AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0759650


Find 253 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr5_2 gene 15396337 15404461 15396337 ID=Msa0759650;Name=Msa0759650
chr5_2 mRNA 15396337 15404461 15396337 ID=Msa0759650-mRNA-1;Parent=Msa0759650;Name=Msa0759650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=345|0.95|0.95|1|0.95|0.91|23|312|1259
chr5_2 exon 15396337 15396841 15396337 ID=Msa0759650-mRNA-1:exon:7027;Parent=Msa0759650-mRNA-1
chr5_2 exon 15396926 15397197 15396926 ID=Msa0759650-mRNA-1:exon:7026;Parent=Msa0759650-mRNA-1
chr5_2 exon 15397296 15397493 15397296 ID=Msa0759650-mRNA-1:exon:7025;Parent=Msa0759650-mRNA-1
chr5_2 exon 15397586 15397681 15397586 ID=Msa0759650-mRNA-1:exon:7024;Parent=Msa0759650-mRNA-1
chr5_2 exon 15397855 15398037 15397855 ID=Msa0759650-mRNA-1:exon:7023;Parent=Msa0759650-mRNA-1
chr5_2 exon 15398197 15398381 15398197 ID=Msa0759650-mRNA-1:exon:7022;Parent=Msa0759650-mRNA-1
chr5_2 exon 15398481 15398607 15398481 ID=Msa0759650-mRNA-1:exon:7021;Parent=Msa0759650-mRNA-1
chr5_2 exon 15398705 15398899 15398705 ID=Msa0759650-mRNA-1:exon:7020;Parent=Msa0759650-mRNA-1
chr5_2 exon 15398996 15399136 15398996 ID=Msa0759650-mRNA-1:exon:7019;Parent=Msa0759650-mRNA-1
chr5_2 exon 15399238 15399342 15399238 ID=Msa0759650-mRNA-1:exon:7018;Parent=Msa0759650-mRNA-1
chr5_2 exon 15399436 15399600 15399436 ID=Msa0759650-mRNA-1:exon:7017;Parent=Msa0759650-mRNA-1
chr5_2 exon 15399701 15399901 15399701 ID=Msa0759650-mRNA-1:exon:7016;Parent=Msa0759650-mRNA-1
chr5_2 exon 15400034 15400180 15400034 ID=Msa0759650-mRNA-1:exon:7015;Parent=Msa0759650-mRNA-1
chr5_2 exon 15400308 15400460 15400308 ID=Msa0759650-mRNA-1:exon:7014;Parent=Msa0759650-mRNA-1
chr5_2 exon 15400531 15400633 15400531 ID=Msa0759650-mRNA-1:exon:7013;Parent=Msa0759650-mRNA-1
chr5_2 exon 15400793 15400908 15400793 ID=Msa0759650-mRNA-1:exon:7012;Parent=Msa0759650-mRNA-1
chr5_2 exon 15401232 15401413 15401232 ID=Msa0759650-mRNA-1:exon:7011;Parent=Msa0759650-mRNA-1
chr5_2 exon 15401500 15401927 15401500 ID=Msa0759650-mRNA-1:exon:7010;Parent=Msa0759650-mRNA-1
chr5_2 exon 15402068 15402294 15402068 ID=Msa0759650-mRNA-1:exon:7009;Parent=Msa0759650-mRNA-1
chr5_2 exon 15402370 15402501 15402370 ID=Msa0759650-mRNA-1:exon:7008;Parent=Msa0759650-mRNA-1
chr5_2 exon 15402702 15402774 15402702 ID=Msa0759650-mRNA-1:exon:7007;Parent=Msa0759650-mRNA-1
chr5_2 exon 15403537 15403765 15403537 ID=Msa0759650-mRNA-1:exon:7006;Parent=Msa0759650-mRNA-1
chr5_2 exon 15404188 15404461 15404188 ID=Msa0759650-mRNA-1:exon:7005;Parent=Msa0759650-mRNA-1
chr5_2 five_prime_UTR 15404188 15404461 15404188 ID=Msa0759650-mRNA-1:five_prime_utr;Parent=Msa0759650-mRNA-1
chr5_2 five_prime_UTR 15403695 15403765 15403695 ID=Msa0759650-mRNA-1:five_prime_utr;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15403537 15403694 15403537 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15402702 15402774 15402702 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15402370 15402501 15402370 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15402068 15402294 15402068 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15401500 15401927 15401500 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15401232 15401413 15401232 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15400793 15400908 15400793 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15400531 15400633 15400531 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15400308 15400460 15400308 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15400034 15400180 15400034 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15399701 15399901 15399701 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15399436 15399600 15399436 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15399238 15399342 15399238 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15398996 15399136 15398996 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15398705 15398899 15398705 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15398481 15398607 15398481 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15398197 15398381 15398197 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15397855 15398037 15397855 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15397586 15397681 15397586 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15397296 15397493 15397296 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15396926 15397197 15396926 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 CDS 15396649 15396841 15396649 ID=Msa0759650-mRNA-1:cds;Parent=Msa0759650-mRNA-1
chr5_2 three_prime_UTR 15396337 15396648 15396337 ID=Msa0759650-mRNA-1:three_prime_utr;Parent=Msa0759650-mRNA-1
Gene Sequence

>Msa0759650

ATGATATTTGATATGCCACCATCCGGCGCCCAAAGTGTGAGGACAAACAGATCTTCATTTGGTTCTATCAATGGTAGTGAGGGTACACCTTTACATAGCTATGCTACTGTTAGCAATGGCGATGGATATGACAGCGATGGCTCCAATTTCACACCAGCCACACCAACAACTCTATCAACGGCTATTCCAGCAGAACTCGCTGGAGCAGCACCTTTGATTGACAGATTTCAGGTGGAAGGTTTTTTAAAGTTGATGCAAAAACAAATTCACTCTGCCGGGAAGCGAGGATTTTTTTCTAAACGATCCGTGGGACCCCAAGTTCGAGAGAAACTTACAATCGAAGACATGCTTTGCTTCCAAAAGGATCCAATACCAACATCATTGCTTAAGCTGAATGGCGATTTGGCAAGCCGGGCAACAAAGTTGTTCCAAATGATTTTGAAGTATATGGGTGTTGATTCGTCTTCACTAAGCTTAGAGGACCGGGTTGAGCTTGTAGGTAAACTATACAAGCAAAGTTTGAAGCGTTCGGAACTCCGCGATGAACTTTTTGTGCAGATATCAAAACAAACAAGAAACAATCCGGAGAGGGAATACTTGATGAAATCATGGGAGCTAATGTATTTATGTGTGTCGTGCATGCCTCCAAGCAAAGACATTGGAGGATATCTGTCTGAATATACCCATAACGTGGCGCATGGCGTGGCTGTTGATTCTGGGATCCGAGGTGTTGCATTGAACACTTTAAATGCTTTGAAGCACTCTCTCAAGGCTGGTCCTAGGCATATAATACCCGGACCTGCTGAGATCGAAGCTCGGATGACTGGGAAAAAGCTCACAACTATAGTCTTCTTTCTGGATGAAACATTTGAAGAAATTACATATGACATGTCAACAACCGTAGCGGATGCTGTCGAGGAACTCGCAGGAATCATTAAACTTTCAACATACTCTAGCTTTGGCTTGTACGAATGCCGCAAAGTTGTCACAAGCGCTAAATCATCTGATTCTGGCAATGAGGAGTACATTGGTTTGGACGACAATAAACATATCGGGGATCTATTAGCGGAATTTAAGGCCGTAAAAGAACGAAGTAAGGGAGAAGTTTTGCACTGCAAACTGGTCTTCAAGAAAAAGTTATTTCGTGAATCGGATGAAGCTGTGACAGATCCTATGTTTTGGCAGTTGTCCTACGTACAATTGCAGCATGATTATATTTTGGGTAATTATCCCATTGGAAGGGAAGATGCATCGAAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCCGAATCATGCCCTGATTGGAATTCCTTTCTCGAGCGATTTCTTCCCAGGCAAATAGCAATGACTAGAGCTAGACGCGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGAGAATGTCACAAAAGATGATGCAAGACAACAGTTTCTGCATATAATAAGAACACTTCCTTATGGCTTTTCTGTATTTTTTAATGTTCGCAAAATTGATGATCCTATTGGACTCCTACCTGGACGAATAATACTAGCAATTAACAAGAGAGGGATTCATTTTTTTCGTCCCATTCCAAAGGAATATTTGCACTCAGCTGAATTGAGAGACATAATGCAATTTGGAAGCAGTAACACTGCTGTATTTTTTAAAATGCGAGTTGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCCCTTCAGACACACATAAATGATGTAATGCTGCGCCGATATTCCAAAACACGATCTTCTCCTACAGGTTCTTTGGATAAAGAAATTTCTACTGAATTTAAGTCTCCGAATATGGAATTGTATGAGAAACGCGTTCAAGATTTAACAAAAGCTGTTGAAGATTCTCAAAGGAAGGCGGATCAATTGATGGAAAAATTGCACGAGAAGCAAATACAAGAAGAGGAGACTCTCCAAGAATTAGAAGGCTTGAAAGAATCTTTAGAAACTTCCAAGAATAGTCTTGCAGAAGTTACGAATGACCGTGATAGGCTTACATCACTATGCAGTGAAAAAGATAATGAACTTCAGGCTAAAATGATAGAAAAAAGGAGCTTGGAAGCAAAGATAGCCAAGTTGAATAGTTTGATGATAGAGGGGATTACCAACAAGGACTCTATTGGAGCTAACGACCGAGCGTTGCAAAAGCTTGAAGATGACTTGAGACTTTGTAGAGATGAGCTTATGGCAGCTGAAGAGACCATCAAATGCTTGACAAATGAGAAGTTAGTTTTGAGACAAAAGATATCTGAGCTTGAGAAGAAGAATACTGAAGAGATTAATTATGTTCAACGAAAACTTGAACAAGAACGCAAAGCTCTGAACTCTCAAGTACATGGCCTTGAAAGAAAACTAGATGTGCTTAAACAAGAATTGGTTATGGCTGAATCTACACTTTTGGCGAAGGACTCTGAATTGGCTGTGTTGAGGAACAATTTAAAAGAACTAGAAGATTTGAGAGAAATGAAAGAGGACATTGACAGAAAGAATGAACAAACAGCTTCCATACTGAGGATGCAAGCGGCACAACTAGCTGACATGGAATCACTTTATAAGGAGGAGCAGGTTCTCAGAAAGCGATATTTCAATACCATAGAAGATATGAAAGGAAAAATACGAGTTTACTGTCGTCTAAGACCCCTTGGTGAAAAAGAGATTGCCGTGAATGAAAGAAAAGTTCTTACTTTTGTAGACGAGTTTACTGTTGAGCATCCATGGAAAGATGATAAAGCAAAGCAACACATATATGATTGCGTGTTTAACGGCAATGCAACTCAAGAAGAATACTTGGTGCAATCTGCTGTAGACGGTTATAATGTTTGCGTATTTGCCTATGGTCAAACTGGCTCTGGAAAGACGTTTACAATATATGGATCCGAAAACAATCCTGGCCTTACGCCACGTGCTACTACAGAGCTTTTTAGAATTTTAAGGAGAGATGGTAACAAGTTTTCTTTTTCCTTGAAGGCGTACATGTTGGAATTATATCAAGATACACTTGTAGATCTCTTGTTGCCGAAGAATGCAAAGCGATTAAAATTGGAGATTAAGAAGGACTCAAAGGGAATGGTAACGGTAGAAAACGCAACCACTGTGTCGATTTCCACCATGGAGGAATTGAATAGAATAATACAAAGGGGTTCGGAACGGCGGCATACAGCAGGGACACAAATGAATGAAGAAAGCTCAAGATCTCATCTTATACTATCAGTTGTAATCGAAAGTGTCAACCTTCAAAGCCAATCAACTGCAAGAGGAAAGCTGAGTTTTGTGGATCTTGCTGGCTCTGAAAGAATTAAAAAGTCAGGCTCTGAGGGTAGTCAATTGAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCACTTGGAGATGTTATTAGTGCTTTATCTTCAGGGGGTCAACACATACCTTACAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGAGGCAACGCCAAAACTCTCATGTTTGTGAATGTATCTCCAGTAGAATCAAGCTTGGATGAGACGCATAACTCTCTTATGTATGCGTCGCGTGTGAGGTCAATTGTGAATGATCCAAGTAAAAACATATCTTCGAAAGAGATCGCTCGACTGAAGAAATTGGTTGCTTATTGGAAGGAGCAAGCAGGTAGGAAAGGGGAGGATGAAGATTTAGAAGAAATTCAAGATAAACGACCAACTAAAGAGCGGAGCGATGGCCGCCATTCAATGTAG

Protein sequence

>Msa0759650

MIFDMPPSGAQSVRTNRSSFGSINGSEGTPLHSYATVSNGDGYDSDGSNFTPATPTTLSTAIPAELAGAAPLIDRFQVEGFLKLMQKQIHSAGKRGFFSKRSVGPQVREKLTIEDMLCFQKDPIPTSLLKLNGDLASRATKLFQMILKYMGVDSSSLSLEDRVELVGKLYKQSLKRSELRDELFVQISKQTRNNPEREYLMKSWELMYLCVSCMPPSKDIGGYLSEYTHNVAHGVAVDSGIRGVALNTLNALKHSLKAGPRHIIPGPAEIEARMTGKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFGLYECRKVVTSAKSSDSGNEEYIGLDDNKHIGDLLAEFKAVKERSKGEVLHCKLVFKKKLFRESDEAVTDPMFWQLSYVQLQHDYILGNYPIGREDASKLSALQILAEIGFVRRPESCPDWNSFLERFLPRQIAMTRARREWELDILSCYHSLENVTKDDARQQFLHIIRTLPYGFSVFFNVRKIDDPIGLLPGRIILAINKRGIHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSPTGSLDKEISTEFKSPNMELYEKRVQDLTKAVEDSQRKADQLMEKLHEKQIQEEETLQELEGLKESLETSKNSLAEVTNDRDRLTSLCSEKDNELQAKMIEKRSLEAKIAKLNSLMIEGITNKDSIGANDRALQKLEDDLRLCRDELMAAEETIKCLTNEKLVLRQKISELEKKNTEEINYVQRKLEQERKALNSQVHGLERKLDVLKQELVMAESTLLAKDSELAVLRNNLKELEDLREMKEDIDRKNEQTASILRMQAAQLADMESLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPLGEKEIAVNERKVLTFVDEFTVEHPWKDDKAKQHIYDCVFNGNATQEEYLVQSAVDGYNVCVFAYGQTGSGKTFTIYGSENNPGLTPRATTELFRILRRDGNKFSFSLKAYMLELYQDTLVDLLLPKNAKRLKLEIKKDSKGMVTVENATTVSISTMEELNRIIQRGSERRHTAGTQMNEESSRSHLILSVVIESVNLQSQSTARGKLSFVDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPSKNISSKEIARLKKLVAYWKEQAGRKGEDEDLEEIQDKRPTKERSDGRHSM*