Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374920 | XP_013461297.1 | 87.311 | 528 | 17 | 5 | 1 | 485 | 1 | 521 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374920 | sp|Q9SU08|AUXI1_ARATH | 71.505 | 186 | 50 | 2 | 302 | 484 | 718 | 903 | 1.32e-70 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374920 | A0A072V0L9 | 87.311 | 528 | 17 | 5 | 1 | 485 | 1 | 521 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374920 | Msa0808780 | 0.801863 | 7.367258e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374920 | MtrunA17_Chr3g0125121 | 87.311 | 528 | 17 | 5 | 1 | 485 | 1 | 521 | 0.0 | 795 |
| Msa0374920 | MtrunA17_Chr3g0130631 | 61.927 | 218 | 74 | 3 | 268 | 484 | 525 | 734 | 9.47e-81 | 265 |
| Msa0374920 | MtrunA17_Chr8g0384651 | 70.391 | 179 | 52 | 1 | 307 | 484 | 734 | 912 | 8.64e-80 | 266 |
| Msa0374920 | MtrunA17_Chr1g0155381 | 57.143 | 147 | 63 | 0 | 337 | 483 | 1221 | 1367 | 3.98e-53 | 193 |
| Msa0374920 | MtrunA17_Chr8g0372931 | 60.839 | 143 | 56 | 0 | 341 | 483 | 1296 | 1438 | 2.70e-51 | 187 |
| Msa0374920 | MtrunA17_Chr3g0141421 | 60.870 | 92 | 36 | 0 | 389 | 480 | 597 | 688 | 5.03e-33 | 132 |
| Msa0374920 | MtrunA17_Chr2g0321891 | 80.000 | 75 | 11 | 2 | 146 | 220 | 1 | 71 | 1.28e-29 | 111 |
| Msa0374920 | MtrunA17_Chr2g0304091 | 49.485 | 97 | 49 | 0 | 388 | 484 | 357 | 453 | 1.17e-26 | 112 |
| Msa0374920 | MtrunA17_Chr8g0376701 | 45.361 | 97 | 53 | 0 | 388 | 484 | 364 | 460 | 2.31e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374920 | AT1G21660.1 | 40.072 | 559 | 223 | 17 | 1 | 484 | 1 | 522 | 5.13e-101 | 313 |
| Msa0374920 | AT4G12770.2 | 74.269 | 171 | 44 | 0 | 314 | 484 | 718 | 888 | 4.04e-72 | 245 |
| Msa0374920 | AT4G12780.3 | 71.505 | 186 | 50 | 2 | 302 | 484 | 691 | 876 | 9.62e-72 | 244 |
| Msa0374920 | AT4G12780.1 | 71.505 | 186 | 50 | 2 | 302 | 484 | 718 | 903 | 1.34e-71 | 244 |
| Msa0374920 | AT4G12780.1 | 28.521 | 284 | 119 | 9 | 1 | 213 | 1 | 271 | 6.09e-11 | 65.5 |
| Msa0374920 | AT4G12770.1 | 73.410 | 173 | 44 | 1 | 314 | 484 | 718 | 890 | 2.80e-70 | 240 |
| Msa0374920 | AT4G12780.2 | 65.517 | 203 | 50 | 3 | 302 | 484 | 691 | 893 | 1.31e-67 | 233 |
| Msa0374920 | AT4G36520.1 | 59.873 | 157 | 63 | 0 | 326 | 482 | 1264 | 1420 | 5.26e-59 | 211 |
| Msa0374920 | AT1G75310.2 | 57.042 | 142 | 61 | 0 | 342 | 483 | 1309 | 1450 | 5.47e-50 | 184 |
| Msa0374920 | AT1G75310.1 | 57.042 | 142 | 61 | 0 | 342 | 483 | 1306 | 1447 | 5.62e-50 | 184 |
| Msa0374920 | AT1G75100.1 | 54.945 | 91 | 41 | 0 | 390 | 480 | 556 | 646 | 4.87e-29 | 121 |
| Msa0374920 | AT1G30280.1 | 43.956 | 91 | 50 | 1 | 394 | 483 | 361 | 451 | 2.89e-18 | 87.4 |
| Msa0374920 | AT1G30280.2 | 44.444 | 81 | 44 | 1 | 394 | 473 | 361 | 441 | 2.61e-15 | 78.6 |
| Msa0374920 | AT4G12780.5 | 28.521 | 284 | 119 | 9 | 1 | 213 | 1 | 271 | 7.90e-11 | 65.1 |
Find 169 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGGCTGCCGATGCCTTTC+TGG | 0.101969 | 3_1:+74460159 | None:intergenic |
| GACTTGCATGGTTACGGTTT+GGG | 0.174534 | 3_1:-74455483 | Msa0374920:three_prime_UTR |
| ACCAAAACTATACCCATTAT+TGG | 0.237607 | 3_1:+74459438 | None:intergenic |
| AGGGAAATAGATAGATAGAT+AGG | 0.290241 | 3_1:+74460025 | None:intergenic |
| TCTTTCTTCACTTCGCTGGC+TGG | 0.295985 | 3_1:+74460140 | None:intergenic |
| TGTGGGTGTGGATCGCTTTA+TGG | 0.310760 | 3_1:+74459831 | None:intergenic |
| GGAAGCAGCGTTTCCAATAA+TGG | 0.311319 | 3_1:-74459451 | Msa0374920:CDS |
| CGACTTGCATGGTTACGGTT+TGG | 0.314321 | 3_1:-74455484 | Msa0374920:three_prime_UTR |
| GATAACAAAACGCACCATTC+AGG | 0.319637 | 3_1:-74459739 | Msa0374920:CDS |
| TCATCTTTCGATTTCAATTA+CGG | 0.323381 | 3_1:-74459778 | Msa0374920:CDS |
| TTGGGAGGAGGCCTCAATAA+TGG | 0.324214 | 3_1:+74458281 | None:intergenic |
| CTTGCTCCAGCTTAGATTGA+AGG | 0.325859 | 3_1:+74456946 | None:intergenic |
| CAGGTTCTTTCGCCAGATTA+TGG | 0.332439 | 3_1:-74455963 | Msa0374920:CDS |
| TCCGTTGCCGACCTTGGATT+TGG | 0.334464 | 3_1:+74459687 | None:intergenic |
| GAACGGAAAATTGAGGTATA+AGG | 0.345750 | 3_1:+74459932 | None:intergenic |
| GCGGGAATAGAAAGTTAGTT+AGG | 0.351969 | 3_1:+74460005 | None:intergenic |
| CCAGATAAAGTCCAACAAAA+AGG | 0.364656 | 3_1:-74455858 | Msa0374920:CDS |
| TGGGAGGAGGCCTCAATAAT+GGG | 0.375175 | 3_1:+74458282 | None:intergenic |
| TTTGAAGCATTCACTGGCTT+GGG | 0.377988 | 3_1:+74458263 | None:intergenic |
| CGAAACTCCGTTGCCGACCT+TGG | 0.378093 | 3_1:+74459681 | None:intergenic |
| GAAGGTTTCTTCGGAATGGC+TGG | 0.383035 | 3_1:+74457548 | None:intergenic |
| ATCTTCTTTGTCGTCGTCGC+AGG | 0.385391 | 3_1:-74459623 | Msa0374920:CDS |
| CATTGGAGCTGATTTACCTT+GGG | 0.389633 | 3_1:+74459858 | None:intergenic |
| CTGGATCCGGCGGGAGGTGT+GGG | 0.394048 | 3_1:+74459814 | None:intergenic |
| CTTTCTTCACTTCGCTGGCT+GGG | 0.394444 | 3_1:+74460141 | None:intergenic |
| AGGCACTGACTAAACTGTTA+AGG | 0.396584 | 3_1:+74455270 | None:intergenic |
| GACGACTTCATGTCTGGGTT+TGG | 0.397805 | 3_1:-74459475 | Msa0374920:CDS |
| AGGTTCTTTCGCCAGATTAT+GGG | 0.397930 | 3_1:-74455962 | Msa0374920:CDS |
| AGCATCTTCAGAATCATTCC+TGG | 0.401814 | 3_1:-74458366 | Msa0374920:CDS |
| TGATGTTTGATATATCGTTT+TGG | 0.412298 | 3_1:-74455441 | Msa0374920:three_prime_UTR |
| AGATGAATGTTGAGGAGATC+TGG | 0.412353 | 3_1:+74459795 | None:intergenic |
| TCTTTCTTTCTTCACTTCGC+TGG | 0.412867 | 3_1:+74460136 | None:intergenic |
| CTATCCACCATGGACGAGTT+TGG | 0.414538 | 3_1:-74459910 | Msa0374920:exon |
| TCTGGATCCGGCGGGAGGTG+TGG | 0.418051 | 3_1:+74459813 | None:intergenic |
| TTTCTATTTGTGTCTGAGAA+TGG | 0.419099 | 3_1:+74460088 | None:intergenic |
| ACTGGTTGCCACCCATAATC+TGG | 0.421098 | 3_1:+74455951 | None:intergenic |
| GTTGAAACCGATCTGAATAT+CGG | 0.426816 | 3_1:+74459646 | None:intergenic |
| AATTGATTCACTCTTGCAGC+TGG | 0.430799 | 3_1:+74457995 | None:intergenic |
| CACAATTTGAGCAAGCCGAC+TGG | 0.431351 | 3_1:+74455242 | None:intergenic |
| ATAACAAAACGCACCATTCA+GGG | 0.434378 | 3_1:-74459738 | Msa0374920:CDS |
| CAGATAAAGAGGTGGGCTGC+AGG | 0.434678 | 3_1:-74456762 | Msa0374920:CDS |
| TTTGTAAATATAATGTGTCT+TGG | 0.439178 | 3_1:-74455092 | Msa0374920:three_prime_UTR |
| GTTTATGTAGATGATATATT+CGG | 0.439299 | 3_1:-74459601 | Msa0374920:CDS |
| AAGCTCTTCCGCATTGAACT+TGG | 0.439545 | 3_1:+74455550 | None:intergenic |
| GGGTTTCAATCCATATCGTT+CGG | 0.441847 | 3_1:+74459879 | None:intergenic |
| GTTTGAAGCATTCACTGGCT+TGG | 0.445456 | 3_1:+74458262 | None:intergenic |
| TCCGGCGGGAGGTGTGGGTG+TGG | 0.448399 | 3_1:+74459819 | None:intergenic |
| AGAAAGAAGAAAAGCAAGAC+TGG | 0.449547 | 3_1:-74457355 | Msa0374920:CDS |
| TTGGTATTTGCCTTTCTACT+AGG | 0.451459 | 3_1:+74458073 | None:intergenic |
| ATATGTTACATGGTGTCATT+TGG | 0.455112 | 3_1:-74455392 | Msa0374920:three_prime_UTR |
| GACGTGAATGAAGGTTTCTT+CGG | 0.457031 | 3_1:+74457539 | None:intergenic |
| ATCAACGACTTGCATGGTTA+CGG | 0.460478 | 3_1:-74455489 | Msa0374920:three_prime_UTR |
| TGATCTTGAATCAGGAAGCT+TGG | 0.461849 | 3_1:-74455574 | Msa0374920:intron |
| TTCCCAGTCATCTGAATTCG+AGG | 0.462997 | 3_1:-74457397 | Msa0374920:CDS |
| GATAGATAGATAGGGATGTA+AGG | 0.463342 | 3_1:+74460034 | None:intergenic |
| GGTGTATTGACCGAACGATA+TGG | 0.467055 | 3_1:-74459889 | Msa0374920:CDS |
| CACTCTACATATATGTTACA+TGG | 0.470915 | 3_1:-74455402 | Msa0374920:three_prime_UTR |
| GTCATCTGAATTCGAGGAAG+TGG | 0.471445 | 3_1:-74457391 | Msa0374920:CDS |
| CTTGAGTTTGAAGCATTCAC+TGG | 0.471626 | 3_1:+74458257 | None:intergenic |
| CTTCCTCGAATTCAGATGAC+TGG | 0.474156 | 3_1:+74457394 | None:intergenic |
| TTGAGGTATAAGGTAGGAAA+AGG | 0.474615 | 3_1:+74459942 | None:intergenic |
| GAAGCAGCGTTTCCAATAAT+GGG | 0.477407 | 3_1:-74459450 | Msa0374920:intron |
| AGTTCAATGCGGAAGAGCTT+CGG | 0.480697 | 3_1:-74455547 | Msa0374920:CDS |
| CCATTGGAGCTGATTTACCT+TGG | 0.482857 | 3_1:+74459857 | None:intergenic |
| AAGAGAAAGAGAAGAGAAGA+GGG | 0.483684 | 3_1:+74460111 | None:intergenic |
| GGAGCTCCTCTATCTTTGAC+TGG | 0.484196 | 3_1:+74458016 | None:intergenic |
| GCATTCACTGGCTTGGGAGG+AGG | 0.486058 | 3_1:+74458269 | None:intergenic |
| GGGTCACAAAGAGGACCATC+AGG | 0.497216 | 3_1:-74457575 | Msa0374920:CDS |
| GTTTACTTGGCGATCAAACA+TGG | 0.498830 | 3_1:+74457616 | None:intergenic |
| ATTACTCTGCACTCGGCCCT+TGG | 0.500917 | 3_1:+74458096 | None:intergenic |
| GATTTATTAAATAACATTGG+TGG | 0.504443 | 3_1:-74459547 | Msa0374920:CDS |
| GCTAAGCCAGTCAAAGATAG+AGG | 0.505318 | 3_1:-74458022 | Msa0374920:CDS |
| GACTTCATGTCTGGGTTTGG+TGG | 0.509835 | 3_1:-74459472 | Msa0374920:CDS |
| ACTTGCATGGTTACGGTTTG+GGG | 0.513624 | 3_1:-74455482 | Msa0374920:three_prime_UTR |
| AAGGTTTCTTCGGAATGGCT+GGG | 0.515244 | 3_1:+74457549 | None:intergenic |
| AACAGTAAAGTAAAACATGA+AGG | 0.515282 | 3_1:-74457596 | Msa0374920:CDS |
| TCATCATGTGGTGTGGCAGT+TGG | 0.518258 | 3_1:+74458422 | None:intergenic |
| GCGGGACCTTCAATCTAAGC+TGG | 0.518484 | 3_1:-74456952 | Msa0374920:CDS |
| CGGGAATAGAAAGTTAGTTA+GGG | 0.520893 | 3_1:+74460006 | None:intergenic |
| GATCGCTTTATGGAAGCCAT+TGG | 0.522093 | 3_1:+74459841 | None:intergenic |
| GGGAAATAGATAGATAGATA+GGG | 0.523208 | 3_1:+74460026 | None:intergenic |
| TTCGGTAGATCCATCTCTTG+AGG | 0.525450 | 3_1:-74455529 | Msa0374920:exon |
| GCAGAGTAATCCTAGTAGAA+AGG | 0.526412 | 3_1:-74458083 | Msa0374920:CDS |
| GAGGTGGGCTGCAGGGAAAG+AGG | 0.528167 | 3_1:-74456754 | Msa0374920:CDS |
| CTCGTCCATGGTGGATAGAA+CGG | 0.531762 | 3_1:+74459915 | None:intergenic |
| CAGTGGATGTTCAGATAAAG+AGG | 0.532700 | 3_1:-74456773 | Msa0374920:CDS |
| TCAAAAGATGACGTGAATGA+AGG | 0.533024 | 3_1:+74457530 | None:intergenic |
| TACTAGGATTACTCTGCACT+CGG | 0.536153 | 3_1:+74458089 | None:intergenic |
| GGATATGATCACTTCAGCTT+CGG | 0.538150 | 3_1:-74455919 | Msa0374920:CDS |
| TGATTTGCTCTAATGAGTCC+AGG | 0.540256 | 3_1:+74458348 | None:intergenic |
| ATCATATCCGTCAGAGACAC+TGG | 0.542046 | 3_1:+74455933 | None:intergenic |
| GAAGCATTCACTGGCTTGGG+AGG | 0.545711 | 3_1:+74458266 | None:intergenic |
| AGGTGGGCTGCAGGGAAAGA+GGG | 0.546331 | 3_1:-74456753 | Msa0374920:CDS |
| AGGTTTCTTCGGAATGGCTG+GGG | 0.547044 | 3_1:+74457550 | None:intergenic |
| CGCGTGGGATTGTGCGTGGT+TGG | 0.548161 | 3_1:-74460188 | Msa0374920:five_prime_UTR |
| GATGATTTATTAAATAACAT+TGG | 0.548821 | 3_1:-74459550 | Msa0374920:CDS |
| GAAGAGAAAGAGAAGAGAAG+AGG | 0.552129 | 3_1:+74460110 | None:intergenic |
| CCAAGGTAAATCAGCTCCAA+TGG | 0.552565 | 3_1:-74459857 | Msa0374920:CDS |
| TTGCTTAATCTCACCAGTGT+TGG | 0.554462 | 3_1:+74458054 | None:intergenic |
| GGAAAATTGAGGTATAAGGT+AGG | 0.557740 | 3_1:+74459936 | None:intergenic |
| ATTGGAGCTGATTTACCTTG+GGG | 0.559865 | 3_1:+74459859 | None:intergenic |
| GAATGAAGGTTTCTTCGGAA+TGG | 0.563477 | 3_1:+74457544 | None:intergenic |
| TTCTTTCGCCAGATTATGGG+TGG | 0.567485 | 3_1:-74455959 | Msa0374920:CDS |
| TATGTAGATGATATATTCGG+TGG | 0.568075 | 3_1:-74459598 | Msa0374920:CDS |
| TTCCTCGAATTCAGATGACT+GGG | 0.575128 | 3_1:+74457395 | None:intergenic |
| CGATGATCCGATATTCAGAT+CGG | 0.578567 | 3_1:-74459653 | Msa0374920:CDS |
| ACCAAATCCAAGGTCGGCAA+CGG | 0.579881 | 3_1:-74459688 | Msa0374920:CDS |
| CTCGTGAAAACCTCAAGAGA+TGG | 0.581872 | 3_1:+74455519 | None:intergenic |
| CGATATATCAAACATCAGCT+AGG | 0.582591 | 3_1:+74455447 | None:intergenic |
| GGCTTTGACGAGATCTTCGG+TGG | 0.583102 | 3_1:-74459715 | Msa0374920:CDS |
| CAAGCACCTCCCCATTATTG+AGG | 0.585812 | 3_1:-74458292 | Msa0374920:CDS |
| AGATAAAGAGGTGGGCTGCA+GGG | 0.586786 | 3_1:-74456761 | Msa0374920:CDS |
| TTGTGAGATGAAAATTGTTG+TGG | 0.591284 | 3_1:+74459983 | None:intergenic |
| CAATGGATCAACGACTTGCA+TGG | 0.591400 | 3_1:-74455495 | Msa0374920:three_prime_UTR |
| AGGGAAAGAGGGAAATATGC+GGG | 0.591488 | 3_1:-74456742 | Msa0374920:CDS |
| GCTTAGATTGAAGGTCCCGC+TGG | 0.594562 | 3_1:+74456955 | None:intergenic |
| AATAGTTCTAAACATACAAG+TGG | 0.599594 | 3_1:-74458320 | Msa0374920:CDS |
| AAATCGAAAGATGAATGTTG+AGG | 0.600329 | 3_1:+74459787 | None:intergenic |
| GGAATGGCTGGGGATCCTGA+TGG | 0.601112 | 3_1:+74457560 | None:intergenic |
| ATGTTGAGGAGATCTGGATC+CGG | 0.601174 | 3_1:+74459801 | None:intergenic |
| ACAGAAATATACCGCAGAGA+AGG | 0.601621 | 3_1:-74455823 | Msa0374920:CDS |
| AGAAAGGCAAATACCAACAC+TGG | 0.601737 | 3_1:-74458067 | Msa0374920:CDS |
| CAATACACCAAACTCGTCCA+TGG | 0.602742 | 3_1:+74459903 | None:intergenic |
| GGTCACTACCAGAAAGGCAT+CGG | 0.605658 | 3_1:-74460167 | Msa0374920:five_prime_UTR |
| GTGGATAGAACGGAAAATTG+AGG | 0.606053 | 3_1:+74459925 | None:intergenic |
| CTAGAGCATTCAATATCAGT+AGG | 0.607503 | 3_1:+74455354 | None:intergenic |
| CGGTGGAAACACCAAATCCA+AGG | 0.608260 | 3_1:-74459698 | Msa0374920:CDS |
| ACGATTTCAGTTGAAAGCGG+TGG | 0.609076 | 3_1:-74456988 | Msa0374920:intron |
| CGAGCTTGAGAACTTTGCCA+AGG | 0.609106 | 3_1:-74458113 | Msa0374920:CDS |
| GGTGGCTGATATGAACCAGC+GGG | 0.609741 | 3_1:-74456970 | Msa0374920:CDS |
| TCCACACCCACACCTCCCGC+CGG | 0.611078 | 3_1:-74459820 | Msa0374920:CDS |
| TAACAAAACGCACCATTCAG+GGG | 0.611586 | 3_1:-74459737 | Msa0374920:CDS |
| TTGAGGAGATCTGGATCCGG+CGG | 0.611837 | 3_1:+74459804 | None:intergenic |
| GAGCTTGAGAACTTTGCCAA+GGG | 0.614646 | 3_1:-74458112 | Msa0374920:CDS |
| GTCAGTGCCTAAAATCCAGT+CGG | 0.615911 | 3_1:-74455257 | Msa0374920:three_prime_UTR |
| ACAGTAAAGTAAAACATGAA+GGG | 0.616646 | 3_1:-74457595 | Msa0374920:CDS |
| GGAGATCTGGATCCGGCGGG+AGG | 0.617757 | 3_1:+74459808 | None:intergenic |
| TATCTGAACATCCACTGTGT+CGG | 0.622372 | 3_1:+74456779 | None:intergenic |
| TTTACTTGGCGATCAAACAT+GGG | 0.622536 | 3_1:+74457617 | None:intergenic |
| CGATATGGATTGAAACCCCA+AGG | 0.624158 | 3_1:-74459874 | Msa0374920:CDS |
| GTCACGATTTCAGTTGAAAG+CGG | 0.626611 | 3_1:-74456991 | Msa0374920:intron |
| GGATGTTCAGATAAAGAGGT+GGG | 0.628858 | 3_1:-74456769 | Msa0374920:CDS |
| GTGGTTGGTCACTACCAGAA+AGG | 0.629383 | 3_1:-74460173 | Msa0374920:five_prime_UTR |
| GGGAGGAGGCCTCAATAATG+GGG | 0.630680 | 3_1:+74458283 | None:intergenic |
| GAAAGAAGAAAAGCAAGACT+GGG | 0.630746 | 3_1:-74457354 | Msa0374920:CDS |
| TGAGGAGATCTGGATCCGGC+GGG | 0.632933 | 3_1:+74459805 | None:intergenic |
| TGAGATGAAAATTGTTGTGG+CGG | 0.633458 | 3_1:+74459986 | None:intergenic |
| TCTGAATTCGAGGAAGTGGA+AGG | 0.633809 | 3_1:-74457387 | Msa0374920:CDS |
| AAACATGAAGGGTCACAAAG+AGG | 0.637285 | 3_1:-74457584 | Msa0374920:CDS |
| GGAAACACCAAATCCAAGGT+CGG | 0.638017 | 3_1:-74459694 | Msa0374920:CDS |
| AAATAGAAAATACAAGCGAA+AGG | 0.638070 | 3_1:-74460074 | Msa0374920:five_prime_UTR |
| GGTGTGGCAGTTGGTTTCCG+AGG | 0.638479 | 3_1:+74458431 | None:intergenic |
| GCATTGAGAAGAATAATCCT+CGG | 0.640721 | 3_1:-74458448 | Msa0374920:CDS |
| GAGATGAAAATTGTTGTGGC+GGG | 0.643818 | 3_1:+74459987 | None:intergenic |
| CAATGATACTATAACCGCGT+GGG | 0.647326 | 3_1:-74460203 | Msa0374920:five_prime_UTR |
| TCAGAGAACACAAGAGAGAG+CGG | 0.655312 | 3_1:-74457325 | Msa0374920:intron |
| GTGGCAACCAGTGTCTCTGA+CGG | 0.655585 | 3_1:-74455940 | Msa0374920:CDS |
| TGGATGTTCAGATAAAGAGG+TGG | 0.657697 | 3_1:-74456770 | Msa0374920:CDS |
| AACAAAACGCACCATTCAGG+GGG | 0.659971 | 3_1:-74459736 | Msa0374920:CDS |
| TAACCGCGTGGGATTGTGCG+TGG | 0.683215 | 3_1:-74460192 | Msa0374920:five_prime_UTR |
| CGGTGGCTGATATGAACCAG+CGG | 0.684225 | 3_1:-74456971 | Msa0374920:CDS |
| TACACCAAACTCGTCCATGG+TGG | 0.684701 | 3_1:+74459906 | None:intergenic |
| AGGAGGCCTCAATAATGGGG+AGG | 0.685549 | 3_1:+74458286 | None:intergenic |
| CAGGGAAAGAGGGAAATATG+CGG | 0.691753 | 3_1:-74456743 | Msa0374920:CDS |
| AAATGGATCATCATGTGGTG+TGG | 0.706231 | 3_1:+74458415 | None:intergenic |
| GCAGCGGATAGCCGACACAG+TGG | 0.726459 | 3_1:-74456790 | Msa0374920:intron |
| GCAATGATACTATAACCGCG+TGG | 0.728633 | 3_1:-74460204 | Msa0374920:five_prime_UTR |
| AGCTTGGACCAAGTTCAATG+CGG | 0.751759 | 3_1:-74455558 | Msa0374920:CDS |
| CAACCACGCACAATCCCACG+CGG | 0.771834 | 3_1:+74460189 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTATTGATTTCTATAA+CGG | - | chr3_1:74457797-74457816 | Msa0374920:intron | 10.0% |
| !!! | TATATTTTAATAGTTTATTC+TGG | - | chr3_1:74458194-74458213 | Msa0374920:intron | 10.0% |
| !! | TTAAAAATTAACAACAATAA+TGG | + | chr3_1:74458590-74458609 | None:intergenic | 10.0% |
| !!! | ATATTTAGATTTTTTTTTAC+GGG | - | chr3_1:74460066-74460085 | Msa0374920:five_prime_UTR | 10.0% |
| !!! | ATGTAAGGTTTATATTTTAA+GGG | + | chr3_1:74455224-74455243 | None:intergenic | 15.0% |
| !! | GATGATTTATTAAATAACAT+TGG | - | chr3_1:74455720-74455739 | Msa0374920:intron | 15.0% |
| !! | ATTCTCCATAAAAAAAAAAA+AGG | + | chr3_1:74455866-74455885 | None:intergenic | 15.0% |
| !! | TTTCTGAATGTTTATTAATA+AGG | - | chr3_1:74457993-74458012 | Msa0374920:intron | 15.0% |
| !! | TTCTGAATGTTTATTAATAA+GGG | - | chr3_1:74457994-74458013 | Msa0374920:intron | 15.0% |
| !! | AGTATAAAACATTAAAGAAA+TGG | - | chr3_1:74458819-74458838 | Msa0374920:intron | 15.0% |
| !! | AATAATATACCATATCTAAA+TGG | - | chr3_1:74458853-74458872 | Msa0374920:intron | 15.0% |
| !! | TAAATAATTCCATTTAGATA+TGG | + | chr3_1:74458865-74458884 | None:intergenic | 15.0% |
| !! | GATAAATTATTATTTATCAG+AGG | + | chr3_1:74459240-74459259 | None:intergenic | 15.0% |
| !!! | TATTTAGATTTTTTTTTACG+GGG | - | chr3_1:74460067-74460086 | Msa0374920:five_prime_UTR | 15.0% |
| !!! | GATGTAAGGTTTATATTTTA+AGG | + | chr3_1:74455225-74455244 | None:intergenic | 20.0% |
| !! | GTTTATGTAGATGATATATT+CGG | - | chr3_1:74455669-74455688 | Msa0374920:intron | 20.0% |
| !! | GATTTATTAAATAACATTGG+TGG | - | chr3_1:74455723-74455742 | Msa0374920:intron | 20.0% |
| !!! | AAAATCATGCGATTTTTTTA+TGG | + | chr3_1:74455775-74455794 | None:intergenic | 20.0% |
| !! | TTCTTGATGTCAATATTATT+TGG | - | chr3_1:74456594-74456613 | Msa0374920:intron | 20.0% |
| !! | TCTTGATGTCAATATTATTT+GGG | - | chr3_1:74456595-74456614 | Msa0374920:intron | 20.0% |
| !!! | CTTTCTACTTAATTTTTAAG+TGG | - | chr3_1:74456634-74456653 | Msa0374920:intron | 20.0% |
| !! | GAAGTTTCAAATACTAAAAA+TGG | + | chr3_1:74456875-74456894 | None:intergenic | 20.0% |
| !! | ATATTAATAATTTCTACCAC+AGG | + | chr3_1:74457377-74457396 | None:intergenic | 20.0% |
| !! | ATTGTTTAAAGAATCAAAAG+AGG | + | chr3_1:74457529-74457548 | None:intergenic | 20.0% |
| !! | ATTCTTTAAACAATTCCATA+AGG | - | chr3_1:74457535-74457554 | Msa0374920:CDS | 20.0% |
| !! | TTCTTTAAACAATTCCATAA+GGG | - | chr3_1:74457536-74457555 | Msa0374920:CDS | 20.0% |
| !! | CAAAAAGAAAACAAAATGAT+AGG | + | chr3_1:74457843-74457862 | None:intergenic | 20.0% |
| !! | AATGTTTATTAATAAGGGAT+GGG | - | chr3_1:74457999-74458018 | Msa0374920:intron | 20.0% |
| !!! | TATATTGACATTATTTCTCA+TGG | - | chr3_1:74458235-74458254 | Msa0374920:intron | 20.0% |
| !!! | ATATTGACATTATTTCTCAT+GGG | - | chr3_1:74458236-74458255 | Msa0374920:intron | 20.0% |
| !! | TTAATGCTTAATTTCGATTT+AGG | - | chr3_1:74458606-74458625 | Msa0374920:intron | 20.0% |
| !! | CTTACTATCATATTGTTATA+AGG | - | chr3_1:74458671-74458690 | Msa0374920:intron | 20.0% |
| !! | TTACTAATATCTCATTTAAG+AGG | - | chr3_1:74459181-74459200 | Msa0374920:intron | 20.0% |
| !! | TTATTTATCAGAGGAAATAA+AGG | + | chr3_1:74459231-74459250 | None:intergenic | 20.0% |
| !! | TTGTATAAAACAAATGTTTC+AGG | + | chr3_1:74459262-74459281 | None:intergenic | 20.0% |
| !! | TTATCTTTGAATTTATATGC+AGG | - | chr3_1:74459288-74459307 | Msa0374920:intron | 20.0% |
| !! | GATTTCAAAATTATTTGACA+TGG | + | chr3_1:74459493-74459512 | None:intergenic | 20.0% |
| !! | TAATAGAACGGATAAAAAAA+GGG | + | chr3_1:74459520-74459539 | None:intergenic | 20.0% |
| !! | TTAATAGAACGGATAAAAAA+AGG | + | chr3_1:74459521-74459540 | None:intergenic | 20.0% |
| !! | TTATGCATATTACAATACAT+GGG | + | chr3_1:74459563-74459582 | None:intergenic | 20.0% |
| !! | ATTATGCATATTACAATACA+TGG | + | chr3_1:74459564-74459583 | None:intergenic | 20.0% |
| !! | TTATTATAATTCAATACCAG+AGG | + | chr3_1:74459644-74459663 | None:intergenic | 20.0% |
| !!! | TGGTATTGAATTATAATAAC+TGG | - | chr3_1:74459645-74459664 | Msa0374920:CDS | 20.0% |
| !!! | GGTATTGAATTATAATAACT+GGG | - | chr3_1:74459646-74459665 | Msa0374920:CDS | 20.0% |
| !! | TTTGTAAATATAATGTGTCT+TGG | - | chr3_1:74460178-74460197 | Msa0374920:five_prime_UTR | 20.0% |
| ! | AAATAGAAAATACAAGCGAA+AGG | - | chr3_1:74455196-74455215 | Msa0374920:three_prime_UTR | 25.0% |
| ! | TCATCTTTCGATTTCAATTA+CGG | - | chr3_1:74455492-74455511 | Msa0374920:three_prime_UTR | 25.0% |
| !!! | CAGCTCCTTTTTTTTTTTTA+TGG | - | chr3_1:74455858-74455877 | Msa0374920:CDS | 25.0% |
| !! | ACTTTTAATGCTTTAACCTT+AGG | + | chr3_1:74455914-74455933 | None:intergenic | 25.0% |
| !! | AGGTTAAAGCATTAAAAGTA+TGG | - | chr3_1:74455915-74455934 | Msa0374920:CDS | 25.0% |
| !! | GCATTAAAAGTATGGATTTA+AGG | - | chr3_1:74455923-74455942 | Msa0374920:CDS | 25.0% |
| ! | CATAGATGCCATAAATATAT+TGG | - | chr3_1:74456154-74456173 | Msa0374920:intron | 25.0% |
| ! | ATATGATGTAAACTCGTAAT+AGG | + | chr3_1:74456299-74456318 | None:intergenic | 25.0% |
| !!! | TGTTTTTAACACTTTGATGA+GGG | - | chr3_1:74456340-74456359 | Msa0374920:intron | 25.0% |
| !! | AAATTTAGATTCATTTTGCG+TGG | - | chr3_1:74456399-74456418 | Msa0374920:intron | 25.0% |
| !! | TGTTAGGTTAGTTATGAATT+TGG | - | chr3_1:74456448-74456467 | Msa0374920:intron | 25.0% |
| !!! | ATATGTTTTTTTTCTCTCTC+AGG | - | chr3_1:74456792-74456811 | Msa0374920:intron | 25.0% |
| !!! | AATAGTTCTAAACATACAAG+TGG | - | chr3_1:74456950-74456969 | Msa0374920:CDS | 25.0% |
| ! | CAGAGTCAATGATAAAAAAA+TGG | + | chr3_1:74457080-74457099 | None:intergenic | 25.0% |
| !!! | CATTTTTTTATCATTGACTC+TGG | - | chr3_1:74457078-74457097 | Msa0374920:intron | 25.0% |
| ! | TTGGTTAAGAAGTCAATAAA+AGG | - | chr3_1:74457430-74457449 | Msa0374920:intron | 25.0% |
| !! | GTTTTACTTTACTGTTTACT+TGG | + | chr3_1:74457670-74457689 | None:intergenic | 25.0% |
| ! | AACAGTAAAGTAAAACATGA+AGG | - | chr3_1:74457674-74457693 | Msa0374920:intron | 25.0% |
| ! | ACAGTAAAGTAAAACATGAA+GGG | - | chr3_1:74457675-74457694 | Msa0374920:intron | 25.0% |
| ! | GAATGTTTATTAATAAGGGA+TGG | - | chr3_1:74457998-74458017 | Msa0374920:intron | 25.0% |
| ! | TAATGATCTATACAAAGACT+TGG | - | chr3_1:74458119-74458138 | Msa0374920:CDS | 25.0% |
| ! | AAGAAGAAAAAAAAGAACTG+GGG | + | chr3_1:74458416-74458435 | None:intergenic | 25.0% |
| ! | GAAGAAGAAAAAAAAGAACT+GGG | + | chr3_1:74458417-74458436 | None:intergenic | 25.0% |
| ! | TGAAGAAGAAAAAAAAGAAC+TGG | + | chr3_1:74458418-74458437 | None:intergenic | 25.0% |
| !! | TTTGTCAAATTTTCTTAGTG+TGG | - | chr3_1:74458440-74458459 | Msa0374920:CDS | 25.0% |
| ! | GTTATAAGGTTTCATTGAAA+AGG | - | chr3_1:74458685-74458704 | Msa0374920:intron | 25.0% |
| ! | TAACAAAAGAAATGTATGGT+TGG | + | chr3_1:74459041-74459060 | None:intergenic | 25.0% |
| !! | ACCATACATTTCTTTTGTTA+AGG | - | chr3_1:74459041-74459060 | Msa0374920:intron | 25.0% |
| !! | CCATACATTTCTTTTGTTAA+GGG | - | chr3_1:74459042-74459061 | Msa0374920:intron | 25.0% |
| !! | CATACATTTCTTTTGTTAAG+GGG | - | chr3_1:74459043-74459062 | Msa0374920:intron | 25.0% |
| !! | ATACATTTCTTTTGTTAAGG+GGG | - | chr3_1:74459044-74459063 | Msa0374920:intron | 25.0% |
| ! | GCAATTTATTTATGGTTAAC+TGG | - | chr3_1:74459124-74459143 | Msa0374920:intron | 25.0% |
| ! | AATAGAACGGATAAAAAAAG+GGG | + | chr3_1:74459519-74459538 | None:intergenic | 25.0% |
| ! | AATTGTGACAGTTAATAGAA+CGG | + | chr3_1:74459532-74459551 | None:intergenic | 25.0% |
| !! | TGATGTTTGATATATCGTTT+TGG | - | chr3_1:74459829-74459848 | Msa0374920:CDS | 25.0% |
| TTTCTATTTGTGTCTGAGAA+TGG | + | chr3_1:74455185-74455204 | None:intergenic | 30.0% | |
| GGGAAATAGATAGATAGATA+GGG | + | chr3_1:74455247-74455266 | None:intergenic | 30.0% | |
| AGGGAAATAGATAGATAGAT+AGG | + | chr3_1:74455248-74455267 | None:intergenic | 30.0% | |
| TTGTGAGATGAAAATTGTTG+TGG | + | chr3_1:74455290-74455309 | None:intergenic | 30.0% | |
| AAATCGAAAGATGAATGTTG+AGG | + | chr3_1:74455486-74455505 | None:intergenic | 30.0% | |
| TATGTAGATGATATATTCGG+TGG | - | chr3_1:74455672-74455691 | Msa0374920:intron | 30.0% | |
| !!! | TCCAATAATGGGTATAGTTT+TGG | - | chr3_1:74455831-74455850 | Msa0374920:CDS | 30.0% |
| ACCAAAACTATACCCATTAT+TGG | + | chr3_1:74455835-74455854 | None:intergenic | 30.0% | |
| GTTACAGAGAATTTATCCTA+AGG | - | chr3_1:74455895-74455914 | Msa0374920:CDS | 30.0% | |
| AAGAAAACCATTGTGTAAGT+AGG | - | chr3_1:74456077-74456096 | Msa0374920:intron | 30.0% | |
| CTAATATCCTACTTACACAA+TGG | + | chr3_1:74456087-74456106 | None:intergenic | 30.0% | |
| AAAACATGAGAATATAGTCG+AGG | + | chr3_1:74456180-74456199 | None:intergenic | 30.0% | |
| ! | TCGACTATATTCTCATGTTT+TGG | - | chr3_1:74456179-74456198 | Msa0374920:intron | 30.0% |
| !! | CTATATTCTCATGTTTTGGA+AGG | - | chr3_1:74456183-74456202 | Msa0374920:intron | 30.0% |
| ! | TAAGTAAACTCGTTTTGTCT+AGG | - | chr3_1:74456252-74456271 | Msa0374920:intron | 30.0% |
| !! | GTGTTTTTAACACTTTGATG+AGG | - | chr3_1:74456339-74456358 | Msa0374920:intron | 30.0% |
| TGGGATAACTATACTTTGTT+AGG | - | chr3_1:74456432-74456451 | Msa0374920:intron | 30.0% | |
| TCTGAGTATGTGTAGAAATT+TGG | - | chr3_1:74456514-74456533 | Msa0374920:intron | 30.0% | |
| ACTAAAAATGGATCATCATG+TGG | + | chr3_1:74456863-74456882 | None:intergenic | 30.0% | |
| GCAAGAGTGAATCAATTAAA+TGG | - | chr3_1:74457281-74457300 | Msa0374920:intron | 30.0% | |
| CTTCTTAACCAATGTTCTTA+AGG | + | chr3_1:74457422-74457441 | None:intergenic | 30.0% | |
| CAAAAGAGGTCAGTTTATAT+GGG | + | chr3_1:74457515-74457534 | None:intergenic | 30.0% | |
| TCAAAAGAGGTCAGTTTATA+TGG | + | chr3_1:74457516-74457535 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTGATGCATTTCGT+AGG | - | chr3_1:74457628-74457647 | Msa0374920:intron | 30.0% |
| TAATAGTTTATTCTGGACAC+TGG | - | chr3_1:74458201-74458220 | Msa0374920:intron | 30.0% | |
| TGGATTGTGATTTATCTCTA+AGG | - | chr3_1:74458371-74458390 | Msa0374920:CDS | 30.0% | |
| !!! | TGTGGCGTTTGATTTTAATT+TGG | - | chr3_1:74458458-74458477 | Msa0374920:CDS | 30.0% |
| !!! | GTTTGATTTTAATTTGGCAG+CGG | - | chr3_1:74458464-74458483 | Msa0374920:intron | 30.0% |
| TGTCATCATTGCAAAATGTA+AGG | - | chr3_1:74458557-74458576 | Msa0374920:intron | 30.0% | |
| ATCAAACGACAGTGTTAAAT+CGG | + | chr3_1:74458644-74458663 | None:intergenic | 30.0% | |
| ! | TTTAACACTGTCGTTTGATT+AGG | - | chr3_1:74458645-74458664 | Msa0374920:intron | 30.0% |
| AGGTTTCATTGAAAAGGAAA+TGG | - | chr3_1:74458691-74458710 | Msa0374920:intron | 30.0% | |
| AAATGTATGGTTGGAATTGA+CGG | + | chr3_1:74459032-74459051 | None:intergenic | 30.0% | |
| CCCTTAACAAAAGAAATGTA+TGG | + | chr3_1:74459045-74459064 | None:intergenic | 30.0% | |
| ! | TACATTTCTTTTGTTAAGGG+GGG | - | chr3_1:74459045-74459064 | Msa0374920:intron | 30.0% |
| !! | GTAATGACTGAGTTTTATCA+AGG | + | chr3_1:74459159-74459178 | None:intergenic | 30.0% |
| TATCTCATTTAAGAGGAAGA+TGG | - | chr3_1:74459188-74459207 | Msa0374920:intron | 30.0% | |
| GAAATAAAGGACCAGTAAAA+AGG | + | chr3_1:74459218-74459237 | None:intergenic | 30.0% | |
| ! | CTTTTTGTTGGACTTTATCT+GGG | + | chr3_1:74459414-74459433 | None:intergenic | 30.0% |
| TTATTTGACATGGTACCTTA+AGG | + | chr3_1:74459483-74459502 | None:intergenic | 30.0% | |
| AACCTTAACATATAATCCTC+TGG | - | chr3_1:74459625-74459644 | Msa0374920:CDS | 30.0% | |
| TACCAGAGGATTATATGTTA+AGG | + | chr3_1:74459630-74459649 | None:intergenic | 30.0% | |
| TATTCTTCTGATCTTGAATC+AGG | - | chr3_1:74459688-74459707 | Msa0374920:CDS | 30.0% | |
| CACTCTACATATATGTTACA+TGG | - | chr3_1:74459868-74459887 | Msa0374920:CDS | 30.0% | |
| !! | ATATGTTACATGGTGTCATT+TGG | - | chr3_1:74459878-74459897 | Msa0374920:CDS | 30.0% |
| AAGAGAAAGAGAAGAGAAGA+GGG | + | chr3_1:74455162-74455181 | None:intergenic | 35.0% | |
| GATAGATAGATAGGGATGTA+AGG | + | chr3_1:74455239-74455258 | None:intergenic | 35.0% | |
| CGGGAATAGAAAGTTAGTTA+GGG | + | chr3_1:74455267-74455286 | None:intergenic | 35.0% | |
| TGAGATGAAAATTGTTGTGG+CGG | + | chr3_1:74455287-74455306 | None:intergenic | 35.0% | |
| TTGAGGTATAAGGTAGGAAA+AGG | + | chr3_1:74455331-74455350 | None:intergenic | 35.0% | |
| GGAAAATTGAGGTATAAGGT+AGG | + | chr3_1:74455337-74455356 | None:intergenic | 35.0% | |
| GAACGGAAAATTGAGGTATA+AGG | + | chr3_1:74455341-74455360 | None:intergenic | 35.0% | |
| !! | TGAATGGTGCGTTTTGTTAT+CGG | + | chr3_1:74455532-74455551 | None:intergenic | 35.0% |
| ATAACAAAACGCACCATTCA+GGG | - | chr3_1:74455532-74455551 | Msa0374920:exon | 35.0% | |
| GTTGAAACCGATCTGAATAT+CGG | + | chr3_1:74455627-74455646 | None:intergenic | 35.0% | |
| GGAGTCAATCAAAAAACTGT+CGG | - | chr3_1:74455693-74455712 | Msa0374920:intron | 35.0% | |
| !! | ATTTTGACGACTTCATGTCT+GGG | - | chr3_1:74455790-74455809 | Msa0374920:intron | 35.0% |
| ACAACATCCAAATGCTTACT+AGG | + | chr3_1:74456048-74456067 | None:intergenic | 35.0% | |
| AGTCGAGGCCAATATATTTA+TGG | + | chr3_1:74456165-74456184 | None:intergenic | 35.0% | |
| ! | TTTGAGATTGATGACATGCA+AGG | - | chr3_1:74456211-74456230 | Msa0374920:intron | 35.0% |
| ! | TTTTGCGTGGCTCATATTTT+TGG | - | chr3_1:74456412-74456431 | Msa0374920:intron | 35.0% |
| ! | TTTGCGTGGCTCATATTTTT+GGG | - | chr3_1:74456413-74456432 | Msa0374920:intron | 35.0% |
| ! | GATGCATGAACTACTCTTTT+TGG | - | chr3_1:74456536-74456555 | Msa0374920:intron | 35.0% |
| GATGACGACGATCAATAAAA+AGG | + | chr3_1:74456746-74456765 | None:intergenic | 35.0% | |
| GCATTGAGAAGAATAATCCT+CGG | - | chr3_1:74456822-74456841 | Msa0374920:intron | 35.0% | |
| TTGGTATTTGCCTTTCTACT+AGG | + | chr3_1:74457200-74457219 | None:intergenic | 35.0% | |
| !!! | TCTTGAATCCTTTTTCAGCA+TGG | - | chr3_1:74457313-74457332 | Msa0374920:intron | 35.0% |
| !!! | CTTGAATCCTTTTTCAGCAT+GGG | - | chr3_1:74457314-74457333 | Msa0374920:intron | 35.0% |
| GGTCAGTTTATATGGGAAAA+TGG | + | chr3_1:74457508-74457527 | None:intergenic | 35.0% | |
| TGGCGTTTGATATCATCATA+TGG | + | chr3_1:74457578-74457597 | None:intergenic | 35.0% | |
| ATAGTCTTTCAGTGTAGCAA+TGG | + | chr3_1:74457598-74457617 | None:intergenic | 35.0% | |
| TTTACTTGGCGATCAAACAT+GGG | + | chr3_1:74457656-74457675 | None:intergenic | 35.0% | |
| TCAAAAGATGACGTGAATGA+AGG | + | chr3_1:74457743-74457762 | None:intergenic | 35.0% | |
| AGAAAGAAGAAAAGCAAGAC+TGG | - | chr3_1:74457915-74457934 | Msa0374920:intron | 35.0% | |
| GAAAGAAGAAAAGCAAGACT+GGG | - | chr3_1:74457916-74457935 | Msa0374920:intron | 35.0% | |
| ! | GAGACGAGTAAGTTTTTGTT+TGG | - | chr3_1:74458351-74458370 | Msa0374920:CDS | 35.0% |
| GAAAAGGAAATGGAAACATC+AGG | - | chr3_1:74458701-74458720 | Msa0374920:intron | 35.0% | |
| ! | AATGGAAACATCAGGTTGTT+TGG | - | chr3_1:74458709-74458728 | Msa0374920:intron | 35.0% |
| !! | TAGCTCTCACTTTTAATGCT+TGG | - | chr3_1:74458774-74458793 | Msa0374920:intron | 35.0% |
| !! | AGCTCTCACTTTTAATGCTT+GGG | - | chr3_1:74458775-74458794 | Msa0374920:intron | 35.0% |
| TGCAATTGTGTGAAAGAACT+TGG | - | chr3_1:74458949-74458968 | Msa0374920:intron | 35.0% | |
| AATGTATGGTTGGAATTGAC+GGG | + | chr3_1:74459031-74459050 | None:intergenic | 35.0% | |
| ! | ACATTTCTTTTGTTAAGGGG+GGG | - | chr3_1:74459046-74459065 | Msa0374920:intron | 35.0% |
| GCGTCTGTGCAATTTATTTA+TGG | - | chr3_1:74459116-74459135 | Msa0374920:intron | 35.0% | |
| ! | CTTCGGTGAAAAAAGTGTAT+AGG | - | chr3_1:74459368-74459387 | Msa0374920:intron | 35.0% |
| ! | CCTTTTTGTTGGACTTTATC+TGG | + | chr3_1:74459415-74459434 | None:intergenic | 35.0% |
| CCAGATAAAGTCCAACAAAA+AGG | - | chr3_1:74459412-74459431 | Msa0374920:intron | 35.0% | |
| ! | CAAGATTAGCACCTTTTTGT+TGG | + | chr3_1:74459426-74459445 | None:intergenic | 35.0% |
| ! | GAAGGTTTTTGACATCCTTA+AGG | - | chr3_1:74459465-74459484 | Msa0374920:CDS | 35.0% |
| CATATTACAATACATGGGTG+TGG | + | chr3_1:74459558-74459577 | None:intergenic | 35.0% | |
| CGATATATCAAACATCAGCT+AGG | + | chr3_1:74459826-74459845 | None:intergenic | 35.0% | |
| ! | CTAGAGCATTCAATATCAGT+AGG | + | chr3_1:74459919-74459938 | None:intergenic | 35.0% |
| CAATGATACTATAACCGCGT+GGG | - | chr3_1:74455067-74455086 | Msa0374920:three_prime_UTR | 40.0% | |
| TCTTTCTTTCTTCACTTCGC+TGG | + | chr3_1:74455137-74455156 | None:intergenic | 40.0% | |
| GAAGAGAAAGAGAAGAGAAG+AGG | + | chr3_1:74455163-74455182 | None:intergenic | 40.0% | |
| GCGGGAATAGAAAGTTAGTT+AGG | + | chr3_1:74455268-74455287 | None:intergenic | 40.0% | |
| GAGATGAAAATTGTTGTGGC+GGG | + | chr3_1:74455286-74455305 | None:intergenic | 40.0% | |
| GTGGATAGAACGGAAAATTG+AGG | + | chr3_1:74455348-74455367 | None:intergenic | 40.0% | |
| ! | ATTTTCCGTTCTATCCACCA+TGG | - | chr3_1:74455350-74455369 | Msa0374920:three_prime_UTR | 40.0% |
| GGGTTTCAATCCATATCGTT+CGG | + | chr3_1:74455394-74455413 | None:intergenic | 40.0% | |
| ! | ATTGGAGCTGATTTACCTTG+GGG | + | chr3_1:74455414-74455433 | None:intergenic | 40.0% |
| ! | CATTGGAGCTGATTTACCTT+GGG | + | chr3_1:74455415-74455434 | None:intergenic | 40.0% |
| AGATGAATGTTGAGGAGATC+TGG | + | chr3_1:74455478-74455497 | None:intergenic | 40.0% | |
| GATAACAAAACGCACCATTC+AGG | - | chr3_1:74455531-74455550 | Msa0374920:exon | 40.0% | |
| TAACAAAACGCACCATTCAG+GGG | - | chr3_1:74455533-74455552 | Msa0374920:exon | 40.0% | |
| CGATGATCCGATATTCAGAT+CGG | - | chr3_1:74455617-74455636 | Msa0374920:intron | 40.0% | |
| !! | GATTTTGACGACTTCATGTC+TGG | - | chr3_1:74455789-74455808 | Msa0374920:intron | 40.0% |
| GAAGCAGCGTTTCCAATAAT+GGG | - | chr3_1:74455820-74455839 | Msa0374920:CDS | 40.0% | |
| CAAATGCTTACTAGGAGCAA+TGG | + | chr3_1:74456040-74456059 | None:intergenic | 40.0% | |
| CATTGCTCCTAGTAAGCATT+TGG | - | chr3_1:74456038-74456057 | Msa0374920:intron | 40.0% | |
| TTCTACACATACTCAGAACG+AGG | + | chr3_1:74456511-74456530 | None:intergenic | 40.0% | |
| !! | ACTCTTTTTGGCATGTGCAT+TGG | - | chr3_1:74456548-74456567 | Msa0374920:intron | 40.0% |
| TATTGATCGTCGTCATCCTT+TGG | - | chr3_1:74456749-74456768 | Msa0374920:CDS | 40.0% | |
| ATACAGTGAGACAACACCAA+AGG | + | chr3_1:74456768-74456787 | None:intergenic | 40.0% | |
| AAATGGATCATCATGTGGTG+TGG | + | chr3_1:74456858-74456877 | None:intergenic | 40.0% | |
| AGCATCTTCAGAATCATTCC+TGG | - | chr3_1:74456904-74456923 | Msa0374920:intron | 40.0% | |
| !! | TGATTTGCTCTAATGAGTCC+AGG | + | chr3_1:74456925-74456944 | None:intergenic | 40.0% |
| !! | TTTGAAGCATTCACTGGCTT+GGG | + | chr3_1:74457010-74457029 | None:intergenic | 40.0% |
| ! | CTTGAGTTTGAAGCATTCAC+TGG | + | chr3_1:74457016-74457035 | None:intergenic | 40.0% |
| TACTAGGATTACTCTGCACT+CGG | + | chr3_1:74457184-74457203 | None:intergenic | 40.0% | |
| GCAGAGTAATCCTAGTAGAA+AGG | - | chr3_1:74457187-74457206 | Msa0374920:intron | 40.0% | |
| AGAAAGGCAAATACCAACAC+TGG | - | chr3_1:74457203-74457222 | Msa0374920:intron | 40.0% | |
| TTGCTTAATCTCACCAGTGT+TGG | + | chr3_1:74457219-74457238 | None:intergenic | 40.0% | |
| ! | AATTGATTCACTCTTGCAGC+TGG | + | chr3_1:74457278-74457297 | None:intergenic | 40.0% |
| AACGTGTGCCTTAAGAACAT+TGG | - | chr3_1:74457411-74457430 | Msa0374920:intron | 40.0% | |
| AATGCTAACAAGTGCCCTTA+TGG | + | chr3_1:74457553-74457572 | None:intergenic | 40.0% | |
| GTTTACTTGGCGATCAAACA+TGG | + | chr3_1:74457657-74457676 | None:intergenic | 40.0% | |
| AAACATGAAGGGTCACAAAG+AGG | - | chr3_1:74457686-74457705 | Msa0374920:intron | 40.0% | |
| GAATGAAGGTTTCTTCGGAA+TGG | + | chr3_1:74457729-74457748 | None:intergenic | 40.0% | |
| GACGTGAATGAAGGTTTCTT+CGG | + | chr3_1:74457734-74457753 | None:intergenic | 40.0% | |
| !!! | GACGACTTGTCGTTGATTTT+TGG | - | chr3_1:74457761-74457780 | Msa0374920:intron | 40.0% |
| !!! | GACTTGTCGTTGATTTTTGG+CGG | - | chr3_1:74457764-74457783 | Msa0374920:intron | 40.0% |
| TTCCTCGAATTCAGATGACT+GGG | + | chr3_1:74457878-74457897 | None:intergenic | 40.0% | |
| GTCACGATTTCAGTTGAAAG+CGG | - | chr3_1:74458279-74458298 | Msa0374920:CDS | 40.0% | |
| TATCTGAACATCCACTGTGT+CGG | + | chr3_1:74458494-74458513 | None:intergenic | 40.0% | |
| CAGTGGATGTTCAGATAAAG+AGG | - | chr3_1:74458497-74458516 | Msa0374920:intron | 40.0% | |
| TGGATGTTCAGATAAAGAGG+TGG | - | chr3_1:74458500-74458519 | Msa0374920:intron | 40.0% | |
| GGATGTTCAGATAAAGAGGT+GGG | - | chr3_1:74458501-74458520 | Msa0374920:intron | 40.0% | |
| CTAGGTTTCAAATGCCTATC+TGG | + | chr3_1:74458746-74458765 | None:intergenic | 40.0% | |
| ! | CAGATAGGCATTTGAAACCT+AGG | - | chr3_1:74458744-74458763 | Msa0374920:intron | 40.0% |
| ! | AGGCATTTGAAACCTAGGTT+TGG | - | chr3_1:74458749-74458768 | Msa0374920:intron | 40.0% |
| ! | ACTTTTAATGCTTGGGCACA+AGG | - | chr3_1:74458782-74458801 | Msa0374920:intron | 40.0% |
| ! | CATTTCTTTTGTTAAGGGGG+GGG | - | chr3_1:74459047-74459066 | Msa0374920:intron | 40.0% |
| ! | AAGATGGTGTGCCTTTTTAC+TGG | - | chr3_1:74459204-74459223 | Msa0374920:intron | 40.0% |
| AGGTTCTTTCGCCAGATTAT+GGG | - | chr3_1:74459308-74459327 | Msa0374920:intron | 40.0% | |
| GGATATGATCACTTCAGCTT+CGG | - | chr3_1:74459351-74459370 | Msa0374920:intron | 40.0% | |
| ACAGAAATATACCGCAGAGA+AGG | - | chr3_1:74459447-74459466 | Msa0374920:intron | 40.0% | |
| GATGTCAAAAACCTTCTCTG+CGG | + | chr3_1:74459461-74459480 | None:intergenic | 40.0% | |
| GAACGGATAAAAAAAGGGGA+TGG | + | chr3_1:74459515-74459534 | None:intergenic | 40.0% | |
| TGATCTTGAATCAGGAAGCT+TGG | - | chr3_1:74459696-74459715 | Msa0374920:CDS | 40.0% | |
| ! | TTGAGGTTTTCACGAGTCAA+TGG | - | chr3_1:74459758-74459777 | Msa0374920:CDS | 40.0% |
| ATCAACGACTTGCATGGTTA+CGG | - | chr3_1:74459781-74459800 | Msa0374920:CDS | 40.0% | |
| !! | AGGCACTGACTAAACTGTTA+AGG | + | chr3_1:74460003-74460022 | None:intergenic | 40.0% |
| CAATACACCAAACTCGTCCA+TGG | + | chr3_1:74455370-74455389 | None:intergenic | 45.0% | |
| ! | GGTGTATTGACCGAACGATA+TGG | - | chr3_1:74455381-74455400 | Msa0374920:three_prime_UTR | 45.0% |
| ! | CGATATGGATTGAAACCCCA+AGG | - | chr3_1:74455396-74455415 | Msa0374920:three_prime_UTR | 45.0% |
| ! | CCATTGGAGCTGATTTACCT+TGG | + | chr3_1:74455416-74455435 | None:intergenic | 45.0% |
| CCAAGGTAAATCAGCTCCAA+TGG | - | chr3_1:74455413-74455432 | Msa0374920:three_prime_UTR | 45.0% | |
| GATCGCTTTATGGAAGCCAT+TGG | + | chr3_1:74455432-74455451 | None:intergenic | 45.0% | |
| ATGTTGAGGAGATCTGGATC+CGG | + | chr3_1:74455472-74455491 | None:intergenic | 45.0% | |
| !! | ATGGTGCGTTTTGTTATCGG+TGG | + | chr3_1:74455529-74455548 | None:intergenic | 45.0% |
| AACAAAACGCACCATTCAGG+GGG | - | chr3_1:74455534-74455553 | Msa0374920:exon | 45.0% | |
| GGAAACACCAAATCCAAGGT+CGG | - | chr3_1:74455576-74455595 | Msa0374920:intron | 45.0% | |
| GGAAGCAGCGTTTCCAATAA+TGG | - | chr3_1:74455819-74455838 | Msa0374920:CDS | 45.0% | |
| ! | GACACAGGTTGGAAACATGA+AGG | + | chr3_1:74456489-74456508 | None:intergenic | 45.0% |
| ! | GTTTGAAGCATTCACTGGCT+TGG | + | chr3_1:74457011-74457030 | None:intergenic | 45.0% |
| GAGCTTGAGAACTTTGCCAA+GGG | - | chr3_1:74457158-74457177 | Msa0374920:intron | 45.0% | |
| GCTAAGCCAGTCAAAGATAG+AGG | - | chr3_1:74457248-74457267 | Msa0374920:intron | 45.0% | |
| ACAGGTGTAGTCCTTGACTT+CGG | + | chr3_1:74457359-74457378 | None:intergenic | 45.0% | |
| AAGGTTTCTTCGGAATGGCT+GGG | + | chr3_1:74457724-74457743 | None:intergenic | 45.0% | |
| TTCCCAGTCATCTGAATTCG+AGG | - | chr3_1:74457873-74457892 | Msa0374920:intron | 45.0% | |
| CTTCCTCGAATTCAGATGAC+TGG | + | chr3_1:74457879-74457898 | None:intergenic | 45.0% | |
| GTCATCTGAATTCGAGGAAG+TGG | - | chr3_1:74457879-74457898 | Msa0374920:intron | 45.0% | |
| TCTGAATTCGAGGAAGTGGA+AGG | - | chr3_1:74457883-74457902 | Msa0374920:intron | 45.0% | |
| TCAGAGAACACAAGAGAGAG+CGG | - | chr3_1:74457945-74457964 | Msa0374920:intron | 45.0% | |
| ACGATTTCAGTTGAAAGCGG+TGG | - | chr3_1:74458282-74458301 | Msa0374920:CDS | 45.0% | |
| CTTGCTCCAGCTTAGATTGA+AGG | + | chr3_1:74458327-74458346 | None:intergenic | 45.0% | |
| GAACTGGGGAGAATTATAGC+AGG | + | chr3_1:74458402-74458421 | None:intergenic | 45.0% | |
| CAGGGAAAGAGGGAAATATG+CGG | - | chr3_1:74458527-74458546 | Msa0374920:intron | 45.0% | |
| AGGGAAAGAGGGAAATATGC+GGG | - | chr3_1:74458528-74458547 | Msa0374920:intron | 45.0% | |
| TGGCTATCTATGTGCCAGAT+AGG | - | chr3_1:74458729-74458748 | Msa0374920:intron | 45.0% | |
| GTGAGAGCTATTCCAAACCT+AGG | + | chr3_1:74458764-74458783 | None:intergenic | 45.0% | |
| CAGGTTCTTTCGCCAGATTA+TGG | - | chr3_1:74459307-74459326 | Msa0374920:intron | 45.0% | |
| TTCTTTCGCCAGATTATGGG+TGG | - | chr3_1:74459311-74459330 | Msa0374920:intron | 45.0% | |
| ATCATATCCGTCAGAGACAC+TGG | + | chr3_1:74459340-74459359 | None:intergenic | 45.0% | |
| AGCTTGGACCAAGTTCAATG+CGG | - | chr3_1:74459712-74459731 | Msa0374920:CDS | 45.0% | |
| AAGCTCTTCCGCATTGAACT+TGG | + | chr3_1:74459723-74459742 | None:intergenic | 45.0% | |
| AGTTCAATGCGGAAGAGCTT+CGG | - | chr3_1:74459723-74459742 | Msa0374920:CDS | 45.0% | |
| TTCGGTAGATCCATCTCTTG+AGG | - | chr3_1:74459741-74459760 | Msa0374920:CDS | 45.0% | |
| CTCGTGAAAACCTCAAGAGA+TGG | + | chr3_1:74459754-74459773 | None:intergenic | 45.0% | |
| CAATGGATCAACGACTTGCA+TGG | - | chr3_1:74459775-74459794 | Msa0374920:CDS | 45.0% | |
| GACTTGCATGGTTACGGTTT+GGG | - | chr3_1:74459787-74459806 | Msa0374920:CDS | 45.0% | |
| ACTTGCATGGTTACGGTTTG+GGG | - | chr3_1:74459788-74459807 | Msa0374920:CDS | 45.0% | |
| !! | TATCGTTTTGGTGCAGTCGA+AGG | - | chr3_1:74459841-74459860 | Msa0374920:CDS | 45.0% |
| GTCAGTGCCTAAAATCCAGT+CGG | - | chr3_1:74460013-74460032 | Msa0374920:five_prime_UTR | 45.0% | |
| !! | TAGAAATTATTAATATAATA+AGG | - | chr3_1:74457381-74457400 | Msa0374920:CDS | 5.0% |
| !!! | TATATTTAGATTTTTTTTTA+CGG | - | chr3_1:74460065-74460084 | Msa0374920:five_prime_UTR | 5.0% |
| ! | GTGGTTGGTCACTACCAGAA+AGG | - | chr3_1:74455097-74455116 | Msa0374920:three_prime_UTR | 50.0% |
| ! | GGTCACTACCAGAAAGGCAT+CGG | - | chr3_1:74455103-74455122 | Msa0374920:three_prime_UTR | 50.0% |
| ! | CTTTCTTCACTTCGCTGGCT+GGG | + | chr3_1:74455132-74455151 | None:intergenic | 50.0% |
| TCTTTCTTCACTTCGCTGGC+TGG | + | chr3_1:74455133-74455152 | None:intergenic | 50.0% | |
| !! | CTCGTCCATGGTGGATAGAA+CGG | + | chr3_1:74455358-74455377 | None:intergenic | 50.0% |
| CTATCCACCATGGACGAGTT+TGG | - | chr3_1:74455360-74455379 | Msa0374920:three_prime_UTR | 50.0% | |
| TACACCAAACTCGTCCATGG+TGG | + | chr3_1:74455367-74455386 | None:intergenic | 50.0% | |
| TGTGGGTGTGGATCGCTTTA+TGG | + | chr3_1:74455442-74455461 | None:intergenic | 50.0% | |
| CGGTGGAAACACCAAATCCA+AGG | - | chr3_1:74455572-74455591 | Msa0374920:intron | 50.0% | |
| ACCAAATCCAAGGTCGGCAA+CGG | - | chr3_1:74455582-74455601 | Msa0374920:intron | 50.0% | |
| ATCTTCTTTGTCGTCGTCGC+AGG | - | chr3_1:74455647-74455666 | Msa0374920:intron | 50.0% | |
| GACGACTTCATGTCTGGGTT+TGG | - | chr3_1:74455795-74455814 | Msa0374920:intron | 50.0% | |
| GACTTCATGTCTGGGTTTGG+TGG | - | chr3_1:74455798-74455817 | Msa0374920:intron | 50.0% | |
| CATACTCAGAACGAGGACAC+AGG | + | chr3_1:74456504-74456523 | None:intergenic | 50.0% | |
| TCATCATGTGGTGTGGCAGT+TGG | + | chr3_1:74456851-74456870 | None:intergenic | 50.0% | |
| CAAGCACCTCCCCATTATTG+AGG | - | chr3_1:74456978-74456997 | Msa0374920:CDS | 50.0% | |
| TGGGAGGAGGCCTCAATAAT+GGG | + | chr3_1:74456991-74457010 | None:intergenic | 50.0% | |
| TTGGGAGGAGGCCTCAATAA+TGG | + | chr3_1:74456992-74457011 | None:intergenic | 50.0% | |
| CGAGCTTGAGAACTTTGCCA+AGG | - | chr3_1:74457157-74457176 | Msa0374920:intron | 50.0% | |
| GGAGCTCCTCTATCTTTGAC+TGG | + | chr3_1:74457257-74457276 | None:intergenic | 50.0% | |
| TCGAGAGCCCATGCTGAAAA+AGG | + | chr3_1:74457324-74457343 | None:intergenic | 50.0% | |
| CTAGCAGTGTACCGAAGTCA+AGG | - | chr3_1:74457345-74457364 | Msa0374920:CDS | 50.0% | |
| GAAGTCAAGGACTACACCTG+TGG | - | chr3_1:74457358-74457377 | Msa0374920:CDS | 50.0% | |
| AGGTTTCTTCGGAATGGCTG+GGG | + | chr3_1:74457723-74457742 | None:intergenic | 50.0% | |
| GAAGGTTTCTTCGGAATGGC+TGG | + | chr3_1:74457725-74457744 | None:intergenic | 50.0% | |
| !! | AGATAAAGAGGTGGGCTGCA+GGG | - | chr3_1:74458509-74458528 | Msa0374920:intron | 50.0% |
| ! | ATGGTTGGAATTGACGGGCA+TGG | + | chr3_1:74459026-74459045 | None:intergenic | 50.0% |
| ACTGGTTGCCACCCATAATC+TGG | + | chr3_1:74459322-74459341 | None:intergenic | 50.0% | |
| CGACTTGCATGGTTACGGTT+TGG | - | chr3_1:74459786-74459805 | Msa0374920:CDS | 50.0% | |
| ! | GAGCAAGCCGACTGGATTTT+AGG | + | chr3_1:74460023-74460042 | None:intergenic | 50.0% |
| CACAATTTGAGCAAGCCGAC+TGG | + | chr3_1:74460031-74460050 | None:intergenic | 50.0% | |
| TTGAGGAGATCTGGATCCGG+CGG | + | chr3_1:74455469-74455488 | None:intergenic | 55.0% | |
| TCTCGTCAAAGCCCCCTGAA+TGG | + | chr3_1:74455548-74455567 | None:intergenic | 55.0% | |
| ! | GGGGGCTTTGACGAGATCTT+CGG | - | chr3_1:74455552-74455571 | Msa0374920:CDS | 55.0% |
| ! | GGCTTTGACGAGATCTTCGG+TGG | - | chr3_1:74455555-74455574 | Msa0374920:CDS | 55.0% |
| TCCGTTGCCGACCTTGGATT+TGG | + | chr3_1:74455586-74455605 | None:intergenic | 55.0% | |
| CTCAGAACGAGGACACAGGT+TGG | + | chr3_1:74456500-74456519 | None:intergenic | 55.0% | |
| ! | AGGAGGCCTCAATAATGGGG+AGG | + | chr3_1:74456987-74457006 | None:intergenic | 55.0% |
| GGGAGGAGGCCTCAATAATG+GGG | + | chr3_1:74456990-74457009 | None:intergenic | 55.0% | |
| !! | GAAGCATTCACTGGCTTGGG+AGG | + | chr3_1:74457007-74457026 | None:intergenic | 55.0% |
| ATTACTCTGCACTCGGCCCT+TGG | + | chr3_1:74457177-74457196 | None:intergenic | 55.0% | |
| GGGTCACAAAGAGGACCATC+AGG | - | chr3_1:74457695-74457714 | Msa0374920:intron | 55.0% | |
| CGGTGGCTGATATGAACCAG+CGG | - | chr3_1:74458299-74458318 | Msa0374920:CDS | 55.0% | |
| GGTGGCTGATATGAACCAGC+GGG | - | chr3_1:74458300-74458319 | Msa0374920:CDS | 55.0% | |
| GCTTAGATTGAAGGTCCCGC+TGG | + | chr3_1:74458318-74458337 | None:intergenic | 55.0% | |
| GCGGGACCTTCAATCTAAGC+TGG | - | chr3_1:74458318-74458337 | Msa0374920:CDS | 55.0% | |
| !! | CAGATAAAGAGGTGGGCTGC+AGG | - | chr3_1:74458508-74458527 | Msa0374920:intron | 55.0% |
| GTGGCAACCAGTGTCTCTGA+CGG | - | chr3_1:74459330-74459349 | Msa0374920:intron | 55.0% | |
| TAACCGCGTGGGATTGTGCG+TGG | - | chr3_1:74455078-74455097 | Msa0374920:three_prime_UTR | 60.0% | |
| CAACCACGCACAATCCCACG+CGG | + | chr3_1:74455084-74455103 | None:intergenic | 60.0% | |
| TGAGGAGATCTGGATCCGGC+GGG | + | chr3_1:74455468-74455487 | None:intergenic | 60.0% | |
| CGAAACTCCGTTGCCGACCT+TGG | + | chr3_1:74455592-74455611 | None:intergenic | 60.0% | |
| ! | GGTGTGGCAGTTGGTTTCCG+AGG | + | chr3_1:74456842-74456861 | None:intergenic | 60.0% |
| !! | GCATTCACTGGCTTGGGAGG+AGG | + | chr3_1:74457004-74457023 | None:intergenic | 60.0% |
| GGAATGGCTGGGGATCCTGA+TGG | + | chr3_1:74457713-74457732 | None:intergenic | 60.0% | |
| !! | AGGTGGGCTGCAGGGAAAGA+GGG | - | chr3_1:74458517-74458536 | Msa0374920:intron | 60.0% |
| CGCGTGGGATTGTGCGTGGT+TGG | - | chr3_1:74455082-74455101 | Msa0374920:three_prime_UTR | 65.0% | |
| CTGGGCTGCCGATGCCTTTC+TGG | + | chr3_1:74455114-74455133 | None:intergenic | 65.0% | |
| GCAGCGGATAGCCGACACAG+TGG | - | chr3_1:74458480-74458499 | Msa0374920:intron | 65.0% | |
| !! | GAGGTGGGCTGCAGGGAAAG+AGG | - | chr3_1:74458516-74458535 | Msa0374920:intron | 65.0% |
| TCCACACCCACACCTCCCGC+CGG | - | chr3_1:74455450-74455469 | Msa0374920:three_prime_UTR | 70.0% | |
| ! | CTGGATCCGGCGGGAGGTGT+GGG | + | chr3_1:74455459-74455478 | None:intergenic | 70.0% |
| TCTGGATCCGGCGGGAGGTG+TGG | + | chr3_1:74455460-74455479 | None:intergenic | 70.0% | |
| GGAGATCTGGATCCGGCGGG+AGG | + | chr3_1:74455465-74455484 | None:intergenic | 70.0% | |
| ! | TCCGGCGGGAGGTGTGGGTG+TGG | + | chr3_1:74455454-74455473 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 74455067 | 74460225 | 74455067 | ID=Msa0374920;Name=Msa0374920 |
| chr3_1 | mRNA | 74455067 | 74460225 | 74455067 | ID=Msa0374920-mRNA-1;Parent=Msa0374920;Name=Msa0374920-mRNA-1;_AED=0.12;_eAED=0.12;_QI=302|0.87|0.88|1|1|1|9|477|485 |
| chr3_1 | exon | 74455067 | 74455582 | 74455067 | ID=Msa0374920-mRNA-1:exon:17249;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74455806 | 74455982 | 74455806 | ID=Msa0374920-mRNA-1:exon:17248;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74456719 | 74456808 | 74456719 | ID=Msa0374920-mRNA-1:exon:17247;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74456935 | 74457000 | 74456935 | ID=Msa0374920-mRNA-1:exon:17246;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74457326 | 74457420 | 74457326 | ID=Msa0374920-mRNA-1:exon:17245;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74457507 | 74457642 | 74457507 | ID=Msa0374920-mRNA-1:exon:17244;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74458006 | 74458166 | 74458006 | ID=Msa0374920-mRNA-1:exon:17243;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74458258 | 74458478 | 74458258 | ID=Msa0374920-mRNA-1:exon:17242;Parent=Msa0374920-mRNA-1 |
| chr3_1 | exon | 74459451 | 74460225 | 74459451 | ID=Msa0374920-mRNA-1:exon:17241;Parent=Msa0374920-mRNA-1 |
| chr3_1 | five_prime_UTR | 74459924 | 74460225 | 74459924 | ID=Msa0374920-mRNA-1:five_prime_utr;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74459451 | 74459923 | 74459451 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74458258 | 74458478 | 74458258 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74458006 | 74458166 | 74458006 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74457507 | 74457642 | 74457507 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74457326 | 74457420 | 74457326 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74456935 | 74457000 | 74456935 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74456719 | 74456808 | 74456719 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74455806 | 74455982 | 74455806 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | CDS | 74455544 | 74455582 | 74455544 | ID=Msa0374920-mRNA-1:cds;Parent=Msa0374920-mRNA-1 |
| chr3_1 | three_prime_UTR | 74455067 | 74455543 | 74455067 | ID=Msa0374920-mRNA-1:three_prime_utr;Parent=Msa0374920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
