA+TGG | - | chr3_4:58078675-58078694 | Msa0509620:intron | 30.0% | |
GATCAAAACTTGTACAACAT+GGG | - | chr3_4:58078676-58078695 | Msa0509620:intron | 30.0% | |
GCCATTATAAAAGTAATAGC+TGG | + | chr3_4:58078751-58078770 | None:intergenic | 30.0% | |
GTGTTCCTGGAAAAAATAAT+TGG | - | chr3_4:58078867-58078886 | Msa0509620:intron | 30.0% | |
!!! | GGATTCCAATTATTTTTTCC+AGG | + | chr3_4:58078875-58078894 | None:intergenic | 30.0% |
ATGGTTATGACTTTGTACAA+AGG | - | chr3_4:58079296-58079315 | Msa0509620:intron | 30.0% | |
!! | TAACTTATGTTGCTACTTTG+TGG | - | chr3_4:58079704-58079723 | Msa0509620:intron | 30.0% |
!! | AACTTATGTTGCTACTTTGT+GGG | - | chr3_4:58079705-58079724 | Msa0509620:intron | 30.0% |
GAATGGCATATTATGTACAA+GGG | - | chr3_4:58080023-58080042 | Msa0509620:intron | 30.0% | |
AATGGCATATTATGTACAAG+GGG | - | chr3_4:58080024-58080043 | Msa0509620:intron | 30.0% | |
CTGAAAGATGTTACAAAAAC+TGG | + | chr3_4:58080070-58080089 | None:intergenic | 30.0% | |
GGAGCTATTATCATTGTTAT+TGG | - | chr3_4:58080292-58080311 | Msa0509620:intron | 30.0% | |
! | GATTTTGTACCATTCTTGAT+TGG | + | chr3_4:58080403-58080422 | None:intergenic | 30.0% |
ATCAAGAATGGTACAAAATC+AGG | - | chr3_4:58080403-58080422 | Msa0509620:intron | 30.0% | |
!!! | CCTTTTTTCAATTTTTCAGC+TGG | + | chr3_4:58080463-58080482 | None:intergenic | 30.0% |
CCAGCTGAAAAATTGAAAAA+AGG | - | chr3_4:58080460-58080479 | Msa0509620:CDS | 30.0% | |
! | AGGTTATGAAAGATTTTCTG+CGG | - | chr3_4:58080572-58080591 | Msa0509620:CDS | 30.0% |
TTTCAATTTACCTTCCTAAG+TGG | - | chr3_4:58080607-58080626 | Msa0509620:CDS | 30.0% | |
AAAAGTAAAACCACTTAGGA+AGG | + | chr3_4:58080620-58080639 | None:intergenic | 30.0% | |
AAGCACACACACAAAACTAT+AGG | + | chr3_4:58076748-58076767 | None:intergenic | 35.0% | |
TCCATAGACCAAGAGAAAAA+TGG | - | chr3_4:58076792-58076811 | Msa0509620:three_prime_UTR | 35.0% | |
!! | TCCATTTTTCTCTTGGTCTA+TGG | + | chr3_4:58076796-58076815 | None:intergenic | 35.0% |
ATAGACCAAGAGAAAAATGG+AGG | - | chr3_4:58076795-58076814 | Msa0509620:three_prime_UTR | 35.0% | |
! | GCTAATGGTAAGTTGAACAA+TGG | - | chr3_4:58076826-58076845 | Msa0509620:three_prime_UTR | 35.0% |
ATTGAAGGGACAATATAGCA+AGG | + | chr3_4:58076879-58076898 | None:intergenic | 35.0% | |
GCTATATTGTCCCTTCAATT+TGG | - | chr3_4:58076880-58076899 | Msa0509620:three_prime_UTR | 35.0% | |
AAAGAGGAAGAAAATGATCG+AGG | + | chr3_4:58077039-58077058 | None:intergenic | 35.0% | |
TTGCCTTCATAAGCTTAACA+AGG | - | chr3_4:58077251-58077270 | Msa0509620:intron | 35.0% | |
GATACTGCGAATATAGCATT+AGG | + | chr3_4:58077391-58077410 | None:intergenic | 35.0% | |
AAATTGCAAGACCAAGCAAA+AGG | + | chr3_4:58077679-58077698 | None:intergenic | 35.0% | |
!! | GCTTTTAGGCTGGTTAAATA+AGG | + | chr3_4:58077870-58077889 | None:intergenic | 35.0% |
! | CTTATGATTTTTGTGGTGGT+GGG | + | chr3_4:58077977-58077996 | None:intergenic | 35.0% |
GCGAGAAAAATAAATTGTGG+AGG | - | chr3_4:58078278-58078297 | Msa0509620:intron | 35.0% | |
TAGCAATCCCCATGAATTAT+AGG | - | chr3_4:58078446-58078465 | Msa0509620:intron | 35.0% | |
TTATAATGGCTCTCACTTTC+AGG | - | chr3_4:58078761-58078780 | Msa0509620:CDS | 35.0% | |
AAACTAATGTGCTTACGCAA+AGG | - | chr3_4:58078822-58078841 | Msa0509620:intron | 35.0% | |
TCCTCGTCCACTAATTAATA+TGG | + | chr3_4:58078918-58078937 | None:intergenic | 35.0% | |
GTGTGACAAACTAGTAGTAA+GGG | + | chr3_4:58078952-58078971 | None:intergenic | 35.0% | |
AGTGTGACAAACTAGTAGTA+AGG | + | chr3_4:58078953-58078972 | None:intergenic | 35.0% | |
TACAACCGTTCCAATTACTT+TGG | + | chr3_4:58079261-58079280 | None:intergenic | 35.0% | |
CCTTTATGATTTGATAGGCA+GGG | + | chr3_4:58079322-58079341 | None:intergenic | 35.0% | |
CCTGCCTATCAAATCATAAA+GGG | - | chr3_4:58079320-58079339 | Msa0509620:intron | 35.0% | |
CTGCCTATCAAATCATAAAG+GGG | - | chr3_4:58079321-58079340 | Msa0509620:intron | 35.0% | |
TGCCTATCAAATCATAAAGG+GGG | - | chr3_4:58079322-58079341 | Msa0509620:intron | 35.0% | |
! | TTGCTTGATGGGTATTATTG+AGG | - | chr3_4:58079783-58079802 | Msa0509620:intron | 35.0% |
! | TGCTTGATGGGTATTATTGA+GGG | - | chr3_4:58079784-58079803 | Msa0509620:intron | 35.0% |
GGAATGGCATATTATGTACA+AGG | - | chr3_4:58080022-58080041 | Msa0509620:intron | 35.0% | |
GCAGTGATAATCATACATAG+TGG | + | chr3_4:58080094-58080113 | None:intergenic | 35.0% | |
TATGATTATCACTGCTGCAT+TGG | - | chr3_4:58080099-58080118 | Msa0509620:intron | 35.0% | |
ATGATTATCACTGCTGCATT+GGG | - | chr3_4:58080100-58080119 | Msa0509620:intron | 35.0% | |
TTAGCTGAACAAGTTCATCT+TGG | - | chr3_4:58080133-58080152 | Msa0509620:CDS | 35.0% | |
!! | TGTTATTGGTCTTTACACTG+TGG | - | chr3_4:58080306-58080325 | Msa0509620:intron | 35.0% |
GATCAATTGCCAATCAAGAA+TGG | - | chr3_4:58080391-58080410 | Msa0509620:intron | 35.0% | |
! | TCAGGATCAGACATTTTTGA+AGG | - | chr3_4:58080421-58080440 | Msa0509620:intron | 35.0% |
CTTCATCATCATGCTTATGT+TGG | + | chr3_4:58080502-58080521 | None:intergenic | 35.0% | |
! | CAATTTTTCCTATCTGCTAG+AGG | - | chr3_4:58080552-58080571 | Msa0509620:CDS | 35.0% |
TTTCATAACCTCTAGCAGAT+AGG | + | chr3_4:58080563-58080582 | None:intergenic | 35.0% | |
!! | TTGGTCCTCCATTTTTCTCT+TGG | + | chr3_4:58076803-58076822 | None:intergenic | 40.0% |
ATGGAGGACCAAAATGCTAA+TGG | - | chr3_4:58076811-58076830 | Msa0509620:three_prime_UTR | 40.0% | |
AGGGACAATATAGCAAGGTA+TGG | + | chr3_4:58076874-58076893 | None:intergenic | 40.0% | |
GTCCCTTCAATTTGGTTACT+CGG | - | chr3_4:58076888-58076907 | Msa0509620:three_prime_UTR | 40.0% | |
TCCCTTCAATTTGGTTACTC+GGG | - | chr3_4:58076889-58076908 | Msa0509620:three_prime_UTR | 40.0% | |
GGGGATGTACATCATTACTA+TGG | - | chr3_4:58076909-58076928 | Msa0509620:three_prime_UTR | 40.0% | |
TCAAACATGGTATGAGCCAT+TGG | - | chr3_4:58076938-58076957 | Msa0509620:three_prime_UTR | 40.0% | |
AGGAAGAAAATGATCGAGGA+AGG | + | chr3_4:58077035-58077054 | None:intergenic | 40.0% | |
TTTCCTTGAGTAAGGCTCTT+CGG | - | chr3_4:58077355-58077374 | Msa0509620:CDS | 40.0% | |
ACTGCGAATATAGCATTAGG+TGG | + | chr3_4:58077388-58077407 | None:intergenic | 40.0% | |
CATAATCTTTCTTGGTTGGG+TGG | - | chr3_4:58077571-58077590 | Msa0509620:intron | 40.0% | |
GAAAATGCAGGGCAATATGA+GGG | + | chr3_4:58077925-58077944 | None:intergenic | 40.0% | |
AGAAAATGCAGGGCAATATG+AGG | + | chr3_4:58077926-58077945 | None:intergenic | 40.0% | |
! | TATTGCCCTGCATTTTCTAG+CGG | - | chr3_4:58077928-58077947 | Msa0509620:intron | 40.0% |
! | CCTTATGATTTTTGTGGTGG+TGG | + | chr3_4:58077978-58077997 | None:intergenic | 40.0% |
CCACCACCACAAAAATCATA+AGG | - | chr3_4:58077975-58077994 | Msa0509620:intron | 40.0% | |
! | CGTCCTTATGATTTTTGTGG+TGG | + | chr3_4:58077981-58078000 | None:intergenic | 40.0% |
CTGCAATTTGTACTTTGAGC+CGG | + | chr3_4:58078587-58078606 | None:intergenic | 40.0% | |
TAGCTAGAATTGTGTGTTCC+TGG | - | chr3_4:58078854-58078873 | Msa0509620:intron | 40.0% | |
AATCCGACAATTTCGAACCA+TGG | - | chr3_4:58078890-58078909 | Msa0509620:intron | 40.0% | |
ATCCGACAATTTCGAACCAT+GGG | - | chr3_4:58078891-58078910 | Msa0509620:intron | 40.0% | |
CACTAATTAATATGGCCCCA+TGG | + | chr3_4:58078910-58078929 | None:intergenic | 40.0% | |
CATGGGGCCATATTAATTAG+TGG | - | chr3_4:58078908-58078927 | Msa0509620:intron | 40.0% | |
! | GCCATATTAATTAGTGGACG+AGG | - | chr3_4:58078914-58078933 | Msa0509620:intron | 40.0% |
! | CTAGTTTGTCACACTTTGCA+AGG | - | chr3_4:58078958-58078977 | Msa0509620:intron | 40.0% |
CGTAGCCAAAGTAATTGGAA+CGG | - | chr3_4:58079253-58079272 | Msa0509620:intron | 40.0% | |
CATAACCATAGCTCCTGAAA+CGG | + | chr3_4:58079285-58079304 | None:intergenic | 40.0% | |
CCCTGCCTATCAAATCATAA+AGG | - | chr3_4:58079319-58079338 | Msa0509620:intron | 40.0% | |
CCCTTTATGATTTGATAGGC+AGG | + | chr3_4:58079323-58079342 | None:intergenic | 40.0% | |
GCCTATCAAATCATAAAGGG+GGG | - | chr3_4:58079323-58079342 | Msa0509620:intron | 40.0% | |
TCCCCCCTTTATGATTTGAT+AGG | + | chr3_4:58079327-58079346 | None:intergenic | 40.0% | |
TATCAAATCATAAAGGGGGG+AGG | - | chr3_4:58079326-58079345 | Msa0509620:intron | 40.0% | |
!! | ATTTTGGTCAGATGGTTGCT+CGG | + | chr3_4:58079381-58079400 | None:intergenic | 40.0% |
AGCAACCATCTGACCAAAAT+TGG | - | chr3_4:58079381-58079400 | Msa0509620:intron | 40.0% | |
GCAACCATCTGACCAAAATT+GGG | - | chr3_4:58079382-58079401 | Msa0509620:intron | 40.0% | |
!! | ATCACCCAATTTTGGTCAGA+TGG | + | chr3_4:58079389-58079408 | None:intergenic | 40.0% |
ATCTGACCAAAATTGGGTGA+TGG | - | chr3_4:58079388-58079407 | Msa0509620:intron | 40.0% | |
TCTGACCAAAATTGGGTGAT+GGG | - | chr3_4:58079389-58079408 | Msa0509620:intron | 40.0% | |
! | ACAGCATGGATTTGCTTGAT+GGG | - | chr3_4:58079772-58079791 | Msa0509620:intron | 40.0% |
TTGAAAGAGACATGAGTGTG+TGG | - | chr3_4:58079827-58079846 | Msa0509620:intron | 40.0% | |
TGAAAGAGACATGAGTGTGT+GGG | - | chr3_4:58079828-58079847 | Msa0509620:intron | 40.0% | |
CTGAACAAGTTCATCTTGGA+AGG | - | chr3_4:58080137-58080156 | Msa0509620:CDS | 40.0% | |
! | TTGGTCTTTACACTGTGGTA+TGG | - | chr3_4:58080311-58080330 | Msa0509620:intron | 40.0% |
TGGTCTTTACACTGTGGTAT+GGG | - | chr3_4:58080312-58080331 | Msa0509620:intron | 40.0% | |
TCTTGATTGGCAATTGATCC+TGG | + | chr3_4:58080390-58080409 | None:intergenic | 40.0% | |
!! | TCTTGGTCTATGGAAGCACT+GGG | + | chr3_4:58076786-58076805 | None:intergenic | 45.0% |
CCCCGAGTAACCAAATTGAA+GGG | + | chr3_4:58076893-58076912 | None:intergenic | 45.0% | |
CCCTTCAATTTGGTTACTCG+GGG | - | chr3_4:58076890-58076909 | Msa0509620:three_prime_UTR | 45.0% | |
TCCCCGAGTAACCAAATTGA+AGG | + | chr3_4:58076894-58076913 | None:intergenic | 45.0% | |
TAATTGCGGCCACAACATGA+CGG | + | chr3_4:58076978-58076997 | None:intergenic | 45.0% | |
AAGATGGGGAGAGTCATCTT+TGG | + | chr3_4:58077314-58077333 | None:intergenic | 45.0% | |
GCACTTGGTTTCCTTGAGTA+AGG | - | chr3_4:58077347-58077366 | Msa0509620:CDS | 45.0% | |
TTCCTTGAGTAAGGCTCTTC+GGG | - | chr3_4:58077356-58077375 | Msa0509620:CDS | 45.0% | |
AATCTTTCTTGGTTGGGTGG+AGG | - | chr3_4:58077574-58077593 | Msa0509620:intron | 45.0% | |
TGAGTCCGCTAGAAAATGCA+GGG | + | chr3_4:58077936-58077955 | None:intergenic | 45.0% | |
ATGAGTCCGCTAGAAAATGC+AGG | + | chr3_4:58077937-58077956 | None:intergenic | 45.0% | |
GGTCTTCTACCTCTATTGCA+CGG | - | chr3_4:58078061-58078080 | Msa0509620:CDS | 45.0% | |
GTCTTCTACCTCTATTGCAC+GGG | - | chr3_4:58078062-58078081 | Msa0509620:CDS | 45.0% | |
TCATTGTACCCGTGCAATAG+AGG | + | chr3_4:58078073-58078092 | None:intergenic | 45.0% | |
GGGGATTGCTAAACAGCTAT+TGG | + | chr3_4:58078437-58078456 | None:intergenic | 45.0% | |
AGCTGGAAGGACATTAACAG+TGG | + | chr3_4:58078734-58078753 | None:intergenic | 45.0% | |
TCCGACAATTTCGAACCATG+GGG | - | chr3_4:58078892-58078911 | Msa0509620:intron | 45.0% | |
TCAGGTTAGAGTCAGTGAAC+TGG | - | chr3_4:58079216-58079235 | Msa0509620:intron | 45.0% | |
CACAGCGTAGCCAAAGTAAT+TGG | - | chr3_4:58079248-58079267 | Msa0509620:intron | 45.0% | |
TGTAACCGTTTCAGGAGCTA+TGG | - | chr3_4:58079277-58079296 | Msa0509620:intron | 45.0% | |
! | TCAAGTTGTTGTAGTTGGGC+TGG | - | chr3_4:58079428-58079447 | Msa0509620:intron | 45.0% |
! | GTTGTGCTGACCGTTAGATA+TGG | - | chr3_4:58079555-58079574 | Msa0509620:intron | 45.0% |
CAATTGTGGGGACCGTTATA+GGG | + | chr3_4:58079595-58079614 | None:intergenic | 45.0% | |
ACAATTGTGGGGACCGTTAT+AGG | + | chr3_4:58079596-58079615 | None:intergenic | 45.0% | |
ATAACGGTCCCCACAATTGT+TGG | - | chr3_4:58079596-58079615 | Msa0509620:intron | 45.0% | |
! | GACAGCATGGATTTGCTTGA+TGG | - | chr3_4:58079771-58079790 | Msa0509620:intron | 45.0% |
GGTCTTTACACTGTGGTATG+GGG | - | chr3_4:58080313-58080332 | Msa0509620:intron | 45.0% | |
TCGTGAAGACACATCAGAGA+TGG | - | chr3_4:58080351-58080370 | Msa0509620:intron | 45.0% | |
CGTGAAGACACATCAGAGAT+GGG | - | chr3_4:58080352-58080371 | Msa0509620:intron | 45.0% | |
GACACATCAGAGATGGGAAA+AGG | - | chr3_4:58080358-58080377 | Msa0509620:intron | 45.0% | |
TCAGAGATGGGAAAAGGTGA+AGG | - | chr3_4:58080364-58080383 | Msa0509620:intron | 45.0% | |
!! | ATAGATAAATAAAATATATT+AGG | + | chr3_4:58077533-58077552 | None:intergenic | 5.0% |
!!! | TATATATTATTTTAAAGTTT+TGG | - | chr3_4:58078357-58078376 | Msa0509620:intron | 5.0% |
! | CTCTTGGTCTATGGAAGCAC+TGG | + | chr3_4:58076787-58076806 | None:intergenic | 50.0% |
GGTACACGGAGAGAATCCAA+TGG | + | chr3_4:58076957-58076976 | None:intergenic | 50.0% | |
CCACTATCCTCAGGAAGATG+GGG | + | chr3_4:58077328-58077347 | None:intergenic | 50.0% | |
GCCACTATCCTCAGGAAGAT+GGG | + | chr3_4:58077329-58077348 | None:intergenic | 50.0% | |
TGCCACTATCCTCAGGAAGA+TGG | + | chr3_4:58077330-58077349 | None:intergenic | 50.0% | |
! | TTCCTGAGGATAGTGGCACT+TGG | - | chr3_4:58077332-58077351 | Msa0509620:CDS | 50.0% |
! | AACCAAGTGCCACTATCCTC+AGG | + | chr3_4:58077337-58077356 | None:intergenic | 50.0% |
ATCCCGAAGAGCCTTACTCA+AGG | + | chr3_4:58077361-58077380 | None:intergenic | 50.0% | |
GTTCTCCATACTCTCTGCAC+GGG | + | chr3_4:58078107-58078126 | None:intergenic | 50.0% | |
GGTTCTCCATACTCTCTGCA+CGG | + | chr3_4:58078108-58078127 | None:intergenic | 50.0% | |
GCCCCATGGTTCGAAATTGT+CGG | + | chr3_4:58078896-58078915 | None:intergenic | 50.0% | |
GGAACGGTTGTAACCGTTTC+AGG | - | chr3_4:58079269-58079288 | Msa0509620:intron | 50.0% | |
! | CTGTGCCCATCACCCAATTT+TGG | + | chr3_4:58079397-58079416 | None:intergenic | 50.0% |
CGGTCAGCACAACTGTTGTA+CGG | + | chr3_4:58079548-58079567 | None:intergenic | 50.0% | |
AGCACGGTCCAACAATTGTG+GGG | + | chr3_4:58079607-58079626 | None:intergenic | 50.0% | |
CAGCACGGTCCAACAATTGT+GGG | + | chr3_4:58079608-58079627 | None:intergenic | 50.0% | |
GGATCTCTTGTGAAGCAGCA+CGG | + | chr3_4:58079623-58079642 | None:intergenic | 50.0% | |
CAGAGCTATCACTGACAGCA+TGG | - | chr3_4:58079758-58079777 | Msa0509620:intron | 50.0% | |
GACATGAGTGTGTGGGTCAT+AGG | - | chr3_4:58079835-58079854 | Msa0509620:intron | 50.0% | |
TGAGTGTGTGGGTCATAGGT+TGG | - | chr3_4:58079839-58079858 | Msa0509620:intron | 50.0% | |
GAGTGTGTGGGTCATAGGTT+GGG | - | chr3_4:58079840-58079859 | Msa0509620:intron | 50.0% | |
AACCAGGGTGTGATATGCTC+TGG | - | chr3_4:58080001-58080020 | Msa0509620:intron | 50.0% | |
TTCCAGAGCATATCACACCC+TGG | + | chr3_4:58080006-58080025 | None:intergenic | 50.0% | |
!! | GGGTGTGATATGCTCTGGAA+TGG | - | chr3_4:58080006-58080025 | Msa0509620:intron | 50.0% |
GGGGTTGTAACTAGAGAACG+TGG | - | chr3_4:58080043-58080062 | Msa0509620:intron | 50.0% | |
CTCCGTGTACCGTCATGTTG+TGG | - | chr3_4:58076966-58076985 | Msa0509620:CDS | 55.0% | |
GGCCACAACATGACGGTACA+CGG | + | chr3_4:58076971-58076990 | None:intergenic | 55.0% | |
CTTTCGAGCACAAGCGCGAA+AGG | + | chr3_4:58077009-58077028 | None:intergenic | 55.0% | |
CTTTCGCGCTTGTGCTCGAA+AGG | - | chr3_4:58077007-58077026 | Msa0509620:CDS | 55.0% | |
TGACTCTCCCCATCTTCCTG+AGG | - | chr3_4:58077318-58077337 | Msa0509620:CDS | 55.0% | |
CCCCATCTTCCTGAGGATAG+TGG | - | chr3_4:58077325-58077344 | Msa0509620:CDS | 55.0% | |
GTCAGATGGTTGCTCGGTTG+CGG | + | chr3_4:58079375-58079394 | None:intergenic | 55.0% | |
GCAGCACGGTCCAACAATTG+TGG | + | chr3_4:58079609-58079628 | None:intergenic | 55.0% | |
! | GCTGTCAGTGATAGCTCTGC+TGG | + | chr3_4:58079757-58079776 | None:intergenic | 55.0% |
! | GGGTCATAGGTTGGGACTCA+AGG | - | chr3_4:58079848-58079867 | Msa0509620:intron | 55.0% |
GATGGGAAAAGGTGAAGGCC+AGG | - | chr3_4:58080369-58080388 | Msa0509620:intron | 55.0% | |
CTGCACCCGTGCAGAGAGTA+TGG | - | chr3_4:58078099-58078118 | Msa0509620:CDS | 60.0% | |
AGATGGTTGCTCGGTTGCGG+CGG | + | chr3_4:58079372-58079391 | None:intergenic | 60.0% | |
! | GGCGGAGGCGTGGTGGTTGA+TGG | + | chr3_4:58079354-58079373 | None:intergenic | 70.0% |
TGGTTGCTCGGTTGCGGCGG+AGG | + | chr3_4:58079369-58079388 | None:intergenic | 70.0% | |
!! | CGGTTGCGGCGGAGGCGTGG+TGG | + | chr3_4:58079361-58079380 | None:intergenic | 80.0% |
! | GCTCGGTTGCGGCGGAGGCG+TGG | + | chr3_4:58079364-58079383 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 58076723 | 58080746 | 58076723 | ID=Msa0509620;Name=Msa0509620 |
chr3_4 | mRNA | 58076723 | 58080746 | 58076723 | ID=Msa0509620-mRNA-1;Parent=Msa0509620;Name=Msa0509620-mRNA-1;_AED=0.31;_eAED=0.31;_QI=88|1|1|1|1|1|7|239|392 |
chr3_4 | exon | 58076723 | 58077184 | 58076723 | ID=Msa0509620-mRNA-1:exon:13483;Parent=Msa0509620-mRNA-1 |
chr3_4 | exon | 58077311 | 58077462 | 58077311 | ID=Msa0509620-mRNA-1:exon:13482;Parent=Msa0509620-mRNA-1 |
chr3_4 | exon | 58077578 | 58077736 | 58077578 | ID=Msa0509620-mRNA-1:exon:13481;Parent=Msa0509620-mRNA-1 |
chr3_4 | exon | 58078003 | 58078249 | 58078003 | ID=Msa0509620-mRNA-1:exon:13480;Parent=Msa0509620-mRNA-1 |
chr3_4 | exon | 58078687 | 58078803 | 58078687 | ID=Msa0509620-mRNA-1:exon:13479;Parent=Msa0509620-mRNA-1 |
chr3_4 | exon | 58080106 | 58080168 | 58080106 | ID=Msa0509620-mRNA-1:exon:13478;Parent=Msa0509620-mRNA-1 |
chr3_4 | exon | 58080441 | 58080746 | 58080441 | ID=Msa0509620-mRNA-1:exon:13477;Parent=Msa0509620-mRNA-1 |
chr3_4 | five_prime_UTR | 58080659 | 58080746 | 58080659 | ID=Msa0509620-mRNA-1:five_prime_utr;Parent=Msa0509620-mRNA-1 |
chr3_4 | CDS | 58080441 | 58080658 | 58080441 | ID=Msa0509620-mRNA-1:cds;Parent=Msa0509620-mRNA-1 |
chr3_4 | CDS | 58080106 | 58080168 | 58080106 | ID=Msa0509620-mRNA-1:cds;Parent=Msa0509620-mRNA-1 |
chr3_4 | CDS | 58078687 | 58078803 | 58078687 | ID=Msa0509620-mRNA-1:cds;Parent=Msa0509620-mRNA-1 |
chr3_4 | CDS | 58078003 | 58078249 | 58078003 | ID=Msa0509620-mRNA-1:cds;Parent=Msa0509620-mRNA-1 |
chr3_4 | CDS | 58077578 | 58077736 | 58077578 | ID=Msa0509620-mRNA-1:cds;Parent=Msa0509620-mRNA-1 |
chr3_4 | CDS | 58077311 | 58077462 | 58077311 | ID=Msa0509620-mRNA-1:cds;Parent=Msa0509620-mRNA-1 |
chr3_4 | CDS | 58076962 | 58077184 | 58076962 | ID=Msa0509620-mRNA-1:cds;Parent=Msa0509620-mRNA-1 |
chr3_4 | three_prime_UTR | 58076723 | 58076961 | 58076723 | ID=Msa0509620-mRNA-1:three_prime_utr;Parent=Msa0509620-mRNA-1 |
Gene Sequence |
Protein sequence |