AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0370680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370680 MtrunA17_Chr3g0116471 97.588 456 11 0 16 471 197 652 0.0 897
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370680 AT5G63200.1 67.621 454 147 0 16 469 192 645 0.0 603
Msa0370680 AT5G63200.2 64.978 454 143 1 16 469 192 629 0.0 563

Find 115 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTATGCATTTGCTATTAC+TGG 0.169530 3_1:+68574515 Msa0370680:CDS
ATGGAAAATCAGCCCATATT+TGG 0.232379 3_1:+68574483 Msa0370680:CDS
AGGCAAGATTTGCCCAAATA+TGG 0.241338 3_1:-68574496 None:intergenic
ACATGCTATACTATCCAATA+TGG 0.254925 3_1:+68575770 Msa0370680:CDS
CTGATGAACTTTCTATTATC+AGG 0.262072 3_1:-68573379 None:intergenic
ATACAAACGGGCTTTGTCTT+TGG 0.278428 3_1:+68575731 Msa0370680:CDS
TGAATCACCATCTCTTATTA+TGG 0.288105 3_1:-68575013 None:intergenic
AATTGCCTTCAGTGGAGATT+TGG 0.290767 3_1:+68574130 Msa0370680:intron
AGCCAAGTCTAACTTGATTA+AGG 0.308789 3_1:+68575980 Msa0370680:CDS
TTGTTGCCAGGCAGCAAAAC+TGG 0.318733 3_1:+68574879 Msa0370680:intron
TGCTCCTGCATTCAACAATC+TGG 0.324831 3_1:+68575872 Msa0370680:CDS
TATGATTGCCTTGGTAATCT+TGG 0.327367 3_1:+68573726 Msa0370680:CDS
GTGCTTTGAAAATGAGCAAT+TGG 0.328865 3_1:+68576198 Msa0370680:three_prime_UTR
AATCAACGCAATCGGATATC+AGG 0.341521 3_1:+68573465 Msa0370680:CDS
GCCTTCACAGTCTTTGTGCC+AGG 0.342048 3_1:+68575408 Msa0370680:CDS
CCATTTGAACTTACATTTGA+AGG 0.365538 3_1:-68573758 None:intergenic
AGTGAATTGCTTTCGTCTGC+TGG 0.367442 3_1:+68574976 Msa0370680:CDS
AGCAATAAATTACCTGCTTT+AGG 0.373226 3_1:-68575164 None:intergenic
GCAAGCCCGGCCCAAGCTAT+TGG 0.379294 3_1:-68575051 None:intergenic
CGTTGCTAGCCATCGAATAA+AGG 0.384491 3_1:+68574930 Msa0370680:CDS
TGGAAAATCAGCCCATATTT+GGG 0.385543 3_1:+68574484 Msa0370680:CDS
TATCGAGCAGACATGCAATT+AGG 0.390161 3_1:-68574904 None:intergenic
TCAAAACCATCCTGCAGCTT+TGG 0.391132 3_1:+68574193 Msa0370680:CDS
ATAAATTACCTGCTTTAGGC+TGG 0.405602 3_1:-68575160 None:intergenic
TGCTTTCTCAAAACAATACT+TGG 0.410693 3_1:-68575931 None:intergenic
GCGATAGAGAATTCCCATAT+TGG 0.414575 3_1:-68575784 None:intergenic
ATGATTGCCTTGGTAATCTT+GGG 0.414967 3_1:+68573727 Msa0370680:CDS
TCGAATTTCCAGCAAGTGCT+TGG 0.422363 3_1:+68574544 Msa0370680:CDS
TGCCACTGAACTGCATCATC+TGG 0.425008 3_1:-68575377 None:intergenic
GTTTGAAATCAAAGAGGAAC+GGG 0.425232 3_1:+68576159 Msa0370680:three_prime_UTR
GAGCTTCCAATAGCTTGGGC+CGG 0.434057 3_1:+68575045 Msa0370680:CDS
TGGTTGAGCTTCCAATAGCT+TGG 0.439259 3_1:+68575040 Msa0370680:CDS
CCTATGCATTTGCTATTACT+GGG 0.443329 3_1:+68574516 Msa0370680:CDS
CTTGTGGACCATTGCAAGCC+CGG 0.452199 3_1:-68575064 None:intergenic
TTCCAGCAAGTGCTTGGAAA+AGG 0.452640 3_1:+68574550 Msa0370680:CDS
CGGCAAAGGAGAATTGTATA+TGG 0.453372 3_1:+68572206 Msa0370680:CDS
ATCCTTCGCGATGGTCTTCA+CGG 0.453570 3_1:+68572186 None:intergenic
GGTTGAGCTTCCAATAGCTT+GGG 0.461056 3_1:+68575041 Msa0370680:CDS
CTTAGCAACATTAGCAGCCA+TGG 0.461461 3_1:-68574432 None:intergenic
CATCCAGCATTGAATCTGAT+TGG 0.463555 3_1:-68575956 None:intergenic
GCTGCTGTTGCCTGTGACAA+GGG 0.471686 3_1:+68575461 Msa0370680:CDS
AGCTTCCAATAGCTTGGGCC+GGG 0.472014 3_1:+68575046 Msa0370680:CDS
CACAGGCAACAGCAGCTTTG+AGG 0.473023 3_1:-68575454 None:intergenic
CTCTGGTGCAATGGCTAACA+AGG 0.477527 3_1:-68573700 None:intergenic
TCTTAAAACTGGCCGTGTGC+AGG 0.483852 3_1:+68573523 Msa0370680:CDS
TTAGCTGCAGTTAAAGCAGA+TGG 0.490121 3_1:+68574464 Msa0370680:CDS
AGCAGCATACGAAAGTGAAC+AGG 0.492446 3_1:+68575104 Msa0370680:CDS
TTTCTGCCTCCTTTATTCGA+TGG 0.493557 3_1:-68574939 None:intergenic
CCAAGGCAATCATAGTTCTC+TGG 0.493751 3_1:-68573717 None:intergenic
AAGCTATTGGAAGCTCAACC+AGG 0.494761 3_1:-68575038 None:intergenic
TGCTTTGAAAATGAGCAATT+GGG 0.495781 3_1:+68576199 Msa0370680:three_prime_UTR
GGCAAGATTTGCCCAAATAT+GGG 0.501539 3_1:-68574495 None:intergenic
ATGAAGGAACGGCAGAAGAA+AGG 0.501907 3_1:-68576073 None:intergenic
GATTTGATTATTCTAAATGA+AGG 0.504022 3_1:-68576089 None:intergenic
ACTGAAAGAATCAACGCAAT+CGG 0.504512 3_1:+68573457 Msa0370680:CDS
ATATCAGGCAGGCAGCTGTA+TGG 0.504895 3_1:+68573480 Msa0370680:CDS
AAGTCACTTGAACTTCAGCC+TGG 0.506218 3_1:+68575846 Msa0370680:CDS
CCTTCACAGTCTTTGTGCCA+GGG 0.508302 3_1:+68575409 Msa0370680:CDS
TGCTGTTTCCAGCCTAAAGC+AGG 0.510009 3_1:+68575152 Msa0370680:CDS
CATGCTATACTATCCAATAT+GGG 0.512664 3_1:+68575771 Msa0370680:CDS
TTGAATGCAGGAGCATATCC+AGG 0.515164 3_1:-68575864 None:intergenic
AAGCTGAAGAAGTATACAAA+CGG 0.516822 3_1:+68575718 Msa0370680:CDS
ATATCTCATGCTGAGCCTTG+TGG 0.521865 3_1:-68575080 None:intergenic
AGCTGAAGAAGTATACAAAC+GGG 0.524553 3_1:+68575719 Msa0370680:CDS
TCTCATACTAACTTGAGGGT+TGG 0.532891 3_1:-68572233 None:intergenic
AGCTGCTGTTGCCTGTGACA+AGG 0.533743 3_1:+68575460 Msa0370680:CDS
CGCGATGGTCTTCACGGCAA+AGG 0.533905 3_1:+68572192 None:intergenic
TTCGTCTGCTGGAAATGAGA+TGG 0.536129 3_1:+68574987 Msa0370680:CDS
AGCTTGGGCCGGGCTTGCAA+TGG 0.536432 3_1:+68575056 Msa0370680:CDS
CATGGCTGCTAATGTTGCTA+AGG 0.538770 3_1:+68574433 Msa0370680:CDS
GCAGTTCAGTGGCACCAACT+TGG 0.551417 3_1:+68575386 Msa0370680:CDS
ATCATAGTTCTCTGGTGCAA+TGG 0.556060 3_1:-68573709 None:intergenic
AGACCCAGATTGTTGAATGC+AGG 0.558965 3_1:-68575876 None:intergenic
TTTGCATATCTTCGACATTG+TGG 0.559936 3_1:-68576006 None:intergenic
CCAGAGAACTATGATTGCCT+TGG 0.561944 3_1:+68573717 Msa0370680:CDS
GCTCCTGCATTCAACAATCT+GGG 0.562852 3_1:+68575873 Msa0370680:CDS
TTCAAGTGACTTTGTAAACA+TGG 0.562873 3_1:-68575835 None:intergenic
AACCTTAATCAAGTTAGACT+TGG 0.563544 3_1:-68575982 None:intergenic
GCATAATTGACCAAAGCTGC+AGG 0.564348 3_1:-68574203 None:intergenic
ACTTGAACCTCACGAACTTG+AGG 0.565121 3_1:+68573421 Msa0370680:CDS
CTTTAAGAGTGCATGAGGAA+AGG 0.565441 3_1:-68576031 None:intergenic
ATCATCTGGATCTTCCGCTA+TGG 0.567531 3_1:-68575363 None:intergenic
AAAGACTGTGAAGGCCAAGT+TGG 0.570167 3_1:-68575400 None:intergenic
ATAGCTGCAACCCTTGTCAC+AGG 0.572931 3_1:-68575471 None:intergenic
CGGGCTTGCAATGGTCCACA+AGG 0.573827 3_1:+68575065 Msa0370680:CDS
AACGCAATCGGATATCAGGC+AGG 0.576139 3_1:+68573469 Msa0370680:CDS
TGCAGAGGGTCTGTTAGAAG+AGG 0.580781 3_1:+68575908 Msa0370680:CDS
AAGTGAACAGGACGGGCTGA+AGG 0.584652 3_1:+68575116 Msa0370680:CDS
AAGAGATGGTGATTCATCCC+TGG 0.585366 3_1:+68575020 Msa0370680:CDS
CAAGGATGACAAAACTGAGA+TGG 0.588895 3_1:-68573682 None:intergenic
GGCAGCTGTATGGAATACAC+TGG 0.590135 3_1:+68573490 Msa0370680:CDS
TGCTTCAGCAGAACAATCCA+TGG 0.592004 3_1:+68574415 Msa0370680:CDS
GATTATTCTAAATGAAGGAA+CGG 0.592068 3_1:-68576084 None:intergenic
AGAATTTCCTCAAGTTCGTG+AGG 0.592255 3_1:-68573428 None:intergenic
TCATTCTTTAAGAGTGCATG+AGG 0.604832 3_1:-68576036 None:intergenic
TATATAGTTTGAAATCAAAG+AGG 0.606408 3_1:+68576153 Msa0370680:three_prime_UTR
AGTTTGAAATCAAAGAGGAA+CGG 0.606528 3_1:+68576158 Msa0370680:three_prime_UTR
CATACGAAAGTGAACAGGAC+GGG 0.613115 3_1:+68575109 Msa0370680:CDS
AATTGACCAAAGCTGCAGGA+TGG 0.616871 3_1:-68574199 None:intergenic
ATGGCTTCCATAATAAGAGA+TGG 0.622030 3_1:+68575006 Msa0370680:CDS
ACTCCAATCAGATTCAATGC+TGG 0.622689 3_1:+68575953 Msa0370680:CDS
ATCCAGATGATGCAGTTCAG+TGG 0.625338 3_1:+68575375 Msa0370680:CDS
CTTTATTCGATGGCTAGCAA+CGG 0.626635 3_1:-68574929 None:intergenic
ACAAGGGTTGCAGCTATGCA+TGG 0.627371 3_1:+68575477 Msa0370680:CDS
CCCAGTAATAGCAAATGCAT+AGG 0.627469 3_1:-68574516 None:intergenic
CCCTGGCACAAAGACTGTGA+AGG 0.636813 3_1:-68575409 None:intergenic
GCAGACGAAAGCAATTCACT+AGG 0.646897 3_1:-68574973 None:intergenic
TGCTAGCCATCGAATAAAGG+AGG 0.650686 3_1:+68574933 Msa0370680:CDS
AGCTATTGGAAGCTCAACCA+GGG 0.654408 3_1:-68575037 None:intergenic
AGCTATGCATGGTCTAACCT+CGG 0.657652 3_1:+68575488 Msa0370680:CDS
AAGGTGCATGTACCTGCACA+CGG 0.677017 3_1:-68573535 None:intergenic
GCAGCTGTATGGAATACACT+GGG 0.681640 3_1:+68573491 Msa0370680:CDS
AAGCTATCCCAAGATTACCA+AGG 0.702190 3_1:-68573734 None:intergenic
GCATACGAAAGTGAACAGGA+CGG 0.707663 3_1:+68575108 Msa0370680:CDS
TTAGAATAATCAAATCAGAG+AGG 0.732058 3_1:+68576096 Msa0370680:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCATTTCTTATATAAAA+AGG - chr3_1:68573155-68573174 None:intergenic 10.0%
!!! ACTTATTTTATATATAAAAG+AGG - chr3_1:68573790-68573809 None:intergenic 10.0%
!! ATTTCATTTCTTATATAAAA+AGG - chr3_1:68573155-68573174 None:intergenic 10.0%
!!! ACTTATTTTATATATAAAAG+AGG - chr3_1:68573790-68573809 None:intergenic 10.0%
!! NNNNNNNNNNATTTAGTGAC+TGG - chr3_1:68573186-68573205 None:intergenic 15.0%
!! AATAAGTAAAATGATATACT+TGG + chr3_1:68573803-68573822 Msa0370680:intron 15.0%
!! ATAAGTAAAATGATATACTT+GGG + chr3_1:68573804-68573823 Msa0370680:intron 15.0%
!! AATTAAAACCACAAAAATAT+CGG - chr3_1:68574053-68574072 None:intergenic 15.0%
!!! TTGAAGAAAATTTTGTAATA+TGG + chr3_1:68574334-68574353 Msa0370680:intron 15.0%
!!! ATTTTACATGTATTACATTT+TGG + chr3_1:68574749-68574768 Msa0370680:intron 15.0%
!! NNNNNNNNNNATTTAGTGAC+TGG - chr3_1:68573186-68573205 None:intergenic 15.0%
!! AATAAGTAAAATGATATACT+TGG + chr3_1:68573803-68573822 Msa0370680:intron 15.0%
!! ATAAGTAAAATGATATACTT+GGG + chr3_1:68573804-68573823 Msa0370680:intron 15.0%
!! AATTAAAACCACAAAAATAT+CGG - chr3_1:68574053-68574072 None:intergenic 15.0%
!!! TTGAAGAAAATTTTGTAATA+TGG + chr3_1:68574334-68574353 Msa0370680:intron 15.0%
!!! ATTTTACATGTATTACATTT+TGG + chr3_1:68574749-68574768 Msa0370680:intron 15.0%
!!! AAACCTCTAAAAAATTCATT+TGG + chr3_1:68572732-68572751 Msa0370680:intron 20.0%
!!! TAACCAAATGAATTTTTTAG+AGG - chr3_1:68572738-68572757 None:intergenic 20.0%
!! CTAAAACAAAAAGTTTAATG+TGG - chr3_1:68572913-68572932 None:intergenic 20.0%
!! CGTATAAAATATCAAAAATG+AGG - chr3_1:68573093-68573112 None:intergenic 20.0%
!!! CTTTTTTTACAGTTTGTAAA+GGG - chr3_1:68573116-68573135 None:intergenic 20.0%
!!! TCTTTTTTTACAGTTTGTAA+AGG - chr3_1:68573117-68573136 None:intergenic 20.0%
!! AATAGTATTACACAGAAAAA+AGG - chr3_1:68574008-68574027 None:intergenic 20.0%
!! CATTTATAGTGTATTTATTG+AGG + chr3_1:68574596-68574615 Msa0370680:intron 20.0%
!! GTAATTTATTGCTTTCTTAT+AGG + chr3_1:68575174-68575193 Msa0370680:intron 20.0%
!! GATTTGATTATTCTAAATGA+AGG - chr3_1:68576092-68576111 None:intergenic 20.0%
!!! TATATAGTTTGAAATCAAAG+AGG + chr3_1:68576153-68576172 Msa0370680:three_prime_UTR 20.0%
!!! AAACCTCTAAAAAATTCATT+TGG + chr3_1:68572732-68572751 Msa0370680:intron 20.0%
!!! TAACCAAATGAATTTTTTAG+AGG - chr3_1:68572738-68572757 None:intergenic 20.0%
!! CTAAAACAAAAAGTTTAATG+TGG - chr3_1:68572913-68572932 None:intergenic 20.0%
!! CGTATAAAATATCAAAAATG+AGG - chr3_1:68573093-68573112 None:intergenic 20.0%
!!! CTTTTTTTACAGTTTGTAAA+GGG - chr3_1:68573116-68573135 None:intergenic 20.0%
!!! TCTTTTTTTACAGTTTGTAA+AGG - chr3_1:68573117-68573136 None:intergenic 20.0%
!! AATAGTATTACACAGAAAAA+AGG - chr3_1:68574008-68574027 None:intergenic 20.0%
!! CATTTATAGTGTATTTATTG+AGG + chr3_1:68574596-68574615 Msa0370680:intron 20.0%
!! GTAATTTATTGCTTTCTTAT+AGG + chr3_1:68575174-68575193 Msa0370680:intron 20.0%
!! GATTTGATTATTCTAAATGA+AGG - chr3_1:68576092-68576111 None:intergenic 20.0%
!!! TATATAGTTTGAAATCAAAG+AGG + chr3_1:68576153-68576172 Msa0370680:three_prime_UTR 20.0%
!!! TTTTTTCACCCAAAATTTTG+AGG - chr3_1:68572711-68572730 None:intergenic 25.0%
! ATAAATGCTTCAATTACTCT+CGG + chr3_1:68572812-68572831 Msa0370680:intron 25.0%
!! AATGAGGCTGATAATATTTT+GGG - chr3_1:68573077-68573096 None:intergenic 25.0%
!! AAATGAGGCTGATAATATTT+TGG - chr3_1:68573078-68573097 None:intergenic 25.0%
! TGCATATGTTACAAACTAAA+GGG - chr3_1:68573869-68573888 None:intergenic 25.0%
! TTGCATATGTTACAAACTAA+AGG - chr3_1:68573870-68573889 None:intergenic 25.0%
! GTTTGAATATTTCTTAGAAC+AGG - chr3_1:68573986-68574005 None:intergenic 25.0%
! TCATATTAAAGGACAAATCA+AGG - chr3_1:68574303-68574322 None:intergenic 25.0%
! TCGCTACATAATCATATTAA+AGG - chr3_1:68574314-68574333 None:intergenic 25.0%
!! ATGGTTTTCATTTTGTCATA+TGG + chr3_1:68574353-68574372 Msa0370680:intron 25.0%
!!! TCATATGGATTTTTAATTCC+AGG + chr3_1:68574368-68574387 Msa0370680:intron 25.0%
! ACTATAAATGATTGTAGCAA+GGG - chr3_1:68574586-68574605 None:intergenic 25.0%
! TATTTATTGAGGTTGTTCAT+TGG + chr3_1:68574607-68574626 Msa0370680:intron 25.0%
!!! TCAAGCAGATCATTTTTTTT+TGG + chr3_1:68574685-68574704 Msa0370680:intron 25.0%
!!! AGATGGGTTAATAAAAACAA+GGG - chr3_1:68574802-68574821 None:intergenic 25.0%
!!! AAGATGGGTTAATAAAAACA+AGG - chr3_1:68574803-68574822 None:intergenic 25.0%
! AAATTAGCAAGTGTATACTT+AGG - chr3_1:68575245-68575264 None:intergenic 25.0%
! TATTATCTCACATAGTTGTT+TGG + chr3_1:68575317-68575336 Msa0370680:intron 25.0%
!! TGTATCATTCTTTTTCTACT+AGG + chr3_1:68575340-68575359 Msa0370680:intron 25.0%
! TGGGTTAAAAATGTATGAAT+AGG + chr3_1:68575663-68575682 Msa0370680:intron 25.0%
! GAAAAAATATGAACTTGCAA+AGG + chr3_1:68575812-68575831 Msa0370680:CDS 25.0%
! GATTATTCTAAATGAAGGAA+CGG - chr3_1:68576087-68576106 None:intergenic 25.0%
! TTAGAATAATCAAATCAGAG+AGG + chr3_1:68576096-68576115 Msa0370680:three_prime_UTR 25.0%
!!! TTCTTTTTTGAGTTCATTTC+AGG + chr3_1:68576237-68576256 Msa0370680:three_prime_UTR 25.0%
!!! TTTTTTCACCCAAAATTTTG+AGG - chr3_1:68572711-68572730 None:intergenic 25.0%
! ATAAATGCTTCAATTACTCT+CGG + chr3_1:68572812-68572831 Msa0370680:intron 25.0%
!! AATGAGGCTGATAATATTTT+GGG - chr3_1:68573077-68573096 None:intergenic 25.0%
!! AAATGAGGCTGATAATATTT+TGG - chr3_1:68573078-68573097 None:intergenic 25.0%
! TGCATATGTTACAAACTAAA+GGG - chr3_1:68573869-68573888 None:intergenic 25.0%
! TTGCATATGTTACAAACTAA+AGG - chr3_1:68573870-68573889 None:intergenic 25.0%
! GTTTGAATATTTCTTAGAAC+AGG - chr3_1:68573986-68574005 None:intergenic 25.0%
! TCATATTAAAGGACAAATCA+AGG - chr3_1:68574303-68574322 None:intergenic 25.0%
! TCGCTACATAATCATATTAA+AGG - chr3_1:68574314-68574333 None:intergenic 25.0%
!! ATGGTTTTCATTTTGTCATA+TGG + chr3_1:68574353-68574372 Msa0370680:intron 25.0%
!!! TCATATGGATTTTTAATTCC+AGG + chr3_1:68574368-68574387 Msa0370680:intron 25.0%
! ACTATAAATGATTGTAGCAA+GGG - chr3_1:68574586-68574605 None:intergenic 25.0%
! TATTTATTGAGGTTGTTCAT+TGG + chr3_1:68574607-68574626 Msa0370680:intron 25.0%
!!! TCAAGCAGATCATTTTTTTT+TGG + chr3_1:68574685-68574704 Msa0370680:intron 25.0%
!!! AGATGGGTTAATAAAAACAA+GGG - chr3_1:68574802-68574821 None:intergenic 25.0%
!!! AAGATGGGTTAATAAAAACA+AGG - chr3_1:68574803-68574822 None:intergenic 25.0%
! AAATTAGCAAGTGTATACTT+AGG - chr3_1:68575245-68575264 None:intergenic 25.0%
! TATTATCTCACATAGTTGTT+TGG + chr3_1:68575317-68575336 Msa0370680:intron 25.0%
!! TGTATCATTCTTTTTCTACT+AGG + chr3_1:68575340-68575359 Msa0370680:intron 25.0%
! TGGGTTAAAAATGTATGAAT+AGG + chr3_1:68575663-68575682 Msa0370680:intron 25.0%
! GAAAAAATATGAACTTGCAA+AGG + chr3_1:68575812-68575831 Msa0370680:CDS 25.0%
! GATTATTCTAAATGAAGGAA+CGG - chr3_1:68576087-68576106 None:intergenic 25.0%
! TTAGAATAATCAAATCAGAG+AGG + chr3_1:68576096-68576115 Msa0370680:three_prime_UTR 25.0%
!!! TTCTTTTTTGAGTTCATTTC+AGG + chr3_1:68576237-68576256 Msa0370680:three_prime_UTR 25.0%
TCATTCTCATACTAACTTGA+GGG - chr3_1:68572240-68572259 None:intergenic 30.0%
ATCATTCTCATACTAACTTG+AGG - chr3_1:68572241-68572260 None:intergenic 30.0%
GGTAAAAATGAATTGTACCT+TGG + chr3_1:68572280-68572299 Msa0370680:intron 30.0%
AAAAATGAATTGTACCTTGG+AGG + chr3_1:68572283-68572302 Msa0370680:intron 30.0%
ATGTGAAATAAATTCTCCTC+AGG + chr3_1:68572603-68572622 Msa0370680:intron 30.0%
GAATTATTAACATGCAAAGC+CGG + chr3_1:68572657-68572676 Msa0370680:intron 30.0%
! GAGAGTAATTGAAGCATTTA+TGG - chr3_1:68572813-68572832 None:intergenic 30.0%
! TCGGTCATGAATTCAAATTT+TGG + chr3_1:68572831-68572850 Msa0370680:intron 30.0%
TTCTATTATCAGGCACTATA+AGG - chr3_1:68573372-68573391 None:intergenic 30.0%
CTGATGAACTTTCTATTATC+AGG - chr3_1:68573382-68573401 None:intergenic 30.0%
!! GGTTTTATCCTTCTTAAAAC+TGG + chr3_1:68573512-68573531 Msa0370680:CDS 30.0%
!! TTTGAAGTTTACATTGGTTC+AGG - chr3_1:68573647-68573666 None:intergenic 30.0%
CCATTTGAACTTACATTTGA+AGG - chr3_1:68573761-68573780 None:intergenic 30.0%
CCTTCAAATGTAAGTTCAAA+TGG + chr3_1:68573758-68573777 Msa0370680:intron 30.0%
!! GAGAAATACCGATATTTTTG+TGG + chr3_1:68574042-68574061 Msa0370680:intron 30.0%
TTTAGTTAGTAACAGTACTG+AGG - chr3_1:68574112-68574131 None:intergenic 30.0%
!! CTGAAGCATTTTTACACAAA+AGG - chr3_1:68574235-68574254 None:intergenic 30.0%
CTATAAATGATTGTAGCAAG+GGG - chr3_1:68574585-68574604 None:intergenic 30.0%
CACTATAAATGATTGTAGCA+AGG - chr3_1:68574587-68574606 None:intergenic 30.0%
TTTCCATGATTAAAGATAGC+TGG + chr3_1:68574714-68574733 Msa0370680:intron 30.0%
! TTTTATTAACCCATCTTCTG+AGG + chr3_1:68574806-68574825 Msa0370680:intron 30.0%
CACTAAATCACAATCTACAT+TGG - chr3_1:68574841-68574860 None:intergenic 30.0%
TGAATCACCATCTCTTATTA+TGG - chr3_1:68575016-68575035 None:intergenic 30.0%
AGCAATAAATTACCTGCTTT+AGG - chr3_1:68575167-68575186 None:intergenic 30.0%
CTTGTCTGATGTTAAATGTT+TGG + chr3_1:68575279-68575298 Msa0370680:intron 30.0%
! TGAAGTGAATAACCCTTTTA+CGG - chr3_1:68575641-68575660 None:intergenic 30.0%
AAAGGGTTATTCACTTCATA+TGG + chr3_1:68575643-68575662 Msa0370680:intron 30.0%
AAGGGTTATTCACTTCATAT+GGG + chr3_1:68575644-68575663 Msa0370680:intron 30.0%
! AAGCTGAAGAAGTATACAAA+CGG + chr3_1:68575718-68575737 Msa0370680:CDS 30.0%
ACATGCTATACTATCCAATA+TGG + chr3_1:68575770-68575789 Msa0370680:CDS 30.0%
CATGCTATACTATCCAATAT+GGG + chr3_1:68575771-68575790 Msa0370680:CDS 30.0%
!!! CAAGTTCATATTTTTTCTGC+TGG - chr3_1:68575809-68575828 None:intergenic 30.0%
TTCAAGTGACTTTGTAAACA+TGG - chr3_1:68575838-68575857 None:intergenic 30.0%
TGCTTTCTCAAAACAATACT+TGG - chr3_1:68575934-68575953 None:intergenic 30.0%
AACCTTAATCAAGTTAGACT+TGG - chr3_1:68575985-68576004 None:intergenic 30.0%
! AGTTTGAAATCAAAGAGGAA+CGG + chr3_1:68576158-68576177 Msa0370680:three_prime_UTR 30.0%
!! TGCTTTGAAAATGAGCAATT+GGG + chr3_1:68576199-68576218 Msa0370680:three_prime_UTR 30.0%
TCATTCTCATACTAACTTGA+GGG - chr3_1:68572240-68572259 None:intergenic 30.0%
ATCATTCTCATACTAACTTG+AGG - chr3_1:68572241-68572260 None:intergenic 30.0%
GGTAAAAATGAATTGTACCT+TGG + chr3_1:68572280-68572299 Msa0370680:intron 30.0%
AAAAATGAATTGTACCTTGG+AGG + chr3_1:68572283-68572302 Msa0370680:intron 30.0%
ATGTGAAATAAATTCTCCTC+AGG + chr3_1:68572603-68572622 Msa0370680:intron 30.0%
GAATTATTAACATGCAAAGC+CGG + chr3_1:68572657-68572676 Msa0370680:intron 30.0%
! GAGAGTAATTGAAGCATTTA+TGG - chr3_1:68572813-68572832 None:intergenic 30.0%
! TCGGTCATGAATTCAAATTT+TGG + chr3_1:68572831-68572850 Msa0370680:intron 30.0%
TTCTATTATCAGGCACTATA+AGG - chr3_1:68573372-68573391 None:intergenic 30.0%
CTGATGAACTTTCTATTATC+AGG - chr3_1:68573382-68573401 None:intergenic 30.0%
!! GGTTTTATCCTTCTTAAAAC+TGG + chr3_1:68573512-68573531 Msa0370680:CDS 30.0%
!! TTTGAAGTTTACATTGGTTC+AGG - chr3_1:68573647-68573666 None:intergenic 30.0%
CCATTTGAACTTACATTTGA+AGG - chr3_1:68573761-68573780 None:intergenic 30.0%
CCTTCAAATGTAAGTTCAAA+TGG + chr3_1:68573758-68573777 Msa0370680:intron 30.0%
!! GAGAAATACCGATATTTTTG+TGG + chr3_1:68574042-68574061 Msa0370680:intron 30.0%
TTTAGTTAGTAACAGTACTG+AGG - chr3_1:68574112-68574131 None:intergenic 30.0%
!! CTGAAGCATTTTTACACAAA+AGG - chr3_1:68574235-68574254 None:intergenic 30.0%
CTATAAATGATTGTAGCAAG+GGG - chr3_1:68574585-68574604 None:intergenic 30.0%
CACTATAAATGATTGTAGCA+AGG - chr3_1:68574587-68574606 None:intergenic 30.0%
TTTCCATGATTAAAGATAGC+TGG + chr3_1:68574714-68574733 Msa0370680:intron 30.0%
! TTTTATTAACCCATCTTCTG+AGG + chr3_1:68574806-68574825 Msa0370680:intron 30.0%
CACTAAATCACAATCTACAT+TGG - chr3_1:68574841-68574860 None:intergenic 30.0%
TGAATCACCATCTCTTATTA+TGG - chr3_1:68575016-68575035 None:intergenic 30.0%
AGCAATAAATTACCTGCTTT+AGG - chr3_1:68575167-68575186 None:intergenic 30.0%
CTTGTCTGATGTTAAATGTT+TGG + chr3_1:68575279-68575298 Msa0370680:intron 30.0%
! TGAAGTGAATAACCCTTTTA+CGG - chr3_1:68575641-68575660 None:intergenic 30.0%
AAAGGGTTATTCACTTCATA+TGG + chr3_1:68575643-68575662 Msa0370680:intron 30.0%
AAGGGTTATTCACTTCATAT+GGG + chr3_1:68575644-68575663 Msa0370680:intron 30.0%
! AAGCTGAAGAAGTATACAAA+CGG + chr3_1:68575718-68575737 Msa0370680:CDS 30.0%
ACATGCTATACTATCCAATA+TGG + chr3_1:68575770-68575789 Msa0370680:CDS 30.0%
CATGCTATACTATCCAATAT+GGG + chr3_1:68575771-68575790 Msa0370680:CDS 30.0%
!!! CAAGTTCATATTTTTTCTGC+TGG - chr3_1:68575809-68575828 None:intergenic 30.0%
TTCAAGTGACTTTGTAAACA+TGG - chr3_1:68575838-68575857 None:intergenic 30.0%
TGCTTTCTCAAAACAATACT+TGG - chr3_1:68575934-68575953 None:intergenic 30.0%
AACCTTAATCAAGTTAGACT+TGG - chr3_1:68575985-68576004 None:intergenic 30.0%
! AGTTTGAAATCAAAGAGGAA+CGG + chr3_1:68576158-68576177 Msa0370680:three_prime_UTR 30.0%
!! TGCTTTGAAAATGAGCAATT+GGG + chr3_1:68576199-68576218 Msa0370680:three_prime_UTR 30.0%
ATGTGAATATGTGCGAAATG+TGG + chr3_1:68572259-68572278 Msa0370680:intron 35.0%
! TTTGGAATTTGACCGTGTTA+CGG - chr3_1:68572504-68572523 None:intergenic 35.0%
!! GCTTTAGGCCTCAAAATTTT+GGG + chr3_1:68572700-68572719 Msa0370680:intron 35.0%
AAAGTACACGTTAATAGAGC+CGG - chr3_1:68572954-68572973 None:intergenic 35.0%
ACTGAAAGAATCAACGCAAT+CGG + chr3_1:68573457-68573476 Msa0370680:CDS 35.0%
TGTGTGGAAAAGAGAAAACA+AGG - chr3_1:68573557-68573576 None:intergenic 35.0%
!! GTTTACATTGGTTCAGGAAA+TGG - chr3_1:68573641-68573660 None:intergenic 35.0%
! TATGATTGCCTTGGTAATCT+TGG + chr3_1:68573726-68573745 Msa0370680:CDS 35.0%
! ATGATTGCCTTGGTAATCTT+GGG + chr3_1:68573727-68573746 Msa0370680:CDS 35.0%
ATTATCACCACATGTCACAT+GGG - chr3_1:68573901-68573920 None:intergenic 35.0%
ACTAACTAAATTGCCTTCAG+TGG + chr3_1:68574122-68574141 Msa0370680:intron 35.0%
TAATTCCAAATCTCCACTGA+AGG - chr3_1:68574138-68574157 None:intergenic 35.0%
!!! GATCTTTTAGGATCAACTCT+TGG - chr3_1:68574175-68574194 None:intergenic 35.0%
!!! CAGGATGGTTTTGATCTTTT+AGG - chr3_1:68574187-68574206 None:intergenic 35.0%
AAAAATGCTTCAGTTGTAGC+AGG + chr3_1:68574242-68574261 Msa0370680:CDS 35.0%
ATGGAAAATCAGCCCATATT+TGG + chr3_1:68574483-68574502 Msa0370680:CDS 35.0%
TGGAAAATCAGCCCATATTT+GGG + chr3_1:68574484-68574503 Msa0370680:CDS 35.0%
!! CCTATGCATTTGCTATTACT+GGG + chr3_1:68574516-68574535 Msa0370680:CDS 35.0%
TCAAAACATTTCCACCAACA+AGG - chr3_1:68574642-68574661 None:intergenic 35.0%
ACTCCAGCTATCTTTAATCA+TGG - chr3_1:68574720-68574739 None:intergenic 35.0%
ATGGCTTCCATAATAAGAGA+TGG + chr3_1:68575006-68575025 Msa0370680:CDS 35.0%
! ATAAATTACCTGCTTTAGGC+TGG - chr3_1:68575163-68575182 None:intergenic 35.0%
GCAAGTGTATACTTAGGATA+AGG - chr3_1:68575239-68575258 None:intergenic 35.0%
!! TAAATGTTTGGTGTCTCTGT+TGG + chr3_1:68575291-68575310 Msa0370680:intron 35.0%
!! TTGTGATGTTTTGAATTCCC+TGG - chr3_1:68575429-68575448 None:intergenic 35.0%
! TATGTGCTTCTTTTCTCTCT+TGG + chr3_1:68575511-68575530 Msa0370680:intron 35.0%
! TTTTCTCTCTTGGCTGTAAT+GGG + chr3_1:68575521-68575540 Msa0370680:intron 35.0%
! CATGTCTTTTTCCCGTAAAA+GGG + chr3_1:68575626-68575645 Msa0370680:intron 35.0%
! GAAGTGAATAACCCTTTTAC+GGG - chr3_1:68575640-68575659 None:intergenic 35.0%
! AGCTGAAGAAGTATACAAAC+GGG + chr3_1:68575719-68575738 Msa0370680:CDS 35.0%
!!! GGTCTTGTTTTTATTGCAGA+GGG + chr3_1:68575894-68575913 Msa0370680:CDS 35.0%
AGCCAAGTCTAACTTGATTA+AGG + chr3_1:68575980-68575999 Msa0370680:CDS 35.0%
TTTGCATATCTTCGACATTG+TGG - chr3_1:68576009-68576028 None:intergenic 35.0%
! TCATTCTTTAAGAGTGCATG+AGG - chr3_1:68576039-68576058 None:intergenic 35.0%
! GTTTGAAATCAAAGAGGAAC+GGG + chr3_1:68576159-68576178 Msa0370680:three_prime_UTR 35.0%
!! GTGCTTTGAAAATGAGCAAT+TGG + chr3_1:68576198-68576217 Msa0370680:three_prime_UTR 35.0%
ATGTGAATATGTGCGAAATG+TGG + chr3_1:68572259-68572278 Msa0370680:intron 35.0%
! TTTGGAATTTGACCGTGTTA+CGG - chr3_1:68572504-68572523 None:intergenic 35.0%
!! GCTTTAGGCCTCAAAATTTT+GGG + chr3_1:68572700-68572719 Msa0370680:intron 35.0%
AAAGTACACGTTAATAGAGC+CGG - chr3_1:68572954-68572973 None:intergenic 35.0%
ACTGAAAGAATCAACGCAAT+CGG + chr3_1:68573457-68573476 Msa0370680:CDS 35.0%
TGTGTGGAAAAGAGAAAACA+AGG - chr3_1:68573557-68573576 None:intergenic 35.0%
!! GTTTACATTGGTTCAGGAAA+TGG - chr3_1:68573641-68573660 None:intergenic 35.0%
! TATGATTGCCTTGGTAATCT+TGG + chr3_1:68573726-68573745 Msa0370680:CDS 35.0%
! ATGATTGCCTTGGTAATCTT+GGG + chr3_1:68573727-68573746 Msa0370680:CDS 35.0%
ATTATCACCACATGTCACAT+GGG - chr3_1:68573901-68573920 None:intergenic 35.0%
ACTAACTAAATTGCCTTCAG+TGG + chr3_1:68574122-68574141 Msa0370680:intron 35.0%
TAATTCCAAATCTCCACTGA+AGG - chr3_1:68574138-68574157 None:intergenic 35.0%
!!! GATCTTTTAGGATCAACTCT+TGG - chr3_1:68574175-68574194 None:intergenic 35.0%
!!! CAGGATGGTTTTGATCTTTT+AGG - chr3_1:68574187-68574206 None:intergenic 35.0%
AAAAATGCTTCAGTTGTAGC+AGG + chr3_1:68574242-68574261 Msa0370680:CDS 35.0%
ATGGAAAATCAGCCCATATT+TGG + chr3_1:68574483-68574502 Msa0370680:CDS 35.0%
TGGAAAATCAGCCCATATTT+GGG + chr3_1:68574484-68574503 Msa0370680:CDS 35.0%
!! CCTATGCATTTGCTATTACT+GGG + chr3_1:68574516-68574535 Msa0370680:CDS 35.0%
TCAAAACATTTCCACCAACA+AGG - chr3_1:68574642-68574661 None:intergenic 35.0%
ACTCCAGCTATCTTTAATCA+TGG - chr3_1:68574720-68574739 None:intergenic 35.0%
ATGGCTTCCATAATAAGAGA+TGG + chr3_1:68575006-68575025 Msa0370680:CDS 35.0%
! ATAAATTACCTGCTTTAGGC+TGG - chr3_1:68575163-68575182 None:intergenic 35.0%
GCAAGTGTATACTTAGGATA+AGG - chr3_1:68575239-68575258 None:intergenic 35.0%
!! TAAATGTTTGGTGTCTCTGT+TGG + chr3_1:68575291-68575310 Msa0370680:intron 35.0%
!! TTGTGATGTTTTGAATTCCC+TGG - chr3_1:68575429-68575448 None:intergenic 35.0%
! TATGTGCTTCTTTTCTCTCT+TGG + chr3_1:68575511-68575530 Msa0370680:intron 35.0%
! TTTTCTCTCTTGGCTGTAAT+GGG + chr3_1:68575521-68575540 Msa0370680:intron 35.0%
! CATGTCTTTTTCCCGTAAAA+GGG + chr3_1:68575626-68575645 Msa0370680:intron 35.0%
! GAAGTGAATAACCCTTTTAC+GGG - chr3_1:68575640-68575659 None:intergenic 35.0%
! AGCTGAAGAAGTATACAAAC+GGG + chr3_1:68575719-68575738 Msa0370680:CDS 35.0%
!!! GGTCTTGTTTTTATTGCAGA+GGG + chr3_1:68575894-68575913 Msa0370680:CDS 35.0%
AGCCAAGTCTAACTTGATTA+AGG + chr3_1:68575980-68575999 Msa0370680:CDS 35.0%
TTTGCATATCTTCGACATTG+TGG - chr3_1:68576009-68576028 None:intergenic 35.0%
! TCATTCTTTAAGAGTGCATG+AGG - chr3_1:68576039-68576058 None:intergenic 35.0%
! GTTTGAAATCAAAGAGGAAC+GGG + chr3_1:68576159-68576178 Msa0370680:three_prime_UTR 35.0%
!! GTGCTTTGAAAATGAGCAAT+TGG + chr3_1:68576198-68576217 Msa0370680:three_prime_UTR 35.0%
CGGCAAAGGAGAATTGTATA+TGG + chr3_1:68572206-68572225 Msa0370680:CDS 40.0%
TCTCATACTAACTTGAGGGT+TGG - chr3_1:68572236-68572255 None:intergenic 40.0%
TCTCCTACACGTCTATGTAA+GGG - chr3_1:68572322-68572341 None:intergenic 40.0%
TTCTCCTACACGTCTATGTA+AGG - chr3_1:68572323-68572342 None:intergenic 40.0%
ATCTCTAACCGTCTCCTATA+GGG - chr3_1:68572371-68572390 None:intergenic 40.0%
!! GAGAAGGGGTGTTAGTAATT+TGG - chr3_1:68572522-68572541 None:intergenic 40.0%
! ACCCCTTCTCATTTGAAATG+AGG + chr3_1:68572532-68572551 Msa0370680:intron 40.0%
CCCTCATTTCAAATGAGAAG+GGG - chr3_1:68572536-68572555 None:intergenic 40.0%
! CCCCTTCTCATTTGAAATGA+GGG + chr3_1:68572533-68572552 Msa0370680:intron 40.0%
CCCCTCATTTCAAATGAGAA+GGG - chr3_1:68572537-68572556 None:intergenic 40.0%
! CCCTTCTCATTTGAAATGAG+GGG + chr3_1:68572534-68572553 Msa0370680:intron 40.0%
ACCCCTCATTTCAAATGAGA+AGG - chr3_1:68572538-68572557 None:intergenic 40.0%
! CACTTGTTAGCATTTACCTG+AGG - chr3_1:68572622-68572641 None:intergenic 40.0%
!!! GGCTTTAGGCCTCAAAATTT+TGG + chr3_1:68572699-68572718 Msa0370680:intron 40.0%
! TTTTAGACCCCTTAATCCGT+TGG + chr3_1:68572927-68572946 Msa0370680:intron 40.0%
TTTAGACCCCTTAATCCGTT+GGG + chr3_1:68572928-68572947 Msa0370680:intron 40.0%
AGAATTTCCTCAAGTTCGTG+AGG - chr3_1:68573431-68573450 None:intergenic 40.0%
AATCAACGCAATCGGATATC+AGG + chr3_1:68573465-68573484 Msa0370680:CDS 40.0%
! CCAGGGTTTGAAGTTTACAT+TGG - chr3_1:68573653-68573672 None:intergenic 40.0%
CCAATGTAAACTTCAAACCC+TGG + chr3_1:68573650-68573669 Msa0370680:intron 40.0%
CAAGGATGACAAAACTGAGA+TGG - chr3_1:68573685-68573704 None:intergenic 40.0%
ATCATAGTTCTCTGGTGCAA+TGG - chr3_1:68573712-68573731 None:intergenic 40.0%
AAGCTATCCCAAGATTACCA+AGG - chr3_1:68573737-68573756 None:intergenic 40.0%
ATTCATTCCCATGTGACATG+TGG + chr3_1:68573891-68573910 Msa0370680:intron 40.0%
CATTATCACCACATGTCACA+TGG - chr3_1:68573902-68573921 None:intergenic 40.0%
TTAGAACAGGATCTGCTGTA+TGG - chr3_1:68573973-68573992 None:intergenic 40.0%
! CAGTACTGAGGAAAGACATA+TGG - chr3_1:68574100-68574119 None:intergenic 40.0%
AATTGCCTTCAGTGGAGATT+TGG + chr3_1:68574130-68574149 Msa0370680:intron 40.0%
!! GGATTTTTAATTCCAGGTGC+TGG + chr3_1:68574374-68574393 Msa0370680:intron 40.0%
TTAGCTGCAGTTAAAGCAGA+TGG + chr3_1:68574464-68574483 Msa0370680:CDS 40.0%
GGCAAGATTTGCCCAAATAT+GGG - chr3_1:68574498-68574517 None:intergenic 40.0%
AGGCAAGATTTGCCCAAATA+TGG - chr3_1:68574499-68574518 None:intergenic 40.0%
!! GCCTATGCATTTGCTATTAC+TGG + chr3_1:68574515-68574534 Msa0370680:CDS 40.0%
CCCAGTAATAGCAAATGCAT+AGG - chr3_1:68574519-68574538 None:intergenic 40.0%
CCAAAACATCCTCAGAAGAT+GGG - chr3_1:68574818-68574837 None:intergenic 40.0%
TATCGAGCAGACATGCAATT+AGG - chr3_1:68574907-68574926 None:intergenic 40.0%
CTTTATTCGATGGCTAGCAA+CGG - chr3_1:68574932-68574951 None:intergenic 40.0%
TTTCTGCCTCCTTTATTCGA+TGG - chr3_1:68574942-68574961 None:intergenic 40.0%
TTTCTTATAGGTATGTCCCC+AGG + chr3_1:68575186-68575205 Msa0370680:intron 40.0%
! CTTTTTCTACTAGGCCATAG+CGG + chr3_1:68575349-68575368 Msa0370680:intron 40.0%
! CTTTTCTCTCTTGGCTGTAA+TGG + chr3_1:68575520-68575539 Msa0370680:intron 40.0%
AGTTGGCACTTGACAATCAA+AGG - chr3_1:68575579-68575598 None:intergenic 40.0%
TCAAAATGCCGGACTAAAGT+TGG - chr3_1:68575596-68575615 None:intergenic 40.0%
! CCTTTTACGGGAAAAAGACA+TGG - chr3_1:68575628-68575647 None:intergenic 40.0%
! CCATGTCTTTTTCCCGTAAA+AGG + chr3_1:68575625-68575644 Msa0370680:intron 40.0%
! ATACAAACGGGCTTTGTCTT+TGG + chr3_1:68575731-68575750 Msa0370680:CDS 40.0%
GCGATAGAGAATTCCCATAT+TGG - chr3_1:68575787-68575806 None:intergenic 40.0%
!!! GGGTCTTGTTTTTATTGCAG+AGG + chr3_1:68575893-68575912 Msa0370680:CDS 40.0%
ACTCCAATCAGATTCAATGC+TGG + chr3_1:68575953-68575972 Msa0370680:CDS 40.0%
! CATCCAGCATTGAATCTGAT+TGG - chr3_1:68575959-68575978 None:intergenic 40.0%
! CTTTAAGAGTGCATGAGGAA+AGG - chr3_1:68576034-68576053 None:intergenic 40.0%
CGGCAAAGGAGAATTGTATA+TGG + chr3_1:68572206-68572225 Msa0370680:CDS 40.0%
TCTCATACTAACTTGAGGGT+TGG - chr3_1:68572236-68572255 None:intergenic 40.0%
TCTCCTACACGTCTATGTAA+GGG - chr3_1:68572322-68572341 None:intergenic 40.0%
TTCTCCTACACGTCTATGTA+AGG - chr3_1:68572323-68572342 None:intergenic 40.0%
ATCTCTAACCGTCTCCTATA+GGG - chr3_1:68572371-68572390 None:intergenic 40.0%
!! GAGAAGGGGTGTTAGTAATT+TGG - chr3_1:68572522-68572541 None:intergenic 40.0%
! ACCCCTTCTCATTTGAAATG+AGG + chr3_1:68572532-68572551 Msa0370680:intron 40.0%
CCCTCATTTCAAATGAGAAG+GGG - chr3_1:68572536-68572555 None:intergenic 40.0%
! CCCCTTCTCATTTGAAATGA+GGG + chr3_1:68572533-68572552 Msa0370680:intron 40.0%
CCCCTCATTTCAAATGAGAA+GGG - chr3_1:68572537-68572556 None:intergenic 40.0%
! CCCTTCTCATTTGAAATGAG+GGG + chr3_1:68572534-68572553 Msa0370680:intron 40.0%
ACCCCTCATTTCAAATGAGA+AGG - chr3_1:68572538-68572557 None:intergenic 40.0%
! CACTTGTTAGCATTTACCTG+AGG - chr3_1:68572622-68572641 None:intergenic 40.0%
!!! GGCTTTAGGCCTCAAAATTT+TGG + chr3_1:68572699-68572718 Msa0370680:intron 40.0%
! TTTTAGACCCCTTAATCCGT+TGG + chr3_1:68572927-68572946 Msa0370680:intron 40.0%
TTTAGACCCCTTAATCCGTT+GGG + chr3_1:68572928-68572947 Msa0370680:intron 40.0%
AGAATTTCCTCAAGTTCGTG+AGG - chr3_1:68573431-68573450 None:intergenic 40.0%
AATCAACGCAATCGGATATC+AGG + chr3_1:68573465-68573484 Msa0370680:CDS 40.0%
! CCAGGGTTTGAAGTTTACAT+TGG - chr3_1:68573653-68573672 None:intergenic 40.0%
CCAATGTAAACTTCAAACCC+TGG + chr3_1:68573650-68573669 Msa0370680:intron 40.0%
CAAGGATGACAAAACTGAGA+TGG - chr3_1:68573685-68573704 None:intergenic 40.0%
ATCATAGTTCTCTGGTGCAA+TGG - chr3_1:68573712-68573731 None:intergenic 40.0%
AAGCTATCCCAAGATTACCA+AGG - chr3_1:68573737-68573756 None:intergenic 40.0%
ATTCATTCCCATGTGACATG+TGG + chr3_1:68573891-68573910 Msa0370680:intron 40.0%
CATTATCACCACATGTCACA+TGG - chr3_1:68573902-68573921 None:intergenic 40.0%
TTAGAACAGGATCTGCTGTA+TGG - chr3_1:68573973-68573992 None:intergenic 40.0%
! CAGTACTGAGGAAAGACATA+TGG - chr3_1:68574100-68574119 None:intergenic 40.0%
AATTGCCTTCAGTGGAGATT+TGG + chr3_1:68574130-68574149 Msa0370680:intron 40.0%
!! GGATTTTTAATTCCAGGTGC+TGG + chr3_1:68574374-68574393 Msa0370680:intron 40.0%
TTAGCTGCAGTTAAAGCAGA+TGG + chr3_1:68574464-68574483 Msa0370680:CDS 40.0%
GGCAAGATTTGCCCAAATAT+GGG - chr3_1:68574498-68574517 None:intergenic 40.0%
AGGCAAGATTTGCCCAAATA+TGG - chr3_1:68574499-68574518 None:intergenic 40.0%
!! GCCTATGCATTTGCTATTAC+TGG + chr3_1:68574515-68574534 Msa0370680:CDS 40.0%
CCCAGTAATAGCAAATGCAT+AGG - chr3_1:68574519-68574538 None:intergenic 40.0%
CCAAAACATCCTCAGAAGAT+GGG - chr3_1:68574818-68574837 None:intergenic 40.0%
TATCGAGCAGACATGCAATT+AGG - chr3_1:68574907-68574926 None:intergenic 40.0%
CTTTATTCGATGGCTAGCAA+CGG - chr3_1:68574932-68574951 None:intergenic 40.0%
TTTCTGCCTCCTTTATTCGA+TGG - chr3_1:68574942-68574961 None:intergenic 40.0%
TTTCTTATAGGTATGTCCCC+AGG + chr3_1:68575186-68575205 Msa0370680:intron 40.0%
! CTTTTTCTACTAGGCCATAG+CGG + chr3_1:68575349-68575368 Msa0370680:intron 40.0%
! CTTTTCTCTCTTGGCTGTAA+TGG + chr3_1:68575520-68575539 Msa0370680:intron 40.0%
AGTTGGCACTTGACAATCAA+AGG - chr3_1:68575579-68575598 None:intergenic 40.0%
TCAAAATGCCGGACTAAAGT+TGG - chr3_1:68575596-68575615 None:intergenic 40.0%
! CCTTTTACGGGAAAAAGACA+TGG - chr3_1:68575628-68575647 None:intergenic 40.0%
! CCATGTCTTTTTCCCGTAAA+AGG + chr3_1:68575625-68575644 Msa0370680:intron 40.0%
! ATACAAACGGGCTTTGTCTT+TGG + chr3_1:68575731-68575750 Msa0370680:CDS 40.0%
GCGATAGAGAATTCCCATAT+TGG - chr3_1:68575787-68575806 None:intergenic 40.0%
!!! GGGTCTTGTTTTTATTGCAG+AGG + chr3_1:68575893-68575912 Msa0370680:CDS 40.0%
ACTCCAATCAGATTCAATGC+TGG + chr3_1:68575953-68575972 Msa0370680:CDS 40.0%
! CATCCAGCATTGAATCTGAT+TGG - chr3_1:68575959-68575978 None:intergenic 40.0%
! CTTTAAGAGTGCATGAGGAA+AGG - chr3_1:68576034-68576053 None:intergenic 40.0%
TCACCCTTACATAGACGTGT+AGG + chr3_1:68572316-68572335 Msa0370680:intron 45.0%
!! TATAGGGGCGTCACATTTCA+TGG - chr3_1:68572355-68572374 None:intergenic 45.0%
ATGAAATGTGACGCCCCTAT+AGG + chr3_1:68572354-68572373 Msa0370680:intron 45.0%
TCTCTAACCGTCTCCTATAG+GGG - chr3_1:68572370-68572389 None:intergenic 45.0%
CATCTCTAACCGTCTCCTAT+AGG - chr3_1:68572372-68572391 None:intergenic 45.0%
CTATAGGAGACGGTTAGAGA+TGG + chr3_1:68572370-68572389 Msa0370680:intron 45.0%
TATGCACCTTCGTCGTGTTT+GGG + chr3_1:68572452-68572471 Msa0370680:intron 45.0%
!! TCGACTTATTGGCTCTTAGC+CGG + chr3_1:68572477-68572496 Msa0370680:intron 45.0%
AATTTGACCGTGTTACGGAC+CGG - chr3_1:68572499-68572518 None:intergenic 45.0%
ACTTGAACCTCACGAACTTG+AGG + chr3_1:68573421-68573440 Msa0370680:CDS 45.0%
GCAGCTGTATGGAATACACT+GGG + chr3_1:68573491-68573510 Msa0370680:CDS 45.0%
! TGTGAGAGCTTTCAAGTGTG+TGG - chr3_1:68573573-68573592 None:intergenic 45.0%
CCAAGGCAATCATAGTTCTC+TGG - chr3_1:68573720-68573739 None:intergenic 45.0%
CCAGAGAACTATGATTGCCT+TGG + chr3_1:68573717-68573736 Msa0370680:CDS 45.0%
ATCTGCTGTATGGTGCATTG+CGG - chr3_1:68573963-68573982 None:intergenic 45.0%
TCAAAACCATCCTGCAGCTT+TGG + chr3_1:68574193-68574212 Msa0370680:CDS 45.0%
AATTGACCAAAGCTGCAGGA+TGG - chr3_1:68574202-68574221 None:intergenic 45.0%
GCATAATTGACCAAAGCTGC+AGG - chr3_1:68574206-68574225 None:intergenic 45.0%
TGCTTCAGCAGAACAATCCA+TGG + chr3_1:68574415-68574434 Msa0370680:CDS 45.0%
CTTAGCAACATTAGCAGCCA+TGG - chr3_1:68574435-68574454 None:intergenic 45.0%
CATGGCTGCTAATGTTGCTA+AGG + chr3_1:68574433-68574452 Msa0370680:CDS 45.0%
TCGAATTTCCAGCAAGTGCT+TGG + chr3_1:68574544-68574563 Msa0370680:CDS 45.0%
TTCCAGCAAGTGCTTGGAAA+AGG + chr3_1:68574550-68574569 Msa0370680:CDS 45.0%
!! GAGGTTGTTCATTGGTTTCC+TGG + chr3_1:68574615-68574634 Msa0370680:intron 45.0%
! ATTGGTTTCCTGGTCCTTGT+TGG + chr3_1:68574625-68574644 Msa0370680:intron 45.0%
!! CCCATCTTCTGAGGATGTTT+TGG + chr3_1:68574815-68574834 Msa0370680:intron 45.0%
GCCAAAACATCCTCAGAAGA+TGG - chr3_1:68574819-68574838 None:intergenic 45.0%
! TTTTCCTTCCCTTTGTTGCC+AGG + chr3_1:68574867-68574886 Msa0370680:intron 45.0%
! TTTTGCTGCCTGGCAACAAA+GGG - chr3_1:68574878-68574897 None:intergenic 45.0%
CGTTGCTAGCCATCGAATAA+AGG + chr3_1:68574930-68574949 Msa0370680:CDS 45.0%
TGCTAGCCATCGAATAAAGG+AGG + chr3_1:68574933-68574952 Msa0370680:CDS 45.0%
GCAGACGAAAGCAATTCACT+AGG - chr3_1:68574976-68574995 None:intergenic 45.0%
AGTGAATTGCTTTCGTCTGC+TGG + chr3_1:68574976-68574995 Msa0370680:CDS 45.0%
TTCGTCTGCTGGAAATGAGA+TGG + chr3_1:68574987-68575006 Msa0370680:CDS 45.0%
AAGAGATGGTGATTCATCCC+TGG + chr3_1:68575020-68575039 Msa0370680:CDS 45.0%
AGCTATTGGAAGCTCAACCA+GGG - chr3_1:68575040-68575059 None:intergenic 45.0%
AAGCTATTGGAAGCTCAACC+AGG - chr3_1:68575041-68575060 None:intergenic 45.0%
TGGTTGAGCTTCCAATAGCT+TGG + chr3_1:68575040-68575059 Msa0370680:CDS 45.0%
GGTTGAGCTTCCAATAGCTT+GGG + chr3_1:68575041-68575060 Msa0370680:CDS 45.0%
ATATCTCATGCTGAGCCTTG+TGG - chr3_1:68575083-68575102 None:intergenic 45.0%
AGCAGCATACGAAAGTGAAC+AGG + chr3_1:68575104-68575123 Msa0370680:CDS 45.0%
GCATACGAAAGTGAACAGGA+CGG + chr3_1:68575108-68575127 Msa0370680:CDS 45.0%
CATACGAAAGTGAACAGGAC+GGG + chr3_1:68575109-68575128 Msa0370680:CDS 45.0%
ATCATCTGGATCTTCCGCTA+TGG - chr3_1:68575366-68575385 None:intergenic 45.0%
ATCCAGATGATGCAGTTCAG+TGG + chr3_1:68575375-68575394 Msa0370680:CDS 45.0%
AAAGACTGTGAAGGCCAAGT+TGG - chr3_1:68575403-68575422 None:intergenic 45.0%
AGCTATGCATGGTCTAACCT+CGG + chr3_1:68575488-68575507 Msa0370680:CDS 45.0%
! GAGAAAAGAAGCACATACCG+AGG - chr3_1:68575508-68575527 None:intergenic 45.0%
GTCAAGTGCCAACTTTAGTC+CGG + chr3_1:68575585-68575604 Msa0370680:intron 45.0%
CGGGAAAAAGACATGGAAGA+GGG - chr3_1:68575621-68575640 None:intergenic 45.0%
ACGGGAAAAAGACATGGAAG+AGG - chr3_1:68575622-68575641 None:intergenic 45.0%
AAGTCACTTGAACTTCAGCC+TGG + chr3_1:68575846-68575865 Msa0370680:CDS 45.0%
! TTGAATGCAGGAGCATATCC+AGG - chr3_1:68575867-68575886 None:intergenic 45.0%
TGCTCCTGCATTCAACAATC+TGG + chr3_1:68575872-68575891 Msa0370680:CDS 45.0%
GCTCCTGCATTCAACAATCT+GGG + chr3_1:68575873-68575892 Msa0370680:CDS 45.0%
AGACCCAGATTGTTGAATGC+AGG - chr3_1:68575879-68575898 None:intergenic 45.0%
ATGAAGGAACGGCAGAAGAA+AGG - chr3_1:68576076-68576095 None:intergenic 45.0%
TCACCCTTACATAGACGTGT+AGG + chr3_1:68572316-68572335 Msa0370680:intron 45.0%
!! TATAGGGGCGTCACATTTCA+TGG - chr3_1:68572355-68572374 None:intergenic 45.0%
ATGAAATGTGACGCCCCTAT+AGG + chr3_1:68572354-68572373 Msa0370680:intron 45.0%
TCTCTAACCGTCTCCTATAG+GGG - chr3_1:68572370-68572389 None:intergenic 45.0%
CATCTCTAACCGTCTCCTAT+AGG - chr3_1:68572372-68572391 None:intergenic 45.0%
CTATAGGAGACGGTTAGAGA+TGG + chr3_1:68572370-68572389 Msa0370680:intron 45.0%
TATGCACCTTCGTCGTGTTT+GGG + chr3_1:68572452-68572471 Msa0370680:intron 45.0%
!! TCGACTTATTGGCTCTTAGC+CGG + chr3_1:68572477-68572496 Msa0370680:intron 45.0%
AATTTGACCGTGTTACGGAC+CGG - chr3_1:68572499-68572518 None:intergenic 45.0%
ACTTGAACCTCACGAACTTG+AGG + chr3_1:68573421-68573440 Msa0370680:CDS 45.0%
GCAGCTGTATGGAATACACT+GGG + chr3_1:68573491-68573510 Msa0370680:CDS 45.0%
! TGTGAGAGCTTTCAAGTGTG+TGG - chr3_1:68573573-68573592 None:intergenic 45.0%
CCAAGGCAATCATAGTTCTC+TGG - chr3_1:68573720-68573739 None:intergenic 45.0%
CCAGAGAACTATGATTGCCT+TGG + chr3_1:68573717-68573736 Msa0370680:CDS 45.0%
ATCTGCTGTATGGTGCATTG+CGG - chr3_1:68573963-68573982 None:intergenic 45.0%
TCAAAACCATCCTGCAGCTT+TGG + chr3_1:68574193-68574212 Msa0370680:CDS 45.0%
AATTGACCAAAGCTGCAGGA+TGG - chr3_1:68574202-68574221 None:intergenic 45.0%
GCATAATTGACCAAAGCTGC+AGG - chr3_1:68574206-68574225 None:intergenic 45.0%
TGCTTCAGCAGAACAATCCA+TGG + chr3_1:68574415-68574434 Msa0370680:CDS 45.0%
CTTAGCAACATTAGCAGCCA+TGG - chr3_1:68574435-68574454 None:intergenic 45.0%
CATGGCTGCTAATGTTGCTA+AGG + chr3_1:68574433-68574452 Msa0370680:CDS 45.0%
TCGAATTTCCAGCAAGTGCT+TGG + chr3_1:68574544-68574563 Msa0370680:CDS 45.0%
TTCCAGCAAGTGCTTGGAAA+AGG + chr3_1:68574550-68574569 Msa0370680:CDS 45.0%
!! GAGGTTGTTCATTGGTTTCC+TGG + chr3_1:68574615-68574634 Msa0370680:intron 45.0%
! ATTGGTTTCCTGGTCCTTGT+TGG + chr3_1:68574625-68574644 Msa0370680:intron 45.0%
!! CCCATCTTCTGAGGATGTTT+TGG + chr3_1:68574815-68574834 Msa0370680:intron 45.0%
GCCAAAACATCCTCAGAAGA+TGG - chr3_1:68574819-68574838 None:intergenic 45.0%
! TTTTCCTTCCCTTTGTTGCC+AGG + chr3_1:68574867-68574886 Msa0370680:intron 45.0%
! TTTTGCTGCCTGGCAACAAA+GGG - chr3_1:68574878-68574897 None:intergenic 45.0%
CGTTGCTAGCCATCGAATAA+AGG + chr3_1:68574930-68574949 Msa0370680:CDS 45.0%
TGCTAGCCATCGAATAAAGG+AGG + chr3_1:68574933-68574952 Msa0370680:CDS 45.0%
GCAGACGAAAGCAATTCACT+AGG - chr3_1:68574976-68574995 None:intergenic 45.0%
AGTGAATTGCTTTCGTCTGC+TGG + chr3_1:68574976-68574995 Msa0370680:CDS 45.0%
TTCGTCTGCTGGAAATGAGA+TGG + chr3_1:68574987-68575006 Msa0370680:CDS 45.0%
AAGAGATGGTGATTCATCCC+TGG + chr3_1:68575020-68575039 Msa0370680:CDS 45.0%
AGCTATTGGAAGCTCAACCA+GGG - chr3_1:68575040-68575059 None:intergenic 45.0%
AAGCTATTGGAAGCTCAACC+AGG - chr3_1:68575041-68575060 None:intergenic 45.0%
TGGTTGAGCTTCCAATAGCT+TGG + chr3_1:68575040-68575059 Msa0370680:CDS 45.0%
GGTTGAGCTTCCAATAGCTT+GGG + chr3_1:68575041-68575060 Msa0370680:CDS 45.0%
ATATCTCATGCTGAGCCTTG+TGG - chr3_1:68575083-68575102 None:intergenic 45.0%
AGCAGCATACGAAAGTGAAC+AGG + chr3_1:68575104-68575123 Msa0370680:CDS 45.0%
GCATACGAAAGTGAACAGGA+CGG + chr3_1:68575108-68575127 Msa0370680:CDS 45.0%
CATACGAAAGTGAACAGGAC+GGG + chr3_1:68575109-68575128 Msa0370680:CDS 45.0%
ATCATCTGGATCTTCCGCTA+TGG - chr3_1:68575366-68575385 None:intergenic 45.0%
ATCCAGATGATGCAGTTCAG+TGG + chr3_1:68575375-68575394 Msa0370680:CDS 45.0%
AAAGACTGTGAAGGCCAAGT+TGG - chr3_1:68575403-68575422 None:intergenic 45.0%
AGCTATGCATGGTCTAACCT+CGG + chr3_1:68575488-68575507 Msa0370680:CDS 45.0%
! GAGAAAAGAAGCACATACCG+AGG - chr3_1:68575508-68575527 None:intergenic 45.0%
GTCAAGTGCCAACTTTAGTC+CGG + chr3_1:68575585-68575604 Msa0370680:intron 45.0%
CGGGAAAAAGACATGGAAGA+GGG - chr3_1:68575621-68575640 None:intergenic 45.0%
ACGGGAAAAAGACATGGAAG+AGG - chr3_1:68575622-68575641 None:intergenic 45.0%
AAGTCACTTGAACTTCAGCC+TGG + chr3_1:68575846-68575865 Msa0370680:CDS 45.0%
! TTGAATGCAGGAGCATATCC+AGG - chr3_1:68575867-68575886 None:intergenic 45.0%
TGCTCCTGCATTCAACAATC+TGG + chr3_1:68575872-68575891 Msa0370680:CDS 45.0%
GCTCCTGCATTCAACAATCT+GGG + chr3_1:68575873-68575892 Msa0370680:CDS 45.0%
AGACCCAGATTGTTGAATGC+AGG - chr3_1:68575879-68575898 None:intergenic 45.0%
ATGAAGGAACGGCAGAAGAA+AGG - chr3_1:68576076-68576095 None:intergenic 45.0%
TCTGGGTCTATCTGAGCTGT+TGG - chr3_1:68572398-68572417 None:intergenic 50.0%
ATCTAGTGCGGTGTTCCACA+CGG + chr3_1:68572422-68572441 Msa0370680:intron 50.0%
GGTGCATACTAAACTCCGTG+TGG - chr3_1:68572440-68572459 None:intergenic 50.0%
GTATGCACCTTCGTCGTGTT+TGG + chr3_1:68572451-68572470 Msa0370680:intron 50.0%
GTGTTTGGGCCTCGACTTAT+TGG + chr3_1:68572466-68572485 Msa0370680:intron 50.0%
GGCTAAGAGCCAATAAGTCG+AGG - chr3_1:68572478-68572497 None:intergenic 50.0%
! AGCCCTTGCTTGAGTTGCTT+GGG - chr3_1:68572683-68572702 None:intergenic 50.0%
! AAGCCCTTGCTTGAGTTGCT+TGG - chr3_1:68572684-68572703 None:intergenic 50.0%
GCAACTCAAGCAAGGGCTTT+AGG + chr3_1:68572685-68572704 Msa0370680:intron 50.0%
AACGCAATCGGATATCAGGC+AGG + chr3_1:68573469-68573488 Msa0370680:CDS 50.0%
ATATCAGGCAGGCAGCTGTA+TGG + chr3_1:68573480-68573499 Msa0370680:CDS 50.0%
GGCAGCTGTATGGAATACAC+TGG + chr3_1:68573490-68573509 Msa0370680:CDS 50.0%
!!! GCACACGGCCAGTTTTAAGA+AGG - chr3_1:68573523-68573542 None:intergenic 50.0%
TCTTAAAACTGGCCGTGTGC+AGG + chr3_1:68573523-68573542 Msa0370680:CDS 50.0%
AAGGTGCATGTACCTGCACA+CGG - chr3_1:68573538-68573557 None:intergenic 50.0%
TGAGATGGCACTCTACACCA+GGG - chr3_1:68573670-68573689 None:intergenic 50.0%
CTCTGGTGCAATGGCTAACA+AGG - chr3_1:68573703-68573722 None:intergenic 50.0%
TCTGCTGTATGGTGCATTGC+GGG - chr3_1:68573962-68573981 None:intergenic 50.0%
! CACCTTTTCCAAGCACTTGC+TGG - chr3_1:68574555-68574574 None:intergenic 50.0%
!! GTGCTTGGAAAAGGTGCTCA+TGG + chr3_1:68574559-68574578 Msa0370680:intron 50.0%
CATTTCCACCAACAAGGACC+AGG - chr3_1:68574636-68574655 None:intergenic 50.0%
! GTTTTGCTGCCTGGCAACAA+AGG - chr3_1:68574879-68574898 None:intergenic 50.0%
TTGTTGCCAGGCAGCAAAAC+TGG + chr3_1:68574879-68574898 Msa0370680:intron 50.0%
! TAGGTTCCAGTTTTGCTGCC+TGG - chr3_1:68574888-68574907 None:intergenic 50.0%
!! TGCTGTTTCCAGCCTAAAGC+AGG + chr3_1:68575152-68575171 Msa0370680:CDS 50.0%
ATAGGTATGTCCCCAGGTTG+AGG + chr3_1:68575192-68575211 Msa0370680:intron 50.0%
TTCCATCTGCACCTCAACCT+GGG - chr3_1:68575206-68575225 None:intergenic 50.0%
TTTCCATCTGCACCTCAACC+TGG - chr3_1:68575207-68575226 None:intergenic 50.0%
TGCCACTGAACTGCATCATC+TGG - chr3_1:68575380-68575399 None:intergenic 50.0%
CCTTCACAGTCTTTGTGCCA+GGG + chr3_1:68575409-68575428 Msa0370680:CDS 50.0%
ATAGCTGCAACCCTTGTCAC+AGG - chr3_1:68575474-68575493 None:intergenic 50.0%
ACAAGGGTTGCAGCTATGCA+TGG + chr3_1:68575477-68575496 Msa0370680:CDS 50.0%
GGAAGAGGGAGTCAAAATGC+CGG - chr3_1:68575607-68575626 None:intergenic 50.0%
TGCAGAGGGTCTGTTAGAAG+AGG + chr3_1:68575908-68575927 Msa0370680:CDS 50.0%
TCTGGGTCTATCTGAGCTGT+TGG - chr3_1:68572398-68572417 None:intergenic 50.0%
ATCTAGTGCGGTGTTCCACA+CGG + chr3_1:68572422-68572441 Msa0370680:intron 50.0%
GGTGCATACTAAACTCCGTG+TGG - chr3_1:68572440-68572459 None:intergenic 50.0%
GTATGCACCTTCGTCGTGTT+TGG + chr3_1:68572451-68572470 Msa0370680:intron 50.0%
GTGTTTGGGCCTCGACTTAT+TGG + chr3_1:68572466-68572485 Msa0370680:intron 50.0%
GGCTAAGAGCCAATAAGTCG+AGG - chr3_1:68572478-68572497 None:intergenic 50.0%
! AGCCCTTGCTTGAGTTGCTT+GGG - chr3_1:68572683-68572702 None:intergenic 50.0%
! AAGCCCTTGCTTGAGTTGCT+TGG - chr3_1:68572684-68572703 None:intergenic 50.0%
GCAACTCAAGCAAGGGCTTT+AGG + chr3_1:68572685-68572704 Msa0370680:intron 50.0%
AACGCAATCGGATATCAGGC+AGG + chr3_1:68573469-68573488 Msa0370680:CDS 50.0%
ATATCAGGCAGGCAGCTGTA+TGG + chr3_1:68573480-68573499 Msa0370680:CDS 50.0%
GGCAGCTGTATGGAATACAC+TGG + chr3_1:68573490-68573509 Msa0370680:CDS 50.0%
!!! GCACACGGCCAGTTTTAAGA+AGG - chr3_1:68573523-68573542 None:intergenic 50.0%
TCTTAAAACTGGCCGTGTGC+AGG + chr3_1:68573523-68573542 Msa0370680:CDS 50.0%
AAGGTGCATGTACCTGCACA+CGG - chr3_1:68573538-68573557 None:intergenic 50.0%
TGAGATGGCACTCTACACCA+GGG - chr3_1:68573670-68573689 None:intergenic 50.0%
CTCTGGTGCAATGGCTAACA+AGG - chr3_1:68573703-68573722 None:intergenic 50.0%
TCTGCTGTATGGTGCATTGC+GGG - chr3_1:68573962-68573981 None:intergenic 50.0%
! CACCTTTTCCAAGCACTTGC+TGG - chr3_1:68574555-68574574 None:intergenic 50.0%
!! GTGCTTGGAAAAGGTGCTCA+TGG + chr3_1:68574559-68574578 Msa0370680:intron 50.0%
CATTTCCACCAACAAGGACC+AGG - chr3_1:68574636-68574655 None:intergenic 50.0%
! GTTTTGCTGCCTGGCAACAA+AGG - chr3_1:68574879-68574898 None:intergenic 50.0%
TTGTTGCCAGGCAGCAAAAC+TGG + chr3_1:68574879-68574898 Msa0370680:intron 50.0%
! TAGGTTCCAGTTTTGCTGCC+TGG - chr3_1:68574888-68574907 None:intergenic 50.0%
!! TGCTGTTTCCAGCCTAAAGC+AGG + chr3_1:68575152-68575171 Msa0370680:CDS 50.0%
ATAGGTATGTCCCCAGGTTG+AGG + chr3_1:68575192-68575211 Msa0370680:intron 50.0%
TTCCATCTGCACCTCAACCT+GGG - chr3_1:68575206-68575225 None:intergenic 50.0%
TTTCCATCTGCACCTCAACC+TGG - chr3_1:68575207-68575226 None:intergenic 50.0%
TGCCACTGAACTGCATCATC+TGG - chr3_1:68575380-68575399 None:intergenic 50.0%
CCTTCACAGTCTTTGTGCCA+GGG + chr3_1:68575409-68575428 Msa0370680:CDS 50.0%
ATAGCTGCAACCCTTGTCAC+AGG - chr3_1:68575474-68575493 None:intergenic 50.0%
ACAAGGGTTGCAGCTATGCA+TGG + chr3_1:68575477-68575496 Msa0370680:CDS 50.0%
GGAAGAGGGAGTCAAAATGC+CGG - chr3_1:68575607-68575626 None:intergenic 50.0%
TGCAGAGGGTCTGTTAGAAG+AGG + chr3_1:68575908-68575927 Msa0370680:CDS 50.0%
GTGACATTGCGTCACCTCCA+AGG - chr3_1:68572300-68572319 None:intergenic 55.0%
TGTGACGCCCCTATAGGAGA+CGG + chr3_1:68572360-68572379 Msa0370680:intron 55.0%
GACCCAGACGTGATCTAGTG+CGG + chr3_1:68572410-68572429 Msa0370680:intron 55.0%
CACCGCACTAGATCACGTCT+GGG - chr3_1:68572415-68572434 None:intergenic 55.0%
ACACCGCACTAGATCACGTC+TGG - chr3_1:68572416-68572435 None:intergenic 55.0%
CTCTTAGCCGGTCCGTAACA+CGG + chr3_1:68572489-68572508 Msa0370680:intron 55.0%
! CTTGCTTGAGTTGCTTGGGC+CGG - chr3_1:68572679-68572698 None:intergenic 55.0%
GGCCCAAGCAACTCAAGCAA+GGG + chr3_1:68572678-68572697 Msa0370680:intron 55.0%
CGTTAATAGAGCCGGCCCAA+CGG - chr3_1:68572946-68572965 None:intergenic 55.0%
CTGAGATGGCACTCTACACC+AGG - chr3_1:68573671-68573690 None:intergenic 55.0%
GGTTTCCTGGTCCTTGTTGG+TGG + chr3_1:68574628-68574647 Msa0370680:intron 55.0%
GAGCTTCCAATAGCTTGGGC+CGG + chr3_1:68575045-68575064 Msa0370680:CDS 55.0%
AGCTTCCAATAGCTTGGGCC+GGG + chr3_1:68575046-68575065 Msa0370680:CDS 55.0%
CTTGTGGACCATTGCAAGCC+CGG - chr3_1:68575067-68575086 None:intergenic 55.0%
!! AAGTGAACAGGACGGGCTGA+AGG + chr3_1:68575116-68575135 Msa0370680:CDS 55.0%
TCCATCTGCACCTCAACCTG+GGG - chr3_1:68575205-68575224 None:intergenic 55.0%
GCAGTTCAGTGGCACCAACT+TGG + chr3_1:68575386-68575405 Msa0370680:CDS 55.0%
GCCTTCACAGTCTTTGTGCC+AGG + chr3_1:68575408-68575427 Msa0370680:CDS 55.0%
CCCTGGCACAAAGACTGTGA+AGG - chr3_1:68575412-68575431 None:intergenic 55.0%
CACAGGCAACAGCAGCTTTG+AGG - chr3_1:68575457-68575476 None:intergenic 55.0%
AGCTGCTGTTGCCTGTGACA+AGG + chr3_1:68575460-68575479 Msa0370680:CDS 55.0%
GCTGCTGTTGCCTGTGACAA+GGG + chr3_1:68575461-68575480 Msa0370680:CDS 55.0%
GTGACATTGCGTCACCTCCA+AGG - chr3_1:68572300-68572319 None:intergenic 55.0%
TGTGACGCCCCTATAGGAGA+CGG + chr3_1:68572360-68572379 Msa0370680:intron 55.0%
GACCCAGACGTGATCTAGTG+CGG + chr3_1:68572410-68572429 Msa0370680:intron 55.0%
CACCGCACTAGATCACGTCT+GGG - chr3_1:68572415-68572434 None:intergenic 55.0%
ACACCGCACTAGATCACGTC+TGG - chr3_1:68572416-68572435 None:intergenic 55.0%
CTCTTAGCCGGTCCGTAACA+CGG + chr3_1:68572489-68572508 Msa0370680:intron 55.0%
! CTTGCTTGAGTTGCTTGGGC+CGG - chr3_1:68572679-68572698 None:intergenic 55.0%
GGCCCAAGCAACTCAAGCAA+GGG + chr3_1:68572678-68572697 Msa0370680:intron 55.0%
CGTTAATAGAGCCGGCCCAA+CGG - chr3_1:68572946-68572965 None:intergenic 55.0%
CTGAGATGGCACTCTACACC+AGG - chr3_1:68573671-68573690 None:intergenic 55.0%
GGTTTCCTGGTCCTTGTTGG+TGG + chr3_1:68574628-68574647 Msa0370680:intron 55.0%
GAGCTTCCAATAGCTTGGGC+CGG + chr3_1:68575045-68575064 Msa0370680:CDS 55.0%
AGCTTCCAATAGCTTGGGCC+GGG + chr3_1:68575046-68575065 Msa0370680:CDS 55.0%
CTTGTGGACCATTGCAAGCC+CGG - chr3_1:68575067-68575086 None:intergenic 55.0%
!! AAGTGAACAGGACGGGCTGA+AGG + chr3_1:68575116-68575135 Msa0370680:CDS 55.0%
TCCATCTGCACCTCAACCTG+GGG - chr3_1:68575205-68575224 None:intergenic 55.0%
GCAGTTCAGTGGCACCAACT+TGG + chr3_1:68575386-68575405 Msa0370680:CDS 55.0%
GCCTTCACAGTCTTTGTGCC+AGG + chr3_1:68575408-68575427 Msa0370680:CDS 55.0%
CCCTGGCACAAAGACTGTGA+AGG - chr3_1:68575412-68575431 None:intergenic 55.0%
CACAGGCAACAGCAGCTTTG+AGG - chr3_1:68575457-68575476 None:intergenic 55.0%
AGCTGCTGTTGCCTGTGACA+AGG + chr3_1:68575460-68575479 Msa0370680:CDS 55.0%
GCTGCTGTTGCCTGTGACAA+GGG + chr3_1:68575461-68575480 Msa0370680:CDS 55.0%
TCGAGGCCCAAACACGACGA+AGG - chr3_1:68572461-68572480 None:intergenic 60.0%
CGGCCCAAGCAACTCAAGCA+AGG + chr3_1:68572677-68572696 Msa0370680:intron 60.0%
GACCCCTTAATCCGTTGGGC+CGG + chr3_1:68572932-68572951 Msa0370680:intron 60.0%
!! AGCCGGCCCAACGGATTAAG+GGG - chr3_1:68572937-68572956 None:intergenic 60.0%
!! GAGCCGGCCCAACGGATTAA+GGG - chr3_1:68572938-68572957 None:intergenic 60.0%
!! AGAGCCGGCCCAACGGATTA+AGG - chr3_1:68572939-68572958 None:intergenic 60.0%
GCAGCATTTGCACCAGCACC+TGG - chr3_1:68574389-68574408 None:intergenic 60.0%
GCTGCCTGGCAACAAAGGGA+AGG - chr3_1:68574874-68574893 None:intergenic 60.0%
CGGGCTTGCAATGGTCCACA+AGG + chr3_1:68575065-68575084 Msa0370680:CDS 60.0%
! TCCCCAGGTTGAGGTGCAGA+TGG + chr3_1:68575201-68575220 Msa0370680:intron 60.0%
TCGAGGCCCAAACACGACGA+AGG - chr3_1:68572461-68572480 None:intergenic 60.0%
CGGCCCAAGCAACTCAAGCA+AGG + chr3_1:68572677-68572696 Msa0370680:intron 60.0%
GACCCCTTAATCCGTTGGGC+CGG + chr3_1:68572932-68572951 Msa0370680:intron 60.0%
!! AGCCGGCCCAACGGATTAAG+GGG - chr3_1:68572937-68572956 None:intergenic 60.0%
!! GAGCCGGCCCAACGGATTAA+GGG - chr3_1:68572938-68572957 None:intergenic 60.0%
!! AGAGCCGGCCCAACGGATTA+AGG - chr3_1:68572939-68572958 None:intergenic 60.0%
GCAGCATTTGCACCAGCACC+TGG - chr3_1:68574389-68574408 None:intergenic 60.0%
GCTGCCTGGCAACAAAGGGA+AGG - chr3_1:68574874-68574893 None:intergenic 60.0%
CGGGCTTGCAATGGTCCACA+AGG + chr3_1:68575065-68575084 Msa0370680:CDS 60.0%
! TCCCCAGGTTGAGGTGCAGA+TGG + chr3_1:68575201-68575220 Msa0370680:intron 60.0%
GCAAGCCCGGCCCAAGCTAT+TGG - chr3_1:68575054-68575073 None:intergenic 65.0%
AGCTTGGGCCGGGCTTGCAA+TGG + chr3_1:68575056-68575075 Msa0370680:CDS 65.0%
GCAAGCCCGGCCCAAGCTAT+TGG - chr3_1:68575054-68575073 None:intergenic 65.0%
AGCTTGGGCCGGGCTTGCAA+TGG + chr3_1:68575056-68575075 Msa0370680:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 68572196 68576297 68572196 ID=Msa0370680;Name=Msa0370680
chr3_1 mRNA 68572196 68576297 68572196 ID=Msa0370680-mRNA-1;Parent=Msa0370680;Name=Msa0370680-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.85|0.75|0.87|1|1|8|239|471
chr3_1 exon 68572196 68572243 68572196 ID=Msa0370680-mRNA-1:exon:14388;Parent=Msa0370680-mRNA-1
chr3_1 exon 68573377 68573544 68573377 ID=Msa0370680-mRNA-1:exon:14389;Parent=Msa0370680-mRNA-1
chr3_1 exon 68573678 68573766 68573678 ID=Msa0370680-mRNA-1:exon:14390;Parent=Msa0370680-mRNA-1
chr3_1 exon 68574142 68574263 68574142 ID=Msa0370680-mRNA-1:exon:14391;Parent=Msa0370680-mRNA-1
chr3_1 exon 68574390 68574571 68574390 ID=Msa0370680-mRNA-1:exon:14392;Parent=Msa0370680-mRNA-1
chr3_1 exon 68574889 68575173 68574889 ID=Msa0370680-mRNA-1:exon:14393;Parent=Msa0370680-mRNA-1
chr3_1 exon 68575362 68575509 68575362 ID=Msa0370680-mRNA-1:exon:14394;Parent=Msa0370680-mRNA-1
chr3_1 exon 68575685 68576297 68575685 ID=Msa0370680-mRNA-1:exon:14395;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68572196 68572243 68572196 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68573377 68573544 68573377 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68573678 68573766 68573678 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68574142 68574263 68574142 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68574390 68574571 68574390 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68574889 68575173 68574889 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68575362 68575509 68575362 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 CDS 68575685 68576058 68575685 ID=Msa0370680-mRNA-1:cds;Parent=Msa0370680-mRNA-1
chr3_1 three_prime_UTR 68576059 68576297 68576059 ID=Msa0370680-mRNA-1:three_prime_utr;Parent=Msa0370680-mRNA-1
Gene Sequence

>Msa0370680

ATGGTCTTCACGGCAAAGGAGAATTGTATATGGCACTCCAACCCTCAATGCCTGATAATAGAAAGTTCATCAGAAAATAGTTCAGACAAAGAACTTGAACCTCACGAACTTGAGGAAATTCTTTCTAAACTGAAAGAATCAACGCAATCGGATATCAGGCAGGCAGCTGTATGGAATACACTGGGTTTTATCCTTCTTAAAACTGGCCGTGTGCAGAGTGCCATCTCAGTTTTGTCATCCTTGTTAGCCATTGCACCAGAGAACTATGATTGCCTTGGTAATCTTGGGATAGCTTACCTTCAAATTGGAGATTTGGAATTATCTGCGAAGTGTTTCCAAGAGTTGATCCTAAAAGATCAAAACCATCCTGCAGCTTTGGTCAATTATGCTGCTCTCCTTTTGTGTAAAAATGCTTCAGTTGTAGCAGGTGCTGGTGCAAATGCTGCTGATGATGCTTCAGCAGAACAATCCATGGCTGCTAATGTTGCTAAGGAATGTTTGTTAGCTGCAGTTAAAGCAGATGGAAAATCAGCCCATATTTGGGCAAATCTTGCCTATGCATTTGCTATTACTGGGAATCATCGAATTTCCAGCAAGTGCTTGGAAAAGGCAGCAAAACTGGAACCTAATTGCATGTCTGCTCGATATGCCGTTGCTAGCCATCGAATAAAGGAGGCAGAAAGATCTCAAGATCCTAGTGAATTGCTTTCGTCTGCTGGAAATGAGATGGCTTCCATAATAAGAGATGGTGATTCATCCCTGGTTGAGCTTCCAATAGCTTGGGCCGGGCTTGCAATGGTCCACAAGGCTCAGCATGAGATATCAGCAGCATACGAAAGTGAACAGGACGGGCTGAAGGAAATTGAAGAACGTGCTGTTTCCAGCCTAAAGCAGGCCATAGCGGAAGATCCAGATGATGCAGTTCAGTGGCACCAACTTGGCCTTCACAGTCTTTGTGCCAGGGAATTCAAAACATCACAAAAATACCTCAAAGCTGCTGTTGCCTGTGACAAGGGTTGCAGCTATGCATGGTCTAACCTCGGTGTCTCACTTCAACTATCAGAAGAACAATCACAAGCTGAAGAAGTATACAAACGGGCTTTGTCTTTGGCAACGAAACAAGAAGCACATGCTATACTATCCAATATGGGAATTCTCTATCGCCAGCAGAAAAAATATGAACTTGCAAAGGCCATGTTTACAAAGTCACTTGAACTTCAGCCTGGATATGCTCCTGCATTCAACAATCTGGGTCTTGTTTTTATTGCAGAGGGTCTGTTAGAAGAGGCCAAGTATTGTTTTGAGAAAGCACTCCAATCAGATTCAATGCTGGATGCAGCCAAGTCTAACTTGATTAAGGTTGCCACAATGTCGAAGATATGCAAAGACCTTTCCTCATGCACTCTTAAAGAATGA

Protein sequence

>Msa0370680

MVFTAKENCIWHSNPQCLIIESSSENSSDKELEPHELEEILSKLKESTQSDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGDLELSAKCFQELILKDQNHPAALVNYAALLLCKNASVVAGAGANAADDASAEQSMAANVAKECLLAAVKADGKSAHIWANLAYAFAITGNHRISSKCLEKAAKLEPNCMSARYAVASHRIKEAERSQDPSELLSSAGNEMASIIRDGDSSLVELPIAWAGLAMVHKAQHEISAAYESEQDGLKEIEERAVSSLKQAIAEDPDDAVQWHQLGLHSLCAREFKTSQKYLKAAVACDKGCSYAWSNLGVSLQLSEEQSQAEEVYKRALSLATKQEAHAILSNMGILYRQQKKYELAKAMFTKSLELQPGYAPAFNNLGLVFIAEGLLEEAKYCFEKALQSDSMLDAAKSNLIKVATMSKICKDLSSCTLKE*