AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0377650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0377650 MtrunA17_Chr3g0128901 85.736 645 38 2 1 595 1 641 0.0 1117
Msa0377650 MtrunA17_Chr3g0128881 80.665 662 59 6 1 595 1 660 0.0 1056
Msa0377650 MtrunA17_Chr5g0432571 53.390 354 157 4 13 360 28 379 9.12e-118 368
Msa0377650 MtrunA17_Chr8g0347181 49.333 375 170 7 5 363 11 381 5.22e-111 360
Msa0377650 MtrunA17_Chr3g0126481 40.822 365 202 7 6 359 3 364 4.00e-89 292
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0377650 AT3G56320.1 49.042 522 247 9 21 534 35 545 3.84e-160 471
Msa0377650 AT3G56320.6 49.042 522 247 9 21 534 35 545 3.84e-160 471
Msa0377650 AT3G56320.3 49.042 522 247 9 21 534 35 545 3.84e-160 471
Msa0377650 AT3G56320.7 49.042 522 247 9 21 534 35 545 3.84e-160 471
Msa0377650 AT3G56320.2 49.042 522 247 9 21 534 35 545 3.84e-160 471
Msa0377650 AT3G56320.5 49.042 522 247 9 21 534 35 545 3.84e-160 471
Msa0377650 AT3G56320.4 49.042 522 247 9 21 534 35 545 3.84e-160 471
Msa0377650 AT2G40520.1 45.416 469 224 8 21 483 28 470 3.52e-133 399
Msa0377650 AT2G40520.4 45.416 469 224 8 21 483 28 470 3.52e-133 399
Msa0377650 AT2G40520.2 45.416 469 224 8 21 483 28 470 3.52e-133 399
Msa0377650 AT2G40520.6 45.416 469 224 8 21 483 28 470 3.52e-133 399
Msa0377650 AT2G40520.3 45.416 469 224 8 21 483 28 470 3.52e-133 399
Msa0377650 AT2G40520.5 45.416 469 224 8 21 483 28 470 3.52e-133 399
Msa0377650 AT3G51620.3 53.846 351 157 3 24 369 32 382 4.89e-119 372
Msa0377650 AT3G51620.2 53.846 351 157 3 24 369 32 382 5.64e-119 372
Msa0377650 AT3G61690.2 48.305 354 168 6 21 363 34 383 2.01e-101 334
Msa0377650 AT3G61690.3 48.305 354 168 6 21 363 34 383 4.01e-101 334
Msa0377650 AT3G61690.1 48.305 354 168 6 21 363 34 383 4.01e-101 334
Msa0377650 AT3G51620.1 49.020 153 76 2 219 369 169 321 1.26e-35 143
Msa0377650 AT3G51620.1 51.079 139 65 1 24 159 32 170 1.85e-33 136

Find 179 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTATGCTCTGCGCTTTC+TGG 0.124072 3_1:-78252451 Msa0377650:CDS
TTCCCAAACTCAGTTCTTTC+AGG 0.177073 3_1:+78250086 None:intergenic
GGATGAGGAGCTTTGGTTTA+TGG 0.181696 3_1:-78253955 Msa0377650:CDS
TAACACTTACCAACAATTTC+TGG 0.199754 3_1:+78251474 None:intergenic
GTGCGTCTTCCTCACAATTC+CGG 0.233458 3_1:+78255249 None:intergenic
AACATATGCAGTTGAAATAT+TGG 0.240077 3_1:-78251734 Msa0377650:CDS
ACTTATGGCCTTGAAGAAAT+AGG 0.248024 3_1:-78250565 Msa0377650:CDS
TCCTTTCCCATTTCTATTCA+AGG 0.257627 3_1:+78250897 None:intergenic
AGCAAAACGACATATTAATT+TGG 0.259753 3_1:-78255432 Msa0377650:five_prime_UTR
AAGAATTATGTCACCATATA+TGG 0.263874 3_1:-78251519 Msa0377650:CDS
CTTTGTTCCCAATGTCTTAG+AGG 0.266003 3_1:+78250030 None:intergenic
ATCGAATTGGATTCGCTCTT+AGG 0.267225 3_1:-78251002 Msa0377650:CDS
TGCGTCTTCCTCACAATTCC+GGG 0.285766 3_1:+78255250 None:intergenic
GAGTCCAGCCATCTGATTAA+AGG 0.288341 3_1:+78252470 None:intergenic
AGGCTGATTGGAGGTTACTA+TGG 0.289238 3_1:-78253843 Msa0377650:CDS
ATGAACACCTTGAATAGAAA+TGG 0.297585 3_1:-78250904 Msa0377650:CDS
ATCCCTGAAAGAACTGAGTT+TGG 0.303245 3_1:-78250089 Msa0377650:CDS
AAGGAGATCCTTAAGCTTCC+AGG 0.314389 3_1:-78250961 Msa0377650:CDS
CAAGATGTTAATGTACTTGA+TGG 0.323385 3_1:+78251252 None:intergenic
AGTTGTATTTGTAGTGTTAT+TGG 0.327211 3_1:+78255510 None:intergenic
GATGTTCCTATTCCTGCATT+TGG 0.330206 3_1:-78250859 Msa0377650:CDS
GGGAACAAAGGATCAGAAAA+AGG 0.342380 3_1:-78250068 Msa0377650:CDS
CATCAAGTACATTAACATCT+TGG 0.350644 3_1:-78251251 Msa0377650:CDS
GGGAACAAAGGATCGGAAAA+AGG 0.355073 3_1:-78250017 Msa0377650:CDS
TATTATGAGAGCCGAATTCT+TGG 0.355737 3_1:-78251778 Msa0377650:CDS
TTCTTTGTCCTGGAAGCTTA+AGG 0.356817 3_1:+78250953 None:intergenic
CCAGTACCAAATGCAGGAAT+AGG 0.362227 3_1:+78250853 None:intergenic
TCTGAAGAGCCTGTCCTTGT+TGG 0.364547 3_1:-78250826 Msa0377650:CDS
GTTCCTCCACAGCCAACTTA+TGG 0.367868 3_1:-78250580 Msa0377650:CDS
ATAGGGAAATCGCGAGGAAC+AGG 0.368015 3_1:-78250547 Msa0377650:CDS
TAAGGCTTGTGGACCATATA+TGG 0.369108 3_1:+78251506 None:intergenic
TTTGAGGCGATGAAGAATTC+TGG 0.369752 3_1:+78250146 None:intergenic
GCAGGCAATTTACATCGAAT+TGG 0.370855 3_1:-78251015 Msa0377650:intron
GTTTGGTGCTCGAAAGCTTA+AGG 0.371049 3_1:-78250980 Msa0377650:CDS
CCTATTCCTGCATTTGGTAC+TGG 0.379307 3_1:-78250853 Msa0377650:CDS
GCGATTTCCCTATTTCTTCA+AGG 0.381372 3_1:+78250557 None:intergenic
TAACTGCAGGTATTCGTGTT+TGG 0.384662 3_1:-78253100 Msa0377650:intron
CTGACAATTAATGGGAGTAT+TGG 0.386485 3_1:-78255398 Msa0377650:five_prime_UTR
TCCCTGAAAGAACTGAGTTT+GGG 0.388572 3_1:-78250088 Msa0377650:CDS
TGTTCCAAGTCGGGCATTGC+AGG 0.388800 3_1:-78249954 Msa0377650:CDS
CTTATGGCCTTGAAGAAATA+GGG 0.389378 3_1:-78250564 Msa0377650:CDS
TCTCAATGGATGAGGAGCTT+TGG 0.392926 3_1:-78253962 Msa0377650:CDS
GGAATAGGAACATCAATATC+AGG 0.393746 3_1:+78250868 None:intergenic
CAATTCCGGGTTCGTGTGTC+GGG 0.393792 3_1:+78255263 None:intergenic
TGACAATTAATGGGAGTATT+GGG 0.393888 3_1:-78255397 Msa0377650:five_prime_UTR
ATTGGATTCGCTCTTAGGTT+TGG 0.398308 3_1:-78250997 Msa0377650:CDS
AATTTCTGGTAGGGAGGATA+AGG 0.401918 3_1:+78251488 None:intergenic
TGCTTGCACCACAACAAAAC+TGG 0.406419 3_1:-78250666 Msa0377650:CDS
CTTTGTTGACACTGCGGCCT+AGG 0.411152 3_1:+78251206 None:intergenic
TGAAAGTGTTGAAGATGATT+TGG 0.412844 3_1:-78253017 Msa0377650:CDS
TGGTGTAGTAGCGCCTTTAG+AGG 0.414140 3_1:+78249979 None:intergenic
CATGGTGTGCACCAAGAATT+CGG 0.416862 3_1:+78251767 None:intergenic
GGCGAAGTCTCGGATGCCTT+TGG 0.417078 3_1:+78251286 None:intergenic
TGCTCTGCGCTTTCTGGAGC+AGG 0.418440 3_1:-78252445 Msa0377650:intron
CTTCCACCAGATTACCATTC+CGG 0.418559 3_1:-78255166 Msa0377650:five_prime_UTR
TTCGCCTCAGAAACAACATT+TGG 0.419282 3_1:+78253894 None:intergenic
AATATCTCCATCTGGAAGAT+AGG 0.421218 3_1:+78253060 None:intergenic
CAAAAGCAATTTACCATGTC+AGG 0.424060 3_1:+78250514 None:intergenic
GAATTGTGCATAGTACTTCC+CGG 0.426990 3_1:+78253919 None:intergenic
AACTCGCCGGAATGGTAATC+TGG 0.431804 3_1:+78255160 None:intergenic
CTCAGGTTGACCAACTTGTC+GGG 0.435786 3_1:-78251849 Msa0377650:intron
GCTCCACCCATTCTTTGTCC+TGG 0.435917 3_1:+78250943 None:intergenic
TCCTCCCTACCAGAAATTGT+TGG 0.446497 3_1:-78251483 Msa0377650:intron
TTTCCTGTTCTTTCAAGCAT+TGG 0.448377 3_1:-78250208 Msa0377650:CDS
ACAATTCCGGGTTCGTGTGT+CGG 0.448580 3_1:+78255262 None:intergenic
TGTTTCATCCTCTAAGACAT+TGG 0.449458 3_1:-78250038 Msa0377650:CDS
TCCCAAACTCAGTTCTTTCA+GGG 0.453462 3_1:+78250087 None:intergenic
TGTTGGTTAAGCAAGGAGTA+TGG 0.454180 3_1:+78253990 None:intergenic
CGTGTGTCGGGTTGGCGACC+CGG 0.462629 3_1:+78255275 None:intergenic
GTCAAGTCAATATCTCCATC+TGG 0.466076 3_1:+78253052 None:intergenic
GGCTGATTGGAGGTTACTAT+GGG 0.468299 3_1:-78253842 Msa0377650:CDS
ACTACTACAGCACATTTGAC+TGG 0.470236 3_1:-78251545 Msa0377650:CDS
TGTAGTGTTATTGGCAGCAA+TGG 0.472585 3_1:+78255519 None:intergenic
TTTGCCTGCAATGCCCGACT+TGG 0.474276 3_1:+78249950 None:intergenic
TTGCCAATGCTTGAAAGAAC+AGG 0.474290 3_1:+78250205 None:intergenic
AATGCCCGACTTGGAACAAC+TGG 0.474339 3_1:+78249959 None:intergenic
GTTTCATCCTCTAAGACATT+GGG 0.476352 3_1:-78250037 Msa0377650:CDS
GTTGGCTGTGGAGGAACATT+CGG 0.479529 3_1:+78250586 None:intergenic
GTGAGGAAGACGCACAGAAT+CGG 0.480119 3_1:-78255241 Msa0377650:five_prime_UTR
TCTCAGGTTGACCAACTTGT+CGG 0.487700 3_1:-78251850 Msa0377650:intron
TCCGGGTTCGTGTGTCGGGT+TGG 0.489095 3_1:+78255267 None:intergenic
CCTCAAATATATATCGAGTT+CGG 0.490190 3_1:-78250130 Msa0377650:CDS
TGAACACCTTGAATAGAAAT+GGG 0.494237 3_1:-78250903 Msa0377650:CDS
TAAGCTTCCAGGACAAAGAA+TGG 0.494792 3_1:-78250950 Msa0377650:CDS
TACACCAGTTGTTCCAAGTC+GGG 0.500518 3_1:-78249963 Msa0377650:CDS
GTAGTGTTATTGGCAGCAAT+GGG 0.501601 3_1:+78255520 None:intergenic
AGATTACCATTCCGGCGAGT+TGG 0.502168 3_1:-78255158 Msa0377650:five_prime_UTR
TAACCAACAGCTGTTCTCAA+TGG 0.505452 3_1:-78253976 Msa0377650:CDS
AAATTCACGAGGCGAAGTCT+CGG 0.506262 3_1:+78251276 None:intergenic
CCGAACTCGATATATATTTG+AGG 0.507941 3_1:+78250130 None:intergenic
TTTCTGAGGCGAACAGAAAG+AGG 0.508759 3_1:-78253884 Msa0377650:CDS
ATCTCCTTTAATCAGATGGC+TGG 0.511050 3_1:-78252474 Msa0377650:CDS
TTATGGCTGAAGAGAGGGCC+CGG 0.513461 3_1:-78253938 Msa0377650:CDS
GGAGACTGTGACAGTTACTA+TGG 0.513710 3_1:-78250805 Msa0377650:CDS
TGACATCTCCTTTAATCAGA+TGG 0.515391 3_1:-78252478 Msa0377650:CDS
TACTCGGATGGAGAAGAAGA+TGG 0.516473 3_1:-78249918 Msa0377650:CDS
AATTGTGCATAGTACTTCCC+GGG 0.517882 3_1:+78253920 None:intergenic
CGTGATCCAACTCGCCGGAA+TGG 0.518694 3_1:+78255152 None:intergenic
CAACTGCATATGTTGAGAGC+AGG 0.519594 3_1:+78251743 None:intergenic
GTATGCAATCTACTTGAAAG+TGG 0.522636 3_1:-78252986 Msa0377650:CDS
GGTAATCTGGTGGAAGCGGC+CGG 0.523526 3_1:+78255173 None:intergenic
AAATTGTGGTGATGAGGGAC+TGG 0.525859 3_1:+78250726 None:intergenic
GGATATGTGCTTTGTTCCAA+AGG 0.526338 3_1:-78251302 Msa0377650:CDS
CTCTAAGACATTGGGAACAA+AGG 0.528110 3_1:-78250029 Msa0377650:CDS
TTGGTTTATGGCTGAAGAGA+GGG 0.528132 3_1:-78253943 Msa0377650:CDS
TCAACCAAATGTTGTTTCTG+AGG 0.531314 3_1:-78253898 Msa0377650:CDS
TTATACTTTGTTTGAAGACA+TGG 0.531505 3_1:+78251821 None:intergenic
ATTTCTTCAAGGCCATAAGT+TGG 0.531691 3_1:+78250568 None:intergenic
AGCATCTCATCAATCTGAGC+AGG 0.532090 3_1:-78250170 Msa0377650:CDS
TCAAGGCCATAAGTTGGCTG+TGG 0.535106 3_1:+78250574 None:intergenic
TCACAGTCTCCAACAAGGAC+AGG 0.537823 3_1:+78250817 None:intergenic
GTATAATCTTAGTCAAAGCC+TGG 0.544124 3_1:-78251804 Msa0377650:CDS
AAGCTTCCAGGACAAAGAAT+GGG 0.548125 3_1:-78250949 Msa0377650:CDS
CAAGTCCTTTGAGCTCTCAA+AGG 0.550937 3_1:-78250236 Msa0377650:intron
GAATGGTAATCTGGTGGAAG+CGG 0.551619 3_1:+78255169 None:intergenic
TCCGGTGGTTCATCCTCTAA+AGG 0.551979 3_1:-78249992 Msa0377650:CDS
GCCAACCCGACACACGAACC+CGG 0.552891 3_1:-78255268 Msa0377650:five_prime_UTR
AGGCCATAAGTTGGCTGTGG+AGG 0.557219 3_1:+78250577 None:intergenic
AGAACTGAGTTTGGGAACAA+AGG 0.559095 3_1:-78250080 Msa0377650:CDS
AAGAATGGGTGGAGCACTTG+AGG 0.561202 3_1:-78250935 Msa0377650:CDS
AACGGTGGAATCGAGCGTCT+CGG 0.561383 3_1:+78255218 None:intergenic
GCATCAAATTGTGGTGATGA+GGG 0.561475 3_1:+78250721 None:intergenic
CTTACCAACAATTTCTGGTA+GGG 0.561884 3_1:+78251479 None:intergenic
AGCATCAAATTGTGGTGATG+AGG 0.563396 3_1:+78250720 None:intergenic
GCCTTTAGAGGATGAACCAC+CGG 0.571281 3_1:+78249991 None:intergenic
GCCGCGAAAACGAGTGGGAA+CGG 0.573561 3_1:+78255200 None:intergenic
TGGTATATGTATTATCATAG+AGG 0.573998 3_1:-78250646 Msa0377650:CDS
AAGTCGGGCATTGCAGGCAA+AGG 0.574407 3_1:-78249948 Msa0377650:CDS
ACTTACCAACAATTTCTGGT+AGG 0.575839 3_1:+78251478 None:intergenic
CTACTACAGCACATTTGACT+GGG 0.576336 3_1:-78251544 Msa0377650:CDS
GGTAGGGAGGATAAGGCTTG+TGG 0.579729 3_1:+78251495 None:intergenic
ATCTTCCTTTGAGAGCTCAA+AGG 0.581581 3_1:+78250231 None:intergenic
GATCACGATTCTGTCTACCT+TGG 0.582371 3_1:-78255136 Msa0377650:five_prime_UTR
ATCAGTGCGCGGTCCTCTAG+AGG 0.583009 3_1:-78251683 Msa0377650:intron
TTTGGTTTATGGCTGAAGAG+AGG 0.583512 3_1:-78253944 Msa0377650:CDS
ACAGCTGTTCTCAATGGATG+AGG 0.584883 3_1:-78253970 Msa0377650:CDS
GAACAGCTGTTGGTTAAGCA+AGG 0.591655 3_1:+78253983 None:intergenic
TTTGTTCAGAGGCTGATTGG+AGG 0.592781 3_1:-78253852 Msa0377650:CDS
AAGACATAACTCACCTCTAG+AGG 0.594984 3_1:+78251670 None:intergenic
ACCAACAATTTCTGGTAGGG+AGG 0.599391 3_1:+78251482 None:intergenic
CGAATTCTTGGTGCACACCA+TGG 0.601306 3_1:-78251766 Msa0377650:CDS
AGCATATCAGCATCAAATTG+CGG 0.605856 3_1:+78250685 None:intergenic
GGGCTGTGCAACGAGCGGCA+TGG 0.606132 3_1:+78250747 None:intergenic
AGACATTGGGAACAAAGGAT+CGG 0.609090 3_1:-78250024 Msa0377650:CDS
TATGGCTGAAGAGAGGGCCC+GGG 0.609268 3_1:-78253937 Msa0377650:CDS
TCGGCTCTCATAATAGCACC+AGG 0.612477 3_1:+78251786 None:intergenic
GAGAAATCAGAATGCGATGG+AGG 0.613094 3_1:-78251364 Msa0377650:CDS
GGAATCGCCGCGAAAACGAG+TGG 0.613218 3_1:+78255194 None:intergenic
ACTCGGATGGAGAAGAAGAT+GGG 0.613497 3_1:-78249917 Msa0377650:CDS
AGCATATCAGCATCAAATTG+TGG 0.614031 3_1:+78250712 None:intergenic
TCGCCGGAATGGTAATCTGG+TGG 0.614764 3_1:+78255163 None:intergenic
AGGCAAAGGAGAAGTGTACT+CGG 0.617423 3_1:-78249934 Msa0377650:CDS
AAAGGAGAAGTGTACTCGGA+TGG 0.622221 3_1:-78249930 Msa0377650:CDS
CATCCATTGAGAACAGCTGT+TGG 0.622748 3_1:+78253973 None:intergenic
CTACACCAGTTGTTCCAAGT+CGG 0.625328 3_1:-78249964 Msa0377650:CDS
CTTCCAGGACAAAGAATGGG+TGG 0.626874 3_1:-78250946 Msa0377650:CDS
GCAGAGAAATCAGAATGCGA+TGG 0.627043 3_1:-78251367 Msa0377650:intron
CATACAACAAATACGTGCGC+AGG 0.630522 3_1:-78252936 Msa0377650:intron
AATTGTGGTGATGAGGGACT+GGG 0.637522 3_1:+78250727 None:intergenic
CACACGAACCCGGAATTGTG+AGG 0.649650 3_1:-78255258 Msa0377650:five_prime_UTR
ATAGAAATGGGAAAGGACAA+AGG 0.653507 3_1:-78250891 Msa0377650:CDS
ACCTTGAATAGAAATGGGAA+AGG 0.654152 3_1:-78250898 Msa0377650:CDS
TAGGGAAATCGCGAGGAACA+GGG 0.654764 3_1:-78250546 Msa0377650:CDS
GGACTGGGCTGTGCAACGAG+CGG 0.654982 3_1:+78250742 None:intergenic
AGAATCGTGATCCAACTCGC+CGG 0.658236 3_1:+78255147 None:intergenic
GGATGAAAGAAAGTCTGACT+CGG 0.660418 3_1:+78250607 None:intergenic
CAATCTACTTGAAAGTGGAG+AGG 0.661750 3_1:-78252981 Msa0377650:CDS
AACTGTCACAGTCTCCAACA+AGG 0.665217 3_1:+78250812 None:intergenic
GACTGTGACAGTTACTATGG+CGG 0.665616 3_1:-78250802 Msa0377650:CDS
AGGGACTTACATACCTGACA+TGG 0.666188 3_1:-78250527 Msa0377650:intron
GAATCGCCGCGAAAACGAGT+GGG 0.668176 3_1:+78255195 None:intergenic
CTAGGCCGCAGTGTCAACAA+AGG 0.669859 3_1:-78251205 Msa0377650:intron
CTGATTGGAGGTTACTATGG+GGG 0.677599 3_1:-78253840 Msa0377650:CDS
CATATGTTGAGAGCAGGCCA+TGG 0.683524 3_1:+78251749 None:intergenic
GCTGATTGGAGGTTACTATG+GGG 0.687909 3_1:-78253841 Msa0377650:CDS
GCGAAAACGAGTGGGAACGG+TGG 0.691551 3_1:+78255203 None:intergenic
AATTACCTTTGTTGACACTG+CGG 0.695204 3_1:+78251200 None:intergenic
GAAGAAATAGGGAAATCGCG+AGG 0.719824 3_1:-78250553 Msa0377650:CDS
TACTTGATGGAAAATTCACG+AGG 0.737950 3_1:+78251265 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGAAAAAACAATTTTTT+AGG + chr3_1:78250447-78250466 None:intergenic 10.0%
!!! AAAACTATTTTTTGTTTATT+TGG - chr3_1:78250564-78250583 Msa0377650:CDS 10.0%
!! ATATAAAACATCAATAAATT+TGG + chr3_1:78252220-78252239 None:intergenic 10.0%
!! AAAAGATAATATGTTTATTA+CGG + chr3_1:78252315-78252334 None:intergenic 10.0%
!!! AATAAACATATTATCTTTTA+TGG - chr3_1:78252316-78252335 Msa0377650:intron 10.0%
!!! ATAAACATATTATCTTTTAT+GGG - chr3_1:78252317-78252336 Msa0377650:intron 10.0%
!!! TATTTTTTGTTTATTTGGTT+TGG - chr3_1:78250569-78250588 Msa0377650:CDS 15.0%
!!! ACATTTTCCTAAATTATTTT+CGG - chr3_1:78251223-78251242 Msa0377650:CDS 15.0%
!!! ATAATGTTTACATAGTTTTT+TGG - chr3_1:78252038-78252057 Msa0377650:intron 15.0%
!! TTTAAATTTCAAAAGCTTTA+AGG - chr3_1:78252241-78252260 Msa0377650:intron 15.0%
!! TATTATTATTATTATTCGCA+CGG + chr3_1:78255085-78255104 None:intergenic 15.0%
!! AAAAAAACACTGACAATTAA+TGG - chr3_1:78250034-78250053 Msa0377650:CDS 20.0%
!! AAAAAACACTGACAATTAAT+GGG - chr3_1:78250035-78250054 Msa0377650:CDS 20.0%
!!! CTTGATTTTATAGATTTGTA+TGG - chr3_1:78250802-78250821 Msa0377650:CDS 20.0%
!! TTGTACGAAATTATAATTCT+AGG - chr3_1:78250929-78250948 Msa0377650:CDS 20.0%
!! AAAAACAAACCAAAACAAAA+TGG + chr3_1:78251114-78251133 None:intergenic 20.0%
!!! ATATTATATGAGTTGGAAAA+AGG + chr3_1:78251881-78251900 None:intergenic 20.0%
!! TCACAATTATTTATTTACTC+TGG - chr3_1:78252135-78252154 Msa0377650:intron 20.0%
!! AAACATCAATAAATTTGGAA+TGG + chr3_1:78252215-78252234 None:intergenic 20.0%
!!! ATTTTTCATTTGCTGTTTTT+TGG - chr3_1:78252621-78252640 Msa0377650:intron 20.0%
!! TCATTTAAAAACAAATTCTC+AGG - chr3_1:78253575-78253594 Msa0377650:intron 20.0%
!!! ATTAAAGCATCAATTGATTA+CGG - chr3_1:78254270-78254289 Msa0377650:intron 20.0%
!!! TATATCATCCTAAATGTTTT+TGG - chr3_1:78254988-78255007 Msa0377650:intron 20.0%
! AGTTGTATTTGTAGTGTTAT+TGG + chr3_1:78249934-78249953 None:intergenic 25.0%
! AGCAAAACGACATATTAATT+TGG - chr3_1:78250009-78250028 Msa0377650:CDS 25.0%
!! GAAAGTTTTCGTCAATTAAT+TGG - chr3_1:78250066-78250085 Msa0377650:CDS 25.0%
! TTTACCTCAAAAACCAAAAA+AGG + chr3_1:78250337-78250356 None:intergenic 25.0%
! ATGAAGTTCTTCAATTGAAT+TGG - chr3_1:78250831-78250850 Msa0377650:CDS 25.0%
!! TTCTTCAATTGAATTGGTTT+AGG - chr3_1:78250837-78250856 Msa0377650:CDS 25.0%
! TCACAGTTACAAAATCATTA+GGG + chr3_1:78250880-78250899 None:intergenic 25.0%
! ATCACAGTTACAAAATCATT+AGG + chr3_1:78250881-78250900 None:intergenic 25.0%
!!! ACACATTTTCCATTTTGTTT+TGG - chr3_1:78251102-78251121 Msa0377650:intron 25.0%
!!! TTGTAGTGTTATTTAACCTT+TGG - chr3_1:78251349-78251368 Msa0377650:CDS 25.0%
!!! GATTGCTGTTTAAAATTGAT+TGG - chr3_1:78251772-78251791 Msa0377650:CDS 25.0%
! CAGTATCATATTATATGAGT+TGG + chr3_1:78251888-78251907 None:intergenic 25.0%
! AATATGATACTGCACAATAT+CGG - chr3_1:78251896-78251915 Msa0377650:intron 25.0%
! AAAATTCAGCTACAAAGTTT+AGG + chr3_1:78251953-78251972 None:intergenic 25.0%
!! CTTTGTAGCTGAATTTTAAA+AGG - chr3_1:78251956-78251975 Msa0377650:intron 25.0%
! GCTTCAATTGAATAATATTG+AGG - chr3_1:78252106-78252125 Msa0377650:intron 25.0%
!!! TTTGTTGTATGTCTTTTACT+TGG + chr3_1:78252496-78252515 None:intergenic 25.0%
! ATTTACATCCTATGTGAAAA+AGG - chr3_1:78252747-78252766 Msa0377650:intron 25.0%
!!! TTCACTTTTTCTCTTTTTCT+CGG - chr3_1:78252806-78252825 Msa0377650:intron 25.0%
!! TTAAACACAATTTTCCAATC+AGG + chr3_1:78252836-78252855 None:intergenic 25.0%
!! TAAGACTTCCTTTTTATGTT+TGG - chr3_1:78252888-78252907 Msa0377650:intron 25.0%
! TATAAACTGTACAAACTAAC+AGG + chr3_1:78253118-78253137 None:intergenic 25.0%
! TTGTACAGTTTATATAAAGC+AGG - chr3_1:78253124-78253143 Msa0377650:intron 25.0%
! AAAAATGAGTCAAAAAAGAC+AGG + chr3_1:78253265-78253284 None:intergenic 25.0%
!! TTATACTTTGTTTGAAGACA+TGG + chr3_1:78253623-78253642 None:intergenic 25.0%
! AACATATGCAGTTGAAATAT+TGG - chr3_1:78253707-78253726 Msa0377650:intron 25.0%
! TGTAAATACAAATGCTGAAA+GGG + chr3_1:78253815-78253834 None:intergenic 25.0%
! ATGTAAATACAAATGCTGAA+AGG + chr3_1:78253816-78253835 None:intergenic 25.0%
! AAGAATTATGTCACCATATA+TGG - chr3_1:78253922-78253941 Msa0377650:CDS 25.0%
!! AAATTGTTGGTAAGTGTTAA+TGG - chr3_1:78253971-78253990 Msa0377650:CDS 25.0%
!! AATTGTTGGTAAGTGTTAAT+GGG - chr3_1:78253972-78253991 Msa0377650:CDS 25.0%
! TGGTATATGTATTATCATAG+AGG - chr3_1:78254795-78254814 Msa0377650:intron 25.0%
! AGAAACATCCAAAAACATTT+AGG + chr3_1:78254999-78255018 None:intergenic 25.0%
!! TGACAATTAATGGGAGTATT+GGG - chr3_1:78250044-78250063 Msa0377650:CDS 30.0%
! CTGTATTTGTGTAACGTTTT+TGG + chr3_1:78250104-78250123 None:intergenic 30.0%
!!! TCTCTCTGTTTTTAAGTAAC+CGG - chr3_1:78250147-78250166 Msa0377650:CDS 30.0%
!!! GAAACCTTTTTTGGTTTTTG+AGG - chr3_1:78250330-78250349 Msa0377650:intron 30.0%
ATTCTTGTGATTGGACTTAA+TGG - chr3_1:78250408-78250427 Msa0377650:intron 30.0%
TTCTTGTGATTGGACTTAAT+GGG - chr3_1:78250409-78250428 Msa0377650:intron 30.0%
GTTATGTCATTCTCATTGTT+TGG - chr3_1:78250503-78250522 Msa0377650:intron 30.0%
!! AGCCTTGTTAAATTCACTTT+AGG - chr3_1:78250767-78250786 Msa0377650:CDS 30.0%
! GCCTTGTTAAATTCACTTTA+GGG - chr3_1:78250768-78250787 Msa0377650:CDS 30.0%
ACCCTAAAGTGAATTTAACA+AGG + chr3_1:78250772-78250791 None:intergenic 30.0%
GTAGACACCGAAAATAATTT+AGG + chr3_1:78251233-78251252 None:intergenic 30.0%
AGTACTAACAAGGAAATGAA+TGG + chr3_1:78251284-78251303 None:intergenic 30.0%
!!! TAACCTTTGGTTTGTTGTTT+TGG - chr3_1:78251362-78251381 Msa0377650:CDS 30.0%
AAACCAAAACAACAAACCAA+AGG + chr3_1:78251368-78251387 None:intergenic 30.0%
!!! GGATTATTGATTTTGTTCAG+AGG - chr3_1:78251578-78251597 Msa0377650:intron 30.0%
! TTTTAACCTTCGATTGTTGT+AGG - chr3_1:78251657-78251676 Msa0377650:intron 30.0%
ATAGAAAGCAAAAAGGGAAA+TGG + chr3_1:78251806-78251825 None:intergenic 30.0%
GGAAACATAGAAAGCAAAAA+GGG + chr3_1:78251812-78251831 None:intergenic 30.0%
AGGAAACATAGAAAGCAAAA+AGG + chr3_1:78251813-78251832 None:intergenic 30.0%
!!! AAGGTTTTATTTTCTGCTCA+AGG + chr3_1:78251862-78251881 None:intergenic 30.0%
TTAAGATTTGCACCTTTACA+AGG + chr3_1:78252019-78252038 None:intergenic 30.0%
! CATCAATAAATTTGGAATGG+AGG + chr3_1:78252212-78252231 None:intergenic 30.0%
!! TGATGAGACCAATTTGTTTT+CGG + chr3_1:78252269-78252288 None:intergenic 30.0%
!! TGAAAGTGTTGAAGATGATT+TGG - chr3_1:78252424-78252443 Msa0377650:intron 30.0%
! AATCTTAAACGCTATTTCAG+AGG + chr3_1:78252604-78252623 None:intergenic 30.0%
! TCCTTTTTATGTTTGGCAAT+TGG - chr3_1:78252895-78252914 Msa0377650:intron 30.0%
TCCAATTGCCAAACATAAAA+AGG + chr3_1:78252899-78252918 None:intergenic 30.0%
AGCTATAGATATTAAGCACA+CGG + chr3_1:78253078-78253097 None:intergenic 30.0%
ATTGTTGAGTAGAACTAATG+TGG - chr3_1:78253153-78253172 Msa0377650:intron 30.0%
ATTATATCTTATGCCGTGTT+AGG - chr3_1:78253205-78253224 Msa0377650:intron 30.0%
TAACACTTACCAACAATTTC+TGG + chr3_1:78253970-78253989 None:intergenic 30.0%
! ATTGTTGGTAAGTGTTAATG+GGG - chr3_1:78253973-78253992 Msa0377650:CDS 30.0%
! AAGAGCTTCTGAAAAATTAC+AGG - chr3_1:78254117-78254136 Msa0377650:intron 30.0%
! AGAGCTTCTGAAAAATTACA+GGG - chr3_1:78254118-78254137 Msa0377650:intron 30.0%
CAAGATGTTAATGTACTTGA+TGG + chr3_1:78254192-78254211 None:intergenic 30.0%
CATCAAGTACATTAACATCT+TGG - chr3_1:78254190-78254209 Msa0377650:intron 30.0%
!!! AGGTTGTTGTCATTTTTTAG+AGG + chr3_1:78254218-78254237 None:intergenic 30.0%
CTAAAAAATGACAACAACCT+AGG - chr3_1:78254218-78254237 Msa0377650:intron 30.0%
ATGAACACCTTGAATAGAAA+TGG - chr3_1:78254537-78254556 Msa0377650:intron 30.0%
TGAACACCTTGAATAGAAAT+GGG - chr3_1:78254538-78254557 Msa0377650:intron 30.0%
!!! TACATATACCAGTTTTGTTG+TGG + chr3_1:78254786-78254805 None:intergenic 30.0%
!! CTCTTCTATTTGTTTTCTCT+TGG + chr3_1:78255150-78255169 None:intergenic 30.0%
CAAGAGAAAACAAATAGAAG+AGG - chr3_1:78255148-78255167 Msa0377650:five_prime_UTR 30.0%
CCTCAAATATATATCGAGTT+CGG - chr3_1:78255311-78255330 Msa0377650:five_prime_UTR 30.0%
! CTGACAATTAATGGGAGTAT+TGG - chr3_1:78250043-78250062 Msa0377650:CDS 35.0%
!!! CTCTCTGTTTTTAAGTAACC+GGG - chr3_1:78250148-78250167 Msa0377650:CDS 35.0%
! TATGAACTTGTGTTGATCAG+AGG - chr3_1:78250381-78250400 Msa0377650:intron 35.0%
AGAGGCTAAATTCTTGTGAT+TGG - chr3_1:78250399-78250418 Msa0377650:intron 35.0%
!! TGTTTATTTGGTTTGGAGCT+AGG - chr3_1:78250576-78250595 Msa0377650:CDS 35.0%
!! GTTTATTTGGTTTGGAGCTA+GGG - chr3_1:78250577-78250596 Msa0377650:CDS 35.0%
TTACACGAACTCTTGTAGAA+TGG - chr3_1:78250974-78250993 Msa0377650:CDS 35.0%
TACACGAACTCTTGTAGAAT+GGG - chr3_1:78250975-78250994 Msa0377650:CDS 35.0%
TAGGGGTTAATATCAAGGAT+GGG + chr3_1:78251039-78251058 None:intergenic 35.0%
ATAGGGGTTAATATCAAGGA+TGG + chr3_1:78251040-78251059 None:intergenic 35.0%
TGAGATAGGGGTTAATATCA+AGG + chr3_1:78251044-78251063 None:intergenic 35.0%
! AGAGTGATGAAGTACTAACA+AGG + chr3_1:78251294-78251313 None:intergenic 35.0%
!!! GTTGTTTTGGTTTTGTTTGC+AGG - chr3_1:78251375-78251394 Msa0377650:intron 35.0%
!!! GGATATCTGAGTTTTGAGAT+TGG - chr3_1:78251396-78251415 Msa0377650:intron 35.0%
!! TCAACCAAATGTTGTTTCTG+AGG - chr3_1:78251543-78251562 Msa0377650:CDS 35.0%
! TATTTTCTGCTCAAGGTATG+AGG + chr3_1:78251855-78251874 None:intergenic 35.0%
TACAAAGTTTAGGCTGACAT+GGG + chr3_1:78251943-78251962 None:intergenic 35.0%
TTTGCACCTTTACAAGGTAT+GGG + chr3_1:78252013-78252032 None:intergenic 35.0%
ATTTGCACCTTTACAAGGTA+TGG + chr3_1:78252014-78252033 None:intergenic 35.0%
!! TTAAGGTGCCGAAAACAAAT+TGG - chr3_1:78252258-78252277 Msa0377650:intron 35.0%
TCATGTGTATACCATTACAG+TGG - chr3_1:78252286-78252305 Msa0377650:intron 35.0%
!! ATCTTTTATGGGTTAACTGC+AGG - chr3_1:78252328-78252347 Msa0377650:intron 35.0%
!!! CTGGAAGATAGGTTTTTAGT+GGG + chr3_1:78252373-78252392 None:intergenic 35.0%
!! TCTGGAAGATAGGTTTTTAG+TGG + chr3_1:78252374-78252393 None:intergenic 35.0%
CTAAAAACCTATCTTCCAGA+TGG - chr3_1:78252374-78252393 Msa0377650:intron 35.0%
AATATCTCCATCTGGAAGAT+AGG + chr3_1:78252384-78252403 None:intergenic 35.0%
GTATGCAATCTACTTGAAAG+TGG - chr3_1:78252455-78252474 Msa0377650:CDS 35.0%
! TGTCTTTTACTTGGTACTCA+TGG + chr3_1:78252487-78252506 None:intergenic 35.0%
!! GAAACACTCCTTTTTCACAT+AGG + chr3_1:78252758-78252777 None:intergenic 35.0%
! TTTTTCTCGGTTTTCCTGAT+TGG - chr3_1:78252819-78252838 Msa0377650:intron 35.0%
TGACATCTCCTTTAATCAGA+TGG - chr3_1:78252963-78252982 Msa0377650:CDS 35.0%
GTAGAACTAATGTGGTTAGT+TGG - chr3_1:78253161-78253180 Msa0377650:intron 35.0%
TGTAAATGGGAATCCTAACA+CGG + chr3_1:78253221-78253240 None:intergenic 35.0%
TAGAAACTGTAGGAATGGAA+GGG + chr3_1:78253335-78253354 None:intergenic 35.0%
AGTAGTAGAAACTGTAGGAA+TGG + chr3_1:78253340-78253359 None:intergenic 35.0%
AGTCAAGTAGTAGAAACTGT+AGG + chr3_1:78253345-78253364 None:intergenic 35.0%
ATTCAGTCAGATTGTTGCAA+TGG - chr3_1:78253439-78253458 Msa0377650:intron 35.0%
! TGGAAAAAGAGAGCATAAAG+AGG + chr3_1:78253499-78253518 None:intergenic 35.0%
AAAATGTCCTGCTCATATTC+AGG - chr3_1:78253534-78253553 Msa0377650:intron 35.0%
GTATAATCTTAGTCAAAGCC+TGG - chr3_1:78253637-78253656 Msa0377650:intron 35.0%
TATTATGAGAGCCGAATTCT+TGG - chr3_1:78253663-78253682 Msa0377650:intron 35.0%
!! CTTACCAACAATTTCTGGTA+GGG + chr3_1:78253965-78253984 None:intergenic 35.0%
!! ACTTACCAACAATTTCTGGT+AGG + chr3_1:78253966-78253985 None:intergenic 35.0%
TACTTGATGGAAAATTCACG+AGG + chr3_1:78254179-78254198 None:intergenic 35.0%
AATTACCTTTGTTGACACTG+CGG + chr3_1:78254244-78254263 None:intergenic 35.0%
! AGATGTGGTTTTCACTAAGT+TGG + chr3_1:78254332-78254351 None:intergenic 35.0%
GTCACTAGCAATTAAAGATG+TGG + chr3_1:78254347-78254366 None:intergenic 35.0%
ACCTTGAATAGAAATGGGAA+AGG - chr3_1:78254543-78254562 Msa0377650:intron 35.0%
TCCTTTCCCATTTCTATTCA+AGG + chr3_1:78254547-78254566 None:intergenic 35.0%
ATAGAAATGGGAAAGGACAA+AGG - chr3_1:78254550-78254569 Msa0377650:intron 35.0%
GGAATAGGAACATCAATATC+AGG + chr3_1:78254576-78254595 None:intergenic 35.0%
AGCATATCAGCATCAAATTG+TGG + chr3_1:78254732-78254751 None:intergenic 35.0%
AGCATATCAGCATCAAATTG+CGG + chr3_1:78254732-78254751 None:intergenic 35.0%
ATTTCTTCAAGGCCATAAGT+TGG + chr3_1:78254876-78254895 None:intergenic 35.0%
! ACTTATGGCCTTGAAGAAAT+AGG - chr3_1:78254876-78254895 Msa0377650:intron 35.0%
! CTTATGGCCTTGAAGAAATA+GGG - chr3_1:78254877-78254896 Msa0377650:intron 35.0%
CAAAAGCAATTTACCATGTC+AGG + chr3_1:78254930-78254949 None:intergenic 35.0%
ATTATTATTATTCGCACGGC+TGG + chr3_1:78255081-78255100 None:intergenic 35.0%
TTTCCTGTTCTTTCAAGCAT+TGG - chr3_1:78255233-78255252 Msa0377650:five_prime_UTR 35.0%
CCGAACTCGATATATATTTG+AGG + chr3_1:78255314-78255333 None:intergenic 35.0%
AAGGATCAGAAAAAGGATTC+TGG - chr3_1:78255380-78255399 Msa0377650:five_prime_UTR 35.0%
!! TGTTTCATCCTCTAAGACAT+TGG - chr3_1:78255403-78255422 Msa0377650:five_prime_UTR 35.0%
!! GTTTCATCCTCTAAGACATT+GGG - chr3_1:78255404-78255423 Msa0377650:five_prime_UTR 35.0%
! GTAGTGTTATTGGCAGCAAT+GGG + chr3_1:78249924-78249943 None:intergenic 40.0%
! TGTAGTGTTATTGGCAGCAA+TGG + chr3_1:78249925-78249944 None:intergenic 40.0%
!!! ACCTTGGCTGAAACCTTTTT+TGG - chr3_1:78250321-78250340 Msa0377650:intron 40.0%
ACCAAAAAAGGTTTCAGCCA+AGG + chr3_1:78250325-78250344 None:intergenic 40.0%
TACAAAACAGGTATAGGCAC+AGG + chr3_1:78250695-78250714 None:intergenic 40.0%
TCCAGCTACAAAACAGGTAT+AGG + chr3_1:78250701-78250720 None:intergenic 40.0%
TATTTCCAGAACAAACACGC+TGG + chr3_1:78251015-78251034 None:intergenic 40.0%
!! TGTGTCGGTTCAGTGTTAAA+TGG - chr3_1:78251184-78251203 Msa0377650:intron 40.0%
!! TCAGTGTTGATGTCAGTGTT+TGG - chr3_1:78251255-78251274 Msa0377650:CDS 40.0%
!!! AGTTTTGAGATTGGCAGCAA+TGG - chr3_1:78251405-78251424 Msa0377650:intron 40.0%
!!! GTTTTGAGATTGGCAGCAAT+GGG - chr3_1:78251406-78251425 Msa0377650:intron 40.0%
! TGTTGGTTAAGCAAGGAGTA+TGG + chr3_1:78251454-78251473 None:intergenic 40.0%
TAACCAACAGCTGTTCTCAA+TGG - chr3_1:78251465-78251484 Msa0377650:intron 40.0%
! TTTGGTTTATGGCTGAAGAG+AGG - chr3_1:78251497-78251516 Msa0377650:CDS 40.0%
TTGGTTTATGGCTGAAGAGA+GGG - chr3_1:78251498-78251517 Msa0377650:CDS 40.0%
AATTGTGCATAGTACTTCCC+GGG + chr3_1:78251524-78251543 None:intergenic 40.0%
GAATTGTGCATAGTACTTCC+CGG + chr3_1:78251525-78251544 None:intergenic 40.0%
TTCGCCTCAGAAACAACATT+TGG + chr3_1:78251550-78251569 None:intergenic 40.0%
! GATTTTGTTCAGAGGCTGAT+TGG - chr3_1:78251586-78251605 Msa0377650:intron 40.0%
!! GTAGGAGTGGGTTATGTATT+TGG - chr3_1:78251675-78251694 Msa0377650:intron 40.0%
! CAAAGTTGCTTTCTTTCCCA+TGG - chr3_1:78251715-78251734 Msa0377650:CDS 40.0%
TGCTTTCTTTCCCATGGATT+TGG - chr3_1:78251721-78251740 Msa0377650:CDS 40.0%
! TTCTTTCCCATGGATTTGGT+TGG - chr3_1:78251725-78251744 Msa0377650:CDS 40.0%
! TCTTTCCCATGGATTTGGTT+GGG - chr3_1:78251726-78251745 Msa0377650:CDS 40.0%
AAACACCCAACCAAATCCAT+GGG + chr3_1:78251734-78251753 None:intergenic 40.0%
AAAACACCCAACCAAATCCA+TGG + chr3_1:78251735-78251754 None:intergenic 40.0%
TGACATGGGACAATATTTGC+TGG + chr3_1:78251929-78251948 None:intergenic 40.0%
CTACAAAGTTTAGGCTGACA+TGG + chr3_1:78251944-78251963 None:intergenic 40.0%
TATTACGGACACCACTGTAA+TGG + chr3_1:78252300-78252319 None:intergenic 40.0%
TAACTGCAGGTATTCGTGTT+TGG - chr3_1:78252341-78252360 Msa0377650:intron 40.0%
GTCAAGTCAATATCTCCATC+TGG + chr3_1:78252392-78252411 None:intergenic 40.0%
CAATCTACTTGAAAGTGGAG+AGG - chr3_1:78252460-78252479 Msa0377650:CDS 40.0%
AAGTAAAGCGATAACTGCAG+TGG + chr3_1:78252780-78252799 None:intergenic 40.0%
ATCTCCTTTAATCAGATGGC+TGG - chr3_1:78252967-78252986 Msa0377650:CDS 40.0%
ACAAACTAACAGGAACACGA+GGG + chr3_1:78253108-78253127 None:intergenic 40.0%
TACAAACTAACAGGAACACG+AGG + chr3_1:78253109-78253128 None:intergenic 40.0%
AGAAACTGTAGGAATGGAAG+GGG + chr3_1:78253334-78253353 None:intergenic 40.0%
GTAGAAACTGTAGGAATGGA+AGG + chr3_1:78253336-78253355 None:intergenic 40.0%
GCAACAATCTGACTGAATAG+AGG + chr3_1:78253437-78253456 None:intergenic 40.0%
! TGTTTTCATTCATCAGTGCG+CGG - chr3_1:78253747-78253766 Msa0377650:intron 40.0%
AAGACATAACTCACCTCTAG+AGG + chr3_1:78253774-78253793 None:intergenic 40.0%
ACTACTACAGCACATTTGAC+TGG - chr3_1:78253896-78253915 Msa0377650:CDS 40.0%
CTACTACAGCACATTTGACT+GGG - chr3_1:78253897-78253916 Msa0377650:CDS 40.0%
TAAGGCTTGTGGACCATATA+TGG + chr3_1:78253938-78253957 None:intergenic 40.0%
!! AATTTCTGGTAGGGAGGATA+AGG + chr3_1:78253956-78253975 None:intergenic 40.0%
! GGATATGTGCTTTGTTCCAA+AGG - chr3_1:78254139-78254158 Msa0377650:intron 40.0%
ATTCGATGTAAATTGCCTGC+AGG + chr3_1:78254426-78254445 None:intergenic 40.0%
GCAGGCAATTTACATCGAAT+TGG - chr3_1:78254426-78254445 Msa0377650:intron 40.0%
ATCGAATTGGATTCGCTCTT+AGG - chr3_1:78254439-78254458 Msa0377650:intron 40.0%
ATTGGATTCGCTCTTAGGTT+TGG - chr3_1:78254444-78254463 Msa0377650:intron 40.0%
TTCTTTGTCCTGGAAGCTTA+AGG + chr3_1:78254491-78254510 None:intergenic 40.0%
TAAGCTTCCAGGACAAAGAA+TGG - chr3_1:78254491-78254510 Msa0377650:intron 40.0%
AAGCTTCCAGGACAAAGAAT+GGG - chr3_1:78254492-78254511 Msa0377650:intron 40.0%
GATGTTCCTATTCCTGCATT+TGG - chr3_1:78254582-78254601 Msa0377650:intron 40.0%
! GATTTTCCAGTACCAAATGC+AGG + chr3_1:78254597-78254616 None:intergenic 40.0%
! GCATCAAATTGTGGTGATGA+GGG + chr3_1:78254723-78254742 None:intergenic 40.0%
! AGCATCAAATTGTGGTGATG+AGG + chr3_1:78254724-78254743 None:intergenic 40.0%
GGATGAAAGAAAGTCTGACT+CGG + chr3_1:78254837-78254856 None:intergenic 40.0%
! GCGATTTCCCTATTTCTTCA+AGG + chr3_1:78254887-78254906 None:intergenic 40.0%
TCATCATTCATGTCAGTCTC+GGG + chr3_1:78255179-78255198 None:intergenic 40.0%
CTCATCATTCATGTCAGTCT+CGG + chr3_1:78255180-78255199 None:intergenic 40.0%
! ATCTTCCTTTGAGAGCTCAA+AGG + chr3_1:78255213-78255232 None:intergenic 40.0%
TTGCCAATGCTTGAAAGAAC+AGG + chr3_1:78255239-78255258 None:intergenic 40.0%
! TTTGAGGCGATGAAGAATTC+TGG + chr3_1:78255298-78255317 None:intergenic 40.0%
ATCCCTGAAAGAACTGAGTT+TGG - chr3_1:78255352-78255371 Msa0377650:five_prime_UTR 40.0%
TCCCTGAAAGAACTGAGTTT+GGG - chr3_1:78255353-78255372 Msa0377650:five_prime_UTR 40.0%
TCCCAAACTCAGTTCTTTCA+GGG + chr3_1:78255357-78255376 None:intergenic 40.0%
TTCCCAAACTCAGTTCTTTC+AGG + chr3_1:78255358-78255377 None:intergenic 40.0%
AGAACTGAGTTTGGGAACAA+AGG - chr3_1:78255361-78255380 Msa0377650:five_prime_UTR 40.0%
GGGAACAAAGGATCAGAAAA+AGG - chr3_1:78255373-78255392 Msa0377650:five_prime_UTR 40.0%
CTTTGTTCCCAATGTCTTAG+AGG + chr3_1:78255414-78255433 None:intergenic 40.0%
!! CTCTAAGACATTGGGAACAA+AGG - chr3_1:78255412-78255431 Msa0377650:five_prime_UTR 40.0%
AGACATTGGGAACAAAGGAT+CGG - chr3_1:78255417-78255436 Msa0377650:five_prime_UTR 40.0%
AAGGATCGGAAAAAGGATTC+CGG - chr3_1:78255431-78255450 Msa0377650:five_prime_UTR 40.0%
GAATGGTAATCTGGTGGAAG+CGG + chr3_1:78250275-78250294 None:intergenic 45.0%
CTTCCACCAGATTACCATTC+CGG - chr3_1:78250275-78250294 Msa0377650:intron 45.0%
GATCACGATTCTGTCTACCT+TGG - chr3_1:78250305-78250324 Msa0377650:intron 45.0%
! GCCTATACCTGTTTTGTAGC+TGG - chr3_1:78250697-78250716 Msa0377650:CDS 45.0%
ACAACTTGAGTGAGGTTGTG+AGG + chr3_1:78251076-78251095 None:intergenic 45.0%
GTATGCTCACAACTTGAGTG+AGG + chr3_1:78251084-78251103 None:intergenic 45.0%
ACAAATTCGAGCTGAAGGGT+TGG + chr3_1:78251149-78251168 None:intergenic 45.0%
GGACACAAATTCGAGCTGAA+GGG + chr3_1:78251153-78251172 None:intergenic 45.0%
CTTCAGCTCGAATTTGTGTC+CGG - chr3_1:78251152-78251171 Msa0377650:intron 45.0%
AACACTGAACCGACACAAGT+AGG + chr3_1:78251181-78251200 None:intergenic 45.0%
! GAACAGCTGTTGGTTAAGCA+AGG + chr3_1:78251461-78251480 None:intergenic 45.0%
CATCCATTGAGAACAGCTGT+TGG + chr3_1:78251471-78251490 None:intergenic 45.0%
ACAGCTGTTCTCAATGGATG+AGG - chr3_1:78251471-78251490 Msa0377650:intron 45.0%
TCTCAATGGATGAGGAGCTT+TGG - chr3_1:78251479-78251498 Msa0377650:intron 45.0%
! GGATGAGGAGCTTTGGTTTA+TGG - chr3_1:78251486-78251505 Msa0377650:CDS 45.0%
!! TTTCTGAGGCGAACAGAAAG+AGG - chr3_1:78251557-78251576 Msa0377650:CDS 45.0%
TTTGTTCAGAGGCTGATTGG+AGG - chr3_1:78251589-78251608 Msa0377650:intron 45.0%
AGGCTGATTGGAGGTTACTA+TGG - chr3_1:78251598-78251617 Msa0377650:intron 45.0%
GGCTGATTGGAGGTTACTAT+GGG - chr3_1:78251599-78251618 Msa0377650:intron 45.0%
GCTGATTGGAGGTTACTATG+GGG - chr3_1:78251600-78251619 Msa0377650:intron 45.0%
CTGATTGGAGGTTACTATGG+GGG - chr3_1:78251601-78251620 Msa0377650:intron 45.0%
ACCTTCGATTGTTGTAGGAG+TGG - chr3_1:78251662-78251681 Msa0377650:intron 45.0%
CCTTCGATTGTTGTAGGAGT+GGG - chr3_1:78251663-78251682 Msa0377650:intron 45.0%
GAAGTGCATGGTGTAAAGGA+AGG + chr3_1:78251833-78251852 None:intergenic 45.0%
! TGAGGAAGTGCATGGTGTAA+AGG + chr3_1:78251837-78251856 None:intergenic 45.0%
! TCAAGGTATGAGGAAGTGCA+TGG + chr3_1:78251845-78251864 None:intergenic 45.0%
CACCTTTACAAGGTATGGGA+GGG + chr3_1:78252009-78252028 None:intergenic 45.0%
CATACAACAAATACGTGCGC+AGG - chr3_1:78252505-78252524 Msa0377650:CDS 45.0%
ATGTTTGGCAATTGGACTGC+AGG - chr3_1:78252903-78252922 Msa0377650:intron 45.0%
GAGTCCAGCCATCTGATTAA+AGG + chr3_1:78252974-78252993 None:intergenic 45.0%
AGCAAAGCCTGAATATGAGC+AGG + chr3_1:78253544-78253563 None:intergenic 45.0%
!! TCTCAGGTTGACCAACTTGT+CGG - chr3_1:78253591-78253610 Msa0377650:intron 45.0%
! CATGGTTTTTCCCGACAAGT+TGG + chr3_1:78253605-78253624 None:intergenic 45.0%
CATGGTGTGCACCAAGAATT+CGG + chr3_1:78253677-78253696 None:intergenic 45.0%
CAACTGCATATGTTGAGAGC+AGG + chr3_1:78253701-78253720 None:intergenic 45.0%
ACCTGCTAGTAGCAGTAGTT+CGG + chr3_1:78253859-78253878 None:intergenic 45.0%
!! GCAGGTGCTGTACAGATTTT+TGG - chr3_1:78253873-78253892 Msa0377650:CDS 45.0%
TCCTCCCTACCAGAAATTGT+TGG - chr3_1:78253958-78253977 Msa0377650:CDS 45.0%
!! ACCAACAATTTCTGGTAGGG+AGG + chr3_1:78253962-78253981 None:intergenic 45.0%
AATGGGGCTGCATAAGTCAT+TGG - chr3_1:78253989-78254008 Msa0377650:CDS 45.0%
GCAGAGAAATCAGAATGCGA+TGG - chr3_1:78254074-78254093 Msa0377650:intron 45.0%
GAGAAATCAGAATGCGATGG+AGG - chr3_1:78254077-78254096 Msa0377650:intron 45.0%
AAATTCACGAGGCGAAGTCT+CGG + chr3_1:78254168-78254187 None:intergenic 45.0%
TTGCTAGTGACAAATGCGTC+TGG - chr3_1:78254356-78254375 Msa0377650:intron 45.0%
TGCTAGTGACAAATGCGTCT+GGG - chr3_1:78254357-78254376 Msa0377650:intron 45.0%
! ACCTTTTACCTTTGTCCTGC+AGG - chr3_1:78254408-78254427 Msa0377650:intron 45.0%
GTAAATTGCCTGCAGGACAA+AGG + chr3_1:78254419-78254438 None:intergenic 45.0%
!! GTTTGGTGCTCGAAAGCTTA+AGG - chr3_1:78254461-78254480 Msa0377650:intron 45.0%
AAGGAGATCCTTAAGCTTCC+AGG - chr3_1:78254480-78254499 Msa0377650:intron 45.0%
CCAGTACCAAATGCAGGAAT+AGG + chr3_1:78254591-78254610 None:intergenic 45.0%
CCTATTCCTGCATTTGGTAC+TGG - chr3_1:78254588-78254607 Msa0377650:intron 45.0%
AACTGTCACAGTCTCCAACA+AGG + chr3_1:78254632-78254651 None:intergenic 45.0%
GGAGACTGTGACAGTTACTA+TGG - chr3_1:78254636-78254655 Msa0377650:intron 45.0%
GACTGTGACAGTTACTATGG+CGG - chr3_1:78254639-78254658 Msa0377650:intron 45.0%
! AATTGTGGTGATGAGGGACT+GGG + chr3_1:78254717-78254736 None:intergenic 45.0%
! AAATTGTGGTGATGAGGGAC+TGG + chr3_1:78254718-78254737 None:intergenic 45.0%
TGCTTGCACCACAACAAAAC+TGG - chr3_1:78254775-78254794 Msa0377650:intron 45.0%
GAAGAAATAGGGAAATCGCG+AGG - chr3_1:78254888-78254907 Msa0377650:intron 45.0%
AGGGACTTACATACCTGACA+TGG - chr3_1:78254914-78254933 Msa0377650:intron 45.0%
CTCAGACTCTTACTACCTAC+TGG - chr3_1:78255021-78255040 Msa0377650:intron 45.0%
! CTTTGAGAGCTCAAAGGACT+TGG + chr3_1:78255207-78255226 None:intergenic 45.0%
CAAGTCCTTTGAGCTCTCAA+AGG - chr3_1:78255205-78255224 Msa0377650:five_prime_UTR 45.0%
AGCATCTCATCAATCTGAGC+AGG - chr3_1:78255271-78255290 Msa0377650:five_prime_UTR 45.0%
GGGAACAAAGGATCGGAAAA+AGG - chr3_1:78255424-78255443 Msa0377650:five_prime_UTR 45.0%
CTACACCAGTTGTTCCAAGT+CGG - chr3_1:78255477-78255496 Msa0377650:five_prime_UTR 45.0%
TACACCAGTTGTTCCAAGTC+GGG - chr3_1:78255478-78255497 Msa0377650:five_prime_UTR 45.0%
! AGGCAAAGGAGAAGTGTACT+CGG - chr3_1:78255507-78255526 Msa0377650:five_prime_UTR 45.0%
! AAAGGAGAAGTGTACTCGGA+TGG - chr3_1:78255511-78255530 Msa0377650:five_prime_UTR 45.0%
TACTCGGATGGAGAAGAAGA+TGG - chr3_1:78255523-78255542 Msa0377650:five_prime_UTR 45.0%
ACTCGGATGGAGAAGAAGAT+GGG - chr3_1:78255524-78255543 Msa0377650:five_prime_UTR 45.0%
!! TATAAAAATTTAATGTAAAT+GGG + chr3_1:78253234-78253253 None:intergenic 5.0%
!! ATATAAAAATTTAATGTAAA+TGG + chr3_1:78253235-78253254 None:intergenic 5.0%
!!! ATTTTTTTAAAAAAATTCAA+TGG + chr3_1:78253519-78253538 None:intergenic 5.0%
ACAATTCCGGGTTCGTGTGT+CGG + chr3_1:78250182-78250201 None:intergenic 50.0%
TGCGTCTTCCTCACAATTCC+GGG + chr3_1:78250194-78250213 None:intergenic 50.0%
GTGCGTCTTCCTCACAATTC+CGG + chr3_1:78250195-78250214 None:intergenic 50.0%
GTGAGGAAGACGCACAGAAT+CGG - chr3_1:78250200-78250219 Msa0377650:CDS 50.0%
AACTCGCCGGAATGGTAATC+TGG + chr3_1:78250284-78250303 None:intergenic 50.0%
AGATTACCATTCCGGCGAGT+TGG - chr3_1:78250283-78250302 Msa0377650:intron 50.0%
AGAATCGTGATCCAACTCGC+CGG + chr3_1:78250297-78250316 None:intergenic 50.0%
! TGGTTTGGAGCTAGGGTTTC+TGG - chr3_1:78250584-78250603 Msa0377650:CDS 50.0%
CAGCAGTCCAGCTACAAAAC+AGG + chr3_1:78250707-78250726 None:intergenic 50.0%
! CTGTTTTGTAGCTGGACTGC+TGG - chr3_1:78250705-78250724 Msa0377650:CDS 50.0%
GTGATCCAGCGTGTTTGTTC+TGG - chr3_1:78251007-78251026 Msa0377650:CDS 50.0%
AGGTGGAGCAACTGAGATAG+GGG + chr3_1:78251056-78251075 None:intergenic 50.0%
GAGGTGGAGCAACTGAGATA+GGG + chr3_1:78251057-78251076 None:intergenic 50.0%
TGAGGTGGAGCAACTGAGAT+AGG + chr3_1:78251058-78251077 None:intergenic 50.0%
ACTTGAGTGAGGTTGTGAGG+TGG + chr3_1:78251073-78251092 None:intergenic 50.0%
CGGACACAAATTCGAGCTGA+AGG + chr3_1:78251154-78251173 None:intergenic 50.0%
AACCGACACAAGTAGGACAC+CGG + chr3_1:78251174-78251193 None:intergenic 50.0%
CCCACTCCTACAACAATCGA+AGG + chr3_1:78251666-78251685 None:intergenic 50.0%
CTTTACAAGGTATGGGAGGG+AGG + chr3_1:78252006-78252025 None:intergenic 50.0%
CTCCCTCCCATACCTTGTAA+AGG - chr3_1:78252004-78252023 Msa0377650:intron 50.0%
GCACCTTTACAAGGTATGGG+AGG + chr3_1:78252010-78252029 None:intergenic 50.0%
TGGCAATTGGACTGCAGGTA+AGG - chr3_1:78252908-78252927 Msa0377650:intron 50.0%
GGCAATTGGACTGCAGGTAA+GGG - chr3_1:78252909-78252928 Msa0377650:intron 50.0%
ACTCTATGCTCTGCGCTTTC+TGG - chr3_1:78252990-78253009 Msa0377650:CDS 50.0%
TGTAGGAATGGAAGGGGAAG+GGG + chr3_1:78253328-78253347 None:intergenic 50.0%
CTGTAGGAATGGAAGGGGAA+GGG + chr3_1:78253329-78253348 None:intergenic 50.0%
ACTGTAGGAATGGAAGGGGA+AGG + chr3_1:78253330-78253349 None:intergenic 50.0%
!! CTCAGGTTGACCAACTTGTC+GGG - chr3_1:78253592-78253611 Msa0377650:intron 50.0%
TCGGCTCTCATAATAGCACC+AGG + chr3_1:78253658-78253677 None:intergenic 50.0%
! CGAATTCTTGGTGCACACCA+TGG - chr3_1:78253675-78253694 Msa0377650:intron 50.0%
CATATGTTGAGAGCAGGCCA+TGG + chr3_1:78253695-78253714 None:intergenic 50.0%
TGCTAGTAGCAGTAGTTCGG+TGG + chr3_1:78253856-78253875 None:intergenic 50.0%
ACCGAACTACTGCTACTAGC+AGG - chr3_1:78253855-78253874 Msa0377650:CDS 50.0%
!! CGACAAGCAGGTTGGTATCA+AGG + chr3_1:78254055-78254074 None:intergenic 50.0%
TTTCTCTGCGACAAGCAGGT+TGG + chr3_1:78254063-78254082 None:intergenic 50.0%
CTGATTTCTCTGCGACAAGC+AGG + chr3_1:78254067-78254086 None:intergenic 50.0%
GCCTGCAGGACAAAGGTAAA+AGG + chr3_1:78254412-78254431 None:intergenic 50.0%
CTTCCAGGACAAAGAATGGG+TGG - chr3_1:78254495-78254514 Msa0377650:intron 50.0%
! AAGAATGGGTGGAGCACTTG+AGG - chr3_1:78254506-78254525 Msa0377650:intron 50.0%
TCTGAAGAGCCTGTCCTTGT+TGG - chr3_1:78254615-78254634 Msa0377650:intron 50.0%
TCACAGTCTCCAACAAGGAC+AGG + chr3_1:78254627-78254646 None:intergenic 50.0%
GTTGGCTGTGGAGGAACATT+CGG + chr3_1:78254858-78254877 None:intergenic 50.0%
GTTCCTCCACAGCCAACTTA+TGG - chr3_1:78254861-78254880 Msa0377650:intron 50.0%
! TCAAGGCCATAAGTTGGCTG+TGG + chr3_1:78254870-78254889 None:intergenic 50.0%
TCATTCATGTCAGTCTCGGG+AGG + chr3_1:78255176-78255195 None:intergenic 50.0%
GATCGGAAAAAGGATTCCGG+TGG - chr3_1:78255434-78255453 Msa0377650:five_prime_UTR 50.0%
TCCGGTGGTTCATCCTCTAA+AGG - chr3_1:78255449-78255468 Msa0377650:five_prime_UTR 50.0%
! GCCTTTAGAGGATGAACCAC+CGG + chr3_1:78255453-78255472 None:intergenic 50.0%
TGGTGTAGTAGCGCCTTTAG+AGG + chr3_1:78255465-78255484 None:intergenic 50.0%
!! AATGCCCGACTTGGAACAAC+TGG + chr3_1:78255485-78255504 None:intergenic 50.0%
CAATTCCGGGTTCGTGTGTC+GGG + chr3_1:78250181-78250200 None:intergenic 55.0%
CACACGAACCCGGAATTGTG+AGG - chr3_1:78250183-78250202 Msa0377650:CDS 55.0%
AACGGTGGAATCGAGCGTCT+CGG + chr3_1:78250226-78250245 None:intergenic 55.0%
! ACCGTTCCCACTCGTTTTCG+CGG - chr3_1:78250240-78250259 Msa0377650:intron 55.0%
GAATCGCCGCGAAAACGAGT+GGG + chr3_1:78250249-78250268 None:intergenic 55.0%
! ACTCGTTTTCGCGGCGATTC+CGG - chr3_1:78250249-78250268 Msa0377650:intron 55.0%
TCGCCGGAATGGTAATCTGG+TGG + chr3_1:78250281-78250300 None:intergenic 55.0%
GTCCGGTGTCCTACTTGTGT+CGG - chr3_1:78251169-78251188 Msa0377650:intron 55.0%
TTATGGCTGAAGAGAGGGCC+CGG - chr3_1:78251503-78251522 Msa0377650:CDS 55.0%
TGGAGGTTACTATGGGGGAG+AGG - chr3_1:78251606-78251625 Msa0377650:intron 55.0%
TACAAGGTATGGGAGGGAGG+TGG + chr3_1:78252003-78252022 None:intergenic 55.0%
GGTAGGGAGGATAAGGCTTG+TGG + chr3_1:78253949-78253968 None:intergenic 55.0%
CTTTGTTGACACTGCGGCCT+AGG + chr3_1:78254238-78254257 None:intergenic 55.0%
CTAGGCCGCAGTGTCAACAA+AGG - chr3_1:78254236-78254255 Msa0377650:intron 55.0%
GTGACAAATGCGTCTGGGCT+TGG - chr3_1:78254362-78254381 Msa0377650:intron 55.0%
GCTCCACCCATTCTTTGTCC+TGG + chr3_1:78254501-78254520 None:intergenic 55.0%
! AGGCCATAAGTTGGCTGTGG+AGG + chr3_1:78254867-78254886 None:intergenic 55.0%
TTGGCATGGACCCTCTTGCA+CGG + chr3_1:78255052-78255071 None:intergenic 55.0%
! TGTTCCAAGTCGGGCATTGC+AGG - chr3_1:78255487-78255506 Msa0377650:five_prime_UTR 55.0%
TTTGCCTGCAATGCCCGACT+TGG + chr3_1:78255494-78255513 None:intergenic 55.0%
! AAGTCGGGCATTGCAGGCAA+AGG - chr3_1:78255493-78255512 Msa0377650:five_prime_UTR 55.0%
GCGAAAACGAGTGGGAACGG+TGG + chr3_1:78250241-78250260 None:intergenic 60.0%
GCCGCGAAAACGAGTGGGAA+CGG + chr3_1:78250244-78250263 None:intergenic 60.0%
GGAATCGCCGCGAAAACGAG+TGG + chr3_1:78250250-78250269 None:intergenic 60.0%
GGTAATCTGGTGGAAGCGGC+CGG + chr3_1:78250271-78250290 None:intergenic 60.0%
CGTGATCCAACTCGCCGGAA+TGG + chr3_1:78250292-78250311 None:intergenic 60.0%
TATGGCTGAAGAGAGGGCCC+GGG - chr3_1:78251504-78251523 Msa0377650:CDS 60.0%
TATGGGAGGGAGGTGGTTGG+GGG + chr3_1:78251996-78252015 None:intergenic 60.0%
GTATGGGAGGGAGGTGGTTG+GGG + chr3_1:78251997-78252016 None:intergenic 60.0%
GGTATGGGAGGGAGGTGGTT+GGG + chr3_1:78251998-78252017 None:intergenic 60.0%
AGGTATGGGAGGGAGGTGGT+TGG + chr3_1:78251999-78252018 None:intergenic 60.0%
!! TGCTCTGCGCTTTCTGGAGC+AGG - chr3_1:78252996-78253015 Msa0377650:CDS 60.0%
ATCAGTGCGCGGTCCTCTAG+AGG - chr3_1:78253758-78253777 Msa0377650:intron 60.0%
GGCGAAGTCTCGGATGCCTT+TGG + chr3_1:78254158-78254177 None:intergenic 60.0%
TCTTGCACGGGCGTTCCAGT+AGG + chr3_1:78255039-78255058 None:intergenic 60.0%
TACTGGAACGCCCGTGCAAG+AGG - chr3_1:78255038-78255057 Msa0377650:intron 60.0%
ACTGGAACGCCCGTGCAAGA+GGG - chr3_1:78255039-78255058 Msa0377650:intron 60.0%
TGGCATGGACCCTCTTGCAC+GGG + chr3_1:78255051-78255070 None:intergenic 60.0%
GTGCAAGAGGGTCCATGCCA+AGG - chr3_1:78255051-78255070 Msa0377650:intron 60.0%
ACGGCTGGATCTCCTTGGCA+TGG + chr3_1:78255066-78255085 None:intergenic 60.0%
TTCGCACGGCTGGATCTCCT+TGG + chr3_1:78255071-78255090 None:intergenic 60.0%
GCCAACCCGACACACGAACC+CGG - chr3_1:78250173-78250192 Msa0377650:CDS 65.0%
TCCGGGTTCGTGTGTCGGGT+TGG + chr3_1:78250177-78250196 None:intergenic 65.0%
GGGAGGTGGTTGGGGGCTTT+AGG + chr3_1:78251989-78252008 None:intergenic 65.0%
GGACTGGGCTGTGCAACGAG+CGG + chr3_1:78254702-78254721 None:intergenic 65.0%
!! CGTGTGTCGGGTTGGCGACC+CGG + chr3_1:78250169-78250188 None:intergenic 70.0%
GGGCTGTGCAACGAGCGGCA+TGG + chr3_1:78254697-78254716 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 78249913 78255550 78249913 ID=Msa0377650;Name=Msa0377650
chr3_1 mRNA 78249913 78255550 78249913 ID=Msa0377650-mRNA-1;Parent=Msa0377650;Name=Msa0377650-mRNA-1;_AED=0.33;_eAED=0.33;_QI=466|0.87|0.88|1|0.87|0.77|9|0|595
chr3_1 exon 78249913 78250254 78249913 ID=Msa0377650-mRNA-1:exon:18815;Parent=Msa0377650-mRNA-1
chr3_1 exon 78250528 78251033 78250528 ID=Msa0377650-mRNA-1:exon:18814;Parent=Msa0377650-mRNA-1
chr3_1 exon 78251206 78251385 78251206 ID=Msa0377650-mRNA-1:exon:18813;Parent=Msa0377650-mRNA-1
chr3_1 exon 78251484 78251586 78251484 ID=Msa0377650-mRNA-1:exon:18812;Parent=Msa0377650-mRNA-1
chr3_1 exon 78251684 78251866 78251684 ID=Msa0377650-mRNA-1:exon:18811;Parent=Msa0377650-mRNA-1
chr3_1 exon 78252446 78252538 78252446 ID=Msa0377650-mRNA-1:exon:18810;Parent=Msa0377650-mRNA-1
chr3_1 exon 78252937 78253113 78252937 ID=Msa0377650-mRNA-1:exon:18809;Parent=Msa0377650-mRNA-1
chr3_1 exon 78253836 78254066 78253836 ID=Msa0377650-mRNA-1:exon:18808;Parent=Msa0377650-mRNA-1
chr3_1 exon 78255112 78255550 78255112 ID=Msa0377650-mRNA-1:exon:18807;Parent=Msa0377650-mRNA-1
chr3_1 five_prime_UTR 78255112 78255550 78255112 ID=Msa0377650-mRNA-1:five_prime_utr;Parent=Msa0377650-mRNA-1
chr3_1 five_prime_UTR 78254040 78254066 78254040 ID=Msa0377650-mRNA-1:five_prime_utr;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78253836 78254039 78253836 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78252937 78253113 78252937 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78252446 78252538 78252446 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78251684 78251866 78251684 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78251484 78251586 78251484 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78251206 78251385 78251206 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78250528 78251033 78250528 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
chr3_1 CDS 78249913 78250254 78249913 ID=Msa0377650-mRNA-1:cds;Parent=Msa0377650-mRNA-1
Gene Sequence

>Msa0377650

ATGGGTACTATACAACAAAATGTGTTACCATACTCCTTGCTTAACCAACAGCTGTTCTCAATGGATGAGGAGCTTTGGTTTATGGCTGAAGAGAGGGCCCGGGAAGTACTATGCACAATTCAACCAAATGTTGTTTCTGAGGCGAACAGAAAGAGGATTATTGATTTTGTTCAGAGGCTGATTGGAGGTTACTATGGGGGAGAGGTATTCGTGTTTGGATCAGTCCCACTAAAAACCTATCTTCCAGATGGAGATATTGACTTGACAGTTCTCAGTCATGAAAGTGTTGAAGATGATTTGGTACAAGCTGTATGCAATCTACTTGAAAGTGGAGAGGACCATGAGTACCAAGTAAAAGACATACAACAAATACGTGCGCAGGTAAGGGTTGTCAAATGCACAGTGAAAAATATTGCAGTTGACATCTCCTTTAATCAGATGGCTGGACTCTATGCTCTGCGCTTTCTGGAGCAGGTTGACCAACTTGTCGGGAAAAACCATGTCTTCAAACAAAGTATAATCTTAGTCAAAGCCTGGTGCTATTATGAGAGCCGAATTCTTGGTGCACACCATGGCCTGCTCTCAACATATGCAGTTGAAATATTGGTTTTATATATTATCAACTGTTTTCATTCATCAGTGCGCGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCACATTTGACTGGGAGAAGAATTATGTCACCATATATGGTCCACAAGCCTTATCCTCCCTACCAGAAATTGTTGAGAAATCAGAATGCGATGGAGGTGAGTTCTTGCTCAGTAAAGAGCTTCTGAAAAATTACAGGGATATGTGCTTTGTTCCAAAGGCATCCGAGACTTCGCCTCGTGAATTTTCCATCAAGTACATTAACATCTTGGATCCTCTAAAAAATGACAACAACCTAGGCCGCAGTGTCAACAAAGGCAATTTACATCGAATTGGATTCGCTCTTAGGTTTGGTGCTCGAAAGCTTAAGGAGATCCTTAAGCTTCCAGGACAAAGAATGGGTGGAGCACTTGAGGTGTTTTTCATGAACACCTTGAATAGAAATGGGAAAGGACAAAGGCCTGATATTGATGTTCCTATTCCTGCATTTGGTACTGGAAAATCTGAAGAGCCTGTCCTTGTTGGAGACTGTGACAGTTACTATGGCGGCTTAAAATACGTTCAGTTGTATCGTAACTATGCCATGCCGCTCGTTGCACAGCCCAGTCCCTCATCACCACAATTTGATGCTGATATGCTTGCACCGCAATTTGATGCTGATATGCTTGCACCACAACAAAACTGGTATATGTATTATCATAGAGGTGCTGATTTATATGTGCCGAGTCAGACTTTCTTTCATCCGAATGTTCCTCCACAGCCAACTTATGGCCTTGAAGAAATAGGGAAATCGCGAGGAACAGGGACTTACATACCTGACATGTCCTTTGAGCTCTCAAAGGAAGATTTTCCTGTTCTTTCAAGCATTGGCAACAGCAGTTTGTCAGCATCTCATCAATCTGAGCAGGACCAGAATTCTTCATCGCCTCAAATATATATCGAGTTCGGAACTTACAGTGTCTCAAAATCCCTGAAAGAACTGAGTTTGGGAACAAAGGATCAGAAAAAGGATTCTGGTGTTTCATCCTCTAAGACATTGGGAACAAAGGATCGGAAAAAGGATTCCGGTGGTTCATCCTCTAAAGGCGCTACTACACCAGTTGTTCCAAGTCGGGCATTGCAGGCAAAGGAGAAGTGTACTCGGATGGAGAAGAAGATGGGTTGA
Protein sequence

>Msa0377650

MGTIQQNVLPYSLLNQQLFSMDEELWFMAEERAREVLCTIQPNVVSEANRKRIIDFVQRLIGGYYGGEVFVFGSVPLKTYLPDGDIDLTVLSHESVEDDLVQAVCNLLESGEDHEYQVKDIQQIRAQVRVVKCTVKNIAVDISFNQMAGLYALRFLEQVDQLVGKNHVFKQSIILVKAWCYYESRILGAHHGLLSTYAVEILVLYIINCFHSSVRGPLEVLYRFLDYYSTFDWEKNYVTIYGPQALSSLPEIVEKSECDGGEFLLSKELLKNYRDMCFVPKASETSPREFSIKYINILDPLKNDNNLGRSVNKGNLHRIGFALRFGARKLKEILKLPGQRMGGALEVFFMNTLNRNGKGQRPDIDVPIPAFGTGKSEEPVLVGDCDSYYGGLKYVQLYRNYAMPLVAQPSPSSPQFDADMLAPQFDADMLAPQQNWYMYYHRGADLYVPSQTFFHPNVPPQPTYGLEEIGKSRGTGTYIPDMSFELSKEDFPVLSSIGNSSLSASHQSEQDQNSSSPQIYIEFGTYSVSKSLKELSLGTKDQKKDSGVSSSKTLGTKDRKKDSGGSSSKGATTPVVPSRALQAKEKCTRMEKKMG*