AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0424830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424830 MtrunA17_Chr3g0126741 92.350 366 27 1 1 366 1 365 0.0 698
Msa0424830 MtrunA17_Chr5g0426891 47.507 341 174 4 23 361 4 341 3.37e-109 323
Msa0424830 MtrunA17_Chr3g0126761 83.854 192 31 0 174 365 44 235 7.06e-109 318
Msa0424830 MtrunA17_Chr4g0050031 43.562 365 202 2 1 361 1 365 2.88e-107 319
Msa0424830 MtrunA17_Chr8g0345831 40.777 309 170 6 59 361 41 342 3.08e-74 233
Msa0424830 MtrunA17_Chr1g0179801 37.304 319 175 8 30 332 33 342 3.16e-67 216
Msa0424830 MtrunA17_Chr7g0265221 37.282 287 162 4 60 332 67 349 1.28e-65 213
Msa0424830 MtrunA17_Chr3g0128001 37.582 306 176 7 59 358 37 333 2.16e-64 208
Msa0424830 MtrunA17_Chr7g0242551 35.135 333 202 7 23 344 15 344 8.17e-64 207
Msa0424830 MtrunA17_Chr5g0423251 36.716 335 193 8 35 361 24 347 4.96e-63 205
Msa0424830 MtrunA17_Chr5g0420941 34.181 354 214 8 16 361 3 345 6.96e-62 202
Msa0424830 MtrunA17_Chr8g0375671 37.461 323 190 6 46 361 39 356 7.10e-62 202
Msa0424830 MtrunA17_Chr5g0424201 34.462 325 200 6 25 343 10 327 2.38e-61 200
Msa0424830 MtrunA17_Chr7g0250511 35.783 313 187 8 56 361 45 350 3.59e-61 200
Msa0424830 MtrunA17_Chr5g0398291 35.463 313 192 4 30 332 14 326 4.88e-61 200
Msa0424830 MtrunA17_Chr5g0423191 35.224 335 198 8 35 361 24 347 1.76e-60 198
Msa0424830 MtrunA17_Chr8g0375571 38.699 292 166 6 60 343 45 331 4.83e-60 197
Msa0424830 MtrunA17_Chr5g0421041 34.659 352 204 10 20 361 10 345 1.14e-59 196
Msa0424830 MtrunA17_Chr8g0375601 37.421 318 177 8 60 365 48 355 1.82e-59 196
Msa0424830 MtrunA17_Chr5g0421091 36.023 347 203 10 23 361 11 346 2.87e-59 195
Msa0424830 MtrunA17_Chr5g0412681 36.824 296 161 7 56 342 29 307 3.82e-59 194
Msa0424830 MtrunA17_Chr5g0412651 35.855 304 155 6 59 342 37 320 3.91e-59 194
Msa0424830 MtrunA17_Chr5g0423201 36.418 335 195 8 35 361 24 348 2.75e-58 192
Msa0424830 MtrunA17_Chr4g0066121 37.092 337 194 12 10 341 16 339 3.37e-58 192
Msa0424830 MtrunA17_Chr5g0420951 35.127 316 191 6 57 365 50 358 5.44e-58 192
Msa0424830 MtrunA17_Chr4g0006371 34.354 294 183 5 59 344 61 352 5.48e-58 192
Msa0424830 MtrunA17_Chr1g0184161 35.647 317 183 8 35 342 15 319 7.64e-58 191
Msa0424830 MtrunA17_Chr2g0314381 33.524 349 217 7 20 361 39 379 5.60e-57 190
Msa0424830 MtrunA17_Chr5g0421011 37.540 309 178 6 60 361 47 347 5.87e-57 189
Msa0424830 MtrunA17_Chr1g0187821 33.429 350 210 11 2 341 8 344 8.73e-57 189
Msa0424830 MtrunA17_Chr3g0114861 38.699 292 166 4 57 342 37 321 1.22e-56 187
Msa0424830 MtrunA17_Chr3g0113641 33.019 318 201 6 35 344 26 339 1.59e-56 188
Msa0424830 MtrunA17_Chr8g0336761 34.821 336 185 10 24 341 19 338 4.62e-56 187
Msa0424830 MtrunA17_Chr5g0420901 34.018 341 208 7 28 361 16 346 8.32e-56 186
Msa0424830 MtrunA17_Chr5g0423221 33.333 336 204 9 35 361 48 372 8.79e-56 187
Msa0424830 MtrunA17_Chr5g0412671 36.082 291 172 6 59 342 37 320 9.70e-56 186
Msa0424830 MtrunA17_Chr5g0420981 34.421 337 200 8 35 361 29 354 1.05e-55 186
Msa0424830 MtrunA17_Chr8g0336631 32.670 352 217 8 24 361 19 364 1.09e-55 186
Msa0424830 MtrunA17_Chr3g0109041 34.969 326 190 9 30 342 16 332 1.28e-55 186
Msa0424830 MtrunA17_Chr8g0354261 35.962 317 189 8 59 366 67 378 2.21e-55 186
Msa0424830 MtrunA17_Chr8g0365241 35.275 309 186 6 60 361 57 358 2.65e-55 185
Msa0424830 MtrunA17_Chr5g0437181 33.435 329 208 7 23 344 14 338 3.94e-55 184
Msa0424830 MtrunA17_Chr8g0348081 32.578 353 215 9 24 361 19 363 4.49e-55 184
Msa0424830 MtrunA17_Chr7g0239101 33.127 323 199 7 50 364 45 358 5.25e-55 184
Msa0424830 MtrunA17_Chr3g0093741 38.408 289 166 7 59 343 55 335 8.68e-55 183
Msa0424830 MtrunA17_Chr1g0184151 35.016 317 185 8 35 342 15 319 1.20e-54 183
Msa0424830 MtrunA17_Chr7g0239111 33.438 317 193 8 35 343 31 337 1.47e-54 183
Msa0424830 MtrunA17_Chr3g0093761 36.061 330 189 9 23 343 18 334 1.62e-54 183
Msa0424830 MtrunA17_Chr2g0314401 34.628 309 189 6 60 361 51 353 2.46e-54 182
Msa0424830 MtrunA17_Chr8g0336851 33.333 336 212 8 31 361 35 363 3.00e-54 182
Msa0424830 MtrunA17_Chr2g0311631 33.535 331 200 9 23 343 22 342 4.27e-54 182
Msa0424830 MtrunA17_Chr5g0424211 31.230 317 204 5 23 332 6 315 9.52e-54 180
Msa0424830 MtrunA17_Chr1g0187811 32.759 348 204 11 9 332 121 462 1.06e-53 184
Msa0424830 MtrunA17_Chr8g0336781 32.754 345 218 10 23 361 63 399 1.42e-53 182
Msa0424830 MtrunA17_Chr2g0311741 36.644 292 170 9 58 342 25 308 2.02e-53 179
Msa0424830 MtrunA17_Chr3g0125201 36.594 276 164 6 59 330 2 270 3.88e-53 178
Msa0424830 MtrunA17_Chr7g0225881 36.860 293 166 9 60 342 67 350 4.52e-53 179
Msa0424830 MtrunA17_Chr2g0314391 34.375 352 205 8 30 361 27 372 5.17e-53 179
Msa0424830 MtrunA17_Chr2g0311681 32.407 324 204 8 30 343 33 351 6.09e-53 179
Msa0424830 MtrunA17_Chr7g0239821 35.473 296 174 7 56 343 60 346 1.02e-52 179
Msa0424830 MtrunA17_Chr5g0421101 34.839 310 187 6 59 361 46 347 1.12e-52 178
Msa0424830 MtrunA17_Chr3g0093751 37.370 289 169 7 59 343 55 335 2.63e-52 177
Msa0424830 MtrunA17_Chr2g0311691 32.817 323 204 6 30 343 33 351 3.90e-52 177
Msa0424830 MtrunA17_Chr1g0162191 37.113 291 170 6 60 343 47 331 5.72e-52 176
Msa0424830 MtrunA17_Chr7g0265351 38.095 294 160 9 59 343 38 318 7.54e-52 175
Msa0424830 MtrunA17_Chr7g0239121 30.448 335 216 9 35 361 27 352 2.33e-51 175
Msa0424830 MtrunA17_Chr1g0187831 31.525 387 229 14 7 366 1 378 2.97e-51 175
Msa0424830 MtrunA17_Chr8g0371921 35.401 274 157 8 60 322 39 303 3.62e-51 174
Msa0424830 MtrunA17_Chr4g0045411 34.915 295 168 7 56 332 26 314 9.50e-51 173
Msa0424830 MtrunA17_Chr5g0423211 34.006 347 202 11 28 361 17 349 1.68e-50 172
Msa0424830 MtrunA17_Chr2g0311711 32.099 324 202 9 30 343 37 352 2.03e-50 172
Msa0424830 MtrunA17_Chr8g0371931 35.036 274 158 8 60 322 39 303 5.71e-50 171
Msa0424830 MtrunA17_Chr6g0472861 35.505 307 183 8 59 357 69 368 6.05e-50 171
Msa0424830 MtrunA17_Chr7g0235951 31.180 356 218 12 2 343 12 354 7.28e-50 171
Msa0424830 MtrunA17_Chr2g0311701 32.660 297 181 7 59 343 68 357 1.08e-49 171
Msa0424830 MtrunA17_Chr1g0184101 32.886 298 189 4 51 343 29 320 1.34e-49 169
Msa0424830 MtrunA17_Chr2g0311921 33.442 308 195 8 60 361 54 357 2.05e-49 169
Msa0424830 MtrunA17_Chr8g0354241 33.968 315 198 7 59 366 67 378 4.27e-49 169
Msa0424830 MtrunA17_Chr8g0336861 33.138 341 213 11 8 342 14 345 5.04e-49 169
Msa0424830 MtrunA17_Chr2g0296371 33.866 313 187 7 58 358 48 352 5.16e-49 169
Msa0424830 MtrunA17_Chr4g0045441 33.234 337 178 9 57 361 23 344 5.65e-49 168
Msa0424830 MtrunA17_Chr8g0375681 35.401 274 166 5 95 361 15 284 9.14e-49 166
Msa0424830 MtrunA17_Chr8g0364471 28.989 376 235 12 3 357 4 368 2.39e-48 167
Msa0424830 MtrunA17_Chr4g0045451 32.344 337 186 9 57 362 23 348 2.70e-48 166
Msa0424830 MtrunA17_Chr3g0087031 33.013 312 193 8 57 361 57 359 2.92e-48 167
Msa0424830 MtrunA17_Chr1g0184121 33.333 291 184 4 56 341 33 318 8.17e-48 165
Msa0424830 MtrunA17_Chr1g0184111 33.447 293 185 4 56 343 33 320 8.26e-48 165
Msa0424830 MtrunA17_Chr7g0220011 35.135 296 175 8 57 345 36 321 8.48e-48 164
Msa0424830 MtrunA17_Chr3g0102041 34.767 279 162 8 55 322 34 303 2.13e-47 164
Msa0424830 MtrunA17_Chr2g0311831 31.124 347 212 10 14 342 14 351 2.73e-47 164
Msa0424830 MtrunA17_Chr6g0455481 33.893 298 181 7 52 342 34 322 4.13e-47 163
Msa0424830 MtrunA17_Chr3g0145171 32.667 300 188 9 60 350 52 346 1.15e-46 162
Msa0424830 MtrunA17_Chr3g0114871 35.918 245 141 5 60 299 42 275 1.79e-46 159
Msa0424830 MtrunA17_Chr8g0336751 31.471 340 218 10 23 358 59 387 2.38e-46 162
Msa0424830 MtrunA17_Chr4g0055591 30.966 352 220 10 1 341 1 340 4.78e-46 160
Msa0424830 MtrunA17_Chr4g0045471 33.962 318 176 9 57 348 23 332 7.36e-46 160
Msa0424830 MtrunA17_Chr7g0232161 34.815 270 159 7 35 297 36 295 8.99e-46 159
Msa0424830 MtrunA17_Chr2g0311861 30.769 377 214 12 1 361 1 346 1.17e-45 159
Msa0424830 MtrunA17_Chr7g0266651 33.131 329 196 11 23 342 24 337 1.39e-45 160
Msa0424830 MtrunA17_Chr8g0375701 31.629 313 192 9 59 361 54 354 1.83e-45 159
Msa0424830 MtrunA17_Chr4g0045431 32.239 335 184 9 57 361 23 344 2.08e-45 159
Msa0424830 MtrunA17_Chr7g0220001 34.066 273 166 4 59 326 40 303 4.20e-45 157
Msa0424830 MtrunA17_Chr2g0311761 31.940 335 205 9 14 332 14 341 4.50e-45 159
Msa0424830 MtrunA17_Chr8g0370711 32.558 301 188 9 60 350 52 347 5.51e-45 158
Msa0424830 MtrunA17_Chr8g0335411 33.033 333 200 10 23 343 33 354 6.04e-45 158
Msa0424830 MtrunA17_Chr5g0405411 32.526 289 180 8 55 335 34 315 7.13e-45 157
Msa0424830 MtrunA17_Chr4g0066991 31.638 354 199 12 2 343 12 334 3.01e-44 156
Msa0424830 MtrunA17_Chr4g0064781 31.210 314 192 8 60 363 50 349 3.40e-44 155
Msa0424830 MtrunA17_Chr1g0162361 32.013 303 170 8 60 342 27 313 7.07e-44 154
Msa0424830 MtrunA17_Chr3g0121141 30.508 295 180 7 59 343 3 282 9.46e-44 153
Msa0424830 MtrunA17_Chr7g0247991 33.140 344 195 11 23 343 23 354 3.54e-43 154
Msa0424830 MtrunA17_Chr3g0145181 29.688 320 205 8 45 348 25 340 6.36e-43 152
Msa0424830 MtrunA17_Chr1g0167911 32.641 337 193 12 23 341 10 330 1.17e-42 152
Msa0424830 MtrunA17_Chr8g0370721 31.353 303 189 9 60 350 52 347 1.28e-42 151
Msa0424830 MtrunA17_Chr5g0439011 32.979 282 170 6 56 330 1 270 1.72e-42 150
Msa0424830 MtrunA17_Chr7g0236011 32.353 374 224 14 1 358 9 369 2.92e-42 151
Msa0424830 MtrunA17_Chr7g0239071 32.000 275 172 7 93 358 29 297 5.28e-42 149
Msa0424830 MtrunA17_Chr2g0332191 31.138 334 198 11 30 348 23 339 4.38e-41 148
Msa0424830 MtrunA17_Chr5g0420721 34.400 250 153 5 119 361 4 249 4.41e-41 145
Msa0424830 MtrunA17_Chr1g0161111 33.636 330 198 11 21 344 94 408 5.97e-41 149
Msa0424830 MtrunA17_Chr1g0184241 30.094 319 203 7 51 361 60 366 6.10e-41 147
Msa0424830 MtrunA17_Chr1g0158021 36.207 232 135 6 47 276 40 260 8.67e-41 144
Msa0424830 MtrunA17_Chr3g0145201 30.375 293 193 7 60 345 684 972 4.30e-40 151
Msa0424830 MtrunA17_Chr1g0167951 30.199 351 213 10 7 344 1 332 8.55e-40 144
Msa0424830 MtrunA17_Chr6g0474391 31.013 316 193 5 60 358 64 371 1.11e-39 144
Msa0424830 MtrunA17_Chr2g0289341 29.795 292 188 7 59 343 3 284 2.57e-39 142
Msa0424830 MtrunA17_Chr1g0162351 31.804 327 172 8 57 348 66 376 4.15e-39 143
Msa0424830 MtrunA17_Chr1g0162321 32.416 327 170 9 57 348 66 376 7.71e-39 142
Msa0424830 MtrunA17_Chr1g0204181 30.696 316 194 6 60 358 59 366 1.06e-38 142
Msa0424830 MtrunA17_Chr4g0011311 31.868 273 168 8 23 284 23 288 1.42e-38 140
Msa0424830 MtrunA17_Chr1g0161081 32.743 339 203 11 21 351 35 356 1.59e-38 141
Msa0424830 MtrunA17_Chr1g0167961 33.448 290 179 8 57 341 66 346 3.12e-38 140
Msa0424830 MtrunA17_Chr3g0126751 75.000 96 16 2 1 96 1 88 3.45e-38 133
Msa0424830 MtrunA17_Chr3g0130391 31.288 326 206 7 45 357 52 372 5.53e-38 140
Msa0424830 MtrunA17_Chr1g0158011 29.434 265 179 4 100 361 1 260 5.86e-38 137
Msa0424830 MtrunA17_Chr8g0351101 30.744 309 202 6 60 358 54 360 1.06e-37 139
Msa0424830 MtrunA17_Chr1g0148771 30.945 307 187 9 51 349 54 343 2.09e-37 138
Msa0424830 MtrunA17_Chr1g0191201 31.410 312 185 9 35 330 33 331 2.92e-37 138
Msa0424830 MtrunA17_Chr2g0313111 27.358 318 208 8 56 364 24 327 4.68e-37 136
Msa0424830 MtrunA17_Chr1g0161041 32.722 327 204 10 23 343 60 376 1.26e-36 136
Msa0424830 MtrunA17_Chr7g0239091 31.525 295 183 8 53 343 153 432 1.34e-36 137
Msa0424830 MtrunA17_Chr6g0488511 31.579 304 184 9 59 354 2 289 6.10e-36 132
Msa0424830 MtrunA17_Chr4g0053251 34.058 276 153 11 58 309 6 276 8.61e-36 132
Msa0424830 MtrunA17_Chr2g0285931 30.341 323 182 12 56 355 24 326 1.33e-35 132
Msa0424830 MtrunA17_Chr4g0045461 30.841 321 193 7 57 354 23 337 2.96e-35 132
Msa0424830 MtrunA17_Chr7g0235981 33.071 254 155 7 95 341 56 301 4.47e-35 131
Msa0424830 MtrunA17_Chr2g0314371 31.724 290 162 8 23 284 17 298 1.53e-34 129
Msa0424830 MtrunA17_Chr2g0319491 28.214 280 195 5 39 317 11 285 1.66e-34 129
Msa0424830 MtrunA17_Chr3g0125421 30.523 344 205 11 33 357 14 342 2.47e-34 129
Msa0424830 MtrunA17_Chr1g0167931 30.030 333 169 12 23 341 10 292 6.59e-33 125
Msa0424830 MtrunA17_Chr3g0092531 30.333 300 190 9 60 350 6 295 1.07e-32 124
Msa0424830 MtrunA17_Chr8g0358941 25.786 318 204 9 56 355 23 326 5.00e-32 123
Msa0424830 MtrunA17_Chr8g0362741 30.515 272 158 8 23 284 23 273 5.04e-32 122
Msa0424830 MtrunA17_Chr5g0420881 40.559 143 83 2 221 361 1 143 5.82e-32 117
Msa0424830 MtrunA17_Chr1g0170631 39.884 173 98 4 174 343 3 172 6.98e-32 119
Msa0424830 MtrunA17_Chr4g0068891 28.797 316 184 10 60 355 20 314 6.32e-31 119
Msa0424830 MtrunA17_Chr8g0384461 28.205 312 213 7 54 357 43 351 2.27e-30 119
Msa0424830 MtrunA17_Chr3g0105281 30.450 289 160 10 44 317 23 285 1.16e-29 116
Msa0424830 MtrunA17_Chr8g0384481 27.707 314 203 8 60 358 59 363 1.54e-29 117
Msa0424830 MtrunA17_Chr1g0194321 26.316 342 206 11 48 361 8 331 1.07e-28 114
Msa0424830 MtrunA17_Chr4g0064771 33.862 189 121 4 152 338 5 191 1.99e-28 110
Msa0424830 MtrunA17_Chr8g0348951 30.576 278 178 6 56 324 1 272 4.32e-28 112
Msa0424830 MtrunA17_Chr8g0389941 29.412 289 177 10 79 343 47 332 9.47e-28 111
Msa0424830 MtrunA17_Chr4g0052251 25.994 327 206 10 48 355 17 326 1.26e-27 110
Msa0424830 MtrunA17_Chr4g0075471 42.727 110 62 1 221 329 29 138 2.90e-27 105
Msa0424830 MtrunA17_Chr1g0158031 31.844 179 115 5 187 361 4 179 5.38e-27 105
Msa0424830 MtrunA17_Chr8g0336801 38.028 142 84 2 224 361 14 155 5.58e-27 104
Msa0424830 MtrunA17_Chr4g0055911 28.981 314 201 9 59 357 8 314 3.64e-26 106
Msa0424830 MtrunA17_Chr5g0407731 29.538 325 193 11 52 365 25 324 3.88e-26 107
Msa0424830 MtrunA17_Chr7g0247741 29.503 322 195 10 58 365 9 312 1.19e-25 105
Msa0424830 MtrunA17_Chr8g0336871 36.257 171 97 5 191 357 7 169 1.28e-25 101
Msa0424830 MtrunA17_Chr5g0394071 33.537 164 102 2 179 342 7 163 2.90e-25 100
Msa0424830 MtrunA17_Chr5g0407781 27.673 318 200 8 56 363 1 298 1.89e-24 101
Msa0424830 MtrunA17_Chr7g0233661 37.903 124 72 1 219 342 19 137 1.15e-22 93.2
Msa0424830 MtrunA17_Chr4g0055871 27.778 306 186 13 57 343 6 295 1.78e-22 96.3
Msa0424830 MtrunA17_Chr4g0037611 33.758 157 96 3 187 342 4 153 1.54e-21 90.9
Msa0424830 MtrunA17_Chr3g0138351 25.484 310 218 8 60 359 7 313 1.58e-21 94.0
Msa0424830 MtrunA17_Chr8g0364171 36.885 122 74 3 174 294 18 137 1.85e-21 89.4
Msa0424830 MtrunA17_Chr8g0336831 32.086 187 116 5 60 241 60 240 2.69e-21 92.0
Msa0424830 MtrunA17_Chr6g0486831 27.458 295 181 10 77 343 32 321 5.69e-21 92.8
Msa0424830 MtrunA17_Chr4g0009561 24.921 317 215 8 55 355 2 311 2.74e-20 90.5
Msa0424830 MtrunA17_Chr8g0375581 43.678 87 46 2 195 280 1 85 3.95e-20 84.0
Msa0424830 MtrunA17_Chr2g0293931 31.915 188 114 6 180 355 13 198 3.97e-20 87.8
Msa0424830 MtrunA17_Chr2g0319521 35.772 123 75 2 164 284 4 124 8.95e-20 84.7
Msa0424830 MtrunA17_Chr4g0004071 24.671 304 217 7 55 350 4 303 6.34e-18 83.6
Msa0424830 MtrunA17_Chr4g0009541 25.418 299 205 7 56 342 3 295 8.80e-18 83.2
Msa0424830 MtrunA17_Chr1g0167921 37.615 109 66 2 176 284 51 157 2.96e-17 78.6
Msa0424830 MtrunA17_Chr3g0092581 28.481 158 109 3 195 350 12 167 1.38e-16 77.0
Msa0424830 MtrunA17_Chr2g0311611 45.714 70 31 1 221 283 1 70 1.58e-16 73.6
Msa0424830 MtrunA17_Chr8g0375641 38.060 134 75 3 46 174 39 169 2.99e-16 76.3
Msa0424830 MtrunA17_Chr8g0375661 37.313 134 76 3 46 174 39 169 8.00e-16 74.7
Msa0424830 MtrunA17_Chr1g0161101 37.273 110 58 3 217 324 402 502 2.40e-15 77.4
Msa0424830 MtrunA17_Chr1g0170641 30.400 125 81 3 54 174 39 161 3.57e-15 72.8
Msa0424830 MtrunA17_Chr7g0235991 28.472 144 100 3 60 202 21 162 7.21e-15 72.4
Msa0424830 MtrunA17_Chr1g0148781 26.174 298 203 9 60 343 8 302 1.68e-14 73.6
Msa0424830 MtrunA17_Chr2g0311641 30.935 139 89 3 23 161 22 153 3.39e-14 70.1
Msa0424830 MtrunA17_Chr7g0219991 38.532 109 63 2 175 282 249 354 3.65e-14 72.8
Msa0424830 MtrunA17_Chr8g0336791 30.178 169 106 7 21 185 26 186 4.39e-13 67.4
Msa0424830 MtrunA17_Chr5g0420891 31.724 145 90 4 28 171 16 152 8.94e-12 63.2
Msa0424830 MtrunA17_Chr8g0375591 40.299 67 40 0 60 126 46 112 1.44e-11 61.6
Msa0424830 MtrunA17_Chr1g0184141 32.061 131 76 3 105 228 4 128 1.57e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424830 AT4G10500.1 36.937 333 197 6 35 361 20 345 6.40e-68 218
Msa0424830 AT4G10490.1 35.312 337 202 7 35 363 18 346 9.22e-67 215
Msa0424830 AT2G44800.1 36.741 313 186 7 58 364 50 356 1.75e-66 214
Msa0424830 AT3G60290.1 36.774 310 182 8 59 361 51 353 2.22e-65 211
Msa0424830 AT5G24530.1 35.777 341 200 9 31 358 2 336 5.86e-64 207
Msa0424830 AT2G36690.2 35.783 313 184 7 30 332 27 332 8.19e-64 207
Msa0424830 AT2G36690.1 35.783 313 184 7 30 332 27 332 8.19e-64 207
Msa0424830 AT4G22880.1 36.420 324 194 5 20 332 4 326 2.76e-63 206
Msa0424830 AT4G22880.2 36.420 324 194 5 20 332 4 326 2.76e-63 206
Msa0424830 AT4G22880.3 36.420 324 194 5 20 332 4 326 2.76e-63 206
Msa0424830 AT5G07480.1 35.238 315 186 9 60 361 44 353 7.22e-60 197
Msa0424830 AT1G55290.1 36.036 333 197 8 15 342 20 341 5.22e-59 195
Msa0424830 AT1G78550.1 33.908 348 213 9 22 361 17 355 1.99e-58 193
Msa0424830 AT1G17010.1 31.421 366 239 6 7 365 1 361 3.13e-58 193
Msa0424830 AT2G38240.1 33.628 339 208 9 20 349 9 339 4.19e-58 192
Msa0424830 AT5G08640.2 35.862 290 174 5 59 342 42 325 3.24e-56 187
Msa0424830 AT5G08640.1 35.862 290 174 5 59 342 42 325 3.24e-56 187
Msa0424830 AT3G13610.1 33.025 324 204 7 23 342 27 341 9.13e-56 187
Msa0424830 AT1G17020.1 33.432 338 197 9 20 342 14 338 2.15e-55 186
Msa0424830 AT3G11180.2 34.030 335 204 9 20 344 53 380 7.63e-54 183
Msa0424830 AT3G11180.1 34.030 335 204 9 20 344 53 380 7.81e-54 182
Msa0424830 AT1G06620.1 37.979 287 166 6 59 341 61 339 2.11e-52 178
Msa0424830 AT4G25300.1 32.578 353 217 9 20 361 13 355 2.99e-52 177
Msa0424830 AT5G59540.1 36.721 305 178 9 60 358 61 356 4.03e-52 177
Msa0424830 AT4G16330.2 34.076 314 186 7 57 362 64 364 1.52e-51 176
Msa0424830 AT5G20400.1 34.202 307 189 9 60 357 45 347 2.15e-51 175
Msa0424830 AT5G63590.1 34.812 293 178 5 57 342 11 297 2.40e-51 174
Msa0424830 AT3G21420.1 35.556 315 190 7 53 358 48 358 3.09e-51 175
Msa0424830 AT3G12900.1 34.859 284 177 6 63 343 59 337 6.61e-51 174
Msa0424830 AT5G05600.1 32.635 334 210 8 20 344 24 351 8.27e-51 174
Msa0424830 AT5G63600.1 35.333 300 174 7 57 350 30 315 1.43e-50 172
Msa0424830 AT5G54000.2 33.333 309 189 9 60 357 46 348 7.26e-50 171
Msa0424830 AT5G59530.1 35.669 314 185 11 35 341 35 338 1.91e-49 170
Msa0424830 AT5G63600.2 35.216 301 174 8 57 350 30 316 5.07e-49 168
Msa0424830 AT1G03400.1 36.264 273 162 6 79 346 66 331 1.22e-48 167
Msa0424830 AT4G25310.1 34.483 290 175 7 80 361 70 352 1.50e-48 167
Msa0424830 AT3G51240.1 32.588 313 188 9 60 355 38 344 1.80e-48 167
Msa0424830 AT1G04380.1 34.277 318 193 8 45 358 30 335 2.35e-48 167
Msa0424830 AT1G78550.2 34.173 278 170 6 92 361 5 277 4.19e-48 164
Msa0424830 AT3G19010.1 32.154 311 182 9 60 349 28 330 8.00e-48 166
Msa0424830 AT3G19010.4 32.154 311 182 9 60 349 28 330 8.00e-48 166
Msa0424830 AT5G43440.1 35.932 295 167 10 56 341 58 339 9.28e-48 166
Msa0424830 AT1G77330.1 34.000 300 179 8 59 347 2 293 1.98e-47 163
Msa0424830 AT1G03410.1 33.148 359 203 13 11 346 34 378 5.35e-47 164
Msa0424830 AT3G55970.1 30.792 341 220 9 23 350 14 351 6.62e-47 163
Msa0424830 AT1G03410.2 32.857 350 207 12 10 346 7 341 7.47e-47 163
Msa0424830 AT1G80330.1 32.597 362 211 13 14 361 7 349 6.94e-46 160
Msa0424830 AT3G19000.1 30.794 315 190 8 56 349 28 335 1.60e-45 159
Msa0424830 AT1G06620.2 39.648 227 132 4 59 284 61 283 1.01e-44 155
Msa0424830 AT1G04350.1 35.172 290 176 7 59 342 57 340 1.03e-44 157
Msa0424830 AT2G30830.1 33.333 288 177 8 60 341 54 332 2.31e-44 157
Msa0424830 AT5G54000.1 32.963 270 169 7 97 357 2 268 2.63e-44 154
Msa0424830 AT1G49390.1 33.010 309 190 10 60 357 45 347 2.70e-44 156
Msa0424830 AT5G43450.1 33.227 313 186 9 35 341 41 336 3.15e-44 156
Msa0424830 AT5G07480.2 35.950 242 139 7 133 361 6 244 6.88e-44 152
Msa0424830 AT5G20550.1 32.915 319 189 11 35 338 19 327 7.42e-44 155
Msa0424830 AT1G06650.2 31.395 344 206 12 21 342 14 349 1.29e-43 155
Msa0424830 AT1G15550.1 32.667 300 170 9 59 343 56 338 3.17e-43 154
Msa0424830 AT1G06640.1 31.356 354 215 11 11 342 2 349 5.52e-43 153
Msa0424830 AT1G03400.2 32.890 301 162 7 79 346 66 359 6.56e-43 153
Msa0424830 AT1G12010.1 30.303 297 185 8 55 343 2 284 8.42e-43 151
Msa0424830 AT5G43935.1 32.550 298 160 8 56 342 15 282 2.36e-42 149
Msa0424830 AT1G06645.1 31.686 344 202 10 21 342 27 359 3.10e-42 151
Msa0424830 AT4G16330.1 34.510 255 155 4 115 362 9 258 4.76e-42 148
Msa0424830 AT1G80340.1 31.481 324 193 9 36 343 21 331 1.06e-41 149
Msa0424830 AT3G61400.1 29.640 361 218 13 1 341 1 345 1.92e-41 149
Msa0424830 AT2G30840.1 31.503 346 210 11 21 349 9 344 2.12e-41 149
Msa0424830 AT5G59540.2 38.596 228 133 6 60 284 61 284 2.69e-41 147
Msa0424830 AT1G62380.1 30.272 294 189 8 55 343 2 284 4.05e-41 147
Msa0424830 AT3G19010.3 30.897 301 169 8 60 349 28 300 1.65e-40 145
Msa0424830 AT4G25420.1 33.043 345 203 11 1 327 1 335 1.99e-40 147
Msa0424830 AT5G43440.2 36.287 237 136 7 56 286 58 285 2.50e-40 144
Msa0424830 AT5G63595.1 33.808 281 137 7 57 324 22 266 4.55e-40 143
Msa0424830 AT2G19590.1 33.013 312 180 9 52 354 3 294 1.02e-39 143
Msa0424830 AT5G12270.1 30.303 330 211 8 23 343 21 340 1.21e-39 144
Msa0424830 AT5G05600.2 32.601 273 170 7 20 284 24 290 3.84e-39 141
Msa0424830 AT5G07200.1 31.677 322 188 8 60 359 58 369 8.49e-39 142
Msa0424830 AT3G51240.2 35.841 226 126 7 108 322 1 218 8.81e-39 139
Msa0424830 AT5G43450.2 33.462 260 143 8 35 284 41 280 2.75e-38 139
Msa0424830 AT1G04380.2 34.979 243 150 5 45 286 30 265 3.20e-38 138
Msa0424830 AT2G30840.3 31.503 346 204 12 21 349 9 338 3.56e-38 140
Msa0424830 AT1G49390.2 31.852 270 172 8 97 357 2 268 3.87e-38 138
Msa0424830 AT1G05010.1 31.985 272 175 6 59 327 3 267 4.08e-38 139
Msa0424830 AT5G51810.1 31.024 332 184 11 50 358 56 365 1.59e-37 139
Msa0424830 AT3G19010.2 32.927 246 137 8 60 285 28 265 2.70e-37 136
Msa0424830 AT2G25450.1 32.302 291 177 10 60 341 55 334 4.41e-37 137
Msa0424830 AT3G19000.2 31.518 257 149 7 56 292 28 277 4.45e-37 135
Msa0424830 AT1G30040.1 30.351 313 185 10 59 355 30 325 9.25e-37 136
Msa0424830 AT1G60980.1 32.979 282 170 5 60 326 57 334 9.77e-37 137
Msa0424830 AT1G06650.1 32.258 279 166 8 21 283 14 285 1.15e-36 135
Msa0424830 AT1G06640.2 31.757 296 181 8 11 290 2 292 2.19e-36 134
Msa0424830 AT1G78440.1 30.032 313 187 11 60 355 18 315 4.60e-36 134
Msa0424830 AT2G30840.2 31.884 276 168 8 23 284 11 280 8.92e-36 132
Msa0424830 AT4G21200.1 26.380 326 192 7 39 342 14 313 1.86e-35 132
Msa0424830 AT1G44090.1 31.148 305 178 7 60 346 63 353 4.15e-35 132
Msa0424830 AT3G55970.2 29.670 273 179 7 23 285 14 283 4.34e-35 130
Msa0424830 AT1G06640.3 31.818 286 174 8 11 280 2 282 5.70e-35 130
Msa0424830 AT5G63580.1 34.322 236 138 5 56 284 15 240 2.49e-34 127
Msa0424830 AT4G21690.1 28.994 338 198 12 30 343 14 333 3.59e-34 129
Msa0424830 AT5G63580.2 34.188 234 137 5 56 282 15 238 4.87e-34 126
Msa0424830 AT4G25310.2 29.758 289 162 7 80 361 70 324 2.04e-33 127
Msa0424830 AT1G50960.1 29.097 299 197 5 28 320 8 297 2.09e-33 127
Msa0424830 AT3G61400.2 28.000 300 188 10 1 284 1 288 6.88e-33 124
Msa0424830 AT3G50210.4 33.808 281 149 12 59 308 7 281 3.29e-32 124
Msa0424830 AT3G50210.1 33.808 281 149 12 59 308 7 281 3.29e-32 124
Msa0424830 AT3G50210.3 33.808 281 149 12 59 308 7 281 3.29e-32 124
Msa0424830 AT4G25300.2 35.417 192 119 4 173 361 72 261 6.01e-32 121
Msa0424830 AT1G47990.1 28.746 327 184 11 60 361 15 317 2.53e-31 121
Msa0424830 AT4G23340.1 31.633 294 175 11 86 365 30 311 2.86e-31 121
Msa0424830 AT2G34555.1 28.939 311 189 11 60 355 27 320 4.03e-30 118
Msa0424830 AT3G49620.1 30.142 282 171 9 50 308 24 302 5.28e-30 118
Msa0424830 AT3G49630.1 31.250 272 161 9 60 308 9 277 2.26e-28 113
Msa0424830 AT2G19590.2 31.365 271 160 8 93 354 26 279 5.02e-28 111
Msa0424830 AT5G58660.1 28.417 278 151 6 59 304 33 294 3.00e-27 110
Msa0424830 AT3G49630.3 31.452 248 151 7 77 308 29 273 9.48e-27 108
Msa0424830 AT4G25420.2 30.872 298 178 11 1 280 1 288 3.05e-26 107
Msa0424830 AT3G47190.1 28.315 279 160 7 60 317 32 291 3.13e-26 107
Msa0424830 AT1G02400.1 28.165 316 192 11 59 355 23 322 3.13e-25 104
Msa0424830 AT5G51810.2 29.297 256 145 8 50 287 56 293 2.14e-24 101
Msa0424830 AT1G14130.1 27.414 321 193 11 60 364 9 305 4.25e-24 101
Msa0424830 AT1G14120.2 31.293 294 172 13 55 337 3 277 9.58e-24 100
Msa0424830 AT1G14120.1 31.293 294 172 13 55 337 3 277 9.58e-24 100
Msa0424830 AT1G14120.3 31.293 294 172 13 55 337 3 277 9.58e-24 100
Msa0424830 AT3G46490.1 26.791 321 208 10 53 349 5 322 5.86e-23 98.6
Msa0424830 AT3G46490.2 28.727 275 169 7 53 303 5 276 1.35e-22 97.1
Msa0424830 AT5G51310.1 27.358 318 188 11 56 347 1 301 1.04e-21 94.7
Msa0424830 AT1G30040.2 29.876 241 137 9 59 284 30 253 2.07e-21 92.8
Msa0424830 AT5G58660.2 27.237 257 139 6 59 283 33 273 2.82e-21 92.8
Msa0424830 AT4G23340.2 32.308 195 120 7 179 365 3 193 4.99e-20 87.8
Msa0424830 AT1G35190.1 27.157 313 192 10 57 343 9 311 3.30e-19 87.8
Msa0424830 AT3G50210.2 35.542 166 95 6 152 309 39 200 7.89e-19 85.5
Msa0424830 AT1G35190.2 27.302 315 166 13 57 343 9 288 3.03e-18 84.7
Msa0424830 AT1G52820.1 27.365 296 200 8 56 343 8 296 3.14e-18 84.7
Msa0424830 AT4G22870.1 44.444 81 44 1 253 332 2 82 1.09e-17 78.6
Msa0424830 AT3G49630.2 36.552 145 88 4 166 308 62 204 3.14e-17 80.9
Msa0424830 AT4G22870.2 42.857 84 44 2 253 332 40 123 1.20e-15 73.9
Msa0424830 AT4G03070.1 26.752 314 202 11 56 352 10 312 1.87e-15 77.0
Msa0424830 AT1G52800.1 25.969 258 174 8 60 308 10 259 1.54e-14 73.9
Msa0424830 AT4G16770.1 28.169 213 136 6 57 258 19 225 3.95e-14 72.0
Msa0424830 AT2G06960.1 37.931 87 48 2 191 277 1 81 7.77e-14 68.9
Msa0424830 AT4G03050.2 38.053 113 67 3 234 343 274 386 8.62e-14 72.4
Msa0424830 AT4G03050.1 38.053 113 67 3 234 343 274 386 8.62e-14 72.4
Msa0424830 AT1G02400.2 26.939 245 146 9 59 286 23 251 9.34e-14 71.2
Msa0424830 AT4G16765.6 28.947 190 124 5 171 352 57 243 1.99e-13 69.7
Msa0424830 AT4G16765.1 28.947 190 124 5 171 352 57 243 1.99e-13 69.7
Msa0424830 AT4G16765.2 28.947 190 124 5 171 352 57 243 1.99e-13 69.7
Msa0424830 AT4G16765.3 30.573 157 101 3 171 320 57 212 2.93e-13 69.3
Msa0424830 AT3G46480.1 27.189 217 142 6 109 317 34 242 1.01e-11 65.5
Msa0424830 AT1G80320.1 24.335 263 174 8 60 308 9 260 2.61e-11 64.3

Find 104 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACCTTCCTTATACAAAA+TGG 0.228236 3_2:-75107351 Msa0424830:CDS
AAGTTAAACATGAGGGTAAA+TGG 0.242743 3_2:-75107314 Msa0424830:CDS
TTCTGTGAGGGAGTGGTAAT+TGG 0.299824 3_2:+75110025 None:intergenic
ATATGGTTGATGTTAATTAA+TGG 0.329593 3_2:-75106714 Msa0424830:three_prime_UTR
TTCCTTATACAAAATGGAAT+TGG 0.330250 3_2:-75107345 Msa0424830:CDS
TTCTGAATGGGGTTTCTTCA+TGG 0.334563 3_2:-75109874 Msa0424830:intron
CTCACAAACCACCAGGTTAC+AGG 0.348722 3_2:-75108820 Msa0424830:intron
AGATGACTCAATTATAGAAT+TGG 0.362656 3_2:+75107476 None:intergenic
CGGAATTCCTGAGAGTCTTA+TGG 0.377411 3_2:-75109026 Msa0424830:CDS
GTTTGTGAGGGAAATTGAAT+TGG 0.381128 3_2:+75108834 None:intergenic
TTTCTTTCTGTAATAGTTCA+GGG 0.390100 3_2:+75106912 None:intergenic
TTTGTGAGGGAAATTGAATT+GGG 0.392086 3_2:+75108835 None:intergenic
TGCCAAGGCATGTTCTGAAT+GGG 0.395223 3_2:-75109886 Msa0424830:CDS
AATTCTATAATTGAGTCATC+TGG 0.405446 3_2:-75107474 Msa0424830:CDS
TGACTCTGGCTTACAAATCA+TGG 0.407059 3_2:-75107448 Msa0424830:CDS
GATTGCAATCATGTAGGATT+AGG 0.407606 3_2:+75110213 None:intergenic
TATTGAATATTGATGTAGTT+AGG 0.410927 3_2:+75110186 None:intergenic
GTGGAGGAAAAGAAGGAGTT+TGG 0.415340 3_2:-75108962 Msa0424830:CDS
ATTGTCAGATGAAAGGGCTT+TGG 0.417168 3_2:-75106831 Msa0424830:CDS
TTCTAGTATCCTTGTTGTTG+AGG 0.420071 3_2:+75106987 None:intergenic
TCACGAGTTTCATGATTTGC+CGG 0.420758 3_2:-75108984 Msa0424830:CDS
TTGCCTGCTCATTCTGATGT+TGG 0.430270 3_2:-75107378 Msa0424830:CDS
GTCACGATTGTCAGATGAAA+GGG 0.433173 3_2:-75106837 Msa0424830:CDS
AAAGGGCTTTGGACCAGGTT+CGG 0.439412 3_2:-75106820 Msa0424830:CDS
TTCATGCATCAAAGCCTTTG+CGG 0.439432 3_2:-75110075 Msa0424830:CDS
CTTATACAAAATGGAATTGG+AGG 0.454598 3_2:-75107342 Msa0424830:CDS
ACAACTAAGCAGTTGGGAAT+GGG 0.456540 3_2:+75107279 None:intergenic
TTCTGTAATAGTTCAGGGGC+AGG 0.461072 3_2:+75106917 None:intergenic
AGTTAAACATGAGGGTAAAT+GGG 0.461770 3_2:-75107313 Msa0424830:CDS
AACTCCTCCATAAGACTCTC+AGG 0.461775 3_2:+75109019 None:intergenic
TTGGTTAGGCTGTGAGTAAC+GGG 0.462719 3_2:-75107039 Msa0424830:intron
AAAGCCTTTGCGGAATCAAA+TGG 0.463467 3_2:-75110065 Msa0424830:CDS
TTGCCAAGGCATGTTCTGAA+TGG 0.467970 3_2:-75109887 Msa0424830:CDS
CCACAACCACACCTTGCTCT+AGG 0.476880 3_2:-75107402 Msa0424830:CDS
CAAGGAATATCCGAGAGCTT+AGG 0.479098 3_2:-75107507 Msa0424830:CDS
GACAACTAAGCAGTTGGGAA+TGG 0.485868 3_2:+75107278 None:intergenic
GTTTCATGATTTGCCGGTGG+AGG 0.490548 3_2:-75108978 Msa0424830:CDS
ATAAGTCTTGTAGTGGTGAA+TGG 0.497425 3_2:-75106965 Msa0424830:CDS
GTGAGCCTTTCTCACCCATC+AGG 0.497508 3_2:-75108931 Msa0424830:CDS
CCATGGATGTATCTTTGAGT+TGG 0.499592 3_2:+75110153 None:intergenic
AGGAGAGAGAAATCAATGAC+TGG 0.506214 3_2:+75109954 None:intergenic
AGATGAAAGGGCTTTGGACC+AGG 0.507031 3_2:-75106825 Msa0424830:CDS
ACATCAATAATATTATCATC+AGG 0.521046 3_2:+75110002 None:intergenic
CCTGCAGAAGATAGAGATGT+TGG 0.522228 3_2:-75106941 Msa0424830:CDS
GCAAGGTGTGGTTGTGGACA+TGG 0.524776 3_2:+75107408 None:intergenic
CCAACATCTCTATCTTCTGC+AGG 0.526331 3_2:+75106941 None:intergenic
CACAACCACACCTTGCTCTA+GGG 0.528331 3_2:-75107401 Msa0424830:CDS
ACCCCATTCAGAACATGCCT+TGG 0.533966 3_2:+75109884 None:intergenic
AATGTTGACAACTAAGCAGT+TGG 0.534203 3_2:+75107272 None:intergenic
CCTAGAGCAAGGTGTGGTTG+TGG 0.536111 3_2:+75107402 None:intergenic
AACTGCTTAGTTGTCAACAT+TGG 0.539808 3_2:-75107270 Msa0424830:CDS
AAGAAGGAGTTTGGTGACAA+TGG 0.540669 3_2:-75108953 Msa0424830:CDS
GTGGCAAGGAAATTGATTCA+AGG 0.543648 3_2:-75107525 Msa0424830:CDS
GAAGCTAGTGCCATGCCTGA+TGG 0.544410 3_2:+75108916 None:intergenic
AGAGAAATCAATGACTGGGA+TGG 0.545007 3_2:+75109959 None:intergenic
GGAAGTGATTGCAATCATGT+AGG 0.547114 3_2:+75110207 None:intergenic
AACTGTTCATAAACTTGCCA+AGG 0.549347 3_2:-75109901 Msa0424830:CDS
TTCTTTCTGTAATAGTTCAG+GGG 0.553250 3_2:+75106913 None:intergenic
CATCAGGTTCTGTGAGGGAG+TGG 0.554209 3_2:+75110018 None:intergenic
CCATGCCTGATGGGTGAGAA+AGG 0.556931 3_2:+75108926 None:intergenic
CTGTAACCTGGTGGTTTGTG+AGG 0.566033 3_2:+75108821 None:intergenic
ATGTTGACAACTAAGCAGTT+GGG 0.568577 3_2:+75107273 None:intergenic
GTGAGGGAGTGGTAATTGGA+AGG 0.569707 3_2:+75110029 None:intergenic
AAGCCAACATCAGAATGAGC+AGG 0.569982 3_2:+75107375 None:intergenic
ATTGGTTAGGCTGTGAGTAA+CGG 0.572307 3_2:-75107040 Msa0424830:intron
GCCAAGGCATGTTCTGAATG+GGG 0.575041 3_2:-75109885 Msa0424830:CDS
GTACACTCTCTGATGGAGGA+TGG 0.575682 3_2:+75108894 None:intergenic
GTAATTGGAAGGAATGAGAG+AGG 0.579683 3_2:+75110040 None:intergenic
GGATTCTAATCCTAAGCTCT+CGG 0.580227 3_2:+75107497 None:intergenic
TTTGCCGGTGGAGGAAAAGA+AGG 0.581034 3_2:-75108969 Msa0424830:CDS
AGTCACGATTGTCAGATGAA+AGG 0.583621 3_2:-75106838 Msa0424830:CDS
CGAGTTTCATGATTTGCCGG+TGG 0.584918 3_2:-75108981 Msa0424830:CDS
CCTTTCTCACCCATCAGGCA+TGG 0.586008 3_2:-75108926 Msa0424830:CDS
AAGCTAGTGCCATGCCTGAT+GGG 0.586542 3_2:+75108917 None:intergenic
TTGTGAGGGAAATTGAATTG+GGG 0.588809 3_2:+75108836 None:intergenic
ATGGTCTTGTCTAGTTCTAG+AGG 0.589661 3_2:-75106769 Msa0424830:three_prime_UTR
AATTTCCCTCACAAACCACC+AGG 0.608315 3_2:-75108827 Msa0424830:CDS
TACTAGAATAAGTCTTGTAG+TGG 0.611192 3_2:-75106972 Msa0424830:CDS
ATTATCATCAGGTTCTGTGA+GGG 0.613628 3_2:+75110013 None:intergenic
GGTTCCATTTGATTCCGCAA+AGG 0.614264 3_2:+75110061 None:intergenic
AATTGTAGTTGCTGAAGCCA+TGG 0.617132 3_2:+75110136 None:intergenic
CTTAATTACCTGTAACCTGG+TGG 0.617899 3_2:+75108812 None:intergenic
GAACTTAATTACCTGTAACC+TGG 0.624723 3_2:+75108809 None:intergenic
GGAGAGAGAAATCAATGACT+GGG 0.628398 3_2:+75109955 None:intergenic
GGTCTTCAAGTTAAACATGA+GGG 0.631580 3_2:-75107321 Msa0424830:CDS
CCAACTCAAAGATACATCCA+TGG 0.632282 3_2:-75110153 Msa0424830:exon
AGGTCTTCAAGTTAAACATG+AGG 0.634626 3_2:-75107322 Msa0424830:CDS
AAATGTACACTCTCTGATGG+AGG 0.638346 3_2:+75108890 None:intergenic
GAGCAGGCAACCCTAGAGCA+AGG 0.643541 3_2:+75107391 None:intergenic
TGTAACCTGGTGGTTTGTGA+GGG 0.645056 3_2:+75108822 None:intergenic
AATGTTCAGCTCACAAACCA+CGG 0.647560 3_2:-75109046 Msa0424830:intron
TTTGAGGGTCATCTGAGGTG+AGG 0.649313 3_2:+75109934 None:intergenic
CAACATTGGAGATCAACTTG+AGG 0.650928 3_2:-75107256 Msa0424830:intron
TAAGACTCTCAGGAATTCCG+TGG 0.651878 3_2:+75109029 None:intergenic
GTGGATTTGAGGGTCATCTG+AGG 0.655247 3_2:+75109929 None:intergenic
TCGAGCAATCCTCAACAACA+AGG 0.664244 3_2:-75106996 Msa0424830:CDS
TAATATTATTGATGTTACAG+AGG 0.665882 3_2:-75109994 Msa0424830:CDS
AGGTGTGGTTGTGGACATGG+AGG 0.667422 3_2:+75107411 None:intergenic
TATTATCATCAGGTTCTGTG+AGG 0.676843 3_2:+75110012 None:intergenic
AATTCCTGAGAGTCTTATGG+AGG 0.684684 3_2:-75109023 Msa0424830:CDS
GGCAACCCTAGAGCAAGGTG+TGG 0.686730 3_2:+75107396 None:intergenic
CTACAATTACATCATCAGAA+CGG 0.701056 3_2:-75110121 Msa0424830:CDS
GTTAGGCTGTGAGTAACGGG+AGG 0.710883 3_2:-75107036 Msa0424830:intron
GGTGTGGTTGTGGACATGGA+GGG 0.714519 3_2:+75107412 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTATAAAAAT+TGG - chr3_2:75107097-75107116 Msa0424830:intron 0.0%
!! AAAATATATATTTATATTAA+GGG + chr3_2:75107295-75107314 None:intergenic 0.0%
!! AAAAATATATATTTATATTA+AGG + chr3_2:75107296-75107315 None:intergenic 0.0%
!!! TTATTTTATAAAAATTGGAA+AGG - chr3_2:75107102-75107121 Msa0424830:intron 10.0%
!!! TTTGTTGTTAAATTAATATA+AGG - chr3_2:75107254-75107273 Msa0424830:intron 10.0%
!!! TATAAATATATATTTTTGAC+TGG - chr3_2:75107299-75107318 Msa0424830:CDS 10.0%
!!! TTCTATATTATAATTTTGTA+TGG - chr3_2:75107561-75107580 Msa0424830:CDS 10.0%
!! AACCTTATTATTATTAATAA+CGG - chr3_2:75107673-75107692 Msa0424830:intron 10.0%
!!! TTTTAAAAAAAAAAGTCAAT+TGG + chr3_2:75108310-75108329 None:intergenic 10.0%
!! TCTTTCAAAAAAAAAAAAAA+AGG + chr3_2:75108865-75108884 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTGAAAGA+TGG - chr3_2:75108865-75108884 Msa0424830:CDS 10.0%
!! ATTATCAAAGTTTAAAAATA+TGG - chr3_2:75110147-75110166 Msa0424830:exon 10.0%
!!! TAGCTCAAAATTTAATTTTT+AGG - chr3_2:75107368-75107387 Msa0424830:CDS 15.0%
!!! ATAATTTTGTATGGATTAAA+CGG - chr3_2:75107570-75107589 Msa0424830:intron 15.0%
!!! TCTTTTCTTTATTTTTTGAA+GGG + chr3_2:75108154-75108173 None:intergenic 15.0%
!!! TTCTTTTCTTTATTTTTTGA+AGG + chr3_2:75108155-75108174 None:intergenic 15.0%
!!! TATTTTCTTATATATAAGAC+CGG - chr3_2:75108812-75108831 Msa0424830:intron 15.0%
!!! AATTTTGAAATTTTTTTGCT+TGG - chr3_2:75109199-75109218 Msa0424830:intron 15.0%
!!! ATTTTGAAATTTTTTTGCTT+GGG - chr3_2:75109200-75109219 Msa0424830:intron 15.0%
!!! ATTTTTTTTTTGGAAAAAGA+GGG + chr3_2:75109233-75109252 None:intergenic 15.0%
!!! AAAATGACTGATTTTTTTTT+TGG + chr3_2:75109243-75109262 None:intergenic 15.0%
!! TATTGAATATTGATGTAGTT+AGG + chr3_2:75106708-75106727 None:intergenic 20.0%
!! ACATCAATAATATTATCATC+AGG + chr3_2:75106892-75106911 None:intergenic 20.0%
!! TAATATTATTGATGTTACAG+AGG - chr3_2:75106897-75106916 Msa0424830:CDS 20.0%
!!! ATATGAAGGATAATTTTGTA+TGG + chr3_2:75107224-75107243 None:intergenic 20.0%
!!! GTTAACATTTTATTTCAACA+AGG - chr3_2:75107529-75107548 Msa0424830:CDS 20.0%
!!! CAACAAATTTGTTTTATTGT+CGG + chr3_2:75107609-75107628 None:intergenic 20.0%
!! TAAGGTTATGTAAAAAATGA+GGG + chr3_2:75107660-75107679 None:intergenic 20.0%
!! ATAAGGTTATGTAAAAAATG+AGG + chr3_2:75107661-75107680 None:intergenic 20.0%
!! CACCGTTATTAATAATAATA+AGG + chr3_2:75107678-75107697 None:intergenic 20.0%
!! GTACTTATAATGATTAATAG+TGG + chr3_2:75108432-75108451 None:intergenic 20.0%
!!! CCAATCACTAATATTTTTTA+GGG + chr3_2:75108473-75108492 None:intergenic 20.0%
!! CCTAAAAAATATTAGTGATT+GGG - chr3_2:75108471-75108490 Msa0424830:intron 20.0%
!! ATTAATGTAATACTACTTCA+CGG + chr3_2:75108762-75108781 None:intergenic 20.0%
!! TGACTTCAACATTTATTTAT+AGG - chr3_2:75108966-75108985 Msa0424830:CDS 20.0%
!! GACTTCAACATTTATTTATA+GGG - chr3_2:75108967-75108986 Msa0424830:CDS 20.0%
!! ATAGAAATACACATATCAAA+AGG + chr3_2:75109095-75109114 None:intergenic 20.0%
!!! TTTTGAAATTTTTTTGCTTG+GGG - chr3_2:75109201-75109220 Msa0424830:intron 20.0%
!!! GATTTTTTTTTTGGAAAAAG+AGG + chr3_2:75109234-75109253 None:intergenic 20.0%
!!! CATGTGTTCTTTTTATTAAT+TGG - chr3_2:75109291-75109310 Msa0424830:intron 20.0%
!! TAAAATGAGTTAATCACAAT+TGG + chr3_2:75109805-75109824 None:intergenic 20.0%
!! AAAAAATGACATGTATGATA+TGG - chr3_2:75110103-75110122 Msa0424830:CDS 20.0%
!! AAAAATATGGATGTTGAATA+TGG - chr3_2:75110160-75110179 Msa0424830:five_prime_UTR 20.0%
!!! ATATGGTTGATGTTAATTAA+TGG - chr3_2:75110177-75110196 Msa0424830:five_prime_UTR 20.0%
! TATCATTTGAGAAAACTACT+AGG + chr3_2:75107059-75107078 None:intergenic 25.0%
! ATTATGGTTAAACATGTCTT+TGG - chr3_2:75107141-75107160 Msa0424830:intron 25.0%
!! TTTGTATGGATTATAAAGTG+CGG + chr3_2:75107210-75107229 None:intergenic 25.0%
! CAAAAGCTAATACTATATGA+AGG + chr3_2:75107238-75107257 None:intergenic 25.0%
! CAAAGTTCTTCGTAAAAATT+TGG + chr3_2:75107468-75107487 None:intergenic 25.0%
! GATATTAATGCCAACTAATA+TGG - chr3_2:75107816-75107835 Msa0424830:intron 25.0%
!! AGACCTTTAAAAAGTGTATT+GGG + chr3_2:75108234-75108253 None:intergenic 25.0%
!! TAGACCTTTAAAAAGTGTAT+TGG + chr3_2:75108235-75108254 None:intergenic 25.0%
!!! CACTTTTTAAAGGTCTAAAA+TGG - chr3_2:75108238-75108257 Msa0424830:intron 25.0%
! AACATCATAGACAATAGATA+GGG + chr3_2:75108363-75108382 None:intergenic 25.0%
! AAACATCATAGACAATAGAT+AGG + chr3_2:75108364-75108383 None:intergenic 25.0%
! TCTATTGTCTATGATGTTTA+CGG - chr3_2:75108365-75108384 Msa0424830:intron 25.0%
! AGTGGTAGAATTTATTAATG+CGG + chr3_2:75108414-75108433 None:intergenic 25.0%
! CCCTAAAAAATATTAGTGAT+TGG - chr3_2:75108470-75108489 Msa0424830:intron 25.0%
!!! CCCAATCACTAATATTTTTT+AGG + chr3_2:75108474-75108493 None:intergenic 25.0%
!!! TGGATAGTTACTAGTTTTAT+CGG + chr3_2:75108906-75108925 None:intergenic 25.0%
! ATGCAAAATTGCTCTATTTA+GGG + chr3_2:75109030-75109049 None:intergenic 25.0%
! AATGCAAAATTGCTCTATTT+AGG + chr3_2:75109031-75109050 None:intergenic 25.0%
!! TAAATAGAGCAATTTTGCAT+TGG - chr3_2:75109030-75109049 Msa0424830:CDS 25.0%
! AGATGACTCAATTATAGAAT+TGG + chr3_2:75109418-75109437 None:intergenic 25.0%
! AATTCTATAATTGAGTCATC+TGG - chr3_2:75109417-75109436 Msa0424830:intron 25.0%
!! AATTCCATTTTGTATAAGGA+AGG + chr3_2:75109547-75109566 None:intergenic 25.0%
! TTCCTTATACAAAATGGAAT+TGG - chr3_2:75109546-75109565 Msa0424830:intron 25.0%
! TTTCTTTCTGTAATAGTTCA+GGG + chr3_2:75109982-75110001 None:intergenic 25.0%
!! TTTTCTTTCTGTAATAGTTC+AGG + chr3_2:75109983-75110002 None:intergenic 25.0%
!! TACTTGATACTTTTGAACAA+TGG + chr3_2:75110007-75110026 None:intergenic 25.0%
CTACAATTACATCATCAGAA+CGG - chr3_2:75106770-75106789 Msa0424830:three_prime_UTR 30.0%
! GTTTATGAACAGTTTTTGTG+TGG + chr3_2:75106984-75107003 None:intergenic 30.0%
!!! TATAAAGTGCGGCTTTTTTA+GGG + chr3_2:75107199-75107218 None:intergenic 30.0%
!!! TTATAAAGTGCGGCTTTTTT+AGG + chr3_2:75107200-75107219 None:intergenic 30.0%
TTTGTGAGGGAAATTGAATT+GGG + chr3_2:75108059-75108078 None:intergenic 30.0%
ACATCTCTATTTCATTGTCT+TGG + chr3_2:75108200-75108219 None:intergenic 30.0%
!! AACCCCAATACACTTTTTAA+AGG - chr3_2:75108228-75108247 Msa0424830:intron 30.0%
! GACCTTTAAAAAGTGTATTG+GGG + chr3_2:75108233-75108252 None:intergenic 30.0%
ATTTATTAATGCGGGTCTAA+TGG + chr3_2:75108405-75108424 None:intergenic 30.0%
GTGGTAGAATTTATTAATGC+GGG + chr3_2:75108413-75108432 None:intergenic 30.0%
! ATTTAAAGTACGTTCAACAC+CGG + chr3_2:75108734-75108753 None:intergenic 30.0%
GTTGAACGTACTTTAAATGT+AGG - chr3_2:75108736-75108755 Msa0424830:intron 30.0%
TTCTTATATATAAGACCGGA+AGG - chr3_2:75108816-75108835 Msa0424830:intron 30.0%
TCCACATTAAATATTCCTTC+CGG + chr3_2:75108834-75108853 None:intergenic 30.0%
!!! GTTACTAGTTTTATCGGATA+GGG + chr3_2:75108900-75108919 None:intergenic 30.0%
!!! AGTTACTAGTTTTATCGGAT+AGG + chr3_2:75108901-75108920 None:intergenic 30.0%
!! CATTAGTGGTGCTTTTAAAA+TGG + chr3_2:75108945-75108964 None:intergenic 30.0%
AATGTTGAAGTCAACATTAG+TGG + chr3_2:75108959-75108978 None:intergenic 30.0%
!! GTATTGGTGCTATATCAATA+AGG + chr3_2:75109163-75109182 None:intergenic 30.0%
CGTCTCTGATTTAATTGTAT+TGG + chr3_2:75109179-75109198 None:intergenic 30.0%
TTGACCTTCCTTATACAAAA+TGG - chr3_2:75109540-75109559 Msa0424830:intron 30.0%
! CTCCAATTCCATTTTGTATA+AGG + chr3_2:75109551-75109570 None:intergenic 30.0%
CTTATACAAAATGGAATTGG+AGG - chr3_2:75109549-75109568 Msa0424830:intron 30.0%
AAGTTAAACATGAGGGTAAA+TGG - chr3_2:75109577-75109596 Msa0424830:intron 30.0%
AGTTAAACATGAGGGTAAAT+GGG - chr3_2:75109578-75109597 Msa0424830:intron 30.0%
GAGTTAATCACAATTGGTAA+TGG + chr3_2:75109799-75109818 None:intergenic 30.0%
TTAACGTATATCCTCTGTAT+TGG - chr3_2:75109833-75109852 Msa0424830:intron 30.0%
! TACTAGAATAAGTCTTGTAG+TGG - chr3_2:75109919-75109938 Msa0424830:CDS 30.0%
TTCTTTCTGTAATAGTTCAG+GGG + chr3_2:75109981-75110000 None:intergenic 30.0%
GATTGCAATCATGTAGGATT+AGG + chr3_2:75106681-75106700 None:intergenic 35.0%
ATTATCATCAGGTTCTGTGA+GGG + chr3_2:75106881-75106900 None:intergenic 35.0%
TATTATCATCAGGTTCTGTG+AGG + chr3_2:75106882-75106901 None:intergenic 35.0%
! CAGTTTTTGTGTGGATTTGA+GGG + chr3_2:75106975-75106994 None:intergenic 35.0%
! ACAGTTTTTGTGTGGATTTG+AGG + chr3_2:75106976-75106995 None:intergenic 35.0%
AACTGTTCATAAACTTGCCA+AGG - chr3_2:75106990-75107009 Msa0424830:CDS 35.0%
GAGAAAACTACTAGGTAGAA+AGG + chr3_2:75107051-75107070 None:intergenic 35.0%
!!! ATAAAGTGCGGCTTTTTTAG+GGG + chr3_2:75107198-75107217 None:intergenic 35.0%
! TTGCGTTTGAGATTTATGCT+CGG - chr3_2:75107722-75107741 Msa0424830:intron 35.0%
CAAGTTCTTAGTTATCAGAG+AGG - chr3_2:75107768-75107787 Msa0424830:intron 35.0%
CAAAAATGTACACTCTCTGA+TGG + chr3_2:75108007-75108026 None:intergenic 35.0%
!! CATCAGAGAGTGTACATTTT+TGG - chr3_2:75108005-75108024 Msa0424830:intron 35.0%
TTGTGAGGGAAATTGAATTG+GGG + chr3_2:75108058-75108077 None:intergenic 35.0%
GTTTGTGAGGGAAATTGAAT+TGG + chr3_2:75108060-75108079 None:intergenic 35.0%
GAACTTAATTACCTGTAACC+TGG + chr3_2:75108085-75108104 None:intergenic 35.0%
TCTAGTCATGTCAACATTCT+CGG + chr3_2:75108502-75108521 None:intergenic 35.0%
TGTTCCGTTGATGTTTAATG+TGG - chr3_2:75108526-75108545 Msa0424830:intron 35.0%
GTTCCGTTGATGTTTAATGT+GGG - chr3_2:75108527-75108546 Msa0424830:intron 35.0%
TTCCGTTGATGTTTAATGTG+GGG - chr3_2:75108528-75108547 Msa0424830:intron 35.0%
TGACACTCAAGTCAGTAAAT+GGG - chr3_2:75108569-75108588 Msa0424830:intron 35.0%
GTATTTATACCATCTCGACA+AGG - chr3_2:75108652-75108671 Msa0424830:intron 35.0%
ACCGGAAGGAATATTTAATG+TGG - chr3_2:75108830-75108849 Msa0424830:CDS 35.0%
TATCTTAACATGTGCCTTGA+GGG - chr3_2:75109121-75109140 Msa0424830:intron 35.0%
TAATTGGTCAACATTTGTGC+AGG - chr3_2:75109307-75109326 Msa0424830:intron 35.0%
AATTGGTCAACATTTGTGCA+GGG - chr3_2:75109308-75109327 Msa0424830:intron 35.0%
TAGCCAAAAAATCACATGTG+TGG - chr3_2:75109347-75109366 Msa0424830:intron 35.0%
!!! TTGCCACACATGTGATTTTT+TGG + chr3_2:75109353-75109372 None:intergenic 35.0%
AAAAAATCACATGTGTGGCA+AGG - chr3_2:75109352-75109371 Msa0424830:intron 35.0%
! AGGTCTTCAAGTTAAACATG+AGG - chr3_2:75109569-75109588 Msa0424830:intron 35.0%
! GGTCTTCAAGTTAAACATGA+GGG - chr3_2:75109570-75109589 Msa0424830:intron 35.0%
ATGTTGACAACTAAGCAGTT+GGG + chr3_2:75109621-75109640 None:intergenic 35.0%
AATGTTGACAACTAAGCAGT+TGG + chr3_2:75109622-75109641 None:intergenic 35.0%
AACTGCTTAGTTGTCAACAT+TGG - chr3_2:75109621-75109640 Msa0424830:intron 35.0%
!! GTATATCCTCTGTATTGGTT+AGG - chr3_2:75109838-75109857 Msa0424830:intron 35.0%
!! TTCTAGTATCCTTGTTGTTG+AGG + chr3_2:75109907-75109926 None:intergenic 35.0%
! ATAAGTCTTGTAGTGGTGAA+TGG - chr3_2:75109926-75109945 Msa0424830:CDS 35.0%
GGAAGTGATTGCAATCATGT+AGG + chr3_2:75106687-75106706 None:intergenic 40.0%
CCATGGATGTATCTTTGAGT+TGG + chr3_2:75106741-75106760 None:intergenic 40.0%
CCAACTCAAAGATACATCCA+TGG - chr3_2:75106738-75106757 Msa0424830:three_prime_UTR 40.0%
AATTGTAGTTGCTGAAGCCA+TGG + chr3_2:75106758-75106777 None:intergenic 40.0%
TTCATGCATCAAAGCCTTTG+CGG - chr3_2:75106816-75106835 Msa0424830:CDS 40.0%
AAAGCCTTTGCGGAATCAAA+TGG - chr3_2:75106826-75106845 Msa0424830:CDS 40.0%
GTAATTGGAAGGAATGAGAG+AGG + chr3_2:75106854-75106873 None:intergenic 40.0%
AGAGAAATCAATGACTGGGA+TGG + chr3_2:75106935-75106954 None:intergenic 40.0%
GGAGAGAGAAATCAATGACT+GGG + chr3_2:75106939-75106958 None:intergenic 40.0%
AGGAGAGAGAAATCAATGAC+TGG + chr3_2:75106940-75106959 None:intergenic 40.0%
TTCTGAATGGGGTTTCTTCA+TGG - chr3_2:75107017-75107036 Msa0424830:CDS 40.0%
CATTGGGAGACCATATTAGT+TGG + chr3_2:75107829-75107848 None:intergenic 40.0%
! TGGTTTGTGAGCTGAACATT+GGG + chr3_2:75107845-75107864 None:intergenic 40.0%
AATGTTCAGCTCACAAACCA+CGG - chr3_2:75107845-75107864 Msa0424830:intron 40.0%
! AATTCCTGAGAGTCTTATGG+AGG - chr3_2:75107868-75107887 Msa0424830:intron 40.0%
! TCACGAGTTTCATGATTTGC+CGG - chr3_2:75107907-75107926 Msa0424830:intron 40.0%
! AAGAAGGAGTTTGGTGACAA+TGG - chr3_2:75107938-75107957 Msa0424830:intron 40.0%
AAATGTACACTCTCTGATGG+AGG + chr3_2:75108004-75108023 None:intergenic 40.0%
CTTAATTACCTGTAACCTGG+TGG + chr3_2:75108082-75108101 None:intergenic 40.0%
CACCCCACATTAAACATCAA+CGG + chr3_2:75108533-75108552 None:intergenic 40.0%
CTGACACTCAAGTCAGTAAA+TGG - chr3_2:75108568-75108587 Msa0424830:intron 40.0%
AAGGAGTTGTTGAGGAGTAA+AGG - chr3_2:75108671-75108690 Msa0424830:intron 40.0%
AGGAGTTGTTGAGGAGTAAA+GGG - chr3_2:75108672-75108691 Msa0424830:intron 40.0%
! ATGAAGGGCACAATTTGTAG+TGG + chr3_2:75108702-75108721 None:intergenic 40.0%
CTACAAATTGTGCCCTTCAT+TGG - chr3_2:75108702-75108721 Msa0424830:intron 40.0%
!!! TGCTTTTAAAATGGACCGCT+GGG + chr3_2:75108936-75108955 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - chr3_2:75108990-75109009 Msa0424830:CDS 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - chr3_2:75108991-75109010 Msa0424830:CDS 40.0%
GTGTTTAACATGTGCCCTAA+GGG + chr3_2:75109008-75109027 None:intergenic 40.0%
GTATCTTAACATGTGCCTTG+AGG - chr3_2:75109120-75109139 Msa0424830:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr3_2:75109138-75109157 None:intergenic 40.0%
! GTGGCAAGGAAATTGATTCA+AGG - chr3_2:75109366-75109385 Msa0424830:intron 40.0%
GGATTCTAATCCTAAGCTCT+CGG + chr3_2:75109397-75109416 None:intergenic 40.0%
! TGACTCTGGCTTACAAATCA+TGG - chr3_2:75109443-75109462 Msa0424830:intron 40.0%
ACAACTAAGCAGTTGGGAAT+GGG + chr3_2:75109615-75109634 None:intergenic 40.0%
CAACATTGGAGATCAACTTG+AGG - chr3_2:75109635-75109654 Msa0424830:intron 40.0%
ATTGGTTAGGCTGTGAGTAA+CGG - chr3_2:75109851-75109870 Msa0424830:intron 40.0%
AGTCACGATTGTCAGATGAA+AGG - chr3_2:75110053-75110072 Msa0424830:CDS 40.0%
GTCACGATTGTCAGATGAAA+GGG - chr3_2:75110054-75110073 Msa0424830:CDS 40.0%
ATTGTCAGATGAAAGGGCTT+TGG - chr3_2:75110060-75110079 Msa0424830:CDS 40.0%
! TTTTAGCACTATACCGAACC+TGG + chr3_2:75110087-75110106 None:intergenic 40.0%
!! ATGGTCTTGTCTAGTTCTAG+AGG - chr3_2:75110122-75110141 Msa0424830:CDS 40.0%
GGTTCCATTTGATTCCGCAA+AGG + chr3_2:75106833-75106852 None:intergenic 45.0%
TTCTGTGAGGGAGTGGTAAT+TGG + chr3_2:75106869-75106888 None:intergenic 45.0%
! TTGCCAAGGCATGTTCTGAA+TGG - chr3_2:75107004-75107023 Msa0424830:CDS 45.0%
! TGCCAAGGCATGTTCTGAAT+GGG - chr3_2:75107005-75107024 Msa0424830:CDS 45.0%
! GTGGTTTGTGAGCTGAACAT+TGG + chr3_2:75107846-75107865 None:intergenic 45.0%
TAAGACTCTCAGGAATTCCG+TGG + chr3_2:75107865-75107884 None:intergenic 45.0%
CGGAATTCCTGAGAGTCTTA+TGG - chr3_2:75107865-75107884 Msa0424830:intron 45.0%
AACTCCTCCATAAGACTCTC+AGG + chr3_2:75107875-75107894 None:intergenic 45.0%
! AACTCCTTCTTTTCCTCCAC+CGG + chr3_2:75107929-75107948 None:intergenic 45.0%
GTGGAGGAAAAGAAGGAGTT+TGG - chr3_2:75107929-75107948 Msa0424830:intron 45.0%
AATTTCCCTCACAAACCACC+AGG - chr3_2:75108064-75108083 Msa0424830:intron 45.0%
! TGTAACCTGGTGGTTTGTGA+GGG + chr3_2:75108072-75108091 None:intergenic 45.0%
CGTTGATGTTTAATGTGGGG+TGG - chr3_2:75108531-75108550 Msa0424830:intron 45.0%
TCAACAACTCCTTGTCGAGA+TGG + chr3_2:75108664-75108683 None:intergenic 45.0%
ATCTCGACAAGGAGTTGTTG+AGG - chr3_2:75108663-75108682 Msa0424830:intron 45.0%
!!! GTGCTTTTAAAATGGACCGC+TGG + chr3_2:75108937-75108956 None:intergenic 45.0%
GGTGTTTAACATGTGCCCTA+AGG + chr3_2:75109009-75109028 None:intergenic 45.0%
CAAGGAATATCCGAGAGCTT+AGG - chr3_2:75109384-75109403 Msa0424830:intron 45.0%
!!! GAGTCATCTGGTTTTGACTC+TGG - chr3_2:75109429-75109448 Msa0424830:intron 45.0%
TTGCCTGCTCATTCTGATGT+TGG - chr3_2:75109513-75109532 Msa0424830:intron 45.0%
AAGCCAACATCAGAATGAGC+AGG + chr3_2:75109519-75109538 None:intergenic 45.0%
GACAACTAAGCAGTTGGGAA+TGG + chr3_2:75109616-75109635 None:intergenic 45.0%
TCACAGCCTAACCAATACAG+AGG + chr3_2:75109847-75109866 None:intergenic 45.0%
TTGGTTAGGCTGTGAGTAAC+GGG - chr3_2:75109852-75109871 Msa0424830:intron 45.0%
TCGAGCAATCCTCAACAACA+AGG - chr3_2:75109895-75109914 Msa0424830:CDS 45.0%
CCAACATCTCTATCTTCTGC+AGG + chr3_2:75109953-75109972 None:intergenic 45.0%
CCTGCAGAAGATAGAGATGT+TGG - chr3_2:75109950-75109969 Msa0424830:CDS 45.0%
TTCTGTAATAGTTCAGGGGC+AGG + chr3_2:75109977-75109996 None:intergenic 45.0%
!! AGAAATTATTATTATTATTA+TGG - chr3_2:75107125-75107144 Msa0424830:intron 5.0%
!!! TTTTTTAACATTTATTTATT+TGG + chr3_2:75110262-75110281 None:intergenic 5.0%
GTGAGGGAGTGGTAATTGGA+AGG + chr3_2:75106865-75106884 None:intergenic 50.0%
! TTTGAGGGTCATCTGAGGTG+AGG + chr3_2:75106960-75106979 None:intergenic 50.0%
GTGGATTTGAGGGTCATCTG+AGG + chr3_2:75106965-75106984 None:intergenic 50.0%
! GCCAAGGCATGTTCTGAATG+GGG - chr3_2:75107006-75107025 Msa0424830:CDS 50.0%
ACCCCATTCAGAACATGCCT+TGG + chr3_2:75107010-75107029 None:intergenic 50.0%
! CGAGTTTCATGATTTGCCGG+TGG - chr3_2:75107910-75107929 Msa0424830:intron 50.0%
! GTTTCATGATTTGCCGGTGG+AGG - chr3_2:75107913-75107932 Msa0424830:intron 50.0%
TTTGCCGGTGGAGGAAAAGA+AGG - chr3_2:75107922-75107941 Msa0424830:intron 50.0%
AAGCTAGTGCCATGCCTGAT+GGG + chr3_2:75107977-75107996 None:intergenic 50.0%
GTACACTCTCTGATGGAGGA+TGG + chr3_2:75108000-75108019 None:intergenic 50.0%
! CTGTAACCTGGTGGTTTGTG+AGG + chr3_2:75108073-75108092 None:intergenic 50.0%
CTCACAAACCACCAGGTTAC+AGG - chr3_2:75108071-75108090 Msa0424830:intron 50.0%
TGCCCTTCATTGGTGTGTTC+CGG - chr3_2:75108712-75108731 Msa0424830:intron 50.0%
CACCGGAACACACCAATGAA+GGG + chr3_2:75108717-75108736 None:intergenic 50.0%
ACACCGGAACACACCAATGA+AGG + chr3_2:75108718-75108737 None:intergenic 50.0%
TGGTCAACATTTGTGCAGGG+AGG - chr3_2:75109311-75109330 Msa0424830:intron 50.0%
CACAACCACACCTTGCTCTA+GGG - chr3_2:75109490-75109509 Msa0424830:intron 50.0%
!! AGATGAAAGGGCTTTGGACC+AGG - chr3_2:75110066-75110085 Msa0424830:CDS 50.0%
!! AAAGGGCTTTGGACCAGGTT+CGG - chr3_2:75110071-75110090 Msa0424830:CDS 50.0%
CATCAGGTTCTGTGAGGGAG+TGG + chr3_2:75106876-75106895 None:intergenic 55.0%
GTGAGCCTTTCTCACCCATC+AGG - chr3_2:75107960-75107979 Msa0424830:intron 55.0%
! CCATGCCTGATGGGTGAGAA+AGG + chr3_2:75107968-75107987 None:intergenic 55.0%
CCTTTCTCACCCATCAGGCA+TGG - chr3_2:75107965-75107984 Msa0424830:intron 55.0%
GAAGCTAGTGCCATGCCTGA+TGG + chr3_2:75107978-75107997 None:intergenic 55.0%
ACTATCCAATGCGAGCCCAG+CGG - chr3_2:75108918-75108937 Msa0424830:CDS 55.0%
GGTGTGGTTGTGGACATGGA+GGG + chr3_2:75109482-75109501 None:intergenic 55.0%
AGGTGTGGTTGTGGACATGG+AGG + chr3_2:75109483-75109502 None:intergenic 55.0%
GCAAGGTGTGGTTGTGGACA+TGG + chr3_2:75109486-75109505 None:intergenic 55.0%
CCTAGAGCAAGGTGTGGTTG+TGG + chr3_2:75109492-75109511 None:intergenic 55.0%
CCACAACCACACCTTGCTCT+AGG - chr3_2:75109489-75109508 Msa0424830:intron 55.0%
! GTTAGGCTGTGAGTAACGGG+AGG - chr3_2:75109855-75109874 Msa0424830:intron 55.0%
GGCAACCCTAGAGCAAGGTG+TGG + chr3_2:75109498-75109517 None:intergenic 60.0%
GAGCAGGCAACCCTAGAGCA+AGG + chr3_2:75109503-75109522 None:intergenic 60.0%
ATGGACCGCTGGGCTCGCAT+TGG + chr3_2:75108926-75108945 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 75106621 75110292 75106621 ID=Msa0424830;Name=Msa0424830
chr3_2 mRNA 75106621 75110292 75106621 ID=Msa0424830-mRNA-1;Parent=Msa0424830;Name=Msa0424830-mRNA-1;_AED=0.00;_eAED=0.00;_QI=136|1|1|1|1|1|4|181|366
chr3_2 exon 75106621 75107053 75106621 ID=Msa0424830-mRNA-1:exon:19152;Parent=Msa0424830-mRNA-1
chr3_2 exon 75107257 75107584 75107257 ID=Msa0424830-mRNA-1:exon:19151;Parent=Msa0424830-mRNA-1
chr3_2 exon 75108821 75109059 75108821 ID=Msa0424830-mRNA-1:exon:19150;Parent=Msa0424830-mRNA-1
chr3_2 exon 75109875 75110292 75109875 ID=Msa0424830-mRNA-1:exon:19149;Parent=Msa0424830-mRNA-1
chr3_2 five_prime_UTR 75110157 75110292 75110157 ID=Msa0424830-mRNA-1:five_prime_utr;Parent=Msa0424830-mRNA-1
chr3_2 CDS 75109875 75110156 75109875 ID=Msa0424830-mRNA-1:cds;Parent=Msa0424830-mRNA-1
chr3_2 CDS 75108821 75109059 75108821 ID=Msa0424830-mRNA-1:cds;Parent=Msa0424830-mRNA-1
chr3_2 CDS 75107257 75107584 75107257 ID=Msa0424830-mRNA-1:cds;Parent=Msa0424830-mRNA-1
chr3_2 CDS 75106802 75107053 75106802 ID=Msa0424830-mRNA-1:cds;Parent=Msa0424830-mRNA-1
chr3_2 three_prime_UTR 75106621 75106801 75106621 ID=Msa0424830-mRNA-1:three_prime_utr;Parent=Msa0424830-mRNA-1
Gene Sequence

>Msa0424830

ATGGCTTCAGCAACTACAATTACATCATCAGAACGGACAAAAGTTCATACATCAAATATTTCATGCATCAAAGCCTTTGCGGAATCAAATGGAACCTCTCTCATTCCTTCCAATTACCACTCCCTCACAGAACCTGATGATAATATTATTGATGTTACAGAGGAGCTTGCAGCTTCCATCCCAGTCATTGATTTCTCTCTCCTCACCTCAGATGACCCTCAAATCCACACAAAAACTGTTCATAAACTTGCCAAGGCATGTTCTGAATGGGGTTTCTTCATGCTCACAAACCACGGAATTCCTGAGAGTCTTATGGAGGAGTTGATGAAAAAATCTCACGAGTTTCATGATTTGCCGGTGGAGGAAAAGAAGGAGTTTGGTGACAATGGTGAGCCTTTCTCACCCATCAGGCATGGCACTAGCTTCCATCCTCCATCAGAGAGTGTACATTTTTGGAGAGATTATCTCAAAGTCTTAACATCTCCCCAATTCAATTTCCCTCACAAACCACCAGGTTACAGGGAGGTTGCATTTGAGTATAGCCAAAAAATCACATGTGTGGCAAGGAAATTGATTCAAGGAATATCCGAGAGCTTAGGATTAGAATCCAATTCTATAATTGAGTCATCTGGTTTTGACTCTGGCTTACAAATCATGGCTGTGAACTTGTACCCTCCATGTCCACAACCACACCTTGCTCTAGGGTTGCCTGCTCATTCTGATGTTGGCTTCTTGACCTTCCTTATACAAAATGGAATTGGAGGTCTTCAAGTTAAACATGAGGGTAAATGGGTCAATGTGAATCCCATTCCCAACTGCTTAGTTGTCAACATTGGAGATCAACTTGAGGCTGTGAGTAACGGGAGGTATGAGAGTGTGTTACATCGAGCAATCCTCAACAACAAGGATACTAGAATAAGTCTTGTAGTGGTGAATGGACCTGCAGAAGATAGAGATGTTGGACCTGCCCCTGAACTATTACAGAAAGAAAAGCCATTGTTCAAAAGTATCAAGTATCGTGATTATTTCTTAGTTCAACAGAAGTCACGATTGTCAGATGAAAGGGCTTTGGACCAGGTTCGGTATAGTGCTAAAAAATGA
Protein sequence

>Msa0424830

MASATTITSSERTKVHTSNISCIKAFAESNGTSLIPSNYHSLTEPDDNIIDVTEELAASIPVIDFSLLTSDDPQIHTKTVHKLAKACSEWGFFMLTNHGIPESLMEELMKKSHEFHDLPVEEKKEFGDNGEPFSPIRHGTSFHPPSESVHFWRDYLKVLTSPQFNFPHKPPGYREVAFEYSQKITCVARKLIQGISESLGLESNSIIESSGFDSGLQIMAVNLYPPCPQPHLALGLPAHSDVGFLTFLIQNGIGGLQVKHEGKWVNVNPIPNCLVVNIGDQLEAVSNGRYESVLHRAILNNKDTRISLVVVNGPAEDRDVGPAPELLQKEKPLFKSIKYRDYFLVQQKSRLSDERALDQVRYSAKK*