AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0376370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376370 MtrunA17_Chr3g0126741 92.623 366 26 1 1 366 1 365 0.0 699
Msa0376370 MtrunA17_Chr3g0126761 83.854 192 31 0 174 365 44 235 5.55e-109 318
Msa0376370 MtrunA17_Chr5g0426891 47.214 341 175 4 23 361 4 341 1.42e-108 321
Msa0376370 MtrunA17_Chr4g0050031 43.562 365 202 2 1 361 1 365 1.32e-107 320
Msa0376370 MtrunA17_Chr8g0345831 40.453 309 171 6 59 361 41 342 1.41e-73 232
Msa0376370 MtrunA17_Chr1g0179801 37.304 319 175 8 30 332 33 342 3.09e-67 216
Msa0376370 MtrunA17_Chr7g0265221 37.282 287 162 4 60 332 67 349 1.45e-65 212
Msa0376370 MtrunA17_Chr3g0128001 37.582 306 176 7 59 358 37 333 1.96e-64 208
Msa0376370 MtrunA17_Chr7g0242551 35.135 333 202 7 23 344 15 344 1.99e-63 206
Msa0376370 MtrunA17_Chr5g0423251 36.418 335 194 8 35 361 24 347 1.97e-62 203
Msa0376370 MtrunA17_Chr5g0424201 34.769 325 199 6 25 343 10 327 6.19e-62 201
Msa0376370 MtrunA17_Chr7g0250511 36.102 313 186 8 56 361 45 350 8.95e-62 201
Msa0376370 MtrunA17_Chr8g0375671 37.152 323 191 6 46 361 39 356 2.70e-61 201
Msa0376370 MtrunA17_Chr5g0420941 33.898 354 215 8 16 361 3 345 2.83e-61 200
Msa0376370 MtrunA17_Chr5g0423191 35.224 335 198 8 35 361 24 347 2.04e-60 198
Msa0376370 MtrunA17_Chr5g0398291 35.144 313 193 4 30 332 14 326 2.13e-60 198
Msa0376370 MtrunA17_Chr8g0375571 38.356 292 167 6 60 343 45 331 2.47e-59 195
Msa0376370 MtrunA17_Chr5g0421041 34.375 352 205 10 20 361 10 345 4.57e-59 194
Msa0376370 MtrunA17_Chr8g0375601 37.107 318 178 8 60 365 48 355 9.11e-59 194
Msa0376370 MtrunA17_Chr5g0421091 35.735 347 204 10 23 361 11 346 1.23e-58 193
Msa0376370 MtrunA17_Chr5g0412681 36.486 296 162 7 56 342 29 307 1.28e-58 193
Msa0376370 MtrunA17_Chr5g0412651 35.526 304 156 6 59 342 37 320 1.80e-58 193
Msa0376370 MtrunA17_Chr5g0423201 36.119 335 196 8 35 361 24 348 1.19e-57 191
Msa0376370 MtrunA17_Chr4g0066121 36.795 337 195 12 10 341 16 339 1.28e-57 191
Msa0376370 MtrunA17_Chr4g0006371 34.354 294 183 5 59 344 61 352 1.33e-57 191
Msa0376370 MtrunA17_Chr1g0184161 35.331 317 184 8 35 342 15 319 2.87e-57 189
Msa0376370 MtrunA17_Chr5g0420951 34.810 316 192 6 57 365 50 358 2.90e-57 190
Msa0376370 MtrunA17_Chr3g0113641 33.019 318 201 6 35 344 26 339 1.31e-56 188
Msa0376370 MtrunA17_Chr2g0314381 33.238 349 218 7 20 361 39 379 2.11e-56 189
Msa0376370 MtrunA17_Chr5g0421011 37.217 309 179 6 60 361 47 347 2.75e-56 187
Msa0376370 MtrunA17_Chr1g0187821 33.143 350 211 11 2 341 8 344 3.67e-56 187
Msa0376370 MtrunA17_Chr3g0114861 38.356 292 167 4 57 342 37 321 4.28e-56 186
Msa0376370 MtrunA17_Chr5g0420901 34.018 341 208 7 28 361 16 346 6.73e-56 186
Msa0376370 MtrunA17_Chr5g0423221 33.333 336 204 9 35 361 48 372 9.88e-56 187
Msa0376370 MtrunA17_Chr3g0109041 34.969 326 190 9 30 342 16 332 1.38e-55 186
Msa0376370 MtrunA17_Chr8g0336761 34.524 336 186 10 24 341 19 338 1.76e-55 186
Msa0376370 MtrunA17_Chr5g0437181 33.435 329 208 7 23 344 14 338 3.39e-55 185
Msa0376370 MtrunA17_Chr8g0336631 32.386 352 218 8 24 361 19 364 3.61e-55 185
Msa0376370 MtrunA17_Chr5g0412671 35.739 291 173 6 59 342 37 320 3.75e-55 184
Msa0376370 MtrunA17_Chr5g0420981 34.125 337 201 8 35 361 29 354 4.67e-55 184
Msa0376370 MtrunA17_Chr3g0093741 38.408 289 166 7 59 343 55 335 8.50e-55 184
Msa0376370 MtrunA17_Chr8g0354261 35.647 317 190 8 59 366 67 378 8.58e-55 184
Msa0376370 MtrunA17_Chr2g0311631 33.837 331 199 9 23 343 22 342 1.06e-54 184
Msa0376370 MtrunA17_Chr8g0365241 34.951 309 187 6 60 361 57 358 1.08e-54 183
Msa0376370 MtrunA17_Chr3g0093761 36.061 330 189 9 23 343 18 334 1.47e-54 183
Msa0376370 MtrunA17_Chr8g0348081 32.295 353 216 9 24 361 19 363 1.62e-54 183
Msa0376370 MtrunA17_Chr7g0239101 32.817 323 200 7 50 364 45 358 2.27e-54 182
Msa0376370 MtrunA17_Chr5g0424211 31.546 317 203 5 23 332 6 315 2.46e-54 182
Msa0376370 MtrunA17_Chr8g0336851 33.333 336 212 8 31 361 35 363 2.73e-54 182
Msa0376370 MtrunA17_Chr1g0184151 34.700 317 186 8 35 342 15 319 5.29e-54 181
Msa0376370 MtrunA17_Chr7g0239111 33.123 317 194 8 35 343 31 337 7.38e-54 181
Msa0376370 MtrunA17_Chr2g0314401 34.304 309 190 6 60 361 51 353 9.38e-54 181
Msa0376370 MtrunA17_Chr8g0336781 32.754 345 218 10 23 361 63 399 1.56e-53 181
Msa0376370 MtrunA17_Chr3g0125201 36.594 276 164 6 59 330 2 270 3.76e-53 178
Msa0376370 MtrunA17_Chr1g0187811 32.471 348 205 11 9 332 121 462 4.53e-53 182
Msa0376370 MtrunA17_Chr2g0311681 32.407 324 204 8 30 343 33 351 5.48e-53 179
Msa0376370 MtrunA17_Chr7g0225881 37.329 292 166 9 60 342 67 350 5.59e-53 179
Msa0376370 MtrunA17_Chr2g0311741 36.301 292 171 9 58 342 25 308 8.50e-53 177
Msa0376370 MtrunA17_Chr5g0421101 34.839 310 187 6 59 361 46 347 1.15e-52 178
Msa0376370 MtrunA17_Chr2g0314391 34.091 352 206 8 30 361 27 372 2.05e-52 178
Msa0376370 MtrunA17_Chr3g0093751 37.370 289 169 7 59 343 55 335 2.68e-52 177
Msa0376370 MtrunA17_Chr2g0311691 32.817 323 204 6 30 343 33 351 3.43e-52 177
Msa0376370 MtrunA17_Chr7g0239821 35.135 296 175 7 56 343 60 346 4.57e-52 177
Msa0376370 MtrunA17_Chr7g0265351 38.095 294 160 9 59 343 38 318 7.07e-52 175
Msa0376370 MtrunA17_Chr1g0162191 36.770 291 171 6 60 343 47 331 2.44e-51 174
Msa0376370 MtrunA17_Chr7g0239121 30.473 338 212 10 35 361 27 352 3.64e-51 174
Msa0376370 MtrunA17_Chr4g0045411 34.915 295 168 7 56 332 26 314 1.07e-50 172
Msa0376370 MtrunA17_Chr8g0371921 35.036 274 158 8 60 322 39 303 1.37e-50 173
Msa0376370 MtrunA17_Chr1g0187831 31.266 387 230 14 7 366 1 378 1.43e-50 173
Msa0376370 MtrunA17_Chr6g0472861 35.505 307 183 8 59 357 69 368 6.65e-50 171
Msa0376370 MtrunA17_Chr5g0423211 33.718 347 203 11 28 361 17 349 7.40e-50 171
Msa0376370 MtrunA17_Chr2g0311711 31.790 324 203 9 30 343 37 352 8.56e-50 171
Msa0376370 MtrunA17_Chr1g0184101 32.886 298 189 4 51 343 29 320 1.25e-49 170
Msa0376370 MtrunA17_Chr4g0045441 33.531 337 177 9 57 361 23 344 1.39e-49 170
Msa0376370 MtrunA17_Chr8g0371931 34.672 274 159 8 60 322 39 303 2.05e-49 170
Msa0376370 MtrunA17_Chr7g0235951 30.899 356 219 12 2 343 12 354 2.67e-49 170
Msa0376370 MtrunA17_Chr2g0311701 32.323 297 182 7 59 343 68 357 3.64e-49 169
Msa0376370 MtrunA17_Chr4g0045451 32.641 337 185 9 57 362 23 348 6.42e-49 168
Msa0376370 MtrunA17_Chr2g0311921 33.117 308 196 8 60 361 54 357 8.18e-49 168
Msa0376370 MtrunA17_Chr8g0375681 35.401 274 166 5 95 361 15 284 1.03e-48 166
Msa0376370 MtrunA17_Chr8g0354241 33.333 321 204 7 53 366 61 378 1.54e-48 168
Msa0376370 MtrunA17_Chr8g0336861 32.845 341 214 11 8 342 14 345 2.03e-48 167
Msa0376370 MtrunA17_Chr8g0364471 28.989 376 235 12 3 357 4 368 2.08e-48 167
Msa0376370 MtrunA17_Chr2g0296371 33.546 313 188 7 58 358 48 352 2.33e-48 167
Msa0376370 MtrunA17_Chr1g0184111 33.447 293 185 4 56 343 33 320 7.12e-48 165
Msa0376370 MtrunA17_Chr7g0220011 35.135 296 175 8 57 345 36 321 7.31e-48 165
Msa0376370 MtrunA17_Chr1g0184121 33.333 291 184 4 56 341 33 318 7.35e-48 165
Msa0376370 MtrunA17_Chr3g0087031 32.692 312 194 8 57 361 57 359 1.04e-47 165
Msa0376370 MtrunA17_Chr3g0102041 34.767 279 162 8 55 322 34 303 1.67e-47 164
Msa0376370 MtrunA17_Chr6g0455481 33.893 298 181 7 52 342 34 322 3.34e-47 163
Msa0376370 MtrunA17_Chr3g0114871 36.327 245 140 5 60 299 42 275 4.46e-47 161
Msa0376370 MtrunA17_Chr2g0311831 30.836 347 213 10 14 342 14 351 1.18e-46 162
Msa0376370 MtrunA17_Chr4g0045471 34.277 318 175 9 57 348 23 332 1.60e-46 162
Msa0376370 MtrunA17_Chr4g0055591 30.966 352 220 10 1 341 1 340 3.67e-46 161
Msa0376370 MtrunA17_Chr3g0145171 32.333 300 189 9 60 350 52 346 4.42e-46 160
Msa0376370 MtrunA17_Chr8g0336751 31.176 340 219 10 23 358 59 387 9.66e-46 161
Msa0376370 MtrunA17_Chr7g0266651 33.131 329 196 11 23 342 24 337 1.09e-45 160
Msa0376370 MtrunA17_Chr7g0232161 34.444 270 160 7 35 297 36 295 4.10e-45 157
Msa0376370 MtrunA17_Chr7g0220001 34.066 273 166 4 59 326 40 303 4.24e-45 157
Msa0376370 MtrunA17_Chr2g0311861 30.504 377 215 12 1 361 1 346 4.59e-45 158
Msa0376370 MtrunA17_Chr8g0335411 33.033 333 200 10 23 343 33 354 5.22e-45 158
Msa0376370 MtrunA17_Chr8g0375701 31.310 313 193 9 59 361 54 354 7.25e-45 157
Msa0376370 MtrunA17_Chr4g0045431 31.940 335 185 9 57 361 23 344 8.97e-45 157
Msa0376370 MtrunA17_Chr2g0311761 31.642 335 206 9 14 332 14 341 1.46e-44 157
Msa0376370 MtrunA17_Chr8g0370711 32.226 301 189 9 60 350 52 347 2.20e-44 156
Msa0376370 MtrunA17_Chr4g0066991 31.638 354 199 12 2 343 12 334 2.44e-44 156
Msa0376370 MtrunA17_Chr5g0405411 32.180 289 181 8 55 335 34 315 2.59e-44 156
Msa0376370 MtrunA17_Chr4g0064781 30.892 314 193 8 60 363 50 349 1.30e-43 154
Msa0376370 MtrunA17_Chr1g0162361 31.683 303 171 8 60 342 27 313 2.11e-43 153
Msa0376370 MtrunA17_Chr7g0247991 33.140 344 195 11 23 343 23 354 2.93e-43 154
Msa0376370 MtrunA17_Chr3g0121141 30.169 295 181 7 59 343 3 282 3.80e-43 152
Msa0376370 MtrunA17_Chr1g0167911 32.641 337 193 12 23 341 10 330 1.17e-42 152
Msa0376370 MtrunA17_Chr7g0236011 32.353 374 224 14 1 358 9 369 2.37e-42 151
Msa0376370 MtrunA17_Chr3g0145181 29.375 320 206 8 45 348 25 340 2.81e-42 150
Msa0376370 MtrunA17_Chr7g0239071 32.000 275 172 7 93 358 29 297 5.50e-42 149
Msa0376370 MtrunA17_Chr8g0370721 31.023 303 190 9 60 350 52 347 5.73e-42 150
Msa0376370 MtrunA17_Chr5g0439011 32.624 282 171 6 56 330 1 270 7.79e-42 149
Msa0376370 MtrunA17_Chr1g0184241 30.408 319 202 7 51 361 60 366 1.50e-41 149
Msa0376370 MtrunA17_Chr2g0332191 31.138 334 198 11 30 348 23 339 4.38e-41 148
Msa0376370 MtrunA17_Chr1g0161111 33.636 330 198 11 21 344 94 408 4.91e-41 149
Msa0376370 MtrunA17_Chr5g0420721 34.400 250 153 5 119 361 4 249 5.45e-41 145
Msa0376370 MtrunA17_Chr1g0158021 36.207 232 135 6 47 276 40 260 1.03e-40 144
Msa0376370 MtrunA17_Chr1g0167951 30.199 351 213 10 7 344 1 332 9.30e-40 144
Msa0376370 MtrunA17_Chr6g0474391 31.013 316 193 5 60 358 64 371 1.37e-39 144
Msa0376370 MtrunA17_Chr3g0145201 30.034 293 194 7 60 345 684 972 1.49e-39 149
Msa0376370 MtrunA17_Chr2g0289341 29.795 292 188 7 59 343 3 284 3.59e-39 141
Msa0376370 MtrunA17_Chr3g0126751 76.042 96 15 2 1 96 1 88 9.15e-39 134
Msa0376370 MtrunA17_Chr1g0204181 30.696 316 194 6 60 358 59 366 1.20e-38 141
Msa0376370 MtrunA17_Chr4g0011311 31.868 273 168 8 23 284 23 288 1.28e-38 140
Msa0376370 MtrunA17_Chr1g0161081 32.743 339 203 11 21 351 35 356 1.28e-38 141
Msa0376370 MtrunA17_Chr1g0162351 31.498 327 173 8 57 348 66 376 1.64e-38 142
Msa0376370 MtrunA17_Chr1g0167961 33.448 290 179 8 57 341 66 346 2.99e-38 140
Msa0376370 MtrunA17_Chr1g0162321 32.110 327 171 9 57 348 66 376 3.01e-38 141
Msa0376370 MtrunA17_Chr1g0158011 29.434 265 179 4 100 361 1 260 5.86e-38 137
Msa0376370 MtrunA17_Chr3g0130391 31.288 326 206 7 45 357 52 372 6.86e-38 140
Msa0376370 MtrunA17_Chr8g0351101 30.744 309 202 6 60 358 54 360 8.41e-38 139
Msa0376370 MtrunA17_Chr1g0148771 30.945 307 187 9 51 349 54 343 1.60e-37 138
Msa0376370 MtrunA17_Chr1g0191201 31.410 312 185 9 35 330 33 331 3.40e-37 137
Msa0376370 MtrunA17_Chr2g0313111 27.358 318 208 8 56 364 24 327 5.20e-37 136
Msa0376370 MtrunA17_Chr1g0161041 32.722 327 204 10 23 343 60 376 1.02e-36 137
Msa0376370 MtrunA17_Chr7g0239091 31.186 295 184 8 53 343 153 432 4.70e-36 136
Msa0376370 MtrunA17_Chr6g0488511 31.579 304 184 9 59 354 2 289 6.50e-36 132
Msa0376370 MtrunA17_Chr4g0053251 34.058 276 153 11 58 309 6 276 6.51e-36 133
Msa0376370 MtrunA17_Chr4g0045461 31.153 321 192 7 57 354 23 337 8.10e-36 134
Msa0376370 MtrunA17_Chr2g0285931 30.341 323 182 12 56 355 24 326 1.46e-35 132
Msa0376370 MtrunA17_Chr2g0319491 28.571 280 194 5 39 317 11 285 4.20e-35 131
Msa0376370 MtrunA17_Chr7g0235981 33.071 254 155 7 95 341 56 301 4.61e-35 131
Msa0376370 MtrunA17_Chr3g0125421 30.523 344 205 11 33 357 14 342 2.79e-34 129
Msa0376370 MtrunA17_Chr2g0314371 31.379 290 163 8 23 284 17 298 6.20e-34 128
Msa0376370 MtrunA17_Chr1g0167931 30.030 333 169 12 23 341 10 292 6.46e-33 125
Msa0376370 MtrunA17_Chr3g0092531 30.333 300 190 9 60 350 6 295 1.10e-32 124
Msa0376370 MtrunA17_Chr8g0362741 30.515 272 158 8 23 284 23 273 4.88e-32 122
Msa0376370 MtrunA17_Chr8g0358941 25.786 318 204 9 56 355 23 326 4.90e-32 123
Msa0376370 MtrunA17_Chr5g0420881 40.559 143 83 2 221 361 1 143 5.88e-32 117
Msa0376370 MtrunA17_Chr1g0170631 39.884 173 98 4 174 343 3 172 7.27e-32 119
Msa0376370 MtrunA17_Chr4g0068891 28.797 316 184 10 60 355 20 314 5.36e-31 120
Msa0376370 MtrunA17_Chr8g0384461 28.205 312 213 7 54 357 43 351 2.67e-30 119
Msa0376370 MtrunA17_Chr3g0105281 29.861 288 163 9 44 317 23 285 1.53e-29 116
Msa0376370 MtrunA17_Chr8g0384481 27.707 314 203 8 60 358 59 363 2.10e-29 116
Msa0376370 MtrunA17_Chr1g0194321 26.316 342 206 11 48 361 8 331 9.96e-29 114
Msa0376370 MtrunA17_Chr4g0064771 33.862 189 121 4 152 338 5 191 2.06e-28 110
Msa0376370 MtrunA17_Chr8g0348951 30.576 278 178 6 56 324 1 272 4.73e-28 112
Msa0376370 MtrunA17_Chr8g0389941 29.412 289 177 10 79 343 47 332 1.16e-27 111
Msa0376370 MtrunA17_Chr4g0052251 25.994 327 206 10 48 355 17 326 1.26e-27 110
Msa0376370 MtrunA17_Chr4g0075471 42.727 110 62 1 221 329 29 138 2.84e-27 105
Msa0376370 MtrunA17_Chr1g0158031 31.844 179 115 5 187 361 4 179 5.49e-27 105
Msa0376370 MtrunA17_Chr8g0336801 38.028 142 84 2 224 361 14 155 5.52e-27 104
Msa0376370 MtrunA17_Chr4g0055911 28.981 314 201 9 59 357 8 314 3.36e-26 107
Msa0376370 MtrunA17_Chr8g0336871 36.257 171 97 5 191 357 7 169 1.28e-25 101
Msa0376370 MtrunA17_Chr7g0247741 29.503 322 195 10 58 365 9 312 1.29e-25 105
Msa0376370 MtrunA17_Chr5g0407731 29.231 325 194 11 52 365 25 324 1.36e-25 105
Msa0376370 MtrunA17_Chr5g0394071 33.537 164 102 2 179 342 7 163 2.93e-25 100
Msa0376370 MtrunA17_Chr5g0407781 27.358 318 201 8 56 363 1 298 6.73e-24 100
Msa0376370 MtrunA17_Chr7g0233661 37.903 124 72 1 219 342 19 137 1.21e-22 93.2
Msa0376370 MtrunA17_Chr4g0055871 27.778 306 186 13 57 343 6 295 1.59e-22 96.7
Msa0376370 MtrunA17_Chr3g0138351 25.806 310 217 8 60 359 7 313 1.13e-21 94.4
Msa0376370 MtrunA17_Chr4g0037611 37.692 130 78 2 187 315 4 131 1.67e-21 90.9
Msa0376370 MtrunA17_Chr8g0364171 36.885 122 74 3 174 294 18 137 1.95e-21 89.4
Msa0376370 MtrunA17_Chr6g0486831 27.458 295 181 10 77 343 32 321 7.33e-21 92.4
Msa0376370 MtrunA17_Chr4g0009561 25.237 317 214 8 55 355 2 311 8.33e-21 91.7
Msa0376370 MtrunA17_Chr8g0336831 31.551 187 117 5 60 241 60 240 9.80e-21 90.5
Msa0376370 MtrunA17_Chr8g0375581 43.678 87 46 2 195 280 1 85 3.95e-20 84.0
Msa0376370 MtrunA17_Chr2g0293931 31.915 188 114 6 180 355 13 198 4.01e-20 87.4
Msa0376370 MtrunA17_Chr2g0319521 35.772 123 75 2 164 284 4 124 8.77e-20 84.7
Msa0376370 MtrunA17_Chr4g0004071 24.671 304 217 7 55 350 4 303 5.23e-18 83.6
Msa0376370 MtrunA17_Chr1g0167921 37.615 109 66 2 176 284 51 157 3.05e-17 78.6
Msa0376370 MtrunA17_Chr4g0009541 25.084 299 206 7 56 342 3 295 3.24e-17 81.6
Msa0376370 MtrunA17_Chr3g0092581 28.481 158 109 3 195 350 12 167 1.42e-16 77.0
Msa0376370 MtrunA17_Chr2g0311611 45.714 70 31 1 221 283 1 70 1.68e-16 73.6
Msa0376370 MtrunA17_Chr1g0170641 31.200 125 80 3 54 174 39 161 8.99e-16 74.3
Msa0376370 MtrunA17_Chr8g0375641 37.313 134 76 3 46 174 39 169 1.04e-15 74.7
Msa0376370 MtrunA17_Chr1g0161101 37.273 110 58 3 217 324 402 502 2.49e-15 77.0
Msa0376370 MtrunA17_Chr8g0375661 36.567 134 77 3 46 174 39 169 2.88e-15 73.2
Msa0376370 MtrunA17_Chr7g0235991 28.472 144 100 3 60 202 21 162 7.28e-15 72.4
Msa0376370 MtrunA17_Chr2g0311641 31.655 139 88 3 23 161 22 153 8.35e-15 71.6
Msa0376370 MtrunA17_Chr7g0219991 38.532 109 63 2 175 282 249 354 3.75e-14 72.8
Msa0376370 MtrunA17_Chr1g0148781 25.839 298 204 9 60 343 8 302 5.15e-14 72.0
Msa0376370 MtrunA17_Chr8g0336791 28.994 169 108 6 21 185 26 186 1.44e-12 65.9
Msa0376370 MtrunA17_Chr5g0420891 31.724 145 90 4 28 171 16 152 9.11e-12 63.2
Msa0376370 MtrunA17_Chr1g0184141 32.061 131 76 3 105 228 4 128 1.51e-11 61.2
Msa0376370 MtrunA17_Chr8g0375591 38.806 67 41 0 60 126 46 112 5.47e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0376370 AT4G10500.1 36.937 333 197 6 35 361 20 345 5.81e-68 218
Msa0376370 AT2G44800.1 37.061 313 185 7 58 364 50 356 3.81e-67 216
Msa0376370 AT4G10490.1 35.312 337 202 7 35 363 18 346 8.28e-67 215
Msa0376370 AT3G60290.1 37.097 310 181 8 59 361 51 353 6.06e-66 213
Msa0376370 AT5G24530.1 35.777 341 200 9 31 358 2 336 4.88e-64 207
Msa0376370 AT4G22880.1 37.072 321 190 5 23 332 7 326 7.16e-64 207
Msa0376370 AT4G22880.2 37.072 321 190 5 23 332 7 326 7.16e-64 207
Msa0376370 AT4G22880.3 37.072 321 190 5 23 332 7 326 7.16e-64 207
Msa0376370 AT2G36690.2 35.783 313 184 7 30 332 27 332 9.11e-64 207
Msa0376370 AT2G36690.1 35.783 313 184 7 30 332 27 332 9.11e-64 207
Msa0376370 AT5G07480.1 35.556 315 185 9 60 361 44 353 1.65e-60 199
Msa0376370 AT1G55290.1 36.446 332 197 8 15 342 20 341 7.58e-59 194
Msa0376370 AT2G38240.1 33.628 339 208 9 20 349 9 339 5.07e-58 192
Msa0376370 AT1G78550.1 33.621 348 214 9 22 361 17 355 7.56e-58 192
Msa0376370 AT1G17010.1 31.148 366 240 6 7 365 1 361 1.08e-57 192
Msa0376370 AT5G08640.2 35.862 290 174 5 59 342 42 325 3.68e-56 187
Msa0376370 AT5G08640.1 35.862 290 174 5 59 342 42 325 3.68e-56 187
Msa0376370 AT3G13610.1 33.232 328 198 8 23 342 27 341 9.73e-56 186
Msa0376370 AT1G17020.1 32.934 334 204 8 20 342 14 338 9.15e-55 184
Msa0376370 AT3G11180.1 34.030 335 204 9 20 344 53 380 1.33e-53 182
Msa0376370 AT3G11180.2 34.030 335 204 9 20 344 53 380 1.36e-53 182
Msa0376370 AT1G06620.1 37.631 287 167 6 59 341 61 339 8.35e-52 176
Msa0376370 AT4G25300.1 32.486 354 216 10 20 361 13 355 1.02e-51 176
Msa0376370 AT4G16330.2 34.076 314 186 7 57 362 64 364 1.69e-51 176
Msa0376370 AT5G59540.1 36.393 305 179 9 60 358 61 356 1.70e-51 176
Msa0376370 AT5G63590.1 34.812 293 178 5 57 342 11 297 2.58e-51 173
Msa0376370 AT5G63600.1 35.667 300 173 7 57 350 30 315 3.68e-51 174
Msa0376370 AT3G12900.1 34.615 286 175 7 63 343 59 337 6.40e-51 174
Msa0376370 AT5G20400.1 33.876 307 190 9 60 357 45 347 8.08e-51 173
Msa0376370 AT3G21420.1 35.238 315 191 7 53 358 48 358 1.22e-50 173
Msa0376370 AT5G05600.1 32.635 334 210 8 20 344 24 351 1.95e-50 173
Msa0376370 AT5G63600.2 35.548 301 173 8 57 350 30 316 1.39e-49 169
Msa0376370 AT5G54000.2 33.010 309 190 9 60 357 46 348 2.05e-49 170
Msa0376370 AT5G59530.1 35.350 314 186 11 35 341 35 338 7.53e-49 169
Msa0376370 AT3G51240.1 32.588 313 188 9 60 355 38 344 1.39e-48 168
Msa0376370 AT3G19010.1 32.476 311 181 9 60 349 28 330 1.96e-48 167
Msa0376370 AT3G19010.4 32.476 311 181 9 60 349 28 330 1.96e-48 167
Msa0376370 AT1G78550.2 34.173 278 170 6 92 361 5 277 3.85e-48 164
Msa0376370 AT1G03400.1 35.897 273 163 6 79 346 66 331 4.46e-48 166
Msa0376370 AT1G77330.1 34.333 300 178 8 59 347 2 293 4.74e-48 165
Msa0376370 AT4G25310.1 34.138 290 176 7 80 361 70 352 5.90e-48 166
Msa0376370 AT1G04380.1 33.962 318 194 8 45 358 30 335 8.97e-48 165
Msa0376370 AT3G55970.1 31.085 341 219 9 23 350 14 351 1.52e-47 165
Msa0376370 AT5G43440.1 35.593 295 168 10 56 341 58 339 3.15e-47 164
Msa0376370 AT1G03410.1 32.869 359 204 13 11 346 34 378 1.70e-46 163
Msa0376370 AT1G03410.2 32.571 350 208 12 10 346 7 341 3.09e-46 162
Msa0376370 AT3G19000.1 31.111 315 189 8 56 349 28 335 4.07e-46 161
Msa0376370 AT1G80330.1 32.597 362 211 13 14 361 7 349 6.79e-46 160
Msa0376370 AT1G49390.1 33.010 309 190 10 60 357 45 347 2.36e-44 156
Msa0376370 AT5G54000.1 32.963 270 169 7 97 357 2 268 2.42e-44 154
Msa0376370 AT1G04350.1 34.828 290 177 7 59 342 57 340 3.48e-44 156
Msa0376370 AT1G06650.2 31.686 344 205 12 21 342 14 349 3.60e-44 156
Msa0376370 AT1G06620.2 39.207 227 133 4 59 284 61 283 4.03e-44 154
Msa0376370 AT5G07480.2 35.950 242 139 7 133 361 6 244 7.73e-44 152
Msa0376370 AT2G30830.1 32.986 288 178 8 60 341 54 332 8.92e-44 155
Msa0376370 AT5G43450.1 32.907 313 187 9 35 341 41 336 1.11e-43 155
Msa0376370 AT5G20550.1 32.602 319 190 11 35 338 19 327 2.19e-43 154
Msa0376370 AT1G15550.1 32.667 300 170 9 59 343 56 338 2.74e-43 154
Msa0376370 AT1G06640.1 31.356 354 215 11 11 342 2 349 6.95e-43 153
Msa0376370 AT1G12010.1 30.303 297 185 8 55 343 2 284 1.17e-42 151
Msa0376370 AT5G43935.1 32.550 298 160 8 56 342 15 282 2.60e-42 149
Msa0376370 AT1G03400.2 32.558 301 163 7 79 346 66 359 2.63e-42 152
Msa0376370 AT4G16330.1 34.510 255 155 4 115 362 9 258 4.61e-42 148
Msa0376370 AT1G80340.1 31.481 324 193 9 36 343 21 331 9.96e-42 149
Msa0376370 AT1G06645.1 31.395 344 203 10 21 342 27 359 1.22e-41 150
Msa0376370 AT2G30840.1 31.503 346 210 11 21 349 9 344 2.36e-41 149
Msa0376370 AT3G19010.3 31.229 301 168 8 60 349 28 300 4.40e-41 147
Msa0376370 AT1G62380.1 30.272 294 189 8 55 343 2 284 5.00e-41 147
Msa0376370 AT3G61400.1 29.363 361 219 13 1 341 1 345 7.28e-41 147
Msa0376370 AT5G59540.2 38.158 228 134 6 60 284 61 284 1.09e-40 145
Msa0376370 AT4G25420.1 33.043 345 203 11 1 327 1 335 2.04e-40 147
Msa0376370 AT5G12270.1 30.303 330 211 8 23 343 21 340 9.02e-40 144
Msa0376370 AT5G43440.2 35.865 237 137 7 56 286 58 285 9.89e-40 142
Msa0376370 AT2G19590.1 33.013 312 180 9 52 354 3 294 1.19e-39 143
Msa0376370 AT5G63595.1 33.452 281 138 7 57 324 22 266 1.71e-39 142
Msa0376370 AT5G05600.2 32.601 273 170 7 20 284 24 290 8.51e-39 140
Msa0376370 AT3G51240.2 35.841 226 126 7 108 322 1 218 8.62e-39 140
Msa0376370 AT5G07200.1 31.677 322 188 8 60 359 58 369 9.03e-39 142
Msa0376370 AT2G30840.3 31.503 346 204 12 21 349 9 338 3.87e-38 140
Msa0376370 AT1G49390.2 31.852 270 172 8 97 357 2 268 4.21e-38 137
Msa0376370 AT3G19010.2 33.333 246 136 8 60 285 28 265 7.32e-38 138
Msa0376370 AT5G43450.2 33.077 260 144 8 35 284 41 280 1.06e-37 137
Msa0376370 AT1G04380.2 34.568 243 151 5 45 286 30 265 1.14e-37 137
Msa0376370 AT3G19000.2 31.907 257 148 7 56 292 28 277 1.15e-37 137
Msa0376370 AT1G05010.1 31.618 272 176 6 59 327 3 267 1.39e-37 138
Msa0376370 AT5G51810.1 31.024 332 184 11 50 358 56 365 1.52e-37 139
Msa0376370 AT1G06650.1 32.616 279 165 8 21 283 14 285 2.88e-37 137
Msa0376370 AT1G30040.1 30.351 313 185 10 59 355 30 325 9.34e-37 136
Msa0376370 AT1G60980.1 32.979 282 170 5 60 326 57 334 1.11e-36 137
Msa0376370 AT2G25450.1 31.959 291 178 10 60 341 55 334 1.76e-36 135
Msa0376370 AT1G06640.2 31.757 296 181 8 11 290 2 292 2.70e-36 134
Msa0376370 AT1G78440.1 30.032 313 187 11 60 355 18 315 4.84e-36 134
Msa0376370 AT2G30840.2 31.884 276 168 8 23 284 11 280 1.05e-35 132
Msa0376370 AT3G55970.2 30.037 273 178 7 23 285 14 283 1.08e-35 132
Msa0376370 AT4G21200.1 26.380 326 192 7 39 342 14 313 1.94e-35 132
Msa0376370 AT1G44090.1 31.148 305 178 7 60 346 63 353 4.24e-35 132
Msa0376370 AT1G06640.3 31.818 286 174 8 11 280 2 282 6.52e-35 130
Msa0376370 AT5G63580.1 34.322 236 138 5 56 284 15 240 3.03e-34 127
Msa0376370 AT4G21690.1 28.994 338 198 12 30 343 14 333 3.37e-34 129
Msa0376370 AT5G63580.2 34.188 234 137 5 56 282 15 238 5.52e-34 126
Msa0376370 AT1G50960.1 29.097 299 197 5 28 320 8 297 1.67e-33 127
Msa0376370 AT4G25310.2 29.412 289 163 7 80 361 70 324 8.71e-33 125
Msa0376370 AT3G61400.2 27.667 300 189 10 1 284 1 288 2.58e-32 123
Msa0376370 AT3G50210.4 33.808 281 149 12 59 308 7 281 3.03e-32 124
Msa0376370 AT3G50210.1 33.808 281 149 12 59 308 7 281 3.03e-32 124
Msa0376370 AT3G50210.3 33.808 281 149 12 59 308 7 281 3.03e-32 124
Msa0376370 AT4G25300.2 35.417 192 119 4 173 361 72 261 6.53e-32 121
Msa0376370 AT1G47990.1 28.746 327 184 11 60 361 15 317 2.33e-31 121
Msa0376370 AT4G23340.1 31.633 294 175 11 86 365 30 311 2.83e-31 121
Msa0376370 AT2G34555.1 28.939 311 189 11 60 355 27 320 3.25e-30 118
Msa0376370 AT3G49620.1 29.787 282 172 9 50 308 24 302 1.76e-29 117
Msa0376370 AT2G19590.2 31.365 271 160 8 93 354 26 279 5.02e-28 111
Msa0376370 AT3G49630.1 30.882 272 162 9 60 308 9 277 8.32e-28 112
Msa0376370 AT5G58660.1 28.417 278 151 6 59 304 33 294 3.19e-27 110
Msa0376370 AT4G25420.2 30.872 298 178 11 1 280 1 288 3.59e-26 106
Msa0376370 AT3G49630.3 31.048 248 152 7 77 308 29 273 3.72e-26 107
Msa0376370 AT3G47190.1 27.957 279 161 7 60 317 32 291 1.10e-25 105
Msa0376370 AT1G02400.1 27.848 316 193 11 59 355 23 322 8.66e-25 103
Msa0376370 AT5G51810.2 29.297 256 145 8 50 287 56 293 2.07e-24 102
Msa0376370 AT1G14130.1 27.414 321 193 11 60 364 9 305 5.51e-24 100
Msa0376370 AT1G14120.2 31.293 294 172 13 55 337 3 277 5.54e-24 100
Msa0376370 AT1G14120.1 31.293 294 172 13 55 337 3 277 5.54e-24 100
Msa0376370 AT1G14120.3 31.293 294 172 13 55 337 3 277 5.54e-24 100
Msa0376370 AT3G46490.1 26.791 321 208 10 53 349 5 322 6.86e-23 98.2
Msa0376370 AT3G46490.2 28.727 275 169 7 53 303 5 276 1.62e-22 97.1
Msa0376370 AT5G51310.1 27.358 318 188 11 56 347 1 301 1.08e-21 94.7
Msa0376370 AT1G30040.2 29.876 241 137 9 59 284 30 253 2.24e-21 92.8
Msa0376370 AT5G58660.2 27.237 257 139 6 59 283 33 273 2.76e-21 92.8
Msa0376370 AT4G23340.2 32.308 195 120 7 179 365 3 193 5.04e-20 87.8
Msa0376370 AT1G35190.1 27.157 313 192 10 57 343 9 311 2.89e-19 87.8
Msa0376370 AT3G50210.2 35.542 166 95 6 152 309 39 200 7.73e-19 85.5
Msa0376370 AT1G52820.1 27.365 296 200 8 56 343 8 296 1.65e-18 85.5
Msa0376370 AT1G35190.2 27.302 315 166 13 57 343 9 288 2.85e-18 84.7
Msa0376370 AT4G22870.1 44.444 81 44 1 253 332 2 82 1.10e-17 78.6
Msa0376370 AT3G49630.2 36.552 145 88 4 166 308 62 204 3.17e-17 80.9
Msa0376370 AT4G03070.1 26.752 314 202 11 56 352 10 312 9.63e-16 77.8
Msa0376370 AT4G22870.2 42.857 84 44 2 253 332 40 123 1.16e-15 73.9
Msa0376370 AT1G52800.1 25.287 261 178 7 57 308 7 259 7.83e-15 75.1
Msa0376370 AT4G16770.1 28.169 213 136 6 57 258 19 225 4.78e-14 72.0
Msa0376370 AT2G06960.1 37.931 87 48 2 191 277 1 81 8.00e-14 68.9
Msa0376370 AT4G03050.2 38.053 113 67 3 234 343 274 386 8.38e-14 72.8
Msa0376370 AT4G03050.1 38.053 113 67 3 234 343 274 386 8.38e-14 72.8
Msa0376370 AT4G16765.6 28.947 190 124 5 171 352 57 243 1.94e-13 69.7
Msa0376370 AT4G16765.1 28.947 190 124 5 171 352 57 243 1.94e-13 69.7
Msa0376370 AT4G16765.2 28.947 190 124 5 171 352 57 243 1.94e-13 69.7
Msa0376370 AT4G16765.3 30.573 157 101 3 171 320 57 212 2.88e-13 69.3
Msa0376370 AT1G02400.2 26.531 245 147 9 59 286 23 251 3.14e-13 69.7
Msa0376370 AT3G46480.1 27.189 217 142 6 109 317 34 242 1.12e-11 65.1
Msa0376370 AT1G80320.1 24.335 263 174 8 60 308 9 260 1.27e-11 65.5

Find 104 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACCTTCCTTATACAAAA+TGG 0.228236 3_1:+76460949 Msa0376370:CDS
AAGTTAAACATGAGGGTAAA+TGG 0.242743 3_1:+76460986 Msa0376370:CDS
TTCTGTGAGGGAGTGGTAAT+TGG 0.299824 3_1:-76458483 None:intergenic
ATATGGTTGATGTTAATTAA+TGG 0.329593 3_1:+76461586 Msa0376370:three_prime_UTR
TTCCTTATACAAAATGGAAT+TGG 0.330250 3_1:+76460955 Msa0376370:CDS
TTCTGAATGGGGTTTCTTCA+TGG 0.334563 3_1:+76458634 Msa0376370:CDS
CTCACAAACCACCAGGTTAC+AGG 0.348722 3_1:+76459666 Msa0376370:CDS
AGATGACTCAATTATAGAAT+TGG 0.362656 3_1:-76460824 None:intergenic
CGGAATTCCTGAGAGTCTTA+TGG 0.377411 3_1:+76459460 Msa0376370:CDS
GTTTGTGAGGGAAATTGAAT+TGG 0.381128 3_1:-76459652 None:intergenic
TTTCTTTCTGTAATAGTTCA+GGG 0.390100 3_1:-76461388 None:intergenic
TTTGTGAGGGAAATTGAATT+GGG 0.392086 3_1:-76459651 None:intergenic
TGCCAAGGCATGTTCTGAAT+GGG 0.395223 3_1:+76458622 Msa0376370:CDS
AATTCTATAATTGAGTCATC+TGG 0.405446 3_1:+76460826 Msa0376370:CDS
TGACTCTGGCTTACAAATCA+TGG 0.407059 3_1:+76460852 Msa0376370:CDS
GATTGCAATCATGTAGGATT+AGG 0.407606 3_1:-76458291 None:intergenic
TATTGAATATTGATGTAGTT+AGG 0.410927 3_1:-76458318 None:intergenic
GTGGAGGAAAAGAAGGAGTT+TGG 0.415340 3_1:+76459524 Msa0376370:CDS
ATTGTCAGATGAAAGGGCTT+TGG 0.417168 3_1:+76461469 Msa0376370:CDS
TTCTAGTATCCTTGTTGTTG+AGG 0.420071 3_1:-76461313 None:intergenic
TCACGAGTTTCATGATTTGC+CGG 0.420758 3_1:+76459502 Msa0376370:CDS
TTGCCTGCTCATTCTGATGT+TGG 0.430270 3_1:+76460922 Msa0376370:CDS
GTCACGATTGTCAGATGAAA+GGG 0.433173 3_1:+76461463 Msa0376370:CDS
AAAGGGCTTTGGACCAGGTT+CGG 0.439412 3_1:+76461480 Msa0376370:CDS
TTCATGCATCAAAGCCTTTG+CGG 0.439432 3_1:+76458433 Msa0376370:CDS
CTTATACAAAATGGAATTGG+AGG 0.454598 3_1:+76460958 Msa0376370:CDS
ACAACTAAGCAGTTGGGAAT+GGG 0.456540 3_1:-76461021 None:intergenic
TTCTGTAATAGTTCAGGGGC+AGG 0.461072 3_1:-76461383 None:intergenic
AGTTAAACATGAGGGTAAAT+GGG 0.461770 3_1:+76460987 Msa0376370:CDS
AACTCCTCCATAAGACTCTC+AGG 0.461775 3_1:-76459467 None:intergenic
TTGGTTAGGCTGTGAGTAAC+GGG 0.462719 3_1:+76461261 Msa0376370:intron
AAAGCCTTTGCGGAATCAAA+TGG 0.463467 3_1:+76458443 Msa0376370:CDS
TTGCCAAGGCATGTTCTGAA+TGG 0.474540 3_1:+76458621 Msa0376370:CDS
CCACAACCACACCTTGCTCT+AGG 0.476880 3_1:+76460898 Msa0376370:CDS
CAAGGAATATCCGAGAGCTT+AGG 0.479098 3_1:+76460793 Msa0376370:CDS
GACAACTAAGCAGTTGGGAA+TGG 0.485868 3_1:-76461022 None:intergenic
GTTTCATGATTTGCCGGTGG+AGG 0.490548 3_1:+76459508 Msa0376370:CDS
ATAAGTCTTGTAGTGGTGAA+TGG 0.497425 3_1:+76461335 Msa0376370:CDS
GTGAGCCTTTCTCACCCATC+AGG 0.497508 3_1:+76459555 Msa0376370:CDS
CCATGGATGTATCTTTGAGT+TGG 0.499592 3_1:-76458355 None:intergenic
AGGAGAGAGAAATCAATGAC+TGG 0.506214 3_1:-76458554 None:intergenic
AGATGAAAGGGCTTTGGACC+AGG 0.507031 3_1:+76461475 Msa0376370:CDS
CCTGCAGAAGATAGAGATGT+TGG 0.522228 3_1:+76461359 Msa0376370:CDS
GCAAGGTGTGGTTGTGGACA+TGG 0.524776 3_1:-76460892 None:intergenic
CCAACATCTCTATCTTCTGC+AGG 0.526331 3_1:-76461359 None:intergenic
CACAACCACACCTTGCTCTA+GGG 0.528331 3_1:+76460899 Msa0376370:CDS
ACCCCATTCAGAACATGCCT+TGG 0.533966 3_1:-76458624 None:intergenic
AATGTTGACAACTAAGCAGT+TGG 0.534203 3_1:-76461028 None:intergenic
CCTAGAGCAAGGTGTGGTTG+TGG 0.536111 3_1:-76460898 None:intergenic
AACTGCTTAGTTGTCAACAT+TGG 0.539808 3_1:+76461030 Msa0376370:CDS
AAGAAGGAGTTTGGTGACAA+TGG 0.540669 3_1:+76459533 Msa0376370:CDS
GTGGCAAGGAAATTGATTCA+AGG 0.543648 3_1:+76460775 Msa0376370:CDS
ACATCAATAATATTATCATC+AGG 0.544031 3_1:-76458506 None:intergenic
GAAGCTAGTGCCATGCCTGA+TGG 0.544410 3_1:-76459570 None:intergenic
AGAGAAATCAATGACTGGGA+TGG 0.545007 3_1:-76458549 None:intergenic
GGAAGTGATTGCAATCATGT+AGG 0.547114 3_1:-76458297 None:intergenic
TTCTTTCTGTAATAGTTCAG+GGG 0.553250 3_1:-76461387 None:intergenic
CATCAGGTTCTGTGAGGGAG+TGG 0.554209 3_1:-76458490 None:intergenic
CCATGCCTGATGGGTGAGAA+AGG 0.556931 3_1:-76459560 None:intergenic
AACTGTTCATGAACTTGCCA+AGG 0.559563 3_1:+76458607 Msa0376370:CDS
CTGTAACCTGGTGGTTTGTG+AGG 0.566033 3_1:-76459665 None:intergenic
ATGTTGACAACTAAGCAGTT+GGG 0.568577 3_1:-76461027 None:intergenic
GTGAGGGAGTGGTAATTGGA+AGG 0.569707 3_1:-76458479 None:intergenic
AAGCCAACATCAGAATGAGC+AGG 0.569982 3_1:-76460925 None:intergenic
ATTGGTTAGGCTGTGAGTAA+CGG 0.572307 3_1:+76461260 Msa0376370:intron
GCCAAGGCATGTTCTGAATG+GGG 0.575041 3_1:+76458623 Msa0376370:CDS
GTACACTCTCTGATGGAGGA+TGG 0.575682 3_1:-76459592 None:intergenic
GTAATTGGAAGGAATGAGAG+AGG 0.579683 3_1:-76458468 None:intergenic
GGATTCTAATCCTAAGCTCT+CGG 0.580227 3_1:-76460803 None:intergenic
TTTGCCGGTGGAGGAAAAGA+AGG 0.581034 3_1:+76459517 Msa0376370:CDS
AGTCACGATTGTCAGATGAA+AGG 0.583621 3_1:+76461462 Msa0376370:CDS
CGAGTTTCATGATTTGCCGG+TGG 0.584918 3_1:+76459505 Msa0376370:CDS
CCTTTCTCACCCATCAGGCA+TGG 0.586008 3_1:+76459560 Msa0376370:CDS
AAGCTAGTGCCATGCCTGAT+GGG 0.586542 3_1:-76459569 None:intergenic
TTGTGAGGGAAATTGAATTG+GGG 0.588809 3_1:-76459650 None:intergenic
ATGGTCTTGTCTAGTTCTAG+AGG 0.589661 3_1:+76461531 Msa0376370:three_prime_UTR
AATTTCCCTCACAAACCACC+AGG 0.608315 3_1:+76459659 Msa0376370:CDS
TACTAGAATAAGTCTTGTAG+TGG 0.611192 3_1:+76461328 Msa0376370:CDS
ATTATCATCAGGTTCTGTGA+GGG 0.613628 3_1:-76458495 None:intergenic
GGTTCCATTTGATTCCGCAA+AGG 0.614264 3_1:-76458447 None:intergenic
AATTGTAGTTGCTGAAGCCA+TGG 0.617132 3_1:-76458372 None:intergenic
CTTAATTACCTGTAACCTGG+TGG 0.617899 3_1:-76459674 None:intergenic
GAACTTAATTACCTGTAACC+TGG 0.624723 3_1:-76459677 None:intergenic
GGAGAGAGAAATCAATGACT+GGG 0.628398 3_1:-76458553 None:intergenic
GGTCTTCAAGTTAAACATGA+GGG 0.631580 3_1:+76460979 Msa0376370:CDS
CCAACTCAAAGATACATCCA+TGG 0.632282 3_1:+76458355 Msa0376370:exon
AGGTCTTCAAGTTAAACATG+AGG 0.634626 3_1:+76460978 Msa0376370:CDS
AAATGTACACTCTCTGATGG+AGG 0.638346 3_1:-76459596 None:intergenic
GAGCAGGCAACCCTAGAGCA+AGG 0.643541 3_1:-76460909 None:intergenic
TGTAACCTGGTGGTTTGTGA+GGG 0.645056 3_1:-76459664 None:intergenic
AATGTTCAGCTCACAAACCA+CGG 0.647560 3_1:+76459440 Msa0376370:intron
TTTGAGGGTCATCTGAGGTG+AGG 0.649313 3_1:-76458574 None:intergenic
CAACATTGGAGATCAACTTG+AGG 0.650928 3_1:+76461044 Msa0376370:CDS
TAAGACTCTCAGGAATTCCG+TGG 0.651878 3_1:-76459457 None:intergenic
GTGGATTTGAGGGTCATCTG+AGG 0.655247 3_1:-76458579 None:intergenic
TCGAGCAATCCTCAACAACA+AGG 0.664244 3_1:+76461304 Msa0376370:CDS
TAATATTATTGATGTTACTG+AGG 0.665882 3_1:+76458514 Msa0376370:CDS
AGGTGTGGTTGTGGACATGG+AGG 0.667422 3_1:-76460889 None:intergenic
TATTATCATCAGGTTCTGTG+AGG 0.676843 3_1:-76458496 None:intergenic
AATTCCTGAGAGTCTTATGG+AGG 0.684684 3_1:+76459463 Msa0376370:CDS
GGCAACCCTAGAGCAAGGTG+TGG 0.686730 3_1:-76460904 None:intergenic
CTACAATTACATCATCAGAA+CGG 0.701056 3_1:+76458387 Msa0376370:CDS
GTTAGGCTGTGAGTAACGGG+AGG 0.710883 3_1:+76461264 Msa0376370:intron
GGTGTGGTTGTGGACATGGA+GGG 0.714519 3_1:-76460888 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTATAAAAAT+TGG + chr3_1:76458715-76458734 Msa0376370:intron 0.0%
!! AAAATATATATTTATATTAA+GGG - chr3_1:76458910-76458929 None:intergenic 0.0%
!! AAAAATATATATTTATATTA+AGG - chr3_1:76458911-76458930 None:intergenic 0.0%
!!! TTATTTTATAAAAATTGGAA+AGG + chr3_1:76458720-76458739 Msa0376370:intron 10.0%
!!! TTTGTTGTTAAATTAATATA+AGG + chr3_1:76458869-76458888 Msa0376370:intron 10.0%
!!! TATAAATATATATTTTTGAC+TGG + chr3_1:76458914-76458933 Msa0376370:intron 10.0%
!!! TTCTATATTATAATTTTGTA+TGG + chr3_1:76459176-76459195 Msa0376370:intron 10.0%
!! AACCTTATTATTATTAATAA+CGG + chr3_1:76459263-76459282 Msa0376370:intron 10.0%
!! TTTAAAAAAAAAAAGTCAAT+TGG - chr3_1:76459907-76459926 None:intergenic 10.0%
!! ATTATCAAAGTTTAAAAATA+TGG + chr3_1:76461556-76461575 Msa0376370:three_prime_UTR 10.0%
!! AGGAGAAATTATTATTATTA+TGG + chr3_1:76458740-76458759 Msa0376370:intron 15.0%
!!! TAGCTCAAAATTTAATTTTT+AGG + chr3_1:76458983-76459002 Msa0376370:intron 15.0%
!!! TTTAACATTTTATTTCAACA+AGG + chr3_1:76459144-76459163 Msa0376370:intron 15.0%
!!! TCTTTTCTTTATTTTTTGAA+GGG - chr3_1:76459749-76459768 None:intergenic 15.0%
!!! TTCTTTTCTTTATTTTTTGA+AGG - chr3_1:76459750-76459769 None:intergenic 15.0%
!!! TATTTTCTTATATATAAGAC+CGG + chr3_1:76460406-76460425 Msa0376370:intron 15.0%
!! TCTTTCAAAAAAAGAAAAAA+GGG - chr3_1:76460459-76460478 None:intergenic 15.0%
!! ATCTTTCAAAAAAAGAAAAA+AGG - chr3_1:76460460-76460479 None:intergenic 15.0%
!!! TTTTTTCTTTTTTTGAAAGA+TGG + chr3_1:76460459-76460478 Msa0376370:intron 15.0%
!!! AATTTTGAATTTTTTTTGCT+TGG + chr3_1:76460609-76460628 Msa0376370:intron 15.0%
!!! ATTTTGAATTTTTTTTGCTT+GGG + chr3_1:76460610-76460629 Msa0376370:intron 15.0%
!! TATTGAATATTGATGTAGTT+AGG - chr3_1:76458321-76458340 None:intergenic 20.0%
!! ACATCAATAATATTATCATC+AGG - chr3_1:76458509-76458528 None:intergenic 20.0%
!! TAATATTATTGATGTTACTG+AGG + chr3_1:76458514-76458533 Msa0376370:CDS 20.0%
!!! ATATGAAGGATAATTTTGTA+TGG - chr3_1:76458839-76458858 None:intergenic 20.0%
!! TAAGGTTATGTAAAAAATGA+GGG - chr3_1:76459250-76459269 None:intergenic 20.0%
!! ATAAGGTTATGTAAAAAATG+AGG - chr3_1:76459251-76459270 None:intergenic 20.0%
!! CACCGTTATTAATAATAATA+AGG - chr3_1:76459268-76459287 None:intergenic 20.0%
!!! CCAATCACTAATATTTTTTA+GGG - chr3_1:76460070-76460089 None:intergenic 20.0%
!! CCTAAAAAATATTAGTGATT+GGG + chr3_1:76460068-76460087 Msa0376370:intron 20.0%
!!! GTTGAAAGTATTTTAAATGT+AGG + chr3_1:76460333-76460352 Msa0376370:intron 20.0%
!! ATTAATGTAATACTACTTCA+CGG - chr3_1:76460359-76460378 None:intergenic 20.0%
!!! TTTTGAATTTTTTTTGCTTG+GGG + chr3_1:76460611-76460630 Msa0376370:intron 20.0%
!!! TTTTTTTTGTTGGAAAAAGA+GGG - chr3_1:76460643-76460662 None:intergenic 20.0%
!!! ATTTTTTTTGTTGGAAAAAG+AGG - chr3_1:76460644-76460663 None:intergenic 20.0%
!!! AAATGTCTGATTTTTTTTGT+TGG - chr3_1:76460653-76460672 None:intergenic 20.0%
!!! CATGTGTTCTTTTTATTAAT+TGG + chr3_1:76460700-76460719 Msa0376370:intron 20.0%
!! TAAAATGAGTTAATCACAAT+TGG - chr3_1:76461214-76461233 None:intergenic 20.0%
!! AAAAAATGACATGTATGATA+TGG + chr3_1:76461512-76461531 Msa0376370:exon 20.0%
!! AAAAATATGGATGTTGAATA+TGG + chr3_1:76461569-76461588 Msa0376370:three_prime_UTR 20.0%
!!! ATATGGTTGATGTTAATTAA+TGG + chr3_1:76461586-76461605 Msa0376370:three_prime_UTR 20.0%
! TATCATTTGAGAAAACTACT+AGG - chr3_1:76458676-76458695 None:intergenic 25.0%
! ATTATGGTTAAACATGTCTT+TGG + chr3_1:76458756-76458775 Msa0376370:intron 25.0%
!! TTTGTATGGATTATAAAGTG+CGG - chr3_1:76458825-76458844 None:intergenic 25.0%
! CAAAAGCTAATACTATATGA+AGG - chr3_1:76458853-76458872 None:intergenic 25.0%
! CAAAGTTCTTCGTAAAAATT+TGG - chr3_1:76459083-76459102 None:intergenic 25.0%
! GATATTAATGCCAACTAATA+TGG + chr3_1:76459411-76459430 Msa0376370:intron 25.0%
! ATTTCTCTATTTCATTGTCT+TGG - chr3_1:76459795-76459814 None:intergenic 25.0%
!! AGACCTTTAAAAAGTGTATT+GGG - chr3_1:76459831-76459850 None:intergenic 25.0%
!! TAGACCTTTAAAAAGTGTAT+TGG - chr3_1:76459832-76459851 None:intergenic 25.0%
!!! CACTTTTTAAAGGTCTAAAA+TGG + chr3_1:76459835-76459854 Msa0376370:intron 25.0%
! AACATCATAGACAATAGATA+GGG - chr3_1:76459960-76459979 None:intergenic 25.0%
! AAACATCATAGACAATAGAT+AGG - chr3_1:76459961-76459980 None:intergenic 25.0%
! TCTATTGTCTATGATGTTTA+CGG + chr3_1:76459962-76459981 Msa0376370:intron 25.0%
! AGTGGTAGAATTTATTAATG+CGG - chr3_1:76460011-76460030 None:intergenic 25.0%
! GTACTTATGATGATTAATAG+TGG - chr3_1:76460029-76460048 None:intergenic 25.0%
! CCCTAAAAAATATTAGTGAT+TGG + chr3_1:76460067-76460086 Msa0376370:intron 25.0%
!!! CCCAATCACTAATATTTTTT+AGG - chr3_1:76460071-76460090 None:intergenic 25.0%
!!! TGGATAGTTACTAGTTTTAT+CGG - chr3_1:76460500-76460519 None:intergenic 25.0%
! AGATGACTCAATTATAGAAT+TGG - chr3_1:76460827-76460846 None:intergenic 25.0%
! AATTCTATAATTGAGTCATC+TGG + chr3_1:76460826-76460845 Msa0376370:CDS 25.0%
!! AATTCCATTTTGTATAAGGA+AGG - chr3_1:76460956-76460975 None:intergenic 25.0%
! TTCCTTATACAAAATGGAAT+TGG + chr3_1:76460955-76460974 Msa0376370:CDS 25.0%
! TTTCTTTCTGTAATAGTTCA+GGG - chr3_1:76461391-76461410 None:intergenic 25.0%
!! TTTTCTTTCTGTAATAGTTC+AGG - chr3_1:76461392-76461411 None:intergenic 25.0%
!! TACTTGATACTTTTGAACAA+TGG - chr3_1:76461416-76461435 None:intergenic 25.0%
CTACAATTACATCATCAGAA+CGG + chr3_1:76458387-76458406 Msa0376370:CDS 30.0%
!!! TATAAAGTGCGGCTTTTTTA+GGG - chr3_1:76458814-76458833 None:intergenic 30.0%
!!! TTATAAAGTGCGGCTTTTTT+AGG - chr3_1:76458815-76458834 None:intergenic 30.0%
TTTGTGAGGGAAATTGAATT+GGG - chr3_1:76459654-76459673 None:intergenic 30.0%
!! AACCCCAATACACTTTTTAA+AGG + chr3_1:76459825-76459844 Msa0376370:intron 30.0%
! GACCTTTAAAAAGTGTATTG+GGG - chr3_1:76459830-76459849 None:intergenic 30.0%
ATTTATTAATGCGGGTCTAA+TGG - chr3_1:76460002-76460021 None:intergenic 30.0%
GTGGTAGAATTTATTAATGC+GGG - chr3_1:76460010-76460029 None:intergenic 30.0%
TTCTTATATATAAGACCGGA+AGG + chr3_1:76460410-76460429 Msa0376370:intron 30.0%
!!! GTTACTAGTTTTATCGGATA+GGG - chr3_1:76460494-76460513 None:intergenic 30.0%
!!! AGTTACTAGTTTTATCGGAT+AGG - chr3_1:76460495-76460514 None:intergenic 30.0%
!! CATTAGTGGTGCTTTTAAAA+TGG - chr3_1:76460539-76460558 None:intergenic 30.0%
AATGTTGAAGTCAACATTAG+TGG - chr3_1:76460553-76460572 None:intergenic 30.0%
CGTCTCTGATTTAATTGTAT+TGG - chr3_1:76460589-76460608 None:intergenic 30.0%
TTGACCTTCCTTATACAAAA+TGG + chr3_1:76460949-76460968 Msa0376370:CDS 30.0%
! CTCCAATTCCATTTTGTATA+AGG - chr3_1:76460960-76460979 None:intergenic 30.0%
CTTATACAAAATGGAATTGG+AGG + chr3_1:76460958-76460977 Msa0376370:CDS 30.0%
AAGTTAAACATGAGGGTAAA+TGG + chr3_1:76460986-76461005 Msa0376370:CDS 30.0%
AGTTAAACATGAGGGTAAAT+GGG + chr3_1:76460987-76461006 Msa0376370:CDS 30.0%
GAGTTAATCACAATTGGTAA+TGG - chr3_1:76461208-76461227 None:intergenic 30.0%
TTAACGTATATCCTCTGTAT+TGG + chr3_1:76461242-76461261 Msa0376370:intron 30.0%
! TACTAGAATAAGTCTTGTAG+TGG + chr3_1:76461328-76461347 Msa0376370:CDS 30.0%
TTCTTTCTGTAATAGTTCAG+GGG - chr3_1:76461390-76461409 None:intergenic 30.0%
GATTGCAATCATGTAGGATT+AGG - chr3_1:76458294-76458313 None:intergenic 35.0%
ATTATCATCAGGTTCTGTGA+GGG - chr3_1:76458498-76458517 None:intergenic 35.0%
TATTATCATCAGGTTCTGTG+AGG - chr3_1:76458499-76458518 None:intergenic 35.0%
! CAGTTTTTGTGTGGATTTGA+GGG - chr3_1:76458592-76458611 None:intergenic 35.0%
! ACAGTTTTTGTGTGGATTTG+AGG - chr3_1:76458593-76458612 None:intergenic 35.0%
! GTTCATGAACAGTTTTTGTG+TGG - chr3_1:76458601-76458620 None:intergenic 35.0%
GAGAAAACTACTAGGTAGAA+AGG - chr3_1:76458668-76458687 None:intergenic 35.0%
!!! ATAAAGTGCGGCTTTTTTAG+GGG - chr3_1:76458813-76458832 None:intergenic 35.0%
! TTGCGTTTGAGATTTATGCT+CGG + chr3_1:76459312-76459331 Msa0376370:intron 35.0%
CAAGTTCTTAGTTATCAGAG+AGG + chr3_1:76459358-76459377 Msa0376370:intron 35.0%
CAAAAATGTACACTCTCTGA+TGG - chr3_1:76459602-76459621 None:intergenic 35.0%
!! CATCAGAGAGTGTACATTTT+TGG + chr3_1:76459600-76459619 Msa0376370:CDS 35.0%
TTGTGAGGGAAATTGAATTG+GGG - chr3_1:76459653-76459672 None:intergenic 35.0%
GTTTGTGAGGGAAATTGAAT+TGG - chr3_1:76459655-76459674 None:intergenic 35.0%
GAACTTAATTACCTGTAACC+TGG - chr3_1:76459680-76459699 None:intergenic 35.0%
TCTAGTCATGTCAACATTCT+CGG - chr3_1:76460099-76460118 None:intergenic 35.0%
TGTTCCGTTGATGTTTAATG+TGG + chr3_1:76460123-76460142 Msa0376370:intron 35.0%
GTTCCGTTGATGTTTAATGT+GGG + chr3_1:76460124-76460143 Msa0376370:intron 35.0%
TTCCGTTGATGTTTAATGTG+GGG + chr3_1:76460125-76460144 Msa0376370:intron 35.0%
TGACACTCAAGTCAGTAAAT+GGG + chr3_1:76460166-76460185 Msa0376370:intron 35.0%
! ATGAAGGGCACAATTTGTAA+TGG - chr3_1:76460299-76460318 None:intergenic 35.0%
TTACAAATTGTGCCCTTCAT+TGG + chr3_1:76460299-76460318 Msa0376370:intron 35.0%
TCCACATTAAATACTCCTTC+CGG - chr3_1:76460428-76460447 None:intergenic 35.0%
TAATTGGTCAACATTTGTGC+AGG + chr3_1:76460716-76460735 Msa0376370:intron 35.0%
AATTGGTCAACATTTGTGCA+GGG + chr3_1:76460717-76460736 Msa0376370:intron 35.0%
TAGCCAAAAAATCACATGTG+TGG + chr3_1:76460756-76460775 Msa0376370:CDS 35.0%
!!! TTGCCACACATGTGATTTTT+TGG - chr3_1:76460762-76460781 None:intergenic 35.0%
AAAAAATCACATGTGTGGCA+AGG + chr3_1:76460761-76460780 Msa0376370:CDS 35.0%
! AGGTCTTCAAGTTAAACATG+AGG + chr3_1:76460978-76460997 Msa0376370:CDS 35.0%
! GGTCTTCAAGTTAAACATGA+GGG + chr3_1:76460979-76460998 Msa0376370:CDS 35.0%
ATGTTGACAACTAAGCAGTT+GGG - chr3_1:76461030-76461049 None:intergenic 35.0%
AATGTTGACAACTAAGCAGT+TGG - chr3_1:76461031-76461050 None:intergenic 35.0%
AACTGCTTAGTTGTCAACAT+TGG + chr3_1:76461030-76461049 Msa0376370:CDS 35.0%
!! GTATATCCTCTGTATTGGTT+AGG + chr3_1:76461247-76461266 Msa0376370:intron 35.0%
!! TTCTAGTATCCTTGTTGTTG+AGG - chr3_1:76461316-76461335 None:intergenic 35.0%
! ATAAGTCTTGTAGTGGTGAA+TGG + chr3_1:76461335-76461354 Msa0376370:CDS 35.0%
GGAAGTGATTGCAATCATGT+AGG - chr3_1:76458300-76458319 None:intergenic 40.0%
CCATGGATGTATCTTTGAGT+TGG - chr3_1:76458358-76458377 None:intergenic 40.0%
CCAACTCAAAGATACATCCA+TGG + chr3_1:76458355-76458374 Msa0376370:exon 40.0%
AATTGTAGTTGCTGAAGCCA+TGG - chr3_1:76458375-76458394 None:intergenic 40.0%
TTCATGCATCAAAGCCTTTG+CGG + chr3_1:76458433-76458452 Msa0376370:CDS 40.0%
AAAGCCTTTGCGGAATCAAA+TGG + chr3_1:76458443-76458462 Msa0376370:CDS 40.0%
GTAATTGGAAGGAATGAGAG+AGG - chr3_1:76458471-76458490 None:intergenic 40.0%
AGAGAAATCAATGACTGGGA+TGG - chr3_1:76458552-76458571 None:intergenic 40.0%
GGAGAGAGAAATCAATGACT+GGG - chr3_1:76458556-76458575 None:intergenic 40.0%
AGGAGAGAGAAATCAATGAC+TGG - chr3_1:76458557-76458576 None:intergenic 40.0%
AACTGTTCATGAACTTGCCA+AGG + chr3_1:76458607-76458626 Msa0376370:CDS 40.0%
TTCTGAATGGGGTTTCTTCA+TGG + chr3_1:76458634-76458653 Msa0376370:CDS 40.0%
CATTGGGAGACCATATTAGT+TGG - chr3_1:76459424-76459443 None:intergenic 40.0%
! TGGTTTGTGAGCTGAACATT+GGG - chr3_1:76459440-76459459 None:intergenic 40.0%
AATGTTCAGCTCACAAACCA+CGG + chr3_1:76459440-76459459 Msa0376370:intron 40.0%
! AATTCCTGAGAGTCTTATGG+AGG + chr3_1:76459463-76459482 Msa0376370:CDS 40.0%
! TCACGAGTTTCATGATTTGC+CGG + chr3_1:76459502-76459521 Msa0376370:CDS 40.0%
! AAGAAGGAGTTTGGTGACAA+TGG + chr3_1:76459533-76459552 Msa0376370:CDS 40.0%
AAATGTACACTCTCTGATGG+AGG - chr3_1:76459599-76459618 None:intergenic 40.0%
CTTAATTACCTGTAACCTGG+TGG - chr3_1:76459677-76459696 None:intergenic 40.0%
CACCCCACATTAAACATCAA+CGG - chr3_1:76460130-76460149 None:intergenic 40.0%
CTGACACTCAAGTCAGTAAA+TGG + chr3_1:76460165-76460184 Msa0376370:intron 40.0%
GTATTTATACCGTCTCGACA+AGG + chr3_1:76460249-76460268 Msa0376370:intron 40.0%
AAGGAGTTGTTGAGGAGTAA+AGG + chr3_1:76460268-76460287 Msa0376370:intron 40.0%
AGGAGTTGTTGAGGAGTAAA+GGG + chr3_1:76460269-76460288 Msa0376370:intron 40.0%
CACTAGAACACACCAATGAA+GGG - chr3_1:76460314-76460333 None:intergenic 40.0%
ACACTAGAACACACCAATGA+AGG - chr3_1:76460315-76460334 None:intergenic 40.0%
!! ACCGGAAGGAGTATTTAATG+TGG + chr3_1:76460424-76460443 Msa0376370:intron 40.0%
!!! TGCTTTTAAAATGGACCGCT+AGG - chr3_1:76460530-76460549 None:intergenic 40.0%
! GTGGCAAGGAAATTGATTCA+AGG + chr3_1:76460775-76460794 Msa0376370:CDS 40.0%
GGATTCTAATCCTAAGCTCT+CGG - chr3_1:76460806-76460825 None:intergenic 40.0%
! TGACTCTGGCTTACAAATCA+TGG + chr3_1:76460852-76460871 Msa0376370:CDS 40.0%
ACAACTAAGCAGTTGGGAAT+GGG - chr3_1:76461024-76461043 None:intergenic 40.0%
CAACATTGGAGATCAACTTG+AGG + chr3_1:76461044-76461063 Msa0376370:CDS 40.0%
ATTGGTTAGGCTGTGAGTAA+CGG + chr3_1:76461260-76461279 Msa0376370:intron 40.0%
AGTCACGATTGTCAGATGAA+AGG + chr3_1:76461462-76461481 Msa0376370:CDS 40.0%
GTCACGATTGTCAGATGAAA+GGG + chr3_1:76461463-76461482 Msa0376370:CDS 40.0%
ATTGTCAGATGAAAGGGCTT+TGG + chr3_1:76461469-76461488 Msa0376370:CDS 40.0%
! TTTTAGCACTATACCGAACC+TGG - chr3_1:76461496-76461515 None:intergenic 40.0%
!! ATGGTCTTGTCTAGTTCTAG+AGG + chr3_1:76461531-76461550 Msa0376370:three_prime_UTR 40.0%
GGTTCCATTTGATTCCGCAA+AGG - chr3_1:76458450-76458469 None:intergenic 45.0%
TTCTGTGAGGGAGTGGTAAT+TGG - chr3_1:76458486-76458505 None:intergenic 45.0%
! TTGCCAAGGCATGTTCTGAA+TGG + chr3_1:76458621-76458640 Msa0376370:CDS 45.0%
! TGCCAAGGCATGTTCTGAAT+GGG + chr3_1:76458622-76458641 Msa0376370:CDS 45.0%
! GTGGTTTGTGAGCTGAACAT+TGG - chr3_1:76459441-76459460 None:intergenic 45.0%
TAAGACTCTCAGGAATTCCG+TGG - chr3_1:76459460-76459479 None:intergenic 45.0%
CGGAATTCCTGAGAGTCTTA+TGG + chr3_1:76459460-76459479 Msa0376370:CDS 45.0%
AACTCCTCCATAAGACTCTC+AGG - chr3_1:76459470-76459489 None:intergenic 45.0%
! AACTCCTTCTTTTCCTCCAC+CGG - chr3_1:76459524-76459543 None:intergenic 45.0%
GTGGAGGAAAAGAAGGAGTT+TGG + chr3_1:76459524-76459543 Msa0376370:CDS 45.0%
AATTTCCCTCACAAACCACC+AGG + chr3_1:76459659-76459678 Msa0376370:CDS 45.0%
! TGTAACCTGGTGGTTTGTGA+GGG - chr3_1:76459667-76459686 None:intergenic 45.0%
CGTTGATGTTTAATGTGGGG+TGG + chr3_1:76460128-76460147 Msa0376370:intron 45.0%
TCAACAACTCCTTGTCGAGA+CGG - chr3_1:76460261-76460280 None:intergenic 45.0%
CAAGGAATATCCGAGAGCTT+AGG + chr3_1:76460793-76460812 Msa0376370:CDS 45.0%
!!! GAGTCATCTGGTTTTGACTC+TGG + chr3_1:76460838-76460857 Msa0376370:CDS 45.0%
TTGCCTGCTCATTCTGATGT+TGG + chr3_1:76460922-76460941 Msa0376370:CDS 45.0%
AAGCCAACATCAGAATGAGC+AGG - chr3_1:76460928-76460947 None:intergenic 45.0%
GACAACTAAGCAGTTGGGAA+TGG - chr3_1:76461025-76461044 None:intergenic 45.0%
TCACAGCCTAACCAATACAG+AGG - chr3_1:76461256-76461275 None:intergenic 45.0%
TTGGTTAGGCTGTGAGTAAC+GGG + chr3_1:76461261-76461280 Msa0376370:intron 45.0%
TCGAGCAATCCTCAACAACA+AGG + chr3_1:76461304-76461323 Msa0376370:CDS 45.0%
CCAACATCTCTATCTTCTGC+AGG - chr3_1:76461362-76461381 None:intergenic 45.0%
CCTGCAGAAGATAGAGATGT+TGG + chr3_1:76461359-76461378 Msa0376370:CDS 45.0%
TTCTGTAATAGTTCAGGGGC+AGG - chr3_1:76461386-76461405 None:intergenic 45.0%
!!! TTTTTTAACATTTATTTATT+TGG - chr3_1:76461671-76461690 None:intergenic 5.0%
GTGAGGGAGTGGTAATTGGA+AGG - chr3_1:76458482-76458501 None:intergenic 50.0%
! TTTGAGGGTCATCTGAGGTG+AGG - chr3_1:76458577-76458596 None:intergenic 50.0%
GTGGATTTGAGGGTCATCTG+AGG - chr3_1:76458582-76458601 None:intergenic 50.0%
! GCCAAGGCATGTTCTGAATG+GGG + chr3_1:76458623-76458642 Msa0376370:CDS 50.0%
ACCCCATTCAGAACATGCCT+TGG - chr3_1:76458627-76458646 None:intergenic 50.0%
! CGAGTTTCATGATTTGCCGG+TGG + chr3_1:76459505-76459524 Msa0376370:CDS 50.0%
! GTTTCATGATTTGCCGGTGG+AGG + chr3_1:76459508-76459527 Msa0376370:CDS 50.0%
TTTGCCGGTGGAGGAAAAGA+AGG + chr3_1:76459517-76459536 Msa0376370:CDS 50.0%
AAGCTAGTGCCATGCCTGAT+GGG - chr3_1:76459572-76459591 None:intergenic 50.0%
GTACACTCTCTGATGGAGGA+TGG - chr3_1:76459595-76459614 None:intergenic 50.0%
! CTGTAACCTGGTGGTTTGTG+AGG - chr3_1:76459668-76459687 None:intergenic 50.0%
CTCACAAACCACCAGGTTAC+AGG + chr3_1:76459666-76459685 Msa0376370:CDS 50.0%
GTCTCGACAAGGAGTTGTTG+AGG + chr3_1:76460260-76460279 Msa0376370:intron 50.0%
ACTATCCAATGCGAGCCTAG+CGG + chr3_1:76460512-76460531 Msa0376370:intron 50.0%
CACAACCACACCTTGCTCTA+GGG + chr3_1:76460899-76460918 Msa0376370:CDS 50.0%
!! AGATGAAAGGGCTTTGGACC+AGG + chr3_1:76461475-76461494 Msa0376370:CDS 50.0%
!! AAAGGGCTTTGGACCAGGTT+CGG + chr3_1:76461480-76461499 Msa0376370:CDS 50.0%
CATCAGGTTCTGTGAGGGAG+TGG - chr3_1:76458493-76458512 None:intergenic 55.0%
GTGAGCCTTTCTCACCCATC+AGG + chr3_1:76459555-76459574 Msa0376370:CDS 55.0%
! CCATGCCTGATGGGTGAGAA+AGG - chr3_1:76459563-76459582 None:intergenic 55.0%
CCTTTCTCACCCATCAGGCA+TGG + chr3_1:76459560-76459579 Msa0376370:CDS 55.0%
GAAGCTAGTGCCATGCCTGA+TGG - chr3_1:76459573-76459592 None:intergenic 55.0%
GGTGTGGTTGTGGACATGGA+GGG - chr3_1:76460891-76460910 None:intergenic 55.0%
AGGTGTGGTTGTGGACATGG+AGG - chr3_1:76460892-76460911 None:intergenic 55.0%
GCAAGGTGTGGTTGTGGACA+TGG - chr3_1:76460895-76460914 None:intergenic 55.0%
CCTAGAGCAAGGTGTGGTTG+TGG - chr3_1:76460901-76460920 None:intergenic 55.0%
CCACAACCACACCTTGCTCT+AGG + chr3_1:76460898-76460917 Msa0376370:CDS 55.0%
! GTTAGGCTGTGAGTAACGGG+AGG + chr3_1:76461264-76461283 Msa0376370:intron 55.0%
ATGGACCGCTAGGCTCGCAT+TGG - chr3_1:76460520-76460539 None:intergenic 60.0%
GGCAACCCTAGAGCAAGGTG+TGG - chr3_1:76460907-76460926 None:intergenic 60.0%
GAGCAGGCAACCCTAGAGCA+AGG - chr3_1:76460912-76460931 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 76458239 76461701 76458239 ID=Msa0376370;Name=Msa0376370
chr3_1 mRNA 76458239 76461701 76458239 ID=Msa0376370-mRNA-1;Parent=Msa0376370;Name=Msa0376370-mRNA-1;_AED=0.09;_eAED=0.09;_QI=135|1|1|1|1|1|4|181|366
chr3_1 exon 76458239 76458655 76458239 ID=Msa0376370-mRNA-1:exon:18139;Parent=Msa0376370-mRNA-1
chr3_1 exon 76459449 76459687 76459449 ID=Msa0376370-mRNA-1:exon:18140;Parent=Msa0376370-mRNA-1
chr3_1 exon 76460738 76461065 76460738 ID=Msa0376370-mRNA-1:exon:18141;Parent=Msa0376370-mRNA-1
chr3_1 exon 76461269 76461701 76461269 ID=Msa0376370-mRNA-1:exon:18142;Parent=Msa0376370-mRNA-1
chr3_1 five_prime_UTR 76458239 76458373 76458239 ID=Msa0376370-mRNA-1:five_prime_utr;Parent=Msa0376370-mRNA-1
chr3_1 CDS 76458374 76458655 76458374 ID=Msa0376370-mRNA-1:cds;Parent=Msa0376370-mRNA-1
chr3_1 CDS 76459449 76459687 76459449 ID=Msa0376370-mRNA-1:cds;Parent=Msa0376370-mRNA-1
chr3_1 CDS 76460738 76461065 76460738 ID=Msa0376370-mRNA-1:cds;Parent=Msa0376370-mRNA-1
chr3_1 CDS 76461269 76461520 76461269 ID=Msa0376370-mRNA-1:cds;Parent=Msa0376370-mRNA-1
chr3_1 three_prime_UTR 76461521 76461701 76461521 ID=Msa0376370-mRNA-1:three_prime_utr;Parent=Msa0376370-mRNA-1
Gene Sequence

>Msa0376370

ATGGCTTCAGCAACTACAATTACATCATCAGAACGGACAAAAGTTCATACATCAAATATTTCATGCATCAAAGCCTTTGCGGAATCAAATGGAACCTCTCTCATTCCTTCCAATTACCACTCCCTCACAGAACCTGATGATAATATTATTGATGTTACTGAGGAGCTTGCAGCTTCCATCCCAGTCATTGATTTCTCTCTCCTCACCTCAGATGACCCTCAAATCCACACAAAAACTGTTCATGAACTTGCCAAGGCATGTTCTGAATGGGGTTTCTTCATGCTCACAAACCACGGAATTCCTGAGAGTCTTATGGAGGAGTTGATGAAAAAATCTCACGAGTTTCATGATTTGCCGGTGGAGGAAAAGAAGGAGTTTGGTGACAATGGTGAGCCTTTCTCACCCATCAGGCATGGCACTAGCTTCCATCCTCCATCAGAGAGTGTACATTTTTGGAGAGATTATCTCAAAGTCTTAACATCTCCCCAATTCAATTTCCCTCACAAACCACCAGGTTACAGGGAAGTTGCATTTGAGTATAGCCAAAAAATCACATGTGTGGCAAGGAAATTGATTCAAGGAATATCCGAGAGCTTAGGATTAGAATCCAATTCTATAATTGAGTCATCTGGTTTTGACTCTGGCTTACAAATCATGGCTGTGAACTTGTACCCTCCATGTCCACAACCACACCTTGCTCTAGGGTTGCCTGCTCATTCTGATGTTGGCTTCTTGACCTTCCTTATACAAAATGGAATTGGAGGTCTTCAAGTTAAACATGAGGGTAAATGGGTCAATGTGAATCCCATTCCCAACTGCTTAGTTGTCAACATTGGAGATCAACTTGAGGCTGTGAGTAACGGGAGGTATGAGAGTGTGTTACATCGAGCAATCCTCAACAACAAGGATACTAGAATAAGTCTTGTAGTGGTGAATGGACCTGCAGAAGATAGAGATGTTGGACCTGCCCCTGAACTATTACAGAAAGAAAAGCCATTGTTCAAAAGTATCAAGTATCGTGATTATTTCTTAGTTCAGCAGAAGTCACGATTGTCAGATGAAAGGGCTTTGGACCAGGTTCGGTATAGTGCTAAAAAATGA
Protein sequence

>Msa0376370

MASATTITSSERTKVHTSNISCIKAFAESNGTSLIPSNYHSLTEPDDNIIDVTEELAASIPVIDFSLLTSDDPQIHTKTVHELAKACSEWGFFMLTNHGIPESLMEELMKKSHEFHDLPVEEKKEFGDNGEPFSPIRHGTSFHPPSESVHFWRDYLKVLTSPQFNFPHKPPGYREVAFEYSQKITCVARKLIQGISESLGLESNSIIESSGFDSGLQIMAVNLYPPCPQPHLALGLPAHSDVGFLTFLIQNGIGGLQVKHEGKWVNVNPIPNCLVVNIGDQLEAVSNGRYESVLHRAILNNKDTRISLVVVNGPAEDRDVGPAPELLQKEKPLFKSIKYRDYFLVQQKSRLSDERALDQVRYSAKK*