AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0373850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373850 MtrunA17_Chr3g0123351 99.387 326 2 0 1 326 491 816 0.0 694
Msa0373850 MtrunA17_Chr3g0115081 76.115 314 72 3 1 312 459 771 3.67e-175 504
Msa0373850 MtrunA17_Chr3g0131011 72.698 315 79 5 1 312 439 749 9.09e-169 488
Msa0373850 MtrunA17_Chr5g0424281 72.381 315 82 4 1 312 453 765 1.28e-162 473
Msa0373850 MtrunA17_Chr4g0056441 69.427 314 91 5 1 312 447 757 8.18e-162 470
Msa0373850 MtrunA17_Chr7g0238731 33.546 313 185 10 1 298 127 431 1.11e-37 139
Msa0373850 MtrunA17_Chr4g0031691 31.889 323 197 11 1 308 123 437 5.83e-36 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373850 AT1G13170.1 86.452 310 42 0 1 310 489 798 0.0 591
Msa0373850 AT1G13170.2 86.452 310 42 0 1 310 510 819 0.0 591
Msa0373850 AT4G08180.2 73.885 314 79 3 1 312 492 804 2.63e-169 491
Msa0373850 AT4G08180.1 73.885 314 79 3 1 312 493 805 2.95e-169 491
Msa0373850 AT4G08180.4 73.885 314 79 3 1 312 493 805 2.95e-169 491
Msa0373850 AT4G08180.3 72.930 314 82 3 1 312 492 804 6.37e-167 485
Msa0373850 AT4G22540.2 67.834 314 98 3 1 312 189 501 6.93e-165 469
Msa0373850 AT4G22540.3 67.834 314 98 3 1 312 189 501 6.93e-165 469
Msa0373850 AT4G22540.6 67.834 314 98 3 1 312 189 501 6.93e-165 469
Msa0373850 AT4G22540.4 67.834 314 98 3 1 312 189 501 6.93e-165 469
Msa0373850 AT2G31020.1 71.429 315 78 5 1 312 467 772 8.17e-164 476
Msa0373850 AT4G22540.5 67.834 314 98 3 1 312 400 712 1.33e-162 471
Msa0373850 AT4G22540.1 67.834 314 98 3 1 312 400 712 1.33e-162 471
Msa0373850 AT4G12460.3 66.879 314 94 4 1 312 191 496 7.29e-160 456
Msa0373850 AT4G12460.4 66.879 314 94 4 1 312 191 496 7.29e-160 456
Msa0373850 AT4G12460.9 66.879 314 94 4 1 312 191 496 7.29e-160 456
Msa0373850 AT2G31030.1 68.471 314 89 4 1 312 182 487 7.30e-160 456
Msa0373850 AT4G12460.2 66.561 314 93 5 1 312 53 356 1.35e-158 448
Msa0373850 AT4G12460.7 66.879 314 94 4 1 312 380 685 5.99e-158 458
Msa0373850 AT4G12460.8 66.879 314 94 4 1 312 379 684 6.14e-158 458
Msa0373850 AT4G12460.1 66.879 314 94 4 1 312 379 684 6.14e-158 458
Msa0373850 AT4G12460.5 67.391 230 66 3 1 229 379 600 1.53e-114 344
Msa0373850 AT4G12460.6 67.391 230 66 3 1 229 380 601 1.72e-114 344
Msa0373850 AT3G09300.1 32.588 313 188 10 1 298 127 431 7.36e-37 137
Msa0373850 AT5G59420.1 31.629 313 193 9 1 299 122 427 3.06e-34 130
Msa0373850 AT5G02100.3 32.414 290 184 8 1 285 95 377 9.14e-34 129
Msa0373850 AT5G02100.1 32.414 290 184 8 1 285 122 404 9.88e-34 129
Msa0373850 AT5G02100.2 32.275 189 123 5 1 187 122 307 3.66e-21 92.4

Find 256 sgRNAs with CRISPR-Local

Find 537 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTGGCTGCGCATTTC+GGG 0.157402 3_1:+72961177 Msa0373850:three_prime_UTR
GAGAAGGTAGCAATGTTAAT+TGG 0.168502 3_1:+72960192 Msa0373850:CDS
TTTCTTCTGGCTGCGCATTT+CGG 0.201686 3_1:+72961176 Msa0373850:three_prime_UTR
ACAGGTTTCTCTTTCTCTTT+TGG 0.206881 3_1:-72958019 None:intergenic
CCAGAACTTTCCTTTCAAAT+TGG 0.215503 3_1:-72959374 None:intergenic
GATGGAATCTCTGATATATT+TGG 0.215908 3_1:+72961002 Msa0373850:CDS
TCAAACTCTCAGTGTCAATT+AGG 0.219163 3_1:+72954375 Msa0373850:five_prime_UTR
TGCCTACATACATCCATTTA+AGG 0.224282 3_1:-72954064 None:intergenic
TGAAATAATGCCTGGTTTAT+TGG 0.266677 3_1:+72960368 Msa0373850:CDS
ACCTAGTATAATATTGTATA+TGG 0.274460 3_1:-72959485 None:intergenic
TGTCTCACATCTTCGCATAT+TGG 0.277298 3_1:+72961205 Msa0373850:three_prime_UTR
CTTTCTTATTATAAGATTCA+TGG 0.279657 3_1:+72954657 Msa0373850:five_prime_UTR
AGAAATTTCAATACACTATC+TGG 0.280547 3_1:-72961158 None:intergenic
TCAATTATTAAAGACAATAT+TGG 0.284186 3_1:+72958052 Msa0373850:five_prime_UTR
AAGCGGCTTTCCGTATTTAC+TGG 0.295879 3_1:+72956070 Msa0373850:five_prime_UTR
AGGGAAGAGGATGGAAGTTC+TGG 0.296789 3_1:+72959344 Msa0373850:CDS
AATGTTGTGGTTATTGTTAC+TGG 0.304213 3_1:-72953964 None:intergenic
GATCAGAGACATTTGGAAAA+TGG 0.308611 3_1:+72960426 Msa0373850:CDS
GTCTCACATCTTCGCATATT+GGG 0.309566 3_1:+72961206 Msa0373850:three_prime_UTR
GAGAGGTTGTATCTTGTCTT+GGG 0.311130 3_1:-72960324 None:intergenic
TTCATCCTTCTTAAACCATC+TGG 0.316774 3_1:-72960922 None:intergenic
TAGTGTATTGAAATTTCTTC+TGG 0.319453 3_1:+72961163 Msa0373850:three_prime_UTR
AGTGGTTCATTAAAATAAAC+AGG 0.326599 3_1:-72958100 None:intergenic
AGAGAGTATAGTGCCTTAAA+TGG 0.329348 3_1:+72954051 Msa0373850:five_prime_UTR
CCAATTTGAAAGGAAAGTTC+TGG 0.331269 3_1:+72959374 Msa0373850:CDS
AATATTGGGAAGGATCTTTC+TGG 0.333747 3_1:+72958067 Msa0373850:five_prime_UTR
ATCGATACATGGGTGGCTAT+TGG 0.338961 3_1:+72960955 Msa0373850:CDS
AACCTTTCAATCCTCTGCTT+GGG 0.341547 3_1:+72959070 Msa0373850:CDS
CTGCTAAGGATAGGAGTGTT+AGG 0.343968 3_1:+72954703 Msa0373850:five_prime_UTR
GCAGAAACATGTTATGTTGT+TGG 0.352447 3_1:+72956351 Msa0373850:five_prime_UTR
GTCATAGGATCATAACCTTT+GGG 0.354076 3_1:-72960264 None:intergenic
GGTGTAGCTGGTAGTGTGGC+GGG 0.356766 3_1:+72954564 Msa0373850:five_prime_UTR
CAATTATTAAAGACAATATT+GGG 0.362443 3_1:+72958053 Msa0373850:five_prime_UTR
CATAGTTCATTAAAATTGAA+TGG 0.364592 3_1:+72953913 Msa0373850:five_prime_UTR
GACATTAGTAGTATAGTGTA+AGG 0.366040 3_1:-72953790 None:intergenic
TACAGTTGTTGTTATTGTTA+TGG 0.370310 3_1:-72954111 None:intergenic
TGTCATAGGATCATAACCTT+TGG 0.385591 3_1:-72960265 None:intergenic
TATGCCTTCCTGCGACAATC+TGG 0.385880 3_1:-72956248 None:intergenic
TCGATACATGGGTGGCTATT+GGG 0.387651 3_1:+72960956 Msa0373850:CDS
AATAATGCAGCTTCTGTCAT+AGG 0.390176 3_1:-72960279 None:intergenic
CAAACTCTCAGTGTCAATTA+GGG 0.396095 3_1:+72954376 Msa0373850:five_prime_UTR
TAACCTTTGGGCTTTGTAGT+TGG 0.397123 3_1:-72960252 None:intergenic
ATAATCTCTATCATATATAC+TGG 0.397734 3_1:-72957909 None:intergenic
ACCAGGCATTATTTCATTCA+AGG 0.402595 3_1:-72960361 None:intergenic
GAAGCTGACTATCCAGATAA+AGG 0.405366 3_1:+72959102 Msa0373850:CDS
TGTTCTCACCCTACAGTTTG+AGG 0.407398 3_1:+72959426 Msa0373850:CDS
AGAAGGTAGCAATGTTAATT+GGG 0.408388 3_1:+72960193 Msa0373850:CDS
AAAATTTATTGTGACCACTA+TGG 0.408418 3_1:+72959508 Msa0373850:CDS
GTCGAAACTACGATATCTTC+TGG 0.412128 3_1:-72956211 None:intergenic
AGGCAAGAGAAAAGAACAAT+TGG 0.412285 3_1:+72960979 Msa0373850:CDS
TCCTTTATGCTGCATTGCTC+CGG 0.412848 3_1:+72954311 Msa0373850:five_prime_UTR
TTGAATGGTGGTGGTGTAGC+TGG 0.413586 3_1:+72954552 Msa0373850:five_prime_UTR
GAGACCAGATCAGAGACATT+TGG 0.425840 3_1:+72960419 Msa0373850:CDS
GTTGGACACCTTAAAACAAC+TGG 0.428345 3_1:+72956369 Msa0373850:five_prime_UTR
ATTGTTATGGCAGGCTATAA+AGG 0.430453 3_1:-72954098 None:intergenic
GAGGTCGAGGTGGTTTGTGC+TGG 0.440865 3_1:+72954623 Msa0373850:five_prime_UTR
ATTCTACCTGATGTGGATTA+CGG 0.441592 3_1:-72959600 None:intergenic
ACCGGAGCAATGCAGCATAA+AGG 0.442402 3_1:-72954312 None:intergenic
TTCATCGTTAGCAGGGGATT+CGG 0.445059 3_1:+72954458 Msa0373850:five_prime_UTR
TCGATAGGAAGCACTTCTTA+AGG 0.446117 3_1:-72957864 None:intergenic
CAATTTGAAAGGAAAGTTCT+GGG 0.446597 3_1:+72959375 Msa0373850:CDS
AGGTTTGCACTGTCGACCTT+CGG 0.447760 3_1:-72959052 None:intergenic
AGTTGATAGAGCATTGGAAT+GGG 0.452108 3_1:+72958168 Msa0373850:five_prime_UTR
GTTGTTGTTATTGTTATGGC+AGG 0.457606 3_1:-72954107 None:intergenic
ATCGCTGCTTGTCAGAGCCC+TGG 0.457953 3_1:-72956179 None:intergenic
TTCTATTCAGTTAGATCCTG+TGG 0.458107 3_1:+72959402 Msa0373850:CDS
TTTGTTCAAGACAACAGAAC+TGG 0.458145 3_1:+72960168 Msa0373850:CDS
ATAATTGACCACAAGCCAAC+AGG 0.459158 3_1:-72958037 None:intergenic
TTATTATAAGATTCATGGAC+CGG 0.459192 3_1:+72954662 Msa0373850:five_prime_UTR
TGGAATGGGGAAAGCAGGTC+AGG 0.459379 3_1:+72958182 Msa0373850:five_prime_UTR
CTGTACAAGTGGGTGAATTA+CGG 0.459389 3_1:+72954591 Msa0373850:five_prime_UTR
AGAGAGGTTGTATCTTGTCT+TGG 0.459636 3_1:-72960325 None:intergenic
CTTTGGTGAGATACATTTGA+AGG 0.460035 3_1:+72954827 Msa0373850:five_prime_UTR
ATGCAAATGCAGAGAAACTA+AGG 0.461375 3_1:+72960460 Msa0373850:CDS
AAACCTTTCAATCCTCTGCT+TGG 0.461808 3_1:+72959069 Msa0373850:CDS
GCTATCCTTATGTCAAAAGA+AGG 0.462480 3_1:+72957981 Msa0373850:five_prime_UTR
AGCTGCATTATTGTGGGAAA+AGG 0.463826 3_1:+72960290 Msa0373850:CDS
TCGGAAGTCTCATATCTTCA+AGG 0.464893 3_1:+72956310 Msa0373850:five_prime_UTR
GATAAATTGTAAATTAACAT+AGG 0.470126 3_1:-72961247 None:intergenic
CGGTCTCGATCGATCGAAAC+CGG 0.471589 3_1:-72954330 None:intergenic
AGTTTGTGAAGAAGGCGAAT+TGG 0.471857 3_1:+72954748 Msa0373850:five_prime_UTR
ACGGTAAGGGGTGGAGGTCG+AGG 0.472773 3_1:+72954610 Msa0373850:five_prime_UTR
ACTCATGATTCATCGTTAGC+AGG 0.473903 3_1:+72954450 Msa0373850:five_prime_UTR
TGAATTACGGTAAGGGGTGG+AGG 0.476607 3_1:+72954604 Msa0373850:five_prime_UTR
ACTTACAACCTACGTCCAAA+TGG 0.478390 3_1:-72961116 None:intergenic
ATTCTCCATGATGGTTCGCA+TGG 0.479835 3_1:+72957932 Msa0373850:five_prime_UTR
ACTAAGCAATGCAAGCCCTT+TGG 0.482324 3_1:+72954810 Msa0373850:five_prime_UTR
AGGTGGTTTGTGCTGGAAGA+TGG 0.484001 3_1:+72954630 Msa0373850:five_prime_UTR
AATCGAGGTAATGGAGTAGT+TGG 0.485035 3_1:+72954777 Msa0373850:five_prime_UTR
TCCTTGAATGAAATAATGCC+TGG 0.486395 3_1:+72960360 Msa0373850:CDS
TCATATATCAATCAGGTCCA+TGG 0.488165 3_1:+72960144 Msa0373850:intron
AGAGATTATATTCTCCATGA+TGG 0.491772 3_1:+72957923 Msa0373850:five_prime_UTR
GACAGAAGCTGCATTATTGT+GGG 0.492765 3_1:+72960284 Msa0373850:CDS
GGACTCATCAAGATCTTATC+CGG 0.494187 3_1:-72954681 None:intergenic
GTCGGCGAAGTTTGTGAAGA+AGG 0.494815 3_1:+72954740 Msa0373850:five_prime_UTR
ATGATTCAAACCCGCGGAAG+AGG 0.496646 3_1:-72954487 None:intergenic
CTCATGATTCATCGTTAGCA+GGG 0.496650 3_1:+72954451 Msa0373850:five_prime_UTR
TTCTATTCTGTTATGTCGGA+AGG 0.501177 3_1:+72957731 Msa0373850:five_prime_UTR
TAGCAATGTTAATTGGGAAG+TGG 0.502076 3_1:+72960199 Msa0373850:CDS
CGTGATTCGAAGGTGTTGAA+TGG 0.502852 3_1:+72954537 Msa0373850:five_prime_UTR
GTAGAGTTATACAGAGAGGC+AGG 0.506854 3_1:+72954012 Msa0373850:five_prime_UTR
CATAGACCGTAATCCACATC+AGG 0.510334 3_1:+72959594 Msa0373850:CDS
TGGAACGTGAATCGAGGTAA+TGG 0.510875 3_1:+72954768 Msa0373850:five_prime_UTR
AGCATTGGAATGGGGAAAGC+AGG 0.511126 3_1:+72958177 Msa0373850:five_prime_UTR
AGCAATGTTAATTGGGAAGT+GGG 0.511602 3_1:+72960200 Msa0373850:CDS
CAAGTGGGTGAATTACGGTA+AGG 0.513340 3_1:+72954596 Msa0373850:five_prime_UTR
AGATGGTTCTTATCGATACA+TGG 0.513483 3_1:+72960944 Msa0373850:CDS
AGCGGCTTTCCGTATTTACT+GGG 0.514457 3_1:+72956071 Msa0373850:five_prime_UTR
TCGCTGCTTGTCAGAGCCCT+GGG 0.516479 3_1:-72956178 None:intergenic
TGACAGAAGCTGCATTATTG+TGG 0.520354 3_1:+72960283 Msa0373850:CDS
CGAGGTAATGGAGTAGTTGG+AGG 0.520545 3_1:+72954780 Msa0373850:five_prime_UTR
TTCAAATGTATCTCACCAAA+GGG 0.520600 3_1:-72954825 None:intergenic
TGGTGTAGCTGGTAGTGTGG+CGG 0.522017 3_1:+72954563 Msa0373850:five_prime_UTR
CAAACCCATGCGAACCATCA+TGG 0.522192 3_1:-72957937 None:intergenic
TCCGGCTATGCGTCCACCGA+AGG 0.523101 3_1:+72959036 Msa0373850:CDS
GAGTTTGACTTGGACACCAC+CGG 0.524959 3_1:-72954360 None:intergenic
CTAACACTCCTATCCTTAGC+AGG 0.525096 3_1:-72954702 None:intergenic
GCTTGAACAGTTACAGAGAC+AGG 0.526015 3_1:+72960482 Msa0373850:CDS
AAAGAGGATGGCAGCCCAGA+TGG 0.527746 3_1:+72960907 Msa0373850:CDS
CAAGGGAATAGAAGATATAG+TGG 0.527984 3_1:+72957456 Msa0373850:five_prime_UTR
GGGAAGAGGATGGAAGTTCT+GGG 0.528074 3_1:+72959345 Msa0373850:CDS
TCATCCTTCTTAAACCATCT+GGG 0.529279 3_1:-72960921 None:intergenic
CTGCGAGTCTATTATGCTCT+CGG 0.531114 3_1:+72956291 Msa0373850:five_prime_UTR
ACCTTCGGTGGACGCATAGC+CGG 0.535688 3_1:-72959037 None:intergenic
TTTCACCATCCTCAAACTGT+AGG 0.535836 3_1:-72959435 None:intergenic
TAGTTGATAGAGCATTGGAA+TGG 0.536176 3_1:+72958167 Msa0373850:five_prime_UTR
AGAAATGAAATGAAACGAAA+CGG 0.539388 3_1:-72954203 None:intergenic
AAGCAATGTATTATGTACTC+GGG 0.540009 3_1:+72960226 Msa0373850:CDS
ACCTTTCAATCCTCTGCTTG+GGG 0.540289 3_1:+72959071 Msa0373850:CDS
TTCTCCATGATGGTTCGCAT+GGG 0.540956 3_1:+72957933 Msa0373850:five_prime_UTR
TCCATATACAATATTATACT+AGG 0.541406 3_1:+72959484 Msa0373850:CDS
TCTTTCACTGTGGAGAGAAG+TGG 0.541473 3_1:-72953830 None:intergenic
AGAGTATAACAGTCGCGGAT+CGG 0.543018 3_1:+72954262 Msa0373850:five_prime_UTR
CGTGAGTCATATTGCACACA+AGG 0.543291 3_1:+72957438 Msa0373850:five_prime_UTR
ATTCCAATGCTCTATCAACT+AGG 0.544260 3_1:-72958165 None:intergenic
CAGTGACAAGCAACAACCAT+TGG 0.546451 3_1:-72959319 None:intergenic
GAAGCAATGTATTATGTACT+CGG 0.546711 3_1:+72960225 Msa0373850:CDS
TGTACCTTCTCTACTTCGAT+AGG 0.547021 3_1:-72957879 None:intergenic
CGGTTTCGATCGATCGAGAC+CGG 0.547274 3_1:+72954331 Msa0373850:five_prime_UTR
CTATGGTACCATGCACATCA+AGG 0.547735 3_1:+72959525 Msa0373850:CDS
TCGAAGGTGTTGAATGGTGG+TGG 0.549430 3_1:+72954543 Msa0373850:five_prime_UTR
TGCCTTAAATGGATGTATGT+AGG 0.550146 3_1:+72954062 Msa0373850:five_prime_UTR
TGCTAAGGATAGGAGTGTTA+GGG 0.550632 3_1:+72954704 Msa0373850:five_prime_UTR
GCAGACGGAGAAAATAGAGT+TGG 0.550999 3_1:+72957386 Msa0373850:intron
GGTCTCAACCTTGAGTCAGT+TGG 0.551175 3_1:-72960402 None:intergenic
GGCAAGAGAAAAGAACAATT+GGG 0.551650 3_1:+72960980 Msa0373850:CDS
ATACACAATTCTACCTGATG+TGG 0.553182 3_1:-72959607 None:intergenic
CTCAACCTTGAGTCAGTTGG+AGG 0.553760 3_1:-72960399 None:intergenic
CTATATGTCCATTTGGACGT+AGG 0.554353 3_1:+72961108 Msa0373850:three_prime_UTR
GTAGATAATGAAAGTCAAGA+TGG 0.554991 3_1:+72957773 Msa0373850:five_prime_UTR
TTCGGTGAAATCCTCTTCCG+CGG 0.557647 3_1:+72954476 Msa0373850:five_prime_UTR
AGGAAATTGCGAAGGGAGAG+AGG 0.558262 3_1:-72960341 None:intergenic
AAGTGGGTGAATTACGGTAA+GGG 0.558842 3_1:+72954597 Msa0373850:five_prime_UTR
TGGGCAGACTCCAATTTGAA+AGG 0.559546 3_1:+72959364 Msa0373850:CDS
GGTAATGGAGTAGTTGGAGG+TGG 0.559553 3_1:+72954783 Msa0373850:five_prime_UTR
TGGTTTAAGAAGGATGAAGA+TGG 0.560153 3_1:+72960927 Msa0373850:CDS
TGATGAGTCCTGCTAAGGAT+AGG 0.561501 3_1:+72954694 Msa0373850:five_prime_UTR
TTCATTCAAGGAAATTGCGA+AGG 0.562873 3_1:-72960349 None:intergenic
GCAAGAAAGATGCAAGAAAG+AGG 0.565562 3_1:+72960891 Msa0373850:CDS
TATCGAAGTAGAGAAGGTAC+AGG 0.567775 3_1:+72957881 Msa0373850:five_prime_UTR
TCCCCAAGCAGAGGATTGAA+AGG 0.567797 3_1:-72959072 None:intergenic
CATATATCAATCAGGTCCAT+GGG 0.568149 3_1:+72960145 Msa0373850:intron
GATAGGAGTGTTAGGGTGAT+CGG 0.568158 3_1:+72954711 Msa0373850:five_prime_UTR
CTATCCTTATGTCAAAAGAA+GGG 0.568464 3_1:+72957982 Msa0373850:five_prime_UTR
GATCTTGATGAGTCCTGCTA+AGG 0.569317 3_1:+72954689 Msa0373850:five_prime_UTR
AGTGGCGAAGGAAGAGAGAG+AGG 0.569731 3_1:-72953812 None:intergenic
AAACCTAGTTGATAGAGCAT+TGG 0.570994 3_1:+72958162 Msa0373850:five_prime_UTR
TTTCTTTCTTTCTTTCACTG+TGG 0.572189 3_1:-72953840 None:intergenic
TCATTCAAGGAAATTGCGAA+GGG 0.572598 3_1:-72960348 None:intergenic
GCTGAAACAGATGATGAAGA+TGG 0.574131 3_1:+72957803 Msa0373850:five_prime_UTR
AAGGAAAACCAGTGTTCAGT+AGG 0.575906 3_1:-72961066 None:intergenic
TCCGCTGCCCTTGATGTGCA+TGG 0.576078 3_1:-72959533 None:intergenic
AGAGAAAAGAACAATTGGGA+TGG 0.577912 3_1:+72960984 Msa0373850:CDS
TTTGCACTGTCGACCTTCGG+TGG 0.578036 3_1:-72959049 None:intergenic
AAATGGATGTATGTAGGCAG+TGG 0.581226 3_1:+72954068 Msa0373850:five_prime_UTR
TAGGGTGATCGGTGAGGAGT+CGG 0.581596 3_1:+72954722 Msa0373850:five_prime_UTR
TTGACACTGAGAGTTTGACT+TGG 0.582949 3_1:-72954370 None:intergenic
GCTGCGATCCAGATTGTCGC+AGG 0.583112 3_1:+72956240 Msa0373850:five_prime_UTR
CGATCCAGATTGTCGCAGGA+AGG 0.583509 3_1:+72956244 Msa0373850:five_prime_UTR
CTCACCCTACAGTTTGAGGA+TGG 0.584327 3_1:+72959430 Msa0373850:CDS
TCGGTGAAATCCTCTTCCGC+GGG 0.584385 3_1:+72954477 Msa0373850:five_prime_UTR
TTCACCATCCTCAAACTGTA+GGG 0.585643 3_1:-72959434 None:intergenic
CATTAGTAGTATAGTGTAAG+GGG 0.586064 3_1:-72953788 None:intergenic
AGATTTCTATTCTGTTATGT+CGG 0.586785 3_1:+72957727 Msa0373850:intron
CTTCAAATGTATCTCACCAA+AGG 0.591601 3_1:-72954826 None:intergenic
AGACAACAGAACTGGAGAGA+AGG 0.592664 3_1:+72960176 Msa0373850:CDS
TGTTGTCTTGAACAAACCCA+TGG 0.592809 3_1:-72960161 None:intergenic
TCCTGAACGAAAGATGTGAC+AGG 0.594171 3_1:-72961305 None:intergenic
TATTAAAGACAATATTGGGA+AGG 0.594490 3_1:+72958057 Msa0373850:five_prime_UTR
GCTTGTCACTGTGAGGGAAG+AGG 0.594775 3_1:+72959331 Msa0373850:CDS
TCTATTCAGTTAGATCCTGT+GGG 0.597031 3_1:+72959403 Msa0373850:CDS
AGTTGCCTCCAACTGACTCA+AGG 0.597649 3_1:+72960394 Msa0373850:CDS
AAGAGAAACCTGTTGGCTTG+TGG 0.599183 3_1:+72958029 Msa0373850:five_prime_UTR
TGGCGGGGATACTGTACAAG+TGG 0.600268 3_1:+72954580 Msa0373850:five_prime_UTR
ACATTAGTAGTATAGTGTAA+GGG 0.603339 3_1:-72953789 None:intergenic
GGGTGAATTACGGTAAGGGG+TGG 0.603460 3_1:+72954601 Msa0373850:five_prime_UTR
GCTTCCTATCGAAGTAGAGA+AGG 0.604750 3_1:+72957875 Msa0373850:five_prime_UTR
GCAGCCCAGATGGTTTAAGA+AGG 0.605725 3_1:+72960917 Msa0373850:CDS
GAAAGATGCAAGAAAGAGGA+TGG 0.608320 3_1:+72960895 Msa0373850:CDS
AGGATTCATTGATCACTCAT+CGG 0.608780 3_1:-72954292 None:intergenic
GAAAGATGTGACAGGTAGAG+AGG 0.612229 3_1:-72961297 None:intergenic
GAGTGTTAGGGTGATCGGTG+AGG 0.613789 3_1:+72954716 Msa0373850:five_prime_UTR
CGATCGAGACCGGAGTACTC+CGG 0.614542 3_1:+72954341 Msa0373850:five_prime_UTR
TGGACACCACCGGAGTACTC+CGG 0.615450 3_1:-72954350 None:intergenic
AGGATGGTGAAACATTTCAG+TGG 0.616673 3_1:+72959446 Msa0373850:CDS
GATTGTATCCTACTGAACAC+TGG 0.617725 3_1:+72961058 Msa0373850:exon
ACAATCTCTTCAGAACATGA+AGG 0.618331 3_1:-72961041 None:intergenic
CTGCAGGGCTTCAATCCACA+TGG 0.618507 3_1:-72956137 None:intergenic
AGAGGTTGTATCTTGTCTTG+GGG 0.618783 3_1:-72960323 None:intergenic
GTTGATAGAGCATTGGAATG+GGG 0.620034 3_1:+72958169 Msa0373850:five_prime_UTR
GCAGGTTAGTCATCATCCAA+TGG 0.621822 3_1:+72959303 Msa0373850:intron
TATGGTACCATGCACATCAA+GGG 0.624068 3_1:+72959526 Msa0373850:CDS
AATTTGAAAGGAAAGTTCTG+GGG 0.624314 3_1:+72959376 Msa0373850:CDS
GTCACTGTGAGGGAAGAGGA+TGG 0.624810 3_1:+72959335 Msa0373850:CDS
TACTGTAGTAGATGAAACAA+AGG 0.625014 3_1:+72957413 Msa0373850:five_prime_UTR
CAACTAGGTTTGAGTACTCG+AGG 0.625286 3_1:-72958150 None:intergenic
AAAGAGAAAGAGAAACCTGT+TGG 0.625727 3_1:+72958022 Msa0373850:five_prime_UTR
ATCTCTGATATATTTGGACA+AGG 0.626371 3_1:+72961008 Msa0373850:CDS
GAATCATGATGAAGATGATG+TGG 0.628842 3_1:+72954503 Msa0373850:five_prime_UTR
GATGGTTCTTATCGATACAT+GGG 0.630124 3_1:+72960945 Msa0373850:CDS
TGAAACATTTCAGTGGAGCA+AGG 0.632886 3_1:+72959453 Msa0373850:CDS
GTTGTTGCTTGTCACTGTGA+GGG 0.633322 3_1:+72959325 Msa0373850:CDS
GTGTAGCTGGTAGTGTGGCG+GGG 0.633835 3_1:+72954565 Msa0373850:five_prime_UTR
GTAAGGGGTGGAGGTCGAGG+TGG 0.634093 3_1:+72954613 Msa0373850:five_prime_UTR
ACCATGCACATCAAGGGCAG+CGG 0.635881 3_1:+72959532 Msa0373850:CDS
GACAAAAGAAAGCACAGCTG+AGG 0.639921 3_1:-72958206 None:intergenic
GGCAACTTCACCAATAAACC+AGG 0.640370 3_1:-72960378 None:intergenic
TCATAAGTCTCCCCAAGCAG+AGG 0.640828 3_1:-72959081 None:intergenic
TCATGATTCATCGTTAGCAG+GGG 0.643169 3_1:+72954452 Msa0373850:five_prime_UTR
TACCTTGACAAAATGAACCT+AGG 0.648485 3_1:-72958255 None:intergenic
GCGAATTGGAACGTGAATCG+AGG 0.648599 3_1:+72954762 Msa0373850:five_prime_UTR
TGGTGGTGTAGCTGGTAGTG+TGG 0.649309 3_1:+72954560 Msa0373850:five_prime_UTR
ATTTGAAAGGAAAGTTCTGG+GGG 0.649854 3_1:+72959377 Msa0373850:CDS
TTCATCATGATTCAAACCCG+CGG 0.649867 3_1:-72954493 None:intergenic
TGATCAGAGTATAACAGTCG+CGG 0.651914 3_1:+72954257 Msa0373850:five_prime_UTR
ACTGTGGAGAGAAGTGGCGA+AGG 0.652598 3_1:-72953824 None:intergenic
GATTCGAAGGTGTTGAATGG+TGG 0.655086 3_1:+72954540 Msa0373850:five_prime_UTR
GGACACCTTAAAACAACTGG+AGG 0.657233 3_1:+72956372 Msa0373850:five_prime_UTR
GGTTGTTGCTTGTCACTGTG+AGG 0.658525 3_1:+72959324 Msa0373850:CDS
GAATGAAGTTCGTGATTCGA+AGG 0.658790 3_1:+72954527 Msa0373850:five_prime_UTR
AGTGGGTGAATTACGGTAAG+GGG 0.660910 3_1:+72954598 Msa0373850:five_prime_UTR
ATACATGGGTGGCTATTGGG+AGG 0.673085 3_1:+72960959 Msa0373850:CDS
TCAGCAAGTCTGATGACAAG+CGG 0.674731 3_1:+72956053 Msa0373850:five_prime_UTR
TGTAGGGTGAGAACACCCAC+AGG 0.676850 3_1:-72959418 None:intergenic
GTTAGATTCATCGATCAGAA+CGG 0.677473 3_1:+72954398 Msa0373850:five_prime_UTR
GGCGGGGATACTGTACAAGT+GGG 0.678286 3_1:+72954581 Msa0373850:five_prime_UTR
TGGTTCGCATGGGTTTGAGA+TGG 0.680779 3_1:+72957943 Msa0373850:five_prime_UTR
TGATGTGCATGGTACCATAG+TGG 0.687505 3_1:-72959522 None:intergenic
GGTTCTTATCGATACATGGG+TGG 0.688046 3_1:+72960948 Msa0373850:CDS
AGCAATGTATTATGTACTCG+GGG 0.689080 3_1:+72960227 Msa0373850:CDS
GATCCAACTACAAAGCCCAA+AGG 0.692121 3_1:+72960249 Msa0373850:CDS
TCGAGACCGGAGTACTCCGG+TGG 0.699586 3_1:+72954344 Msa0373850:five_prime_UTR
AGTAGTAGAGTTATACAGAG+AGG 0.703702 3_1:+72954008 Msa0373850:five_prime_UTR
GTGGTTCATTAAAATAAACA+GGG 0.715478 3_1:-72958099 None:intergenic
CTAGAGAAGACAGAGCCATG+TGG 0.716663 3_1:+72956122 Msa0373850:five_prime_UTR
GTGAGTCATATTGCACACAA+GGG 0.744442 3_1:+72957439 Msa0373850:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAATGTTTTACAATTTT+GGG + chr3_1:72955322-72955341 Msa0373850:intron 10.0%
!! TATATTTGATTCAATTATTA+TGG + chr3_1:72960059-72960078 Msa0373850:intron 10.0%
!!! TATTTTATTTGTAAACAAAT+GGG - chr3_1:72960696-72960715 None:intergenic 10.0%
!!! TTATTTTATTTGTAAACAAA+TGG - chr3_1:72960697-72960716 None:intergenic 10.0%
!!! CTATCATATTTTTTGTAATT+AGG - chr3_1:72955284-72955303 None:intergenic 15.0%
!!! GATAAAATGTTTTACAATTT+TGG + chr3_1:72955321-72955340 Msa0373850:intron 15.0%
!!! AAATGGTAGAATTTTTTTTT+GGG + chr3_1:72955352-72955371 Msa0373850:intron 15.0%
!! AAAAAAAAAAAAAACACTCA+TGG - chr3_1:72955924-72955943 None:intergenic 15.0%
!! TATTATGAATCAGAATATAA+TGG - chr3_1:72956430-72956449 None:intergenic 15.0%
!!! TAAAATAATTAGGAGTATTT+TGG + chr3_1:72956995-72957014 Msa0373850:intron 15.0%
!!! TTAAGAGAAAATCAAAATTT+TGG - chr3_1:72957357-72957376 None:intergenic 15.0%
!! ATAAAAGCAACTATTTAAAA+TGG - chr3_1:72957584-72957603 None:intergenic 15.0%
!! TCAATTATTAAAGACAATAT+TGG + chr3_1:72958052-72958071 Msa0373850:five_prime_UTR 15.0%
!! CAATTATTAAAGACAATATT+GGG + chr3_1:72958053-72958072 Msa0373850:five_prime_UTR 15.0%
!! AATATATTGGGAAAATAATT+TGG - chr3_1:72958439-72958458 None:intergenic 15.0%
!!! TAAGTTTATTGATAATCAAA+GGG - chr3_1:72959660-72959679 None:intergenic 15.0%
!!! TTAAGTTTATTGATAATCAA+AGG - chr3_1:72959661-72959680 None:intergenic 15.0%
!!! AAATTTAAGATTTCATTTCA+CGG - chr3_1:72959968-72959987 None:intergenic 15.0%
!!! ATTTTAATCATATATCAATC+AGG + chr3_1:72960137-72960156 Msa0373850:intron 15.0%
!! TTGATTCATATTCATAATTT+AGG + chr3_1:72960869-72960888 Msa0373850:intron 15.0%
!! GATAAATTGTAAATTAACAT+AGG - chr3_1:72961250-72961269 None:intergenic 15.0%
!!! CATTCAATTTTAATGAACTA+TGG - chr3_1:72953915-72953934 None:intergenic 20.0%
!! CATAGTTCATTAAAATTGAA+TGG + chr3_1:72953913-72953932 Msa0373850:five_prime_UTR 20.0%
!!! ATGCATTTTAATAAATGTTG+TGG - chr3_1:72953980-72953999 None:intergenic 20.0%
!! CTTTCTTATTATAAGATTCA+TGG + chr3_1:72954657-72954676 Msa0373850:five_prime_UTR 20.0%
!! ATGTAAACATGAACTTTATT+TGG + chr3_1:72955186-72955205 Msa0373850:intron 20.0%
!! TTTAGTCAACATGTAATTAA+AGG + chr3_1:72955257-72955276 Msa0373850:intron 20.0%
!! TACAAAAAATATGATAGTTC+AGG + chr3_1:72955287-72955306 Msa0373850:intron 20.0%
!!! GAAATGGTAGAATTTTTTTT+TGG + chr3_1:72955351-72955370 Msa0373850:intron 20.0%
!! AAAAGATAATACAAAGAAGA+GGG - chr3_1:72955489-72955508 None:intergenic 20.0%
!! TAAAAGATAATACAAAGAAG+AGG - chr3_1:72955490-72955509 None:intergenic 20.0%
!!! TCTTTGTATTATCTTTTAGT+TGG + chr3_1:72955492-72955511 Msa0373850:intron 20.0%
!! GGAAAGTTTACATTTAAAAA+CGG - chr3_1:72955968-72955987 None:intergenic 20.0%
!! CAAACAAACATAATTAGATT+TGG - chr3_1:72956014-72956033 None:intergenic 20.0%
!!! ACATTACTTTTCACTATTTA+GGG - chr3_1:72956765-72956784 None:intergenic 20.0%
!!! AACATTACTTTTCACTATTT+AGG - chr3_1:72956766-72956785 None:intergenic 20.0%
!! CAGTAATAATATCAATACAA+TGG - chr3_1:72957125-72957144 None:intergenic 20.0%
!! TGTTGATATGATATGTTTAA+TGG + chr3_1:72957254-72957273 Msa0373850:intron 20.0%
!! TCTTAAAAAATTAATGCAGA+CGG + chr3_1:72957371-72957390 Msa0373850:intron 20.0%
!!! TTAAATAGTTGCTTTTATTG+TGG + chr3_1:72957586-72957605 Msa0373850:intron 20.0%
!! ATAATCTCTATCATATATAC+TGG - chr3_1:72957912-72957931 None:intergenic 20.0%
!! ACAAAAGTGGAAAATATATT+GGG - chr3_1:72958451-72958470 None:intergenic 20.0%
!!! TTGTAGATTTAAAATACTTC+TGG + chr3_1:72958910-72958929 Msa0373850:intron 20.0%
!!! TGTAGATTTAAAATACTTCT+GGG + chr3_1:72958911-72958930 Msa0373850:intron 20.0%
!! AAAAATTTAACTCCTTTATC+TGG - chr3_1:72959117-72959136 None:intergenic 20.0%
!!! AGTTAAATTTTTTTCTGAGA+AGG + chr3_1:72959125-72959144 Msa0373850:CDS 20.0%
!! TGAAAATTTGAAGAAAAATC+TGG - chr3_1:72959154-72959173 None:intergenic 20.0%
!!! AGATTTTTCTTCAAATTTTC+AGG + chr3_1:72959153-72959172 Msa0373850:intron 20.0%
!! TCCATATACAATATTATACT+AGG + chr3_1:72959484-72959503 Msa0373850:CDS 20.0%
!! ACCTAGTATAATATTGTATA+TGG - chr3_1:72959488-72959507 None:intergenic 20.0%
!! TTTCGACAAATAATATAAAG+GGG - chr3_1:72959708-72959727 None:intergenic 20.0%
!! GTTTCGACAAATAATATAAA+GGG - chr3_1:72959709-72959728 None:intergenic 20.0%
!! TGTTTCGACAAATAATATAA+AGG - chr3_1:72959710-72959729 None:intergenic 20.0%
!! GTTAAAAATAGAACATCAAT+AGG - chr3_1:72959785-72959804 None:intergenic 20.0%
!!! TAGAATTTGTATTCCTTTTA+TGG + chr3_1:72959997-72960016 Msa0373850:intron 20.0%
!!! TTTTTTCCTATTTCTTTTCT+AGG + chr3_1:72960567-72960586 Msa0373850:intron 20.0%
!!! TTTTTGTCGAAATATTTACT+AGG + chr3_1:72960626-72960645 Msa0373850:intron 20.0%
! ACATTAGTAGTATAGTGTAA+GGG - chr3_1:72953792-72953811 None:intergenic 25.0%
!! TACAGTTGTTGTTATTGTTA+TGG - chr3_1:72954114-72954133 None:intergenic 25.0%
! AGAAATGAAATGAAACGAAA+CGG - chr3_1:72954206-72954225 None:intergenic 25.0%
! TTATTATAAGATTCATGGAC+CGG + chr3_1:72954662-72954681 Msa0373850:five_prime_UTR 25.0%
!! TGTTCATGTAAAAGTGATTT+TGG + chr3_1:72954983-72955002 Msa0373850:intron 25.0%
!! GTTCATGTAAAAGTGATTTT+GGG + chr3_1:72954984-72955003 Msa0373850:intron 25.0%
! ATATGTATGAAGTGCAATAA+TGG + chr3_1:72955044-72955063 Msa0373850:intron 25.0%
! TATGTATGAAGTGCAATAAT+GGG + chr3_1:72955045-72955064 Msa0373850:intron 25.0%
! ATGTTTACATGCAAATACAA+AGG - chr3_1:72955176-72955195 None:intergenic 25.0%
! GGTTTACTAAAAATTGACTA+CGG - chr3_1:72955228-72955247 None:intergenic 25.0%
!! ATGTTGACTAAATTGACTAA+CGG - chr3_1:72955249-72955268 None:intergenic 25.0%
!! AAATGTTTTACAATTTTGGG+AGG + chr3_1:72955325-72955344 Msa0373850:intron 25.0%
!!! GTAGAATTTTTTTTTGGGAA+AGG + chr3_1:72955357-72955376 Msa0373850:intron 25.0%
! AACCATTTATAATACAAGCA+AGG - chr3_1:72955460-72955479 None:intergenic 25.0%
!!! TTGTATTATCTTTTAGTTGG+TGG + chr3_1:72955495-72955514 Msa0373850:intron 25.0%
! ATTTCAAATACATCACTACT+TGG - chr3_1:72955706-72955725 None:intergenic 25.0%
! AACACAAACATCAAGAATAT+GGG - chr3_1:72955756-72955775 None:intergenic 25.0%
! TAACACAAACATCAAGAATA+TGG - chr3_1:72955757-72955776 None:intergenic 25.0%
! AGAAATAGTTATGACTTATG+AGG + chr3_1:72955850-72955869 Msa0373850:intron 25.0%
! ATCTAATTATGTTTGTTTGC+AGG + chr3_1:72956015-72956034 Msa0373850:intron 25.0%
!! GATTATTGATAACCTAATGT+TGG + chr3_1:72956587-72956606 Msa0373850:intron 25.0%
! ACAAATTTAATACAGCTATC+AGG - chr3_1:72956896-72956915 None:intergenic 25.0%
! TAAGCAAACAATACTATGAA+GGG - chr3_1:72956953-72956972 None:intergenic 25.0%
! AGTATTGTTTGCTTACTTAT+TGG + chr3_1:72956958-72956977 Msa0373850:intron 25.0%
!! ATGCAGTAGAAAATTTTAAG+CGG + chr3_1:72957032-72957051 Msa0373850:intron 25.0%
!!! AGTATTTACTGATTCAGTAA+TGG - chr3_1:72957235-72957254 None:intergenic 25.0%
! CAACATATACAGAATCATAA+TGG - chr3_1:72957298-72957317 None:intergenic 25.0%
!! AAGAACTTCATCTTTTAACA+AGG - chr3_1:72957329-72957348 None:intergenic 25.0%
! AAGACAAAAGATATAGTTCA+AGG - chr3_1:72957516-72957535 None:intergenic 25.0%
!!! TTGTTTTGAAGTTTCTATGT+TGG + chr3_1:72957660-72957679 Msa0373850:intron 25.0%
! AGATTTCTATTCTGTTATGT+CGG + chr3_1:72957727-72957746 Msa0373850:intron 25.0%
! TATTAAAGACAATATTGGGA+AGG + chr3_1:72958057-72958076 Msa0373850:five_prime_UTR 25.0%
! GTGGTTCATTAAAATAAACA+GGG - chr3_1:72958102-72958121 None:intergenic 25.0%
! AGTGGTTCATTAAAATAAAC+AGG - chr3_1:72958103-72958122 None:intergenic 25.0%
! AATATGTTCGGTTAAACTTA+AGG + chr3_1:72958281-72958300 Msa0373850:intron 25.0%
! AAAAAATAGCACAGATTTGA+TGG - chr3_1:72958415-72958434 None:intergenic 25.0%
! GACAAAAGTGGAAAATATAT+TGG - chr3_1:72958452-72958471 None:intergenic 25.0%
! GATATTAGCATCTATAAAAC+TGG - chr3_1:72958570-72958589 None:intergenic 25.0%
!! TTTTAATATTGATGTCAGTC+TGG + chr3_1:72958666-72958685 Msa0373850:intron 25.0%
!!! AGGAAGTATATTTTAATCCA+TGG - chr3_1:72958722-72958741 None:intergenic 25.0%
! AATAAGATTCACTCATTGTT+GGG + chr3_1:72958784-72958803 Msa0373850:intron 25.0%
!!! TTAATGGGTTTTACTGTAAA+TGG + chr3_1:72958963-72958982 Msa0373850:intron 25.0%
! AAAATTTATTGTGACCACTA+TGG + chr3_1:72959508-72959527 Msa0373850:CDS 25.0%
! GGAATTTAGTAAACTATGTT+GGG - chr3_1:72959764-72959783 None:intergenic 25.0%
! AGGAATTTAGTAAACTATGT+TGG - chr3_1:72959765-72959784 None:intergenic 25.0%
! AGAAATTTCAATACACTATC+TGG - chr3_1:72961161-72961180 None:intergenic 25.0%
! TAGTGTATTGAAATTTCTTC+TGG + chr3_1:72961163-72961182 Msa0373850:three_prime_UTR 25.0%
CATTAGTAGTATAGTGTAAG+GGG - chr3_1:72953791-72953810 None:intergenic 30.0%
GACATTAGTAGTATAGTGTA+AGG - chr3_1:72953793-72953812 None:intergenic 30.0%
TTTCTTTCTTTCTTTCACTG+TGG - chr3_1:72953843-72953862 None:intergenic 30.0%
! TCAGAGTTAGTAAAGTTTTG+AGG - chr3_1:72953876-72953895 None:intergenic 30.0%
AATGTTGTGGTTATTGTTAC+TGG - chr3_1:72953967-72953986 None:intergenic 30.0%
TTCAAATGTATCTCACCAAA+GGG - chr3_1:72954828-72954847 None:intergenic 30.0%
!! AATACTAGATGCTGATTCAT+AGG + chr3_1:72954864-72954883 Msa0373850:intron 30.0%
!! ATACTAGATGCTGATTCATA+GGG + chr3_1:72954865-72954884 Msa0373850:intron 30.0%
!! ATGTAAAAGTGATTTTGGGT+TGG + chr3_1:72954988-72955007 Msa0373850:intron 30.0%
CTATTATCCAAACATGTTGT+AGG + chr3_1:72955017-72955036 Msa0373850:intron 30.0%
TATATGACCTACAACATGTT+TGG - chr3_1:72955027-72955046 None:intergenic 30.0%
! AAATATGATAGTTCAGGTTC+AGG + chr3_1:72955293-72955312 Msa0373850:intron 30.0%
! AATATGATAGTTCAGGTTCA+GGG + chr3_1:72955294-72955313 Msa0373850:intron 30.0%
TTGAAGTTATCTCTTGAAAG+TGG + chr3_1:72955410-72955429 Msa0373850:intron 30.0%
TGGTTTCTTGCTAGAAAAAA+AGG + chr3_1:72955430-72955449 Msa0373850:intron 30.0%
GGTTTCTTGCTAGAAAAAAA+GGG + chr3_1:72955431-72955450 Msa0373850:intron 30.0%
GTTTCTTGCTAGAAAAAAAG+GGG + chr3_1:72955432-72955451 Msa0373850:intron 30.0%
TTTCTTGCTAGAAAAAAAGG+GGG + chr3_1:72955433-72955452 Msa0373850:intron 30.0%
GTCCTTGCTTGTATTATAAA+TGG + chr3_1:72955455-72955474 Msa0373850:intron 30.0%
TAAAATACATACTCTCTCTG+TGG + chr3_1:72955654-72955673 Msa0373850:intron 30.0%
TTTGTGTTAAATGAACGATC+TGG + chr3_1:72955768-72955787 Msa0373850:intron 30.0%
TTGTGTTAAATGAACGATCT+GGG + chr3_1:72955769-72955788 Msa0373850:intron 30.0%
ATCTGGGTTGTTGAAATATT+GGG + chr3_1:72955785-72955804 Msa0373850:intron 30.0%
!! CATAACTATTTCTACAGATG+TGG - chr3_1:72955843-72955862 None:intergenic 30.0%
ATGACAAAATGCAAGTGTAA+AGG - chr3_1:72955889-72955908 None:intergenic 30.0%
ATAATTAGATTTGGCACTCA+CGG - chr3_1:72956005-72956024 None:intergenic 30.0%
! AGTTTTTGTCCCAGTAAATA+CGG - chr3_1:72956083-72956102 None:intergenic 30.0%
CATAATATGCATTTCTGTTG+TGG + chr3_1:72956443-72956462 Msa0373850:intron 30.0%
GGATGGTTATAACAAGATAA+TGG + chr3_1:72956464-72956483 Msa0373850:intron 30.0%
GAATTTCCTAAAACACTAGA+AGG - chr3_1:72956659-72956678 None:intergenic 30.0%
TTAGGAAATTCAAGTGTGAA+AGG + chr3_1:72956668-72956687 Msa0373850:intron 30.0%
!! TGCTTCATAAAGAGTATTGT+AGG + chr3_1:72956716-72956735 Msa0373850:intron 30.0%
!! TTACTTTTCACTATTTAGGG+AGG - chr3_1:72956762-72956781 None:intergenic 30.0%
GTAAGCAAACAATACTATGA+AGG - chr3_1:72956954-72956973 None:intergenic 30.0%
! TGCAGTAGAAAATTTTAAGC+GGG + chr3_1:72957033-72957052 Msa0373850:intron 30.0%
! TAAAGACCGTCTCTTTTTAT+AGG - chr3_1:72957060-72957079 None:intergenic 30.0%
TCAATACAATGGTTGACATA+GGG - chr3_1:72957114-72957133 None:intergenic 30.0%
ATCAATACAATGGTTGACAT+AGG - chr3_1:72957115-72957134 None:intergenic 30.0%
TGATTCTGTATATGTTGTGT+CGG + chr3_1:72957301-72957320 Msa0373850:intron 30.0%
TACTGTAGTAGATGAAACAA+AGG + chr3_1:72957413-72957432 Msa0373850:five_prime_UTR 30.0%
!!! TTTTGAAGTTTCTATGTTGG+TGG + chr3_1:72957663-72957682 Msa0373850:intron 30.0%
ATAGAAATCTGATACACAAG+TGG - chr3_1:72957717-72957736 None:intergenic 30.0%
GTAGATAATGAAAGTCAAGA+TGG + chr3_1:72957773-72957792 Msa0373850:five_prime_UTR 30.0%
AGAGATTATATTCTCCATGA+TGG + chr3_1:72957923-72957942 Msa0373850:five_prime_UTR 30.0%
CTATCCTTATGTCAAAAGAA+GGG + chr3_1:72957982-72958001 Msa0373850:five_prime_UTR 30.0%
! TTATCCCTTCTTTTGACATA+AGG - chr3_1:72957989-72958008 None:intergenic 30.0%
!! TTTTAAAAGCATGATCTCCT+AGG + chr3_1:72958238-72958257 Msa0373850:five_prime_UTR 30.0%
GTCAAGGTAGATAATATGTT+CGG + chr3_1:72958269-72958288 Msa0373850:intron 30.0%
TTTACAACATGTTGAACAAG+TGG - chr3_1:72958356-72958375 None:intergenic 30.0%
!! CATGTTGTAAAGTATTGTTC+TGG + chr3_1:72958365-72958384 Msa0373850:intron 30.0%
TAATTCGTCCATCTAGTATT+AGG + chr3_1:72958388-72958407 Msa0373850:intron 30.0%
AATTCGTCCATCTAGTATTA+GGG + chr3_1:72958389-72958408 Msa0373850:intron 30.0%
AAAAAAACACGAGACAAAAG+TGG - chr3_1:72958464-72958483 None:intergenic 30.0%
AAAGCAATTCATTAGAGAGA+GGG - chr3_1:72958525-72958544 None:intergenic 30.0%
CAATAAGATTCACTCATTGT+TGG + chr3_1:72958783-72958802 Msa0373850:intron 30.0%
TAAAAACTCAACTCCAAGAA+AGG - chr3_1:72958868-72958887 None:intergenic 30.0%
ATTAGATAGATAGATGTCAG+TGG + chr3_1:72958887-72958906 Msa0373850:intron 30.0%
ATAAGACAACTGAAACAGTA+GGG + chr3_1:72958939-72958958 Msa0373850:intron 30.0%
!! CTATTTTGGATTCAATGGAT+AGG - chr3_1:72959230-72959249 None:intergenic 30.0%
!! TACAGCTATTTTGGATTCAA+TGG - chr3_1:72959235-72959254 None:intergenic 30.0%
! GACATCAATTACAGCTATTT+TGG - chr3_1:72959244-72959263 None:intergenic 30.0%
AATATCATCTAACAAGAAGC+TGG + chr3_1:72959278-72959297 Msa0373850:intron 30.0%
CAATTTGAAAGGAAAGTTCT+GGG + chr3_1:72959375-72959394 Msa0373850:CDS 30.0%
AATTTGAAAGGAAAGTTCTG+GGG + chr3_1:72959376-72959395 Msa0373850:CDS 30.0%
GTAGAATTGTGTATACAACT+TGG + chr3_1:72959616-72959635 Msa0373850:intron 30.0%
TAAAGCAGTGTTTGTTTGAT+TGG + chr3_1:72959816-72959835 Msa0373850:intron 30.0%
TACATTGACAATTACAACAG+CGG - chr3_1:72959944-72959963 None:intergenic 30.0%
TCGTCTCATTTATTTGTTCT+GGG + chr3_1:72960107-72960126 Msa0373850:intron 30.0%
AGAAGGTAGCAATGTTAATT+GGG + chr3_1:72960193-72960212 Msa0373850:CDS 30.0%
GAAGCAATGTATTATGTACT+CGG + chr3_1:72960225-72960244 Msa0373850:CDS 30.0%
AAGCAATGTATTATGTACTC+GGG + chr3_1:72960226-72960245 Msa0373850:CDS 30.0%
TGAAATAATGCCTGGTTTAT+TGG + chr3_1:72960368-72960387 Msa0373850:CDS 30.0%
! TTTTCTTTTCCCCCTTAAAT+TGG + chr3_1:72960601-72960620 Msa0373850:intron 30.0%
ACAAAAATGCCAATTTAAGG+GGG - chr3_1:72960613-72960632 None:intergenic 30.0%
GACAAAAATGCCAATTTAAG+GGG - chr3_1:72960614-72960633 None:intergenic 30.0%
CGACAAAAATGCCAATTTAA+GGG - chr3_1:72960615-72960634 None:intergenic 30.0%
TCGACAAAAATGCCAATTTA+AGG - chr3_1:72960616-72960635 None:intergenic 30.0%
ACTGTATCATCTTCAGAAAA+GGG - chr3_1:72960672-72960691 None:intergenic 30.0%
AACTGTATCATCTTCAGAAA+AGG - chr3_1:72960673-72960692 None:intergenic 30.0%
ACGTCGAATAATAAATGCAA+GGG - chr3_1:72960721-72960740 None:intergenic 30.0%
CACAAAATAGCATAAAGCTT+AGG - chr3_1:72960809-72960828 None:intergenic 30.0%
GATGGAATCTCTGATATATT+TGG + chr3_1:72961002-72961021 Msa0373850:CDS 30.0%
ATCTCTGATATATTTGGACA+AGG + chr3_1:72961008-72961027 Msa0373850:CDS 30.0%
!! GTTTTTGCTATATGTCCATT+TGG + chr3_1:72961101-72961120 Msa0373850:three_prime_UTR 30.0%
! TTTTAACGAGACATGAGTAT+TGG - chr3_1:72961272-72961291 None:intergenic 30.0%
AGTAGTAGAGTTATACAGAG+AGG + chr3_1:72954008-72954027 Msa0373850:five_prime_UTR 35.0%
! AGAGAGTATAGTGCCTTAAA+TGG + chr3_1:72954051-72954070 Msa0373850:five_prime_UTR 35.0%
TGCCTTAAATGGATGTATGT+AGG + chr3_1:72954062-72954081 Msa0373850:five_prime_UTR 35.0%
TGCCTACATACATCCATTTA+AGG - chr3_1:72954067-72954086 None:intergenic 35.0%
ATTGTTATGGCAGGCTATAA+AGG - chr3_1:72954101-72954120 None:intergenic 35.0%
! GTTGTTGTTATTGTTATGGC+AGG - chr3_1:72954110-72954129 None:intergenic 35.0%
!! AACGGTTGCGTTTTAATGAA+TGG - chr3_1:72954188-72954207 None:intergenic 35.0%
AGGATTCATTGATCACTCAT+CGG - chr3_1:72954295-72954314 None:intergenic 35.0%
TCAAACTCTCAGTGTCAATT+AGG + chr3_1:72954375-72954394 Msa0373850:five_prime_UTR 35.0%
CAAACTCTCAGTGTCAATTA+GGG + chr3_1:72954376-72954395 Msa0373850:five_prime_UTR 35.0%
GTTAGATTCATCGATCAGAA+CGG + chr3_1:72954398-72954417 Msa0373850:five_prime_UTR 35.0%
GAATCATGATGAAGATGATG+TGG + chr3_1:72954503-72954522 Msa0373850:five_prime_UTR 35.0%
CTTCAAATGTATCTCACCAA+AGG - chr3_1:72954829-72954848 None:intergenic 35.0%
CTTTGGTGAGATACATTTGA+AGG + chr3_1:72954827-72954846 Msa0373850:five_prime_UTR 35.0%
GATGCAAGTATGGAAGATTT+AGG + chr3_1:72955379-72955398 Msa0373850:intron 35.0%
GATAATACAAAGAAGAGGGT+TGG - chr3_1:72955485-72955504 None:intergenic 35.0%
AGAATATGGGTAAACAAGCA+AGG - chr3_1:72955743-72955762 None:intergenic 35.0%
GATCTGGGTTGTTGAAATAT+TGG + chr3_1:72955784-72955803 Msa0373850:intron 35.0%
TAATTAGATTTGGCACTCAC+GGG - chr3_1:72956004-72956023 None:intergenic 35.0%
! TGCAAAAGATCTTTTTCCCA+GGG + chr3_1:72956162-72956181 Msa0373850:five_prime_UTR 35.0%
GCAGAAACATGTTATGTTGT+TGG + chr3_1:72956351-72956370 Msa0373850:five_prime_UTR 35.0%
!! CAATACCTCCAGTTGTTTTA+AGG - chr3_1:72956380-72956399 None:intergenic 35.0%
TTCCCTTTCTTAACACAACT+CGG + chr3_1:72956403-72956422 Msa0373850:intron 35.0%
ATATGCATTTCTGTTGTGGA+TGG + chr3_1:72956447-72956466 Msa0373850:intron 35.0%
!! AAGATAATGGTTTTCTGACC+TGG + chr3_1:72956477-72956496 Msa0373850:intron 35.0%
!!! AATCACTTTTTTTGCGCGTT+TGG + chr3_1:72956506-72956525 Msa0373850:intron 35.0%
TTGAAATCTTAAGCCAGACT+AGG - chr3_1:72956557-72956576 None:intergenic 35.0%
ATAACCTAATGTTGGAAGCA+TGG + chr3_1:72956595-72956614 Msa0373850:intron 35.0%
TTCTTTCGTGAGACATTTCA+TGG + chr3_1:72956785-72956804 Msa0373850:intron 35.0%
TCAATGAAGTCCTACGTTTA+GGG - chr3_1:72956850-72956869 None:intergenic 35.0%
CAAGGGAATAGAAGATATAG+TGG + chr3_1:72957456-72957475 Msa0373850:five_prime_UTR 35.0%
ATACACAAGTGGTCAAATCA+AGG - chr3_1:72957706-72957725 None:intergenic 35.0%
TTCTATTCTGTTATGTCGGA+AGG + chr3_1:72957731-72957750 Msa0373850:five_prime_UTR 35.0%
GCTATCCTTATGTCAAAAGA+AGG + chr3_1:72957981-72958000 Msa0373850:five_prime_UTR 35.0%
!!! TTCTCTTTCTCTTTTGGTTC+TGG - chr3_1:72958016-72958035 None:intergenic 35.0%
! ACAGGTTTCTCTTTCTCTTT+TGG - chr3_1:72958022-72958041 None:intergenic 35.0%
AAAGAGAAAGAGAAACCTGT+TGG + chr3_1:72958022-72958041 Msa0373850:five_prime_UTR 35.0%
AATATTGGGAAGGATCTTTC+TGG + chr3_1:72958067-72958086 Msa0373850:five_prime_UTR 35.0%
!! AAACCTAGTTGATAGAGCAT+TGG + chr3_1:72958162-72958181 Msa0373850:five_prime_UTR 35.0%
ATTCCAATGCTCTATCAACT+AGG - chr3_1:72958168-72958187 None:intergenic 35.0%
!! TAGTTGATAGAGCATTGGAA+TGG + chr3_1:72958167-72958186 Msa0373850:five_prime_UTR 35.0%
!! AGTTGATAGAGCATTGGAAT+GGG + chr3_1:72958168-72958187 Msa0373850:five_prime_UTR 35.0%
TACCTTGACAAAATGAACCT+AGG - chr3_1:72958258-72958277 None:intergenic 35.0%
GAAAGCAATTCATTAGAGAG+AGG - chr3_1:72958526-72958545 None:intergenic 35.0%
AAACTGGCAAATCTTGACAA+TGG - chr3_1:72958554-72958573 None:intergenic 35.0%
ACTCAGATGAATTTCAACCA+TGG + chr3_1:72958702-72958721 Msa0373850:intron 35.0%
GATAAGACAACTGAAACAGT+AGG + chr3_1:72958938-72958957 Msa0373850:intron 35.0%
ACTGAAACAGTAGGGATTAA+TGG + chr3_1:72958947-72958966 Msa0373850:intron 35.0%
CTGAAACAGTAGGGATTAAT+GGG + chr3_1:72958948-72958967 Msa0373850:intron 35.0%
! GTTTTACTGTAAATGGTGCA+GGG + chr3_1:72958970-72958989 Msa0373850:intron 35.0%
! TTTTACTGTAAATGGTGCAG+GGG + chr3_1:72958971-72958990 Msa0373850:intron 35.0%
CCAGAACTTTCCTTTCAAAT+TGG - chr3_1:72959377-72959396 None:intergenic 35.0%
CCAATTTGAAAGGAAAGTTC+TGG + chr3_1:72959374-72959393 Msa0373850:CDS 35.0%
! ATTTGAAAGGAAAGTTCTGG+GGG + chr3_1:72959377-72959396 Msa0373850:CDS 35.0%
TTCTATTCAGTTAGATCCTG+TGG + chr3_1:72959402-72959421 Msa0373850:CDS 35.0%
TCTATTCAGTTAGATCCTGT+GGG + chr3_1:72959403-72959422 Msa0373850:CDS 35.0%
! ATTCTACCTGATGTGGATTA+CGG - chr3_1:72959603-72959622 None:intergenic 35.0%
ATACACAATTCTACCTGATG+TGG - chr3_1:72959610-72959629 None:intergenic 35.0%
TATGTTGGGAGATAAAGTAG+GGG - chr3_1:72959750-72959769 None:intergenic 35.0%
CTATGTTGGGAGATAAAGTA+GGG - chr3_1:72959751-72959770 None:intergenic 35.0%
ACTATGTTGGGAGATAAAGT+AGG - chr3_1:72959752-72959771 None:intergenic 35.0%
! CTTTTATGGTTGAGCTGTTA+GGG + chr3_1:72960011-72960030 Msa0373850:intron 35.0%
TGTTAGGGTTAGACTTTGTA+AGG + chr3_1:72960026-72960045 Msa0373850:intron 35.0%
! AATGAGACGACGCAAAATTT+TGG - chr3_1:72960097-72960116 None:intergenic 35.0%
GTCGTCTCATTTATTTGTTC+TGG + chr3_1:72960106-72960125 Msa0373850:intron 35.0%
TCATATATCAATCAGGTCCA+TGG + chr3_1:72960144-72960163 Msa0373850:intron 35.0%
CATATATCAATCAGGTCCAT+GGG + chr3_1:72960145-72960164 Msa0373850:intron 35.0%
TTTGTTCAAGACAACAGAAC+TGG + chr3_1:72960168-72960187 Msa0373850:CDS 35.0%
GAGAAGGTAGCAATGTTAAT+TGG + chr3_1:72960192-72960211 Msa0373850:CDS 35.0%
TAGCAATGTTAATTGGGAAG+TGG + chr3_1:72960199-72960218 Msa0373850:CDS 35.0%
AGCAATGTTAATTGGGAAGT+GGG + chr3_1:72960200-72960219 Msa0373850:CDS 35.0%
AGCAATGTATTATGTACTCG+GGG + chr3_1:72960227-72960246 Msa0373850:CDS 35.0%
GTCATAGGATCATAACCTTT+GGG - chr3_1:72960267-72960286 None:intergenic 35.0%
TGTCATAGGATCATAACCTT+TGG - chr3_1:72960268-72960287 None:intergenic 35.0%
AATAATGCAGCTTCTGTCAT+AGG - chr3_1:72960282-72960301 None:intergenic 35.0%
TCATTCAAGGAAATTGCGAA+GGG - chr3_1:72960351-72960370 None:intergenic 35.0%
TTCATTCAAGGAAATTGCGA+AGG - chr3_1:72960352-72960371 None:intergenic 35.0%
TCCTTGAATGAAATAATGCC+TGG + chr3_1:72960360-72960379 Msa0373850:CDS 35.0%
ACCAGGCATTATTTCATTCA+AGG - chr3_1:72960364-72960383 None:intergenic 35.0%
! TTTTCCAAATGTCTCTGATC+TGG - chr3_1:72960426-72960445 None:intergenic 35.0%
GATCAGAGACATTTGGAAAA+TGG + chr3_1:72960426-72960445 Msa0373850:CDS 35.0%
ATGCAAATGCAGAGAAACTA+AGG + chr3_1:72960460-72960479 Msa0373850:CDS 35.0%
ATCCAAACACACAGATTTGA+AGG - chr3_1:72960535-72960554 None:intergenic 35.0%
CAGCAACCTAGAAAAGAAAT+AGG - chr3_1:72960576-72960595 None:intergenic 35.0%
TTTAAGGGGGAAAAGAAAAC+TGG - chr3_1:72960600-72960619 None:intergenic 35.0%
TGTATCATCTTCAGAAAAGG+GGG - chr3_1:72960670-72960689 None:intergenic 35.0%
CTGTATCATCTTCAGAAAAG+GGG - chr3_1:72960671-72960690 None:intergenic 35.0%
GACGTCGAATAATAAATGCA+AGG - chr3_1:72960722-72960741 None:intergenic 35.0%
TGATAGTAAATCACCCAAGA+GGG - chr3_1:72960758-72960777 None:intergenic 35.0%
ATGATAGTAAATCACCCAAG+AGG - chr3_1:72960759-72960778 None:intergenic 35.0%
TCATCCTTCTTAAACCATCT+GGG - chr3_1:72960924-72960943 None:intergenic 35.0%
TTCATCCTTCTTAAACCATC+TGG - chr3_1:72960925-72960944 None:intergenic 35.0%
TGGTTTAAGAAGGATGAAGA+TGG + chr3_1:72960927-72960946 Msa0373850:CDS 35.0%
AGATGGTTCTTATCGATACA+TGG + chr3_1:72960944-72960963 Msa0373850:CDS 35.0%
GATGGTTCTTATCGATACAT+GGG + chr3_1:72960945-72960964 Msa0373850:CDS 35.0%
AGGCAAGAGAAAAGAACAAT+TGG + chr3_1:72960979-72960998 Msa0373850:CDS 35.0%
GGCAAGAGAAAAGAACAATT+GGG + chr3_1:72960980-72960999 Msa0373850:CDS 35.0%
AGAGAAAAGAACAATTGGGA+TGG + chr3_1:72960984-72961003 Msa0373850:CDS 35.0%
ACAATCTCTTCAGAACATGA+AGG - chr3_1:72961044-72961063 None:intergenic 35.0%
AAATGGATGTATGTAGGCAG+TGG + chr3_1:72954068-72954087 Msa0373850:five_prime_UTR 40.0%
TGATCAGAGTATAACAGTCG+CGG + chr3_1:72954257-72954276 Msa0373850:five_prime_UTR 40.0%
TTGACACTGAGAGTTTGACT+TGG - chr3_1:72954373-72954392 None:intergenic 40.0%
ACTCATGATTCATCGTTAGC+AGG + chr3_1:72954450-72954469 Msa0373850:five_prime_UTR 40.0%
CTCATGATTCATCGTTAGCA+GGG + chr3_1:72954451-72954470 Msa0373850:five_prime_UTR 40.0%
TCATGATTCATCGTTAGCAG+GGG + chr3_1:72954452-72954471 Msa0373850:five_prime_UTR 40.0%
TTCATCATGATTCAAACCCG+CGG - chr3_1:72954496-72954515 None:intergenic 40.0%
GAATGAAGTTCGTGATTCGA+AGG + chr3_1:72954527-72954546 Msa0373850:five_prime_UTR 40.0%
CTGTACAAGTGGGTGAATTA+CGG + chr3_1:72954591-72954610 Msa0373850:five_prime_UTR 40.0%
AAGTGGGTGAATTACGGTAA+GGG + chr3_1:72954597-72954616 Msa0373850:five_prime_UTR 40.0%
GGACTCATCAAGATCTTATC+CGG - chr3_1:72954684-72954703 None:intergenic 40.0%
!! TGCTAAGGATAGGAGTGTTA+GGG + chr3_1:72954704-72954723 Msa0373850:five_prime_UTR 40.0%
AGTTTGTGAAGAAGGCGAAT+TGG + chr3_1:72954748-72954767 Msa0373850:five_prime_UTR 40.0%
!! AATCGAGGTAATGGAGTAGT+TGG + chr3_1:72954777-72954796 Msa0373850:five_prime_UTR 40.0%
!! TGAAGTGCAATAATGGGTGA+AGG + chr3_1:72955051-72955070 Msa0373850:intron 40.0%
!! GAAGTGCAATAATGGGTGAA+GGG + chr3_1:72955052-72955071 Msa0373850:intron 40.0%
GTTGGTATGCTAATTAACGC+AGG + chr3_1:72955104-72955123 Msa0373850:intron 40.0%
GACTACGGTTGACTAACAAA+AGG - chr3_1:72955213-72955232 None:intergenic 40.0%
!! CAATTTTGGGAGGCAAGAAA+TGG + chr3_1:72955335-72955354 Msa0373850:intron 40.0%
TTTGGGAAAGGATGCAAGTA+TGG + chr3_1:72955369-72955388 Msa0373850:intron 40.0%
!! AGTTGGTGGTGTTCATTGTT+TGG + chr3_1:72955509-72955528 Msa0373850:intron 40.0%
TTAGTACTTGTCCCACCAAA+CGG - chr3_1:72955562-72955581 None:intergenic 40.0%
ATACATACTCTCTCTGTGGT+TGG + chr3_1:72955658-72955677 Msa0373850:intron 40.0%
AATACATCACTACTTGGCTG+TGG - chr3_1:72955700-72955719 None:intergenic 40.0%
GTAAACAAGCAAGGATGGTT+TGG - chr3_1:72955734-72955753 None:intergenic 40.0%
TATGGGTAAACAAGCAAGGA+TGG - chr3_1:72955739-72955758 None:intergenic 40.0%
GGACAAAAACTCTTCACTTG+AGG + chr3_1:72956092-72956111 Msa0373850:five_prime_UTR 40.0%
! AAGATCTTTTGCAGACTGCA+GGG - chr3_1:72956155-72956174 None:intergenic 40.0%
! AAAGATCTTTTGCAGACTGC+AGG - chr3_1:72956156-72956175 None:intergenic 40.0%
! CTGCAAAAGATCTTTTTCCC+AGG + chr3_1:72956161-72956180 Msa0373850:five_prime_UTR 40.0%
GTCGAAACTACGATATCTTC+TGG - chr3_1:72956214-72956233 None:intergenic 40.0%
TCGGAAGTCTCATATCTTCA+AGG + chr3_1:72956310-72956329 Msa0373850:five_prime_UTR 40.0%
GTTGGACACCTTAAAACAAC+TGG + chr3_1:72956369-72956388 Msa0373850:five_prime_UTR 40.0%
GTCCGAGTTGTGTTAAGAAA+GGG - chr3_1:72956408-72956427 None:intergenic 40.0%
AAAAAAGTGATTCTGCAGCC+AGG - chr3_1:72956498-72956517 None:intergenic 40.0%
CTCGTGTAGAATTGAAAGTC+GGG - chr3_1:72956636-72956655 None:intergenic 40.0%
GCTCGTGTAGAATTGAAAGT+CGG - chr3_1:72956637-72956656 None:intergenic 40.0%
ATATATGCTCATCCCTCATC+TGG + chr3_1:72956810-72956829 Msa0373850:intron 40.0%
AGAGGTAGTAATCCAGATGA+GGG - chr3_1:72956825-72956844 None:intergenic 40.0%
TAGAGGTAGTAATCCAGATG+AGG - chr3_1:72956826-72956845 None:intergenic 40.0%
GTCAATGAAGTCCTACGTTT+AGG - chr3_1:72956851-72956870 None:intergenic 40.0%
ACGGTCTTTAGTGATTGAGA+CGG + chr3_1:72957070-72957089 Msa0373850:intron 40.0%
CAAAGCGCAAGAATGCTAAA+GGG - chr3_1:72957204-72957223 None:intergenic 40.0%
TCAAAGCGCAAGAATGCTAA+AGG - chr3_1:72957205-72957224 None:intergenic 40.0%
!! CATTCTTGCGCTTTGATTTG+TGG + chr3_1:72957209-72957228 Msa0373850:intron 40.0%
GTGAGTCATATTGCACACAA+GGG + chr3_1:72957439-72957458 Msa0373850:five_prime_UTR 40.0%
AGAAGATATAGTGGTGAGTG+TGG + chr3_1:72957465-72957484 Msa0373850:intron 40.0%
GCTGAAACAGATGATGAAGA+TGG + chr3_1:72957803-72957822 Msa0373850:five_prime_UTR 40.0%
!! TCGATAGGAAGCACTTCTTA+AGG - chr3_1:72957867-72957886 None:intergenic 40.0%
TGTACCTTCTCTACTTCGAT+AGG - chr3_1:72957882-72957901 None:intergenic 40.0%
! TATCGAAGTAGAGAAGGTAC+AGG + chr3_1:72957881-72957900 Msa0373850:five_prime_UTR 40.0%
ATAATTGACCACAAGCCAAC+AGG - chr3_1:72958040-72958059 None:intergenic 40.0%
! CACTTTTGCAATGAAGAGAG+TGG - chr3_1:72958121-72958140 None:intergenic 40.0%
!! GTTGATAGAGCATTGGAATG+GGG + chr3_1:72958169-72958188 Msa0373850:five_prime_UTR 40.0%
! CTCCTAGGTTCATTTTGTCA+AGG + chr3_1:72958253-72958272 Msa0373850:five_prime_UTR 40.0%
! TTGATGGCCCTAATACTAGA+TGG - chr3_1:72958399-72958418 None:intergenic 40.0%
TCACTTCACTTTCAATCTCG+TGG - chr3_1:72958624-72958643 None:intergenic 40.0%
! TGCAAAGTGTCACTCATTGT+GGG - chr3_1:72958749-72958768 None:intergenic 40.0%
! TTGCAAAGTGTCACTCATTG+TGG - chr3_1:72958750-72958769 None:intergenic 40.0%
AAGATTCACTCATTGTTGGG+TGG + chr3_1:72958787-72958806 Msa0373850:intron 40.0%
! GGTTTTACTGTAAATGGTGC+AGG + chr3_1:72958969-72958988 Msa0373850:intron 40.0%
AAACCTTTCAATCCTCTGCT+TGG + chr3_1:72959069-72959088 Msa0373850:CDS 40.0%
AACCTTTCAATCCTCTGCTT+GGG + chr3_1:72959070-72959089 Msa0373850:CDS 40.0%
GAAGCTGACTATCCAGATAA+AGG + chr3_1:72959102-72959121 Msa0373850:CDS 40.0%
TTCACCATCCTCAAACTGTA+GGG - chr3_1:72959437-72959456 None:intergenic 40.0%
TTTCACCATCCTCAAACTGT+AGG - chr3_1:72959438-72959457 None:intergenic 40.0%
AGGATGGTGAAACATTTCAG+TGG + chr3_1:72959446-72959465 Msa0373850:CDS 40.0%
TGAAACATTTCAGTGGAGCA+AGG + chr3_1:72959453-72959472 Msa0373850:CDS 40.0%
TATGGTACCATGCACATCAA+GGG + chr3_1:72959526-72959545 Msa0373850:CDS 40.0%
CCTAACAGCTCAACCATAAA+AGG - chr3_1:72960013-72960032 None:intergenic 40.0%
! CCTTTTATGGTTGAGCTGTT+AGG + chr3_1:72960010-72960029 Msa0373850:intron 40.0%
GGGTTAGACTTTGTAAGGTA+AGG + chr3_1:72960031-72960050 Msa0373850:intron 40.0%
TGTTGTCTTGAACAAACCCA+TGG - chr3_1:72960164-72960183 None:intergenic 40.0%
! TAACCTTTGGGCTTTGTAGT+TGG - chr3_1:72960255-72960274 None:intergenic 40.0%
TGACAGAAGCTGCATTATTG+TGG + chr3_1:72960283-72960302 Msa0373850:CDS 40.0%
GACAGAAGCTGCATTATTGT+GGG + chr3_1:72960284-72960303 Msa0373850:CDS 40.0%
AGCTGCATTATTGTGGGAAA+AGG + chr3_1:72960290-72960309 Msa0373850:CDS 40.0%
AGAGGTTGTATCTTGTCTTG+GGG - chr3_1:72960326-72960345 None:intergenic 40.0%
GAGAGGTTGTATCTTGTCTT+GGG - chr3_1:72960327-72960346 None:intergenic 40.0%
AGAGAGGTTGTATCTTGTCT+TGG - chr3_1:72960328-72960347 None:intergenic 40.0%
AGGACAAAAAGCTGAGTTGT+AGG - chr3_1:72960515-72960534 None:intergenic 40.0%
GTCCTTCAAATCTGTGTGTT+TGG + chr3_1:72960530-72960549 Msa0373850:intron 40.0%
TATCATCTTCAGAAAAGGGG+GGG - chr3_1:72960668-72960687 None:intergenic 40.0%
GTATCATCTTCAGAAAAGGG+GGG - chr3_1:72960669-72960688 None:intergenic 40.0%
CTTCAATTTCTTGCCCTCTT+GGG + chr3_1:72960742-72960761 Msa0373850:intron 40.0%
TGCAATCTGTTCGCAGAATT+TGG + chr3_1:72960780-72960799 Msa0373850:intron 40.0%
GCAAGAAAGATGCAAGAAAG+AGG + chr3_1:72960891-72960910 Msa0373850:CDS 40.0%
GAAAGATGCAAGAAAGAGGA+TGG + chr3_1:72960895-72960914 Msa0373850:CDS 40.0%
GATTGTATCCTACTGAACAC+TGG + chr3_1:72961058-72961077 Msa0373850:exon 40.0%
AAGGAAAACCAGTGTTCAGT+AGG - chr3_1:72961069-72961088 None:intergenic 40.0%
!!! TGAACACTGGTTTTCCTTTG+TGG + chr3_1:72961071-72961090 Msa0373850:exon 40.0%
CTATATGTCCATTTGGACGT+AGG + chr3_1:72961108-72961127 Msa0373850:three_prime_UTR 40.0%
ACTTACAACCTACGTCCAAA+TGG - chr3_1:72961119-72961138 None:intergenic 40.0%
TGTCTCACATCTTCGCATAT+TGG + chr3_1:72961205-72961224 Msa0373850:three_prime_UTR 40.0%
GTCTCACATCTTCGCATATT+GGG + chr3_1:72961206-72961225 Msa0373850:three_prime_UTR 40.0%
TCTTTCACTGTGGAGAGAAG+TGG - chr3_1:72953833-72953852 None:intergenic 45.0%
GTAGAGTTATACAGAGAGGC+AGG + chr3_1:72954012-72954031 Msa0373850:five_prime_UTR 45.0%
AGAGTATAACAGTCGCGGAT+CGG + chr3_1:72954262-72954281 Msa0373850:five_prime_UTR 45.0%
TCCTTTATGCTGCATTGCTC+CGG + chr3_1:72954311-72954330 Msa0373850:five_prime_UTR 45.0%
TTCATCGTTAGCAGGGGATT+CGG + chr3_1:72954458-72954477 Msa0373850:five_prime_UTR 45.0%
!! CGTGATTCGAAGGTGTTGAA+TGG + chr3_1:72954537-72954556 Msa0373850:five_prime_UTR 45.0%
!! GATTCGAAGGTGTTGAATGG+TGG + chr3_1:72954540-72954559 Msa0373850:five_prime_UTR 45.0%
CAAGTGGGTGAATTACGGTA+AGG + chr3_1:72954596-72954615 Msa0373850:five_prime_UTR 45.0%
AGTGGGTGAATTACGGTAAG+GGG + chr3_1:72954598-72954617 Msa0373850:five_prime_UTR 45.0%
GATCTTGATGAGTCCTGCTA+AGG + chr3_1:72954689-72954708 Msa0373850:five_prime_UTR 45.0%
TGATGAGTCCTGCTAAGGAT+AGG + chr3_1:72954694-72954713 Msa0373850:five_prime_UTR 45.0%
CTAACACTCCTATCCTTAGC+AGG - chr3_1:72954705-72954724 None:intergenic 45.0%
!! CTGCTAAGGATAGGAGTGTT+AGG + chr3_1:72954703-72954722 Msa0373850:five_prime_UTR 45.0%
!! GATAGGAGTGTTAGGGTGAT+CGG + chr3_1:72954711-72954730 Msa0373850:five_prime_UTR 45.0%
TGGAACGTGAATCGAGGTAA+TGG + chr3_1:72954768-72954787 Msa0373850:five_prime_UTR 45.0%
ACTAAGCAATGCAAGCCCTT+TGG + chr3_1:72954810-72954829 Msa0373850:five_prime_UTR 45.0%
GAGGACTGGGATAATTTCGT+TGG + chr3_1:72955086-72955105 Msa0373850:intron 45.0%
! TGGTGGTGTTCATTGTTTGG+TGG + chr3_1:72955512-72955531 Msa0373850:intron 45.0%
GGTGGTGTTCATTGTTTGGT+GGG + chr3_1:72955513-72955532 Msa0373850:intron 45.0%
TAGTACTTGTCCCACCAAAC+GGG - chr3_1:72955561-72955580 None:intergenic 45.0%
ATACTCTCTCTGTGGTTGGA+TGG + chr3_1:72955662-72955681 Msa0373850:intron 45.0%
GATGTGGTTTCAGCAGCAAT+TGG - chr3_1:72955827-72955846 None:intergenic 45.0%
CTCACGGGAATTGATAAGCA+AGG - chr3_1:72955989-72956008 None:intergenic 45.0%
TCAGCAAGTCTGATGACAAG+CGG + chr3_1:72956053-72956072 Msa0373850:five_prime_UTR 45.0%
AAGCGGCTTTCCGTATTTAC+TGG + chr3_1:72956070-72956089 Msa0373850:five_prime_UTR 45.0%
AGCGGCTTTCCGTATTTACT+GGG + chr3_1:72956071-72956090 Msa0373850:five_prime_UTR 45.0%
CTGCGAGTCTATTATGCTCT+CGG + chr3_1:72956291-72956310 Msa0373850:five_prime_UTR 45.0%
GGACACCTTAAAACAACTGG+AGG + chr3_1:72956372-72956391 Msa0373850:five_prime_UTR 45.0%
GGTCCGAGTTGTGTTAAGAA+AGG - chr3_1:72956409-72956428 None:intergenic 45.0%
GACTCCATGCTTCCAACATT+AGG - chr3_1:72956602-72956621 None:intergenic 45.0%
! CACGAGCCTTCTAGTGTTTT+AGG + chr3_1:72956650-72956669 Msa0373850:intron 45.0%
CTACCTCTATCCCTAAACGT+AGG + chr3_1:72956837-72956856 Msa0373850:intron 45.0%
AGTCCTACGTTTAGGGATAG+AGG - chr3_1:72956843-72956862 None:intergenic 45.0%
GCGGGTCCTATAAAAAGAGA+CGG + chr3_1:72957051-72957070 Msa0373850:intron 45.0%
GCAGACGGAGAAAATAGAGT+TGG + chr3_1:72957386-72957405 Msa0373850:intron 45.0%
CGTGAGTCATATTGCACACA+AGG + chr3_1:72957438-72957457 Msa0373850:five_prime_UTR 45.0%
TTCAAGGCGAAAGACATGTC+AGG - chr3_1:72957500-72957519 None:intergenic 45.0%
GCTTCCTATCGAAGTAGAGA+AGG + chr3_1:72957875-72957894 Msa0373850:five_prime_UTR 45.0%
ATTCTCCATGATGGTTCGCA+TGG + chr3_1:72957932-72957951 Msa0373850:five_prime_UTR 45.0%
TTCTCCATGATGGTTCGCAT+GGG + chr3_1:72957933-72957952 Msa0373850:five_prime_UTR 45.0%
!! AAGAGAAACCTGTTGGCTTG+TGG + chr3_1:72958029-72958048 Msa0373850:five_prime_UTR 45.0%
CAACTAGGTTTGAGTACTCG+AGG - chr3_1:72958153-72958172 None:intergenic 45.0%
! GACAAAAGAAAGCACAGCTG+AGG - chr3_1:72958209-72958228 None:intergenic 45.0%
TGTCACTCATTGTGGGACAA+AGG - chr3_1:72958742-72958761 None:intergenic 45.0%
!! ACTGCTCTGAAAGCCTTTCT+TGG + chr3_1:72958852-72958871 Msa0373850:intron 45.0%
!! ATTGCAGCTTTTGCTGTGTC+CGG + chr3_1:72959018-72959037 Msa0373850:CDS 45.0%
ACCTTTCAATCCTCTGCTTG+GGG + chr3_1:72959071-72959090 Msa0373850:CDS 45.0%
! GCAGGTTAGTCATCATCCAA+TGG + chr3_1:72959303-72959322 Msa0373850:intron 45.0%
CAGTGACAAGCAACAACCAT+TGG - chr3_1:72959322-72959341 None:intergenic 45.0%
! GTTGTTGCTTGTCACTGTGA+GGG + chr3_1:72959325-72959344 Msa0373850:CDS 45.0%
TGGGCAGACTCCAATTTGAA+AGG + chr3_1:72959364-72959383 Msa0373850:CDS 45.0%
TGTTCTCACCCTACAGTTTG+AGG + chr3_1:72959426-72959445 Msa0373850:CDS 45.0%
TGATGTGCATGGTACCATAG+TGG - chr3_1:72959525-72959544 None:intergenic 45.0%
CTATGGTACCATGCACATCA+AGG + chr3_1:72959525-72959544 Msa0373850:CDS 45.0%
CATAGACCGTAATCCACATC+AGG + chr3_1:72959594-72959613 Msa0373850:CDS 45.0%
TTGGGAGATAAAGTAGGGGA+GGG - chr3_1:72959746-72959765 None:intergenic 45.0%
AGACAACAGAACTGGAGAGA+AGG + chr3_1:72960176-72960195 Msa0373850:CDS 45.0%
GATCCAACTACAAAGCCCAA+AGG + chr3_1:72960249-72960268 Msa0373850:CDS 45.0%
GGCAACTTCACCAATAAACC+AGG - chr3_1:72960381-72960400 None:intergenic 45.0%
GAGACCAGATCAGAGACATT+TGG + chr3_1:72960419-72960438 Msa0373850:CDS 45.0%
GCTTGAACAGTTACAGAGAC+AGG + chr3_1:72960482-72960501 Msa0373850:CDS 45.0%
ATCATCTTCAGAAAAGGGGG+GGG - chr3_1:72960667-72960686 None:intergenic 45.0%
CCAAGAGGGCAAGAAATTGA+AGG - chr3_1:72960744-72960763 None:intergenic 45.0%
CCTTCAATTTCTTGCCCTCT+TGG + chr3_1:72960741-72960760 Msa0373850:intron 45.0%
GGTTCTTATCGATACATGGG+TGG + chr3_1:72960948-72960967 Msa0373850:CDS 45.0%
ATCGATACATGGGTGGCTAT+TGG + chr3_1:72960955-72960974 Msa0373850:CDS 45.0%
TCGATACATGGGTGGCTATT+GGG + chr3_1:72960956-72960975 Msa0373850:CDS 45.0%
CAAAAACACGAGAGCCACAA+AGG - chr3_1:72961088-72961107 None:intergenic 45.0%
! TTTCTTCTGGCTGCGCATTT+CGG + chr3_1:72961176-72961195 Msa0373850:three_prime_UTR 45.0%
GAAAGATGTGACAGGTAGAG+AGG - chr3_1:72961300-72961319 None:intergenic 45.0%
!! AAAAAAAATGTAAAATAATT+AGG + chr3_1:72956985-72957004 Msa0373850:intron 5.0%
ACCGGAGCAATGCAGCATAA+AGG - chr3_1:72954315-72954334 None:intergenic 50.0%
!! GAGTTTGACTTGGACACCAC+CGG - chr3_1:72954363-72954382 None:intergenic 50.0%
TTCGGTGAAATCCTCTTCCG+CGG + chr3_1:72954476-72954495 Msa0373850:five_prime_UTR 50.0%
ATGATTCAAACCCGCGGAAG+AGG - chr3_1:72954490-72954509 None:intergenic 50.0%
!! TCGAAGGTGTTGAATGGTGG+TGG + chr3_1:72954543-72954562 Msa0373850:five_prime_UTR 50.0%
!! TTGAATGGTGGTGGTGTAGC+TGG + chr3_1:72954552-72954571 Msa0373850:five_prime_UTR 50.0%
TGAATTACGGTAAGGGGTGG+AGG + chr3_1:72954604-72954623 Msa0373850:five_prime_UTR 50.0%
! AGGTGGTTTGTGCTGGAAGA+TGG + chr3_1:72954630-72954649 Msa0373850:five_prime_UTR 50.0%
GTCGGCGAAGTTTGTGAAGA+AGG + chr3_1:72954740-72954759 Msa0373850:five_prime_UTR 50.0%
GCGAATTGGAACGTGAATCG+AGG + chr3_1:72954762-72954781 Msa0373850:five_prime_UTR 50.0%
!! CGAGGTAATGGAGTAGTTGG+AGG + chr3_1:72954780-72954799 Msa0373850:five_prime_UTR 50.0%
!! GGTAATGGAGTAGTTGGAGG+TGG + chr3_1:72954783-72954802 Msa0373850:five_prime_UTR 50.0%
!! ATAATGGGTGAAGGGCTGTG+AGG + chr3_1:72955060-72955079 Msa0373850:intron 50.0%
AGTACTTGTCCCACCAAACG+GGG - chr3_1:72955560-72955579 None:intergenic 50.0%
CTAGAGAAGACAGAGCCATG+TGG + chr3_1:72956122-72956141 Msa0373850:five_prime_UTR 50.0%
TATGCCTTCCTGCGACAATC+TGG - chr3_1:72956251-72956270 None:intergenic 50.0%
!! CAGACTAGGTGCTACTGCTA+GGG - chr3_1:72956543-72956562 None:intergenic 50.0%
CAAACCCATGCGAACCATCA+TGG - chr3_1:72957940-72957959 None:intergenic 50.0%
TGGTTCGCATGGGTTTGAGA+TGG + chr3_1:72957943-72957962 Msa0373850:five_prime_UTR 50.0%
! AGCATTGGAATGGGGAAAGC+AGG + chr3_1:72958177-72958196 Msa0373850:five_prime_UTR 50.0%
AGGTTTGCACTGTCGACCTT+CGG - chr3_1:72959055-72959074 None:intergenic 50.0%
TCCCCAAGCAGAGGATTGAA+AGG - chr3_1:72959075-72959094 None:intergenic 50.0%
TCATAAGTCTCCCCAAGCAG+AGG - chr3_1:72959084-72959103 None:intergenic 50.0%
TCTAACAAGAAGCTGGCTGC+AGG + chr3_1:72959285-72959304 Msa0373850:intron 50.0%
! GGTTGTTGCTTGTCACTGTG+AGG + chr3_1:72959324-72959343 Msa0373850:CDS 50.0%
AGGGAAGAGGATGGAAGTTC+TGG + chr3_1:72959344-72959363 Msa0373850:CDS 50.0%
GGGAAGAGGATGGAAGTTCT+GGG + chr3_1:72959345-72959364 Msa0373850:CDS 50.0%
CTCACCCTACAGTTTGAGGA+TGG + chr3_1:72959430-72959449 Msa0373850:CDS 50.0%
GTTGGGAGATAAAGTAGGGG+AGG - chr3_1:72959747-72959766 None:intergenic 50.0%
AGGAAATTGCGAAGGGAGAG+AGG - chr3_1:72960344-72960363 None:intergenic 50.0%
! AGTTGCCTCCAACTGACTCA+AGG + chr3_1:72960394-72960413 Msa0373850:CDS 50.0%
CTCAACCTTGAGTCAGTTGG+AGG - chr3_1:72960402-72960421 None:intergenic 50.0%
GGTCTCAACCTTGAGTCAGT+TGG - chr3_1:72960405-72960424 None:intergenic 50.0%
GCAGCCCAGATGGTTTAAGA+AGG + chr3_1:72960917-72960936 Msa0373850:CDS 50.0%
ATACATGGGTGGCTATTGGG+AGG + chr3_1:72960959-72960978 Msa0373850:CDS 50.0%
! TTCTTCTGGCTGCGCATTTC+GGG + chr3_1:72961177-72961196 Msa0373850:three_prime_UTR 50.0%
AGTGGCGAAGGAAGAGAGAG+AGG - chr3_1:72953815-72953834 None:intergenic 55.0%
ACTGTGGAGAGAAGTGGCGA+AGG - chr3_1:72953827-72953846 None:intergenic 55.0%
CGGTCTCGATCGATCGAAAC+CGG - chr3_1:72954333-72954352 None:intergenic 55.0%
CGGTTTCGATCGATCGAGAC+CGG + chr3_1:72954331-72954350 Msa0373850:five_prime_UTR 55.0%
TCGGTGAAATCCTCTTCCGC+GGG + chr3_1:72954477-72954496 Msa0373850:five_prime_UTR 55.0%
! TGGTGGTGTAGCTGGTAGTG+TGG + chr3_1:72954560-72954579 Msa0373850:five_prime_UTR 55.0%
! TGGTGTAGCTGGTAGTGTGG+CGG + chr3_1:72954563-72954582 Msa0373850:five_prime_UTR 55.0%
TGGCGGGGATACTGTACAAG+TGG + chr3_1:72954580-72954599 Msa0373850:five_prime_UTR 55.0%
GGCGGGGATACTGTACAAGT+GGG + chr3_1:72954581-72954600 Msa0373850:five_prime_UTR 55.0%
GGGTGAATTACGGTAAGGGG+TGG + chr3_1:72954601-72954620 Msa0373850:five_prime_UTR 55.0%
GAGTGTTAGGGTGATCGGTG+AGG + chr3_1:72954716-72954735 Msa0373850:five_prime_UTR 55.0%
TAGGGTGATCGGTGAGGAGT+CGG + chr3_1:72954722-72954741 Msa0373850:five_prime_UTR 55.0%
GTGAAGGGCTGTGAGGTAAG+AGG + chr3_1:72955067-72955086 Msa0373850:intron 55.0%
GGCTGTGAGGTAAGAGGACT+GGG + chr3_1:72955073-72955092 Msa0373850:intron 55.0%
CAAACGGGGAGAAGTGGAAG+GGG - chr3_1:72955546-72955565 None:intergenic 55.0%
CCAAACGGGGAGAAGTGGAA+GGG - chr3_1:72955547-72955566 None:intergenic 55.0%
ACCAAACGGGGAGAAGTGGA+AGG - chr3_1:72955548-72955567 None:intergenic 55.0%
TTCCACTTCTCCCCGTTTGG+TGG + chr3_1:72955547-72955566 Msa0373850:intron 55.0%
TCCACTTCTCCCCGTTTGGT+GGG + chr3_1:72955548-72955567 Msa0373850:intron 55.0%
CTGCAGGGCTTCAATCCACA+TGG - chr3_1:72956140-72956159 None:intergenic 55.0%
CGATCCAGATTGTCGCAGGA+AGG + chr3_1:72956244-72956263 Msa0373850:five_prime_UTR 55.0%
!! CCAGACTAGGTGCTACTGCT+AGG - chr3_1:72956544-72956563 None:intergenic 55.0%
CCTAGCAGTAGCACCTAGTC+TGG + chr3_1:72956541-72956560 Msa0373850:intron 55.0%
TGGAATGGGGAAAGCAGGTC+AGG + chr3_1:72958182-72958201 Msa0373850:five_prime_UTR 55.0%
TTTGCACTGTCGACCTTCGG+TGG - chr3_1:72959052-72959071 None:intergenic 55.0%
GCTTGTCACTGTGAGGGAAG+AGG + chr3_1:72959331-72959350 Msa0373850:CDS 55.0%
GTCACTGTGAGGGAAGAGGA+TGG + chr3_1:72959335-72959354 Msa0373850:CDS 55.0%
TGTAGGGTGAGAACACCCAC+AGG - chr3_1:72959421-72959440 None:intergenic 55.0%
ACCATGCACATCAAGGGCAG+CGG + chr3_1:72959532-72959551 Msa0373850:CDS 55.0%
AAAGAGGATGGCAGCCCAGA+TGG + chr3_1:72960907-72960926 Msa0373850:CDS 55.0%
! CGATCGAGACCGGAGTACTC+CGG + chr3_1:72954341-72954360 Msa0373850:five_prime_UTR 60.0%
! TGGACACCACCGGAGTACTC+CGG - chr3_1:72954353-72954372 None:intergenic 60.0%
! GGTGTAGCTGGTAGTGTGGC+GGG + chr3_1:72954564-72954583 Msa0373850:five_prime_UTR 60.0%
! GTGTAGCTGGTAGTGTGGCG+GGG + chr3_1:72954565-72954584 Msa0373850:five_prime_UTR 60.0%
! GAGGTCGAGGTGGTTTGTGC+TGG + chr3_1:72954623-72954642 Msa0373850:five_prime_UTR 60.0%
GGGCTGTGAGGTAAGAGGAC+TGG + chr3_1:72955072-72955091 Msa0373850:intron 60.0%
CCCTTCCACTTCTCCCCGTT+TGG + chr3_1:72955544-72955563 Msa0373850:intron 60.0%
TCCCACCAAACGGGGAGAAG+TGG - chr3_1:72955552-72955571 None:intergenic 60.0%
TCGCTGCTTGTCAGAGCCCT+GGG - chr3_1:72956181-72956200 None:intergenic 60.0%
ATCGCTGCTTGTCAGAGCCC+TGG - chr3_1:72956182-72956201 None:intergenic 60.0%
GCTGCGATCCAGATTGTCGC+AGG + chr3_1:72956240-72956259 Msa0373850:five_prime_UTR 60.0%
ACCTTCGGTGGACGCATAGC+CGG - chr3_1:72959040-72959059 None:intergenic 60.0%
TCCGCTGCCCTTGATGTGCA+TGG - chr3_1:72959536-72959555 None:intergenic 60.0%
! TCGAGACCGGAGTACTCCGG+TGG + chr3_1:72954344-72954363 Msa0373850:five_prime_UTR 65.0%
ACGGTAAGGGGTGGAGGTCG+AGG + chr3_1:72954610-72954629 Msa0373850:five_prime_UTR 65.0%
GTAAGGGGTGGAGGTCGAGG+TGG + chr3_1:72954613-72954632 Msa0373850:five_prime_UTR 65.0%
TCCGGCTATGCGTCCACCGA+AGG + chr3_1:72959036-72959055 Msa0373850:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 72953774 72961320 72953774 ID=Msa0373850;Name=Msa0373850
chr3_1 mRNA 72953774 72961320 72953774 ID=Msa0373850-mRNA-1;Parent=Msa0373850;Name=Msa0373850-mRNA-1;_AED=0.04;_eAED=0.04;_QI=2078|1|1|1|0.85|0.87|8|247|326
chr3_1 exon 72953774 72954848 72953774 ID=Msa0373850-mRNA-1:exon:16474;Parent=Msa0373850-mRNA-1
chr3_1 exon 72956037 72956393 72956037 ID=Msa0373850-mRNA-1:exon:16475;Parent=Msa0373850-mRNA-1
chr3_1 exon 72957390 72957477 72957390 ID=Msa0373850-mRNA-1:exon:16476;Parent=Msa0373850-mRNA-1
chr3_1 exon 72957729 72958274 72957729 ID=Msa0373850-mRNA-1:exon:16477;Parent=Msa0373850-mRNA-1
chr3_1 exon 72958991 72959146 72958991 ID=Msa0373850-mRNA-1:exon:16478;Parent=Msa0373850-mRNA-1
chr3_1 exon 72959307 72959615 72959307 ID=Msa0373850-mRNA-1:exon:16479;Parent=Msa0373850-mRNA-1
chr3_1 exon 72960159 72960503 72960159 ID=Msa0373850-mRNA-1:exon:16480;Parent=Msa0373850-mRNA-1
chr3_1 exon 72960891 72961320 72960891 ID=Msa0373850-mRNA-1:exon:16481;Parent=Msa0373850-mRNA-1
chr3_1 five_prime_UTR 72953774 72954848 72953774 ID=Msa0373850-mRNA-1:five_prime_utr;Parent=Msa0373850-mRNA-1
chr3_1 five_prime_UTR 72956037 72956393 72956037 ID=Msa0373850-mRNA-1:five_prime_utr;Parent=Msa0373850-mRNA-1
chr3_1 five_prime_UTR 72957390 72957477 72957390 ID=Msa0373850-mRNA-1:five_prime_utr;Parent=Msa0373850-mRNA-1
chr3_1 five_prime_UTR 72957729 72958274 72957729 ID=Msa0373850-mRNA-1:five_prime_utr;Parent=Msa0373850-mRNA-1
chr3_1 five_prime_UTR 72958991 72959002 72958991 ID=Msa0373850-mRNA-1:five_prime_utr;Parent=Msa0373850-mRNA-1
chr3_1 CDS 72959003 72959146 72959003 ID=Msa0373850-mRNA-1:cds;Parent=Msa0373850-mRNA-1
chr3_1 CDS 72959307 72959615 72959307 ID=Msa0373850-mRNA-1:cds;Parent=Msa0373850-mRNA-1
chr3_1 CDS 72960159 72960503 72960159 ID=Msa0373850-mRNA-1:cds;Parent=Msa0373850-mRNA-1
chr3_1 CDS 72960891 72961073 72960891 ID=Msa0373850-mRNA-1:cds;Parent=Msa0373850-mRNA-1
chr3_1 three_prime_UTR 72961074 72961320 72961074 ID=Msa0373850-mRNA-1:three_prime_utr;Parent=Msa0373850-mRNA-1
Gene Sequence

>Msa0373850

ATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCCGGCTATGCGTCCACCGAAGGTCGACAGTGCAAACCTTTCAATCCTCTGCTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGAGTTAAATTTTTTTCTGAGAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCAGACTCCAATTTGAAAGGAAAGTTCTGGGGGCGTTCTATTCAGTTAGATCCTGTGGGTGTTCTCACCCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACTACTTCCATATACAATATTATACTAGGTAAAATTTATTGTGACCACTATGGTACCATGCACATCAAGGGCAGCGGAAACTACTCTTGCAAACTTAAGTTCAAAGAGCAATCTATCATAGACCGTAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTATTATGTACTCGGGGATCCAACTACAAAGCCCAAAGGTTATGATCCTATGACAGAAGCTGCATTATTGTGGGAAAAGGACAACTATGTCCCCAAGACAAGATACAACCTCTCTCCCTTCGCAATTTCCTTGAATGAAATAATGCCTGGTTTATTGGTGAAGTTGCCTCCAACTGACTCAAGGTTGAGACCAGATCAGAGACATTTGGAAAATGGAGAGTATGAATATGCAAATGCAGAGAAACTAAGGCTTGAACAGTTACAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCCAGATGGTTTAAGAAGGATGAAGATGGTTCTTATCGATACATGGGTGGCTATTGGGAGGCAAGAGAAAAGAACAATTGGGATGGAATCTCTGATATATTTGGACAAGGCTGTGATTTGCCTTCATGTTCTGAAGAGATTGTATCCTACTGA
Protein sequence

>Msa0373850

MRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGVKFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWEKDNYVPKTRYNLSPFAISLNEIMPGLLVKLPPTDSRLRPDQRHLENGEYEYANAEKLRLEQLQRQARKMQERGWQPRWFKKDEDGSYRYMGGYWEAREKNNWDGISDIFGQGCDLPSCSEEIVSY*