Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473170 | XP_024633714.1 | 85.736 | 645 | 38 | 2 | 1 | 595 | 1 | 641 | 0.0 | 1117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473170 | A0A072V0L2 | 85.736 | 645 | 38 | 2 | 1 | 595 | 1 | 641 | 0.0 | 1117 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0377650 | Msa0473170 | 0.971758 | 1.138638e-133 | -8.615850e-47 |
| Msa0473170 | Msa1431980 | 0.926429 | 4.748261e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473170 | MtrunA17_Chr3g0128901 | 85.736 | 645 | 38 | 2 | 1 | 595 | 1 | 641 | 0.0 | 1117 |
| Msa0473170 | MtrunA17_Chr3g0128881 | 80.665 | 662 | 59 | 6 | 1 | 595 | 1 | 660 | 0.0 | 1056 |
| Msa0473170 | MtrunA17_Chr5g0432571 | 53.390 | 354 | 157 | 4 | 13 | 360 | 28 | 379 | 9.12e-118 | 368 |
| Msa0473170 | MtrunA17_Chr8g0347181 | 49.333 | 375 | 170 | 7 | 5 | 363 | 11 | 381 | 5.22e-111 | 360 |
| Msa0473170 | MtrunA17_Chr3g0126481 | 40.822 | 365 | 202 | 7 | 6 | 359 | 3 | 364 | 4.00e-89 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0473170 | AT3G56320.1 | 49.042 | 522 | 247 | 9 | 21 | 534 | 35 | 545 | 3.84e-160 | 471 |
| Msa0473170 | AT3G56320.6 | 49.042 | 522 | 247 | 9 | 21 | 534 | 35 | 545 | 3.84e-160 | 471 |
| Msa0473170 | AT3G56320.3 | 49.042 | 522 | 247 | 9 | 21 | 534 | 35 | 545 | 3.84e-160 | 471 |
| Msa0473170 | AT3G56320.7 | 49.042 | 522 | 247 | 9 | 21 | 534 | 35 | 545 | 3.84e-160 | 471 |
| Msa0473170 | AT3G56320.2 | 49.042 | 522 | 247 | 9 | 21 | 534 | 35 | 545 | 3.84e-160 | 471 |
| Msa0473170 | AT3G56320.5 | 49.042 | 522 | 247 | 9 | 21 | 534 | 35 | 545 | 3.84e-160 | 471 |
| Msa0473170 | AT3G56320.4 | 49.042 | 522 | 247 | 9 | 21 | 534 | 35 | 545 | 3.84e-160 | 471 |
| Msa0473170 | AT2G40520.1 | 45.416 | 469 | 224 | 8 | 21 | 483 | 28 | 470 | 3.52e-133 | 399 |
| Msa0473170 | AT2G40520.4 | 45.416 | 469 | 224 | 8 | 21 | 483 | 28 | 470 | 3.52e-133 | 399 |
| Msa0473170 | AT2G40520.2 | 45.416 | 469 | 224 | 8 | 21 | 483 | 28 | 470 | 3.52e-133 | 399 |
| Msa0473170 | AT2G40520.6 | 45.416 | 469 | 224 | 8 | 21 | 483 | 28 | 470 | 3.52e-133 | 399 |
| Msa0473170 | AT2G40520.3 | 45.416 | 469 | 224 | 8 | 21 | 483 | 28 | 470 | 3.52e-133 | 399 |
| Msa0473170 | AT2G40520.5 | 45.416 | 469 | 224 | 8 | 21 | 483 | 28 | 470 | 3.52e-133 | 399 |
| Msa0473170 | AT3G51620.3 | 53.846 | 351 | 157 | 3 | 24 | 369 | 32 | 382 | 4.89e-119 | 372 |
| Msa0473170 | AT3G51620.2 | 53.846 | 351 | 157 | 3 | 24 | 369 | 32 | 382 | 5.64e-119 | 372 |
| Msa0473170 | AT3G61690.2 | 48.305 | 354 | 168 | 6 | 21 | 363 | 34 | 383 | 2.01e-101 | 334 |
| Msa0473170 | AT3G61690.3 | 48.305 | 354 | 168 | 6 | 21 | 363 | 34 | 383 | 4.01e-101 | 334 |
| Msa0473170 | AT3G61690.1 | 48.305 | 354 | 168 | 6 | 21 | 363 | 34 | 383 | 4.01e-101 | 334 |
| Msa0473170 | AT3G51620.1 | 49.020 | 153 | 76 | 2 | 219 | 369 | 169 | 321 | 1.26e-35 | 143 |
| Msa0473170 | AT3G51620.1 | 51.079 | 139 | 65 | 1 | 24 | 159 | 32 | 170 | 1.85e-33 | 136 |
Find 179 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCTATGCTCTGCGCTTTC+TGG | 0.124072 | 3_3:+75645561 | Msa0473170:CDS |
| TTCCCAAACTCAGTTCTTTC+AGG | 0.177073 | 3_3:-75647921 | None:intergenic |
| GGATGAGGAGCTTTGGTTTA+TGG | 0.181696 | 3_3:+75644057 | Msa0473170:CDS |
| TAACACTTACCAACAATTTC+TGG | 0.199754 | 3_3:-75646538 | None:intergenic |
| GTGCGTCTTCCTCACAATTC+CGG | 0.233458 | 3_3:-75642751 | None:intergenic |
| AACATATGCAGTTGAAATAT+TGG | 0.240077 | 3_3:+75646278 | Msa0473170:CDS |
| ACTTATGGCCTTGAAGAAAT+AGG | 0.248024 | 3_3:+75647447 | Msa0473170:CDS |
| TCCTTTCCCATTTCTATTCA+AGG | 0.257627 | 3_3:-75647115 | None:intergenic |
| AGCAAAACGACATATTAATT+TGG | 0.259753 | 3_3:+75642568 | Msa0473170:five_prime_UTR |
| AAGAATTATGTCACCATATA+TGG | 0.263874 | 3_3:+75646493 | Msa0473170:CDS |
| CTTTGTTCCCAATGTCTTAG+AGG | 0.266003 | 3_3:-75647977 | None:intergenic |
| ATCGAATTGGATTCGCTCTT+AGG | 0.267225 | 3_3:+75647010 | Msa0473170:CDS |
| TGCGTCTTCCTCACAATTCC+GGG | 0.285766 | 3_3:-75642750 | None:intergenic |
| GAGTCCAGCCATCTGATTAA+AGG | 0.288341 | 3_3:-75645542 | None:intergenic |
| AGGCTGATTGGAGGTTACTA+TGG | 0.289238 | 3_3:+75644169 | Msa0473170:CDS |
| ATGAACACCTTGAATAGAAA+TGG | 0.297585 | 3_3:+75647108 | Msa0473170:CDS |
| ATCCCTGAAAGAACTGAGTT+TGG | 0.303245 | 3_3:+75647918 | Msa0473170:CDS |
| AAGGAGATCCTTAAGCTTCC+AGG | 0.314389 | 3_3:+75647051 | Msa0473170:CDS |
| CAAGATGTTAATGTACTTGA+TGG | 0.323385 | 3_3:-75646760 | None:intergenic |
| AGTTGTATTTGTAGTGTTAT+TGG | 0.327211 | 3_3:-75642490 | None:intergenic |
| GATGTTCCTATTCCTGCATT+TGG | 0.330206 | 3_3:+75647153 | Msa0473170:CDS |
| GGGAACAAAGGATCAGAAAA+AGG | 0.342380 | 3_3:+75647939 | Msa0473170:CDS |
| CATCAAGTACATTAACATCT+TGG | 0.350644 | 3_3:+75646761 | Msa0473170:CDS |
| GGGAACAAAGGATCGGAAAA+AGG | 0.355073 | 3_3:+75647990 | Msa0473170:CDS |
| TATTATGAGAGCCGAATTCT+TGG | 0.355737 | 3_3:+75646234 | Msa0473170:CDS |
| TTCTTTGTCCTGGAAGCTTA+AGG | 0.356817 | 3_3:-75647059 | None:intergenic |
| CCAGTACCAAATGCAGGAAT+AGG | 0.362227 | 3_3:-75647159 | None:intergenic |
| TCTGAAGAGCCTGTCCTTGT+TGG | 0.364547 | 3_3:+75647186 | Msa0473170:CDS |
| GTTCCTCCACAGCCAACTTA+TGG | 0.367868 | 3_3:+75647432 | Msa0473170:CDS |
| ATAGGGAAATCGCGAGGAAC+AGG | 0.368015 | 3_3:+75647465 | Msa0473170:CDS |
| TAAGGCTTGTGGACCATATA+TGG | 0.369108 | 3_3:-75646506 | None:intergenic |
| TTTGAGGCGATGAAGAATTC+TGG | 0.369752 | 3_3:-75647861 | None:intergenic |
| GCAGGCAATTTACATCGAAT+TGG | 0.370855 | 3_3:+75646997 | Msa0473170:intron |
| GTTTGGTGCTCGAAAGCTTA+AGG | 0.371049 | 3_3:+75647032 | Msa0473170:CDS |
| CCTATTCCTGCATTTGGTAC+TGG | 0.379307 | 3_3:+75647159 | Msa0473170:CDS |
| GCGATTTCCCTATTTCTTCA+AGG | 0.381372 | 3_3:-75647455 | None:intergenic |
| TAACTGCAGGTATTCGTGTT+TGG | 0.384662 | 3_3:+75644912 | Msa0473170:intron |
| CTGACAATTAATGGGAGTAT+TGG | 0.386485 | 3_3:+75642602 | Msa0473170:five_prime_UTR |
| TCCCTGAAAGAACTGAGTTT+GGG | 0.388572 | 3_3:+75647919 | Msa0473170:CDS |
| TGTTCCAAGTCGGGCATTGC+AGG | 0.388800 | 3_3:+75648053 | Msa0473170:CDS |
| CTTATGGCCTTGAAGAAATA+GGG | 0.389378 | 3_3:+75647448 | Msa0473170:CDS |
| TCTCAATGGATGAGGAGCTT+TGG | 0.392926 | 3_3:+75644050 | Msa0473170:CDS |
| GGAATAGGAACATCAATATC+AGG | 0.393746 | 3_3:-75647144 | None:intergenic |
| CAATTCCGGGTTCGTGTGTC+GGG | 0.393792 | 3_3:-75642737 | None:intergenic |
| TGACAATTAATGGGAGTATT+GGG | 0.393888 | 3_3:+75642603 | Msa0473170:five_prime_UTR |
| ATTGGATTCGCTCTTAGGTT+TGG | 0.398308 | 3_3:+75647015 | Msa0473170:CDS |
| AATTTCTGGTAGGGAGGATA+AGG | 0.401918 | 3_3:-75646524 | None:intergenic |
| TGCTTGCACCACAACAAAAC+TGG | 0.406419 | 3_3:+75647346 | Msa0473170:CDS |
| CTTTGTTGACACTGCGGCCT+AGG | 0.411152 | 3_3:-75646806 | None:intergenic |
| TGAAAGTGTTGAAGATGATT+TGG | 0.412844 | 3_3:+75644995 | Msa0473170:CDS |
| TGGTGTAGTAGCGCCTTTAG+AGG | 0.414140 | 3_3:-75648028 | None:intergenic |
| CATGGTGTGCACCAAGAATT+CGG | 0.416862 | 3_3:-75646245 | None:intergenic |
| GGCGAAGTCTCGGATGCCTT+TGG | 0.417078 | 3_3:-75646726 | None:intergenic |
| TGCTCTGCGCTTTCTGGAGC+AGG | 0.418440 | 3_3:+75645567 | Msa0473170:CDS |
| CTTCCACCAGATTACCATTC+CGG | 0.418559 | 3_3:+75642834 | Msa0473170:five_prime_UTR |
| TTCGCCTCAGAAACAACATT+TGG | 0.419282 | 3_3:-75644118 | None:intergenic |
| AATATCTCCATCTGGAAGAT+AGG | 0.421218 | 3_3:-75644952 | None:intergenic |
| CAAAAGCAATTTACCATGTC+AGG | 0.424060 | 3_3:-75647498 | None:intergenic |
| GAATTGTGCATAGTACTTCC+CGG | 0.426990 | 3_3:-75644093 | None:intergenic |
| AACTCGCCGGAATGGTAATC+TGG | 0.431804 | 3_3:-75642840 | None:intergenic |
| CTCAGGTTGACCAACTTGTC+GGG | 0.435786 | 3_3:+75646163 | Msa0473170:intron |
| GCTCCACCCATTCTTTGTCC+TGG | 0.435917 | 3_3:-75647069 | None:intergenic |
| TCCTCCCTACCAGAAATTGT+TGG | 0.446497 | 3_3:+75646529 | Msa0473170:CDS |
| TTTCCTGTTCTTTCAAGCAT+TGG | 0.448377 | 3_3:+75647799 | Msa0473170:CDS |
| ACAATTCCGGGTTCGTGTGT+CGG | 0.448580 | 3_3:-75642738 | None:intergenic |
| TGTTTCATCCTCTAAGACAT+TGG | 0.449458 | 3_3:+75647969 | Msa0473170:CDS |
| TCCCAAACTCAGTTCTTTCA+GGG | 0.453462 | 3_3:-75647920 | None:intergenic |
| TGTTGGTTAAGCAAGGAGTA+TGG | 0.454180 | 3_3:-75644022 | None:intergenic |
| CGTGTGTCGGGTTGGCGACC+CGG | 0.462629 | 3_3:-75642725 | None:intergenic |
| GTCAAGTCAATATCTCCATC+TGG | 0.466076 | 3_3:-75644960 | None:intergenic |
| GGCTGATTGGAGGTTACTAT+GGG | 0.468299 | 3_3:+75644170 | Msa0473170:CDS |
| ACTACTACAGCACATTTGAC+TGG | 0.470236 | 3_3:+75646467 | Msa0473170:CDS |
| TGTAGTGTTATTGGCAGCAA+TGG | 0.472585 | 3_3:-75642481 | None:intergenic |
| TTTGCCTGCAATGCCCGACT+TGG | 0.474276 | 3_3:-75648057 | None:intergenic |
| TTGCCAATGCTTGAAAGAAC+AGG | 0.474290 | 3_3:-75647802 | None:intergenic |
| AATGCCCGACTTGGAACAAC+TGG | 0.474339 | 3_3:-75648048 | None:intergenic |
| GTTTCATCCTCTAAGACATT+GGG | 0.476352 | 3_3:+75647970 | Msa0473170:CDS |
| GTTGGCTGTGGAGGAACATT+CGG | 0.479529 | 3_3:-75647426 | None:intergenic |
| GTGAGGAAGACGCACAGAAT+CGG | 0.480119 | 3_3:+75642759 | Msa0473170:five_prime_UTR |
| TCTCAGGTTGACCAACTTGT+CGG | 0.487700 | 3_3:+75646162 | Msa0473170:intron |
| TCCGGGTTCGTGTGTCGGGT+TGG | 0.489095 | 3_3:-75642733 | None:intergenic |
| CCTCAAATATATATCGAGTT+CGG | 0.490190 | 3_3:+75647877 | Msa0473170:CDS |
| TGAACACCTTGAATAGAAAT+GGG | 0.494237 | 3_3:+75647109 | Msa0473170:CDS |
| TAAGCTTCCAGGACAAAGAA+TGG | 0.494792 | 3_3:+75647062 | Msa0473170:CDS |
| TACACCAGTTGTTCCAAGTC+GGG | 0.500518 | 3_3:+75648044 | Msa0473170:CDS |
| GTAGTGTTATTGGCAGCAAT+GGG | 0.501601 | 3_3:-75642480 | None:intergenic |
| AGATTACCATTCCGGCGAGT+TGG | 0.502168 | 3_3:+75642842 | Msa0473170:five_prime_UTR |
| TAACCAACAGCTGTTCTCAA+TGG | 0.505452 | 3_3:+75644036 | Msa0473170:CDS |
| AAATTCACGAGGCGAAGTCT+CGG | 0.506262 | 3_3:-75646736 | None:intergenic |
| CCGAACTCGATATATATTTG+AGG | 0.507941 | 3_3:-75647877 | None:intergenic |
| TTTCTGAGGCGAACAGAAAG+AGG | 0.508759 | 3_3:+75644128 | Msa0473170:CDS |
| ATCTCCTTTAATCAGATGGC+TGG | 0.511050 | 3_3:+75645538 | Msa0473170:CDS |
| TTATGGCTGAAGAGAGGGCC+CGG | 0.513461 | 3_3:+75644074 | Msa0473170:CDS |
| GGAGACTGTGACAGTTACTA+TGG | 0.513710 | 3_3:+75647207 | Msa0473170:CDS |
| TGACATCTCCTTTAATCAGA+TGG | 0.515391 | 3_3:+75645534 | Msa0473170:CDS |
| TACTCGGATGGAGAAGAAGA+TGG | 0.516473 | 3_3:+75648089 | Msa0473170:CDS |
| AATTGTGCATAGTACTTCCC+GGG | 0.517882 | 3_3:-75644092 | None:intergenic |
| CGTGATCCAACTCGCCGGAA+TGG | 0.518694 | 3_3:-75642848 | None:intergenic |
| CAACTGCATATGTTGAGAGC+AGG | 0.519594 | 3_3:-75646269 | None:intergenic |
| GTATGCAATCTACTTGAAAG+TGG | 0.522636 | 3_3:+75645026 | Msa0473170:CDS |
| GGTAATCTGGTGGAAGCGGC+CGG | 0.523526 | 3_3:-75642827 | None:intergenic |
| AAATTGTGGTGATGAGGGAC+TGG | 0.525859 | 3_3:-75647286 | None:intergenic |
| GGATATGTGCTTTGTTCCAA+AGG | 0.526338 | 3_3:+75646710 | Msa0473170:CDS |
| CTCTAAGACATTGGGAACAA+AGG | 0.528110 | 3_3:+75647978 | Msa0473170:CDS |
| TTGGTTTATGGCTGAAGAGA+GGG | 0.528132 | 3_3:+75644069 | Msa0473170:CDS |
| TCAACCAAATGTTGTTTCTG+AGG | 0.531314 | 3_3:+75644114 | Msa0473170:CDS |
| TTATACTTTGTTTGAAGACA+TGG | 0.531505 | 3_3:-75646191 | None:intergenic |
| ATTTCTTCAAGGCCATAAGT+TGG | 0.531691 | 3_3:-75647444 | None:intergenic |
| AGCATCTCATCAATCTGAGC+AGG | 0.532090 | 3_3:+75647837 | Msa0473170:CDS |
| TCAAGGCCATAAGTTGGCTG+TGG | 0.535106 | 3_3:-75647438 | None:intergenic |
| TCACAGTCTCCAACAAGGAC+AGG | 0.537823 | 3_3:-75647195 | None:intergenic |
| GTATAATCTTAGTCAAAGCC+TGG | 0.544124 | 3_3:+75646208 | Msa0473170:CDS |
| AAGCTTCCAGGACAAAGAAT+GGG | 0.548125 | 3_3:+75647063 | Msa0473170:CDS |
| CAAGTCCTTTGAGCTCTCAA+AGG | 0.550937 | 3_3:+75647771 | Msa0473170:intron |
| GAATGGTAATCTGGTGGAAG+CGG | 0.551619 | 3_3:-75642831 | None:intergenic |
| TCCGGTGGTTCATCCTCTAA+AGG | 0.551979 | 3_3:+75648015 | Msa0473170:CDS |
| GCCAACCCGACACACGAACC+CGG | 0.552891 | 3_3:+75642732 | Msa0473170:five_prime_UTR |
| AGGCCATAAGTTGGCTGTGG+AGG | 0.557219 | 3_3:-75647435 | None:intergenic |
| AGAACTGAGTTTGGGAACAA+AGG | 0.559095 | 3_3:+75647927 | Msa0473170:CDS |
| AAGAATGGGTGGAGCACTTG+AGG | 0.561202 | 3_3:+75647077 | Msa0473170:CDS |
| AACGGTGGAATCGAGCGTCT+CGG | 0.561383 | 3_3:-75642782 | None:intergenic |
| GCATCAAATTGTGGTGATGA+GGG | 0.561475 | 3_3:-75647291 | None:intergenic |
| CTTACCAACAATTTCTGGTA+GGG | 0.561884 | 3_3:-75646533 | None:intergenic |
| AGCATCAAATTGTGGTGATG+AGG | 0.563396 | 3_3:-75647292 | None:intergenic |
| GCCTTTAGAGGATGAACCAC+CGG | 0.571281 | 3_3:-75648016 | None:intergenic |
| GCCGCGAAAACGAGTGGGAA+CGG | 0.573561 | 3_3:-75642800 | None:intergenic |
| TGGTATATGTATTATCATAG+AGG | 0.573998 | 3_3:+75647366 | Msa0473170:CDS |
| AAGTCGGGCATTGCAGGCAA+AGG | 0.574407 | 3_3:+75648059 | Msa0473170:CDS |
| ACTTACCAACAATTTCTGGT+AGG | 0.575839 | 3_3:-75646534 | None:intergenic |
| CTACTACAGCACATTTGACT+GGG | 0.576336 | 3_3:+75646468 | Msa0473170:CDS |
| GGTAGGGAGGATAAGGCTTG+TGG | 0.579729 | 3_3:-75646517 | None:intergenic |
| ATCTTCCTTTGAGAGCTCAA+AGG | 0.581581 | 3_3:-75647776 | None:intergenic |
| GATCACGATTCTGTCTACCT+TGG | 0.582371 | 3_3:+75642864 | Msa0473170:five_prime_UTR |
| ATCAGTGCGCGGTCCTCTAG+AGG | 0.583009 | 3_3:+75646329 | Msa0473170:CDS |
| TTTGGTTTATGGCTGAAGAG+AGG | 0.583512 | 3_3:+75644068 | Msa0473170:CDS |
| ACAGCTGTTCTCAATGGATG+AGG | 0.584883 | 3_3:+75644042 | Msa0473170:CDS |
| GAACAGCTGTTGGTTAAGCA+AGG | 0.591655 | 3_3:-75644029 | None:intergenic |
| TTTGTTCAGAGGCTGATTGG+AGG | 0.592781 | 3_3:+75644160 | Msa0473170:CDS |
| AAGACATAACTCACCTCTAG+AGG | 0.594984 | 3_3:-75646342 | None:intergenic |
| ACCAACAATTTCTGGTAGGG+AGG | 0.599391 | 3_3:-75646530 | None:intergenic |
| CGAATTCTTGGTGCACACCA+TGG | 0.601306 | 3_3:+75646246 | Msa0473170:CDS |
| AGCATATCAGCATCAAATTG+CGG | 0.605856 | 3_3:-75647327 | None:intergenic |
| GGGCTGTGCAACGAGCGGCA+TGG | 0.606132 | 3_3:-75647265 | None:intergenic |
| AGACATTGGGAACAAAGGAT+CGG | 0.609090 | 3_3:+75647983 | Msa0473170:CDS |
| TATGGCTGAAGAGAGGGCCC+GGG | 0.609268 | 3_3:+75644075 | Msa0473170:CDS |
| TCGGCTCTCATAATAGCACC+AGG | 0.612477 | 3_3:-75646226 | None:intergenic |
| GAGAAATCAGAATGCGATGG+AGG | 0.613094 | 3_3:+75646648 | Msa0473170:intron |
| GGAATCGCCGCGAAAACGAG+TGG | 0.613218 | 3_3:-75642806 | None:intergenic |
| ACTCGGATGGAGAAGAAGAT+GGG | 0.613497 | 3_3:+75648090 | Msa0473170:CDS |
| AGCATATCAGCATCAAATTG+TGG | 0.614031 | 3_3:-75647300 | None:intergenic |
| TCGCCGGAATGGTAATCTGG+TGG | 0.614764 | 3_3:-75642837 | None:intergenic |
| AGGCAAAGGAGAAGTGTACT+CGG | 0.617423 | 3_3:+75648073 | Msa0473170:CDS |
| AAAGGAGAAGTGTACTCGGA+TGG | 0.622221 | 3_3:+75648077 | Msa0473170:CDS |
| CATCCATTGAGAACAGCTGT+TGG | 0.622748 | 3_3:-75644039 | None:intergenic |
| CTACACCAGTTGTTCCAAGT+CGG | 0.625328 | 3_3:+75648043 | Msa0473170:CDS |
| CTTCCAGGACAAAGAATGGG+TGG | 0.626874 | 3_3:+75647066 | Msa0473170:CDS |
| GCAGAGAAATCAGAATGCGA+TGG | 0.627043 | 3_3:+75646645 | Msa0473170:intron |
| CATACAACAAATACGTGCGC+AGG | 0.630522 | 3_3:+75645076 | Msa0473170:CDS |
| AATTGTGGTGATGAGGGACT+GGG | 0.637522 | 3_3:-75647285 | None:intergenic |
| CACACGAACCCGGAATTGTG+AGG | 0.649650 | 3_3:+75642742 | Msa0473170:five_prime_UTR |
| ATAGAAATGGGAAAGGACAA+AGG | 0.653507 | 3_3:+75647121 | Msa0473170:CDS |
| ACCTTGAATAGAAATGGGAA+AGG | 0.654152 | 3_3:+75647114 | Msa0473170:CDS |
| TAGGGAAATCGCGAGGAACA+GGG | 0.654764 | 3_3:+75647466 | Msa0473170:CDS |
| GGACTGGGCTGTGCAACGAG+CGG | 0.654982 | 3_3:-75647270 | None:intergenic |
| AGAATCGTGATCCAACTCGC+CGG | 0.658236 | 3_3:-75642853 | None:intergenic |
| GGATGAAAGAAAGTCTGACT+CGG | 0.660418 | 3_3:-75647405 | None:intergenic |
| CAATCTACTTGAAAGTGGAG+AGG | 0.661750 | 3_3:+75645031 | Msa0473170:CDS |
| AACTGTCACAGTCTCCAACA+AGG | 0.665217 | 3_3:-75647200 | None:intergenic |
| GACTGTGACAGTTACTATGG+CGG | 0.665616 | 3_3:+75647210 | Msa0473170:CDS |
| AGGGACTTACATACCTGACA+TGG | 0.666188 | 3_3:+75647485 | Msa0473170:CDS |
| GAATCGCCGCGAAAACGAGT+GGG | 0.668176 | 3_3:-75642805 | None:intergenic |
| CTAGGCCGCAGTGTCAACAA+AGG | 0.669859 | 3_3:+75646807 | Msa0473170:CDS |
| CTGATTGGAGGTTACTATGG+GGG | 0.677599 | 3_3:+75644172 | Msa0473170:CDS |
| CATATGTTGAGAGCAGGCCA+TGG | 0.683524 | 3_3:-75646263 | None:intergenic |
| GCTGATTGGAGGTTACTATG+GGG | 0.687909 | 3_3:+75644171 | Msa0473170:CDS |
| GCGAAAACGAGTGGGAACGG+TGG | 0.691551 | 3_3:-75642797 | None:intergenic |
| AATTACCTTTGTTGACACTG+CGG | 0.695204 | 3_3:-75646812 | None:intergenic |
| GAAGAAATAGGGAAATCGCG+AGG | 0.719824 | 3_3:+75647459 | Msa0473170:CDS |
| TACTTGATGGAAAATTCACG+AGG | 0.737950 | 3_3:-75646747 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGAAAAAACAATTTTTT+AGG | - | chr3_3:75643005-75643024 | None:intergenic | 10.0% |
| !!! | AAAACTATTTTTTGTTTATT+TGG | + | chr3_3:75643135-75643154 | Msa0473170:intron | 10.0% |
| !! | ATATAAAACATCAATAAATT+TGG | - | chr3_3:75644791-75644810 | None:intergenic | 10.0% |
| !! | AAAAGATAATATGTTTATTA+CGG | - | chr3_3:75644886-75644905 | None:intergenic | 10.0% |
| !!! | AATAAACATATTATCTTTTA+TGG | + | chr3_3:75644887-75644906 | Msa0473170:intron | 10.0% |
| !!! | ATAAACATATTATCTTTTAT+GGG | + | chr3_3:75644888-75644907 | Msa0473170:intron | 10.0% |
| !!! | TATTTTTTGTTTATTTGGTT+TGG | + | chr3_3:75643140-75643159 | Msa0473170:intron | 15.0% |
| !!! | ACATTTTCCTAAATTATTTT+CGG | + | chr3_3:75643794-75643813 | Msa0473170:intron | 15.0% |
| !!! | ATAATGTTTACATAGTTTTT+TGG | + | chr3_3:75644609-75644628 | Msa0473170:intron | 15.0% |
| !! | TTTAAATTTCAAAAGCTTTA+AGG | + | chr3_3:75644812-75644831 | Msa0473170:intron | 15.0% |
| !! | TATTATTATTATTATTCGCA+CGG | - | chr3_3:75647651-75647670 | None:intergenic | 15.0% |
| !! | AAAAAAACACTGACAATTAA+TGG | + | chr3_3:75642593-75642612 | Msa0473170:five_prime_UTR | 20.0% |
| !! | AAAAAACACTGACAATTAAT+GGG | + | chr3_3:75642594-75642613 | Msa0473170:five_prime_UTR | 20.0% |
| !!! | CTTGATTTTATAGATTTGTA+TGG | + | chr3_3:75643373-75643392 | Msa0473170:intron | 20.0% |
| !! | TTGTACGAAATTATAATTCT+AGG | + | chr3_3:75643500-75643519 | Msa0473170:intron | 20.0% |
| !! | AAAAACAAACCAAAACAAAA+TGG | - | chr3_3:75643685-75643704 | None:intergenic | 20.0% |
| !!! | ATATTATATGAGTTGGAAAA+AGG | - | chr3_3:75644452-75644471 | None:intergenic | 20.0% |
| !! | TCACAATTATTTATTTACTC+TGG | + | chr3_3:75644706-75644725 | Msa0473170:intron | 20.0% |
| !! | AAACATCAATAAATTTGGAA+TGG | - | chr3_3:75644786-75644805 | None:intergenic | 20.0% |
| !!! | ATTTTTCATTTGCTGTTTTT+TGG | + | chr3_3:75645192-75645211 | Msa0473170:intron | 20.0% |
| !! | TCATTTAAAAACAAATTCTC+AGG | + | chr3_3:75646146-75646165 | Msa0473170:intron | 20.0% |
| !!! | ATTAAAGCATCAATTGATTA+CGG | + | chr3_3:75646841-75646860 | Msa0473170:intron | 20.0% |
| !!! | TATATCATCCTAAATGTTTT+TGG | + | chr3_3:75647554-75647573 | Msa0473170:intron | 20.0% |
| ! | AGTTGTATTTGTAGTGTTAT+TGG | - | chr3_3:75642493-75642512 | None:intergenic | 25.0% |
| ! | AGCAAAACGACATATTAATT+TGG | + | chr3_3:75642568-75642587 | Msa0473170:five_prime_UTR | 25.0% |
| !! | GAAAGTTTTCGTCAATTAAT+TGG | + | chr3_3:75642625-75642644 | Msa0473170:five_prime_UTR | 25.0% |
| ! | TTTACCTCAAAAACCAAAAA+AGG | - | chr3_3:75642896-75642915 | None:intergenic | 25.0% |
| ! | ATGAAGTTCTTCAATTGAAT+TGG | + | chr3_3:75643402-75643421 | Msa0473170:intron | 25.0% |
| !! | TTCTTCAATTGAATTGGTTT+AGG | + | chr3_3:75643408-75643427 | Msa0473170:intron | 25.0% |
| ! | TCACAGTTACAAAATCATTA+GGG | - | chr3_3:75643451-75643470 | None:intergenic | 25.0% |
| ! | ATCACAGTTACAAAATCATT+AGG | - | chr3_3:75643452-75643471 | None:intergenic | 25.0% |
| !!! | ACACATTTTCCATTTTGTTT+TGG | + | chr3_3:75643673-75643692 | Msa0473170:intron | 25.0% |
| !!! | TTGTAGTGTTATTTAACCTT+TGG | + | chr3_3:75643920-75643939 | Msa0473170:intron | 25.0% |
| !!! | GATTGCTGTTTAAAATTGAT+TGG | + | chr3_3:75644343-75644362 | Msa0473170:intron | 25.0% |
| ! | CAGTATCATATTATATGAGT+TGG | - | chr3_3:75644459-75644478 | None:intergenic | 25.0% |
| ! | AATATGATACTGCACAATAT+CGG | + | chr3_3:75644467-75644486 | Msa0473170:intron | 25.0% |
| ! | AAAATTCAGCTACAAAGTTT+AGG | - | chr3_3:75644524-75644543 | None:intergenic | 25.0% |
| !! | CTTTGTAGCTGAATTTTAAA+AGG | + | chr3_3:75644527-75644546 | Msa0473170:intron | 25.0% |
| ! | GCTTCAATTGAATAATATTG+AGG | + | chr3_3:75644677-75644696 | Msa0473170:intron | 25.0% |
| !!! | TTTGTTGTATGTCTTTTACT+TGG | - | chr3_3:75645067-75645086 | None:intergenic | 25.0% |
| ! | ATTTACATCCTATGTGAAAA+AGG | + | chr3_3:75645318-75645337 | Msa0473170:intron | 25.0% |
| !!! | TTCACTTTTTCTCTTTTTCT+CGG | + | chr3_3:75645377-75645396 | Msa0473170:intron | 25.0% |
| !! | TTAAACACAATTTTCCAATC+AGG | - | chr3_3:75645407-75645426 | None:intergenic | 25.0% |
| !! | TAAGACTTCCTTTTTATGTT+TGG | + | chr3_3:75645459-75645478 | Msa0473170:intron | 25.0% |
| ! | TATAAACTGTACAAACTAAC+AGG | - | chr3_3:75645689-75645708 | None:intergenic | 25.0% |
| ! | TTGTACAGTTTATATAAAGC+AGG | + | chr3_3:75645695-75645714 | Msa0473170:intron | 25.0% |
| ! | AAAAATGAGTCAAAAAAGAC+AGG | - | chr3_3:75645836-75645855 | None:intergenic | 25.0% |
| !! | TTATACTTTGTTTGAAGACA+TGG | - | chr3_3:75646194-75646213 | None:intergenic | 25.0% |
| ! | AACATATGCAGTTGAAATAT+TGG | + | chr3_3:75646278-75646297 | Msa0473170:CDS | 25.0% |
| ! | TGTAAATACAAATGCTGAAA+GGG | - | chr3_3:75646386-75646405 | None:intergenic | 25.0% |
| ! | ATGTAAATACAAATGCTGAA+AGG | - | chr3_3:75646387-75646406 | None:intergenic | 25.0% |
| ! | AAGAATTATGTCACCATATA+TGG | + | chr3_3:75646493-75646512 | Msa0473170:CDS | 25.0% |
| !! | AAATTGTTGGTAAGTGTTAA+TGG | + | chr3_3:75646542-75646561 | Msa0473170:intron | 25.0% |
| !! | AATTGTTGGTAAGTGTTAAT+GGG | + | chr3_3:75646543-75646562 | Msa0473170:intron | 25.0% |
| ! | TGGTATATGTATTATCATAG+AGG | + | chr3_3:75647366-75647385 | Msa0473170:CDS | 25.0% |
| ! | AGAAACATCCAAAAACATTT+AGG | - | chr3_3:75647565-75647584 | None:intergenic | 25.0% |
| !! | TGACAATTAATGGGAGTATT+GGG | + | chr3_3:75642603-75642622 | Msa0473170:five_prime_UTR | 30.0% |
| ! | CTGTATTTGTGTAACGTTTT+TGG | - | chr3_3:75642663-75642682 | None:intergenic | 30.0% |
| !!! | TCTCTCTGTTTTTAAGTAAC+CGG | + | chr3_3:75642706-75642725 | Msa0473170:five_prime_UTR | 30.0% |
| !!! | GAAACCTTTTTTGGTTTTTG+AGG | + | chr3_3:75642889-75642908 | Msa0473170:five_prime_UTR | 30.0% |
| ATTCTTGTGATTGGACTTAA+TGG | + | chr3_3:75642966-75642985 | Msa0473170:intron | 30.0% | |
| TTCTTGTGATTGGACTTAAT+GGG | + | chr3_3:75642967-75642986 | Msa0473170:intron | 30.0% | |
| !! | AGCCTTGTTAAATTCACTTT+AGG | + | chr3_3:75643338-75643357 | Msa0473170:intron | 30.0% |
| ! | GCCTTGTTAAATTCACTTTA+GGG | + | chr3_3:75643339-75643358 | Msa0473170:intron | 30.0% |
| ACCCTAAAGTGAATTTAACA+AGG | - | chr3_3:75643343-75643362 | None:intergenic | 30.0% | |
| GTAGACACCGAAAATAATTT+AGG | - | chr3_3:75643804-75643823 | None:intergenic | 30.0% | |
| AGTACTAACAAGGAAATGAA+TGG | - | chr3_3:75643855-75643874 | None:intergenic | 30.0% | |
| !!! | TAACCTTTGGTTTGTTGTTT+TGG | + | chr3_3:75643933-75643952 | Msa0473170:intron | 30.0% |
| AAACCAAAACAACAAACCAA+AGG | - | chr3_3:75643939-75643958 | None:intergenic | 30.0% | |
| !!! | GGATTATTGATTTTGTTCAG+AGG | + | chr3_3:75644149-75644168 | Msa0473170:CDS | 30.0% |
| ! | TTTTAACCTTCGATTGTTGT+AGG | + | chr3_3:75644228-75644247 | Msa0473170:intron | 30.0% |
| ATAGAAAGCAAAAAGGGAAA+TGG | - | chr3_3:75644377-75644396 | None:intergenic | 30.0% | |
| GGAAACATAGAAAGCAAAAA+GGG | - | chr3_3:75644383-75644402 | None:intergenic | 30.0% | |
| AGGAAACATAGAAAGCAAAA+AGG | - | chr3_3:75644384-75644403 | None:intergenic | 30.0% | |
| !!! | AAGGTTTTATTTTCTGCTCA+AGG | - | chr3_3:75644433-75644452 | None:intergenic | 30.0% |
| TTAAGATTTGCACCTTTACA+AGG | - | chr3_3:75644590-75644609 | None:intergenic | 30.0% | |
| ! | CATCAATAAATTTGGAATGG+AGG | - | chr3_3:75644783-75644802 | None:intergenic | 30.0% |
| !! | TGATGAGACCAATTTGTTTT+CGG | - | chr3_3:75644840-75644859 | None:intergenic | 30.0% |
| !! | TGAAAGTGTTGAAGATGATT+TGG | + | chr3_3:75644995-75645014 | Msa0473170:CDS | 30.0% |
| ! | AATCTTAAACGCTATTTCAG+AGG | - | chr3_3:75645175-75645194 | None:intergenic | 30.0% |
| ! | TCCTTTTTATGTTTGGCAAT+TGG | + | chr3_3:75645466-75645485 | Msa0473170:intron | 30.0% |
| TCCAATTGCCAAACATAAAA+AGG | - | chr3_3:75645470-75645489 | None:intergenic | 30.0% | |
| AGCTATAGATATTAAGCACA+CGG | - | chr3_3:75645649-75645668 | None:intergenic | 30.0% | |
| ATTGTTGAGTAGAACTAATG+TGG | + | chr3_3:75645724-75645743 | Msa0473170:intron | 30.0% | |
| ATTATATCTTATGCCGTGTT+AGG | + | chr3_3:75645776-75645795 | Msa0473170:intron | 30.0% | |
| TAACACTTACCAACAATTTC+TGG | - | chr3_3:75646541-75646560 | None:intergenic | 30.0% | |
| ! | ATTGTTGGTAAGTGTTAATG+GGG | + | chr3_3:75646544-75646563 | Msa0473170:intron | 30.0% |
| ! | AAGAGCTTCTGAAAAATTAC+AGG | + | chr3_3:75646688-75646707 | Msa0473170:CDS | 30.0% |
| ! | AGAGCTTCTGAAAAATTACA+GGG | + | chr3_3:75646689-75646708 | Msa0473170:CDS | 30.0% |
| CAAGATGTTAATGTACTTGA+TGG | - | chr3_3:75646763-75646782 | None:intergenic | 30.0% | |
| CATCAAGTACATTAACATCT+TGG | + | chr3_3:75646761-75646780 | Msa0473170:CDS | 30.0% | |
| !!! | AGGTTGTTGTCATTTTTTAG+AGG | - | chr3_3:75646789-75646808 | None:intergenic | 30.0% |
| CTAAAAAATGACAACAACCT+AGG | + | chr3_3:75646789-75646808 | Msa0473170:CDS | 30.0% | |
| ATGAACACCTTGAATAGAAA+TGG | + | chr3_3:75647108-75647127 | Msa0473170:CDS | 30.0% | |
| TGAACACCTTGAATAGAAAT+GGG | + | chr3_3:75647109-75647128 | Msa0473170:CDS | 30.0% | |
| !!! | TACATATACCAGTTTTGTTG+TGG | - | chr3_3:75647357-75647376 | None:intergenic | 30.0% |
| !! | CTCTTCTATTTGTTTTCTCT+TGG | - | chr3_3:75647716-75647735 | None:intergenic | 30.0% |
| CAAGAGAAAACAAATAGAAG+AGG | + | chr3_3:75647714-75647733 | Msa0473170:intron | 30.0% | |
| CCTCAAATATATATCGAGTT+CGG | + | chr3_3:75647877-75647896 | Msa0473170:CDS | 30.0% | |
| ! | CTGACAATTAATGGGAGTAT+TGG | + | chr3_3:75642602-75642621 | Msa0473170:five_prime_UTR | 35.0% |
| !!! | CTCTCTGTTTTTAAGTAACC+GGG | + | chr3_3:75642707-75642726 | Msa0473170:five_prime_UTR | 35.0% |
| ! | TATGAACTTGTGTTGATCAG+AGG | + | chr3_3:75642939-75642958 | Msa0473170:intron | 35.0% |
| AGAGGCTAAATTCTTGTGAT+TGG | + | chr3_3:75642957-75642976 | Msa0473170:intron | 35.0% | |
| GTTATGTCGTTCTCATTGTT+TGG | + | chr3_3:75643073-75643092 | Msa0473170:intron | 35.0% | |
| !! | TGTTTATTTGGTTTGGAGCT+AGG | + | chr3_3:75643147-75643166 | Msa0473170:intron | 35.0% |
| !! | GTTTATTTGGTTTGGAGCTA+GGG | + | chr3_3:75643148-75643167 | Msa0473170:intron | 35.0% |
| TTACACGAACTCTTGTAGAA+TGG | + | chr3_3:75643545-75643564 | Msa0473170:intron | 35.0% | |
| TACACGAACTCTTGTAGAAT+GGG | + | chr3_3:75643546-75643565 | Msa0473170:intron | 35.0% | |
| TAGGGGTTAATATCAAGGAT+GGG | - | chr3_3:75643610-75643629 | None:intergenic | 35.0% | |
| ATAGGGGTTAATATCAAGGA+TGG | - | chr3_3:75643611-75643630 | None:intergenic | 35.0% | |
| TGAGATAGGGGTTAATATCA+AGG | - | chr3_3:75643615-75643634 | None:intergenic | 35.0% | |
| ! | AGAGTGATGAAGTACTAACA+AGG | - | chr3_3:75643865-75643884 | None:intergenic | 35.0% |
| !!! | GTTGTTTTGGTTTTGTTTGC+AGG | + | chr3_3:75643946-75643965 | Msa0473170:intron | 35.0% |
| !!! | GGATATCTGAGTTTTGAGAT+TGG | + | chr3_3:75643967-75643986 | Msa0473170:intron | 35.0% |
| !! | TCAACCAAATGTTGTTTCTG+AGG | + | chr3_3:75644114-75644133 | Msa0473170:CDS | 35.0% |
| ! | TATTTTCTGCTCAAGGTATG+AGG | - | chr3_3:75644426-75644445 | None:intergenic | 35.0% |
| TACAAAGTTTAGGCTGACAT+GGG | - | chr3_3:75644514-75644533 | None:intergenic | 35.0% | |
| TTTGCACCTTTACAAGGTAT+GGG | - | chr3_3:75644584-75644603 | None:intergenic | 35.0% | |
| ATTTGCACCTTTACAAGGTA+TGG | - | chr3_3:75644585-75644604 | None:intergenic | 35.0% | |
| !! | TTAAGGTGCCGAAAACAAAT+TGG | + | chr3_3:75644829-75644848 | Msa0473170:intron | 35.0% |
| TCATGTGTATACCATTACAG+TGG | + | chr3_3:75644857-75644876 | Msa0473170:intron | 35.0% | |
| !! | ATCTTTTATGGGTTAACTGC+AGG | + | chr3_3:75644899-75644918 | Msa0473170:intron | 35.0% |
| !!! | CTGGAAGATAGGTTTTTAGT+GGG | - | chr3_3:75644944-75644963 | None:intergenic | 35.0% |
| !! | TCTGGAAGATAGGTTTTTAG+TGG | - | chr3_3:75644945-75644964 | None:intergenic | 35.0% |
| CTAAAAACCTATCTTCCAGA+TGG | + | chr3_3:75644945-75644964 | Msa0473170:CDS | 35.0% | |
| AATATCTCCATCTGGAAGAT+AGG | - | chr3_3:75644955-75644974 | None:intergenic | 35.0% | |
| GTATGCAATCTACTTGAAAG+TGG | + | chr3_3:75645026-75645045 | Msa0473170:CDS | 35.0% | |
| ! | TGTCTTTTACTTGGTACTCA+TGG | - | chr3_3:75645058-75645077 | None:intergenic | 35.0% |
| !! | GAAACACTCCTTTTTCACAT+AGG | - | chr3_3:75645329-75645348 | None:intergenic | 35.0% |
| ! | TTTTTCTCGGTTTTCCTGAT+TGG | + | chr3_3:75645390-75645409 | Msa0473170:intron | 35.0% |
| TGACATCTCCTTTAATCAGA+TGG | + | chr3_3:75645534-75645553 | Msa0473170:CDS | 35.0% | |
| GTAGAACTAATGTGGTTAGT+TGG | + | chr3_3:75645732-75645751 | Msa0473170:intron | 35.0% | |
| TGTAAATGGGAATCCTAACA+CGG | - | chr3_3:75645792-75645811 | None:intergenic | 35.0% | |
| TAGAAACTGTAGGAATGGAA+GGG | - | chr3_3:75645905-75645924 | None:intergenic | 35.0% | |
| AGTAGTAGAAACTGTAGGAA+TGG | - | chr3_3:75645910-75645929 | None:intergenic | 35.0% | |
| AGTCAAGTAGTAGAAACTGT+AGG | - | chr3_3:75645915-75645934 | None:intergenic | 35.0% | |
| ATTCAGTCAGATTGTTGCAA+TGG | + | chr3_3:75646009-75646028 | Msa0473170:intron | 35.0% | |
| ! | TGGAAAAAGAGAGCATAAAG+AGG | - | chr3_3:75646069-75646088 | None:intergenic | 35.0% |
| AAAATGTCCTGCTCATATTC+AGG | + | chr3_3:75646105-75646124 | Msa0473170:intron | 35.0% | |
| GTATAATCTTAGTCAAAGCC+TGG | + | chr3_3:75646208-75646227 | Msa0473170:CDS | 35.0% | |
| TATTATGAGAGCCGAATTCT+TGG | + | chr3_3:75646234-75646253 | Msa0473170:CDS | 35.0% | |
| !! | CTTACCAACAATTTCTGGTA+GGG | - | chr3_3:75646536-75646555 | None:intergenic | 35.0% |
| !! | ACTTACCAACAATTTCTGGT+AGG | - | chr3_3:75646537-75646556 | None:intergenic | 35.0% |
| TACTTGATGGAAAATTCACG+AGG | - | chr3_3:75646750-75646769 | None:intergenic | 35.0% | |
| AATTACCTTTGTTGACACTG+CGG | - | chr3_3:75646815-75646834 | None:intergenic | 35.0% | |
| ! | AGATGTGGTTTTCACTAAGT+TGG | - | chr3_3:75646903-75646922 | None:intergenic | 35.0% |
| GTCACTAGCAATTAAAGATG+TGG | - | chr3_3:75646918-75646937 | None:intergenic | 35.0% | |
| ACCTTGAATAGAAATGGGAA+AGG | + | chr3_3:75647114-75647133 | Msa0473170:CDS | 35.0% | |
| TCCTTTCCCATTTCTATTCA+AGG | - | chr3_3:75647118-75647137 | None:intergenic | 35.0% | |
| ATAGAAATGGGAAAGGACAA+AGG | + | chr3_3:75647121-75647140 | Msa0473170:CDS | 35.0% | |
| GGAATAGGAACATCAATATC+AGG | - | chr3_3:75647147-75647166 | None:intergenic | 35.0% | |
| AGCATATCAGCATCAAATTG+TGG | - | chr3_3:75647303-75647322 | None:intergenic | 35.0% | |
| AGCATATCAGCATCAAATTG+CGG | - | chr3_3:75647303-75647322 | None:intergenic | 35.0% | |
| ATTTCTTCAAGGCCATAAGT+TGG | - | chr3_3:75647447-75647466 | None:intergenic | 35.0% | |
| ! | ACTTATGGCCTTGAAGAAAT+AGG | + | chr3_3:75647447-75647466 | Msa0473170:CDS | 35.0% |
| ! | CTTATGGCCTTGAAGAAATA+GGG | + | chr3_3:75647448-75647467 | Msa0473170:CDS | 35.0% |
| CAAAAGCAATTTACCATGTC+AGG | - | chr3_3:75647501-75647520 | None:intergenic | 35.0% | |
| ATTATTATTATTCGCACGGC+TGG | - | chr3_3:75647647-75647666 | None:intergenic | 35.0% | |
| TTTCCTGTTCTTTCAAGCAT+TGG | + | chr3_3:75647799-75647818 | Msa0473170:CDS | 35.0% | |
| CCGAACTCGATATATATTTG+AGG | - | chr3_3:75647880-75647899 | None:intergenic | 35.0% | |
| AAGGATCAGAAAAAGGATTC+TGG | + | chr3_3:75647946-75647965 | Msa0473170:CDS | 35.0% | |
| !! | TGTTTCATCCTCTAAGACAT+TGG | + | chr3_3:75647969-75647988 | Msa0473170:CDS | 35.0% |
| !! | GTTTCATCCTCTAAGACATT+GGG | + | chr3_3:75647970-75647989 | Msa0473170:CDS | 35.0% |
| ! | GTAGTGTTATTGGCAGCAAT+GGG | - | chr3_3:75642483-75642502 | None:intergenic | 40.0% |
| ! | TGTAGTGTTATTGGCAGCAA+TGG | - | chr3_3:75642484-75642503 | None:intergenic | 40.0% |
| !!! | ACCTTGGCTGAAACCTTTTT+TGG | + | chr3_3:75642880-75642899 | Msa0473170:five_prime_UTR | 40.0% |
| ACCAAAAAAGGTTTCAGCCA+AGG | - | chr3_3:75642884-75642903 | None:intergenic | 40.0% | |
| TACAAAACAGGTATAGGCAC+AGG | - | chr3_3:75643266-75643285 | None:intergenic | 40.0% | |
| TCCAGCTACAAAACAGGTAT+AGG | - | chr3_3:75643272-75643291 | None:intergenic | 40.0% | |
| TATTTCCAGAACAAACACGC+TGG | - | chr3_3:75643586-75643605 | None:intergenic | 40.0% | |
| !! | TGTGTCGGTTCAGTGTTAAA+TGG | + | chr3_3:75643755-75643774 | Msa0473170:intron | 40.0% |
| !! | TCAGTGTTGATGTCAGTGTT+TGG | + | chr3_3:75643826-75643845 | Msa0473170:intron | 40.0% |
| !!! | AGTTTTGAGATTGGCAGCAA+TGG | + | chr3_3:75643976-75643995 | Msa0473170:exon | 40.0% |
| !!! | GTTTTGAGATTGGCAGCAAT+GGG | + | chr3_3:75643977-75643996 | Msa0473170:exon | 40.0% |
| ! | TGTTGGTTAAGCAAGGAGTA+TGG | - | chr3_3:75644025-75644044 | None:intergenic | 40.0% |
| TAACCAACAGCTGTTCTCAA+TGG | + | chr3_3:75644036-75644055 | Msa0473170:CDS | 40.0% | |
| ! | TTTGGTTTATGGCTGAAGAG+AGG | + | chr3_3:75644068-75644087 | Msa0473170:CDS | 40.0% |
| TTGGTTTATGGCTGAAGAGA+GGG | + | chr3_3:75644069-75644088 | Msa0473170:CDS | 40.0% | |
| AATTGTGCATAGTACTTCCC+GGG | - | chr3_3:75644095-75644114 | None:intergenic | 40.0% | |
| GAATTGTGCATAGTACTTCC+CGG | - | chr3_3:75644096-75644115 | None:intergenic | 40.0% | |
| TTCGCCTCAGAAACAACATT+TGG | - | chr3_3:75644121-75644140 | None:intergenic | 40.0% | |
| ! | GATTTTGTTCAGAGGCTGAT+TGG | + | chr3_3:75644157-75644176 | Msa0473170:CDS | 40.0% |
| !! | GTAGGAGTGGGTTATGTATT+TGG | + | chr3_3:75644246-75644265 | Msa0473170:intron | 40.0% |
| ! | CAAAGTTGCTTTCTTTCCCA+TGG | + | chr3_3:75644286-75644305 | Msa0473170:intron | 40.0% |
| TGCTTTCTTTCCCATGGATT+TGG | + | chr3_3:75644292-75644311 | Msa0473170:intron | 40.0% | |
| ! | TTCTTTCCCATGGATTTGGT+TGG | + | chr3_3:75644296-75644315 | Msa0473170:intron | 40.0% |
| ! | TCTTTCCCATGGATTTGGTT+GGG | + | chr3_3:75644297-75644316 | Msa0473170:intron | 40.0% |
| AAACACCCAACCAAATCCAT+GGG | - | chr3_3:75644305-75644324 | None:intergenic | 40.0% | |
| AAAACACCCAACCAAATCCA+TGG | - | chr3_3:75644306-75644325 | None:intergenic | 40.0% | |
| TGACATGGGACAATATTTGC+TGG | - | chr3_3:75644500-75644519 | None:intergenic | 40.0% | |
| CTACAAAGTTTAGGCTGACA+TGG | - | chr3_3:75644515-75644534 | None:intergenic | 40.0% | |
| TATTACGGACACCACTGTAA+TGG | - | chr3_3:75644871-75644890 | None:intergenic | 40.0% | |
| TAACTGCAGGTATTCGTGTT+TGG | + | chr3_3:75644912-75644931 | Msa0473170:intron | 40.0% | |
| GTCAAGTCAATATCTCCATC+TGG | - | chr3_3:75644963-75644982 | None:intergenic | 40.0% | |
| CAATCTACTTGAAAGTGGAG+AGG | + | chr3_3:75645031-75645050 | Msa0473170:CDS | 40.0% | |
| AAGTAAAGCGATAACTGCAG+TGG | - | chr3_3:75645351-75645370 | None:intergenic | 40.0% | |
| ATCTCCTTTAATCAGATGGC+TGG | + | chr3_3:75645538-75645557 | Msa0473170:CDS | 40.0% | |
| ACAAACTAACAGGAACACGA+GGG | - | chr3_3:75645679-75645698 | None:intergenic | 40.0% | |
| TACAAACTAACAGGAACACG+AGG | - | chr3_3:75645680-75645699 | None:intergenic | 40.0% | |
| AGAAACTGTAGGAATGGAAG+GGG | - | chr3_3:75645904-75645923 | None:intergenic | 40.0% | |
| GTAGAAACTGTAGGAATGGA+AGG | - | chr3_3:75645906-75645925 | None:intergenic | 40.0% | |
| GCAACAATCTGACTGAATAG+AGG | - | chr3_3:75646007-75646026 | None:intergenic | 40.0% | |
| ! | TGTTTTCATTCATCAGTGCG+CGG | + | chr3_3:75646318-75646337 | Msa0473170:CDS | 40.0% |
| AAGACATAACTCACCTCTAG+AGG | - | chr3_3:75646345-75646364 | None:intergenic | 40.0% | |
| ACTACTACAGCACATTTGAC+TGG | + | chr3_3:75646467-75646486 | Msa0473170:CDS | 40.0% | |
| CTACTACAGCACATTTGACT+GGG | + | chr3_3:75646468-75646487 | Msa0473170:CDS | 40.0% | |
| TAAGGCTTGTGGACCATATA+TGG | - | chr3_3:75646509-75646528 | None:intergenic | 40.0% | |
| !! | AATTTCTGGTAGGGAGGATA+AGG | - | chr3_3:75646527-75646546 | None:intergenic | 40.0% |
| ! | GGATATGTGCTTTGTTCCAA+AGG | + | chr3_3:75646710-75646729 | Msa0473170:CDS | 40.0% |
| ATTCGATGTAAATTGCCTGC+AGG | - | chr3_3:75646997-75647016 | None:intergenic | 40.0% | |
| GCAGGCAATTTACATCGAAT+TGG | + | chr3_3:75646997-75647016 | Msa0473170:intron | 40.0% | |
| ATCGAATTGGATTCGCTCTT+AGG | + | chr3_3:75647010-75647029 | Msa0473170:CDS | 40.0% | |
| ATTGGATTCGCTCTTAGGTT+TGG | + | chr3_3:75647015-75647034 | Msa0473170:CDS | 40.0% | |
| TTCTTTGTCCTGGAAGCTTA+AGG | - | chr3_3:75647062-75647081 | None:intergenic | 40.0% | |
| TAAGCTTCCAGGACAAAGAA+TGG | + | chr3_3:75647062-75647081 | Msa0473170:CDS | 40.0% | |
| AAGCTTCCAGGACAAAGAAT+GGG | + | chr3_3:75647063-75647082 | Msa0473170:CDS | 40.0% | |
| GATGTTCCTATTCCTGCATT+TGG | + | chr3_3:75647153-75647172 | Msa0473170:CDS | 40.0% | |
| ! | GATTTTCCAGTACCAAATGC+AGG | - | chr3_3:75647168-75647187 | None:intergenic | 40.0% |
| ! | GCATCAAATTGTGGTGATGA+GGG | - | chr3_3:75647294-75647313 | None:intergenic | 40.0% |
| ! | AGCATCAAATTGTGGTGATG+AGG | - | chr3_3:75647295-75647314 | None:intergenic | 40.0% |
| GGATGAAAGAAAGTCTGACT+CGG | - | chr3_3:75647408-75647427 | None:intergenic | 40.0% | |
| TCATCATTCATGTCAGTCTC+GGG | - | chr3_3:75647745-75647764 | None:intergenic | 40.0% | |
| CTCATCATTCATGTCAGTCT+CGG | - | chr3_3:75647746-75647765 | None:intergenic | 40.0% | |
| ! | ATCTTCCTTTGAGAGCTCAA+AGG | - | chr3_3:75647779-75647798 | None:intergenic | 40.0% |
| TTGCCAATGCTTGAAAGAAC+AGG | - | chr3_3:75647805-75647824 | None:intergenic | 40.0% | |
| ! | TTTGAGGCGATGAAGAATTC+TGG | - | chr3_3:75647864-75647883 | None:intergenic | 40.0% |
| ATCCCTGAAAGAACTGAGTT+TGG | + | chr3_3:75647918-75647937 | Msa0473170:CDS | 40.0% | |
| TCCCTGAAAGAACTGAGTTT+GGG | + | chr3_3:75647919-75647938 | Msa0473170:CDS | 40.0% | |
| TCCCAAACTCAGTTCTTTCA+GGG | - | chr3_3:75647923-75647942 | None:intergenic | 40.0% | |
| TTCCCAAACTCAGTTCTTTC+AGG | - | chr3_3:75647924-75647943 | None:intergenic | 40.0% | |
| AGAACTGAGTTTGGGAACAA+AGG | + | chr3_3:75647927-75647946 | Msa0473170:CDS | 40.0% | |
| GGGAACAAAGGATCAGAAAA+AGG | + | chr3_3:75647939-75647958 | Msa0473170:CDS | 40.0% | |
| CTTTGTTCCCAATGTCTTAG+AGG | - | chr3_3:75647980-75647999 | None:intergenic | 40.0% | |
| !! | CTCTAAGACATTGGGAACAA+AGG | + | chr3_3:75647978-75647997 | Msa0473170:CDS | 40.0% |
| AGACATTGGGAACAAAGGAT+CGG | + | chr3_3:75647983-75648002 | Msa0473170:CDS | 40.0% | |
| AAGGATCGGAAAAAGGATTC+CGG | + | chr3_3:75647997-75648016 | Msa0473170:CDS | 40.0% | |
| GAATGGTAATCTGGTGGAAG+CGG | - | chr3_3:75642834-75642853 | None:intergenic | 45.0% | |
| CTTCCACCAGATTACCATTC+CGG | + | chr3_3:75642834-75642853 | Msa0473170:five_prime_UTR | 45.0% | |
| GATCACGATTCTGTCTACCT+TGG | + | chr3_3:75642864-75642883 | Msa0473170:five_prime_UTR | 45.0% | |
| ! | GCCTATACCTGTTTTGTAGC+TGG | + | chr3_3:75643268-75643287 | Msa0473170:intron | 45.0% |
| ACAACTTGAGTGAGGTTGTG+AGG | - | chr3_3:75643647-75643666 | None:intergenic | 45.0% | |
| GTATGCTCACAACTTGAGTG+AGG | - | chr3_3:75643655-75643674 | None:intergenic | 45.0% | |
| ACAAATTCGAGCTGAAGGGT+TGG | - | chr3_3:75643720-75643739 | None:intergenic | 45.0% | |
| GGACACAAATTCGAGCTGAA+GGG | - | chr3_3:75643724-75643743 | None:intergenic | 45.0% | |
| CTTCAGCTCGAATTTGTGTC+CGG | + | chr3_3:75643723-75643742 | Msa0473170:intron | 45.0% | |
| AACACTGAACCGACACAAGT+AGG | - | chr3_3:75643752-75643771 | None:intergenic | 45.0% | |
| ! | GAACAGCTGTTGGTTAAGCA+AGG | - | chr3_3:75644032-75644051 | None:intergenic | 45.0% |
| CATCCATTGAGAACAGCTGT+TGG | - | chr3_3:75644042-75644061 | None:intergenic | 45.0% | |
| ACAGCTGTTCTCAATGGATG+AGG | + | chr3_3:75644042-75644061 | Msa0473170:CDS | 45.0% | |
| TCTCAATGGATGAGGAGCTT+TGG | + | chr3_3:75644050-75644069 | Msa0473170:CDS | 45.0% | |
| ! | GGATGAGGAGCTTTGGTTTA+TGG | + | chr3_3:75644057-75644076 | Msa0473170:CDS | 45.0% |
| !! | TTTCTGAGGCGAACAGAAAG+AGG | + | chr3_3:75644128-75644147 | Msa0473170:CDS | 45.0% |
| TTTGTTCAGAGGCTGATTGG+AGG | + | chr3_3:75644160-75644179 | Msa0473170:CDS | 45.0% | |
| AGGCTGATTGGAGGTTACTA+TGG | + | chr3_3:75644169-75644188 | Msa0473170:CDS | 45.0% | |
| GGCTGATTGGAGGTTACTAT+GGG | + | chr3_3:75644170-75644189 | Msa0473170:CDS | 45.0% | |
| GCTGATTGGAGGTTACTATG+GGG | + | chr3_3:75644171-75644190 | Msa0473170:CDS | 45.0% | |
| CTGATTGGAGGTTACTATGG+GGG | + | chr3_3:75644172-75644191 | Msa0473170:CDS | 45.0% | |
| ACCTTCGATTGTTGTAGGAG+TGG | + | chr3_3:75644233-75644252 | Msa0473170:intron | 45.0% | |
| CCTTCGATTGTTGTAGGAGT+GGG | + | chr3_3:75644234-75644253 | Msa0473170:intron | 45.0% | |
| GAAGTGCATGGTGTAAAGGA+AGG | - | chr3_3:75644404-75644423 | None:intergenic | 45.0% | |
| ! | TGAGGAAGTGCATGGTGTAA+AGG | - | chr3_3:75644408-75644427 | None:intergenic | 45.0% |
| ! | TCAAGGTATGAGGAAGTGCA+TGG | - | chr3_3:75644416-75644435 | None:intergenic | 45.0% |
| CACCTTTACAAGGTATGGGA+GGG | - | chr3_3:75644580-75644599 | None:intergenic | 45.0% | |
| CATACAACAAATACGTGCGC+AGG | + | chr3_3:75645076-75645095 | Msa0473170:CDS | 45.0% | |
| ATGTTTGGCAATTGGACTGC+AGG | + | chr3_3:75645474-75645493 | Msa0473170:intron | 45.0% | |
| GAGTCCAGCCATCTGATTAA+AGG | - | chr3_3:75645545-75645564 | None:intergenic | 45.0% | |
| AGCAAAGCCTGAATATGAGC+AGG | - | chr3_3:75646115-75646134 | None:intergenic | 45.0% | |
| !! | TCTCAGGTTGACCAACTTGT+CGG | + | chr3_3:75646162-75646181 | Msa0473170:intron | 45.0% |
| ! | CATGGTTTTTCCCGACAAGT+TGG | - | chr3_3:75646176-75646195 | None:intergenic | 45.0% |
| CATGGTGTGCACCAAGAATT+CGG | - | chr3_3:75646248-75646267 | None:intergenic | 45.0% | |
| CAACTGCATATGTTGAGAGC+AGG | - | chr3_3:75646272-75646291 | None:intergenic | 45.0% | |
| ACCTGCTAGTAGCAGTAGTT+CGG | - | chr3_3:75646430-75646449 | None:intergenic | 45.0% | |
| !! | GCAGGTGCTGTACAGATTTT+TGG | + | chr3_3:75646444-75646463 | Msa0473170:intron | 45.0% |
| TCCTCCCTACCAGAAATTGT+TGG | + | chr3_3:75646529-75646548 | Msa0473170:CDS | 45.0% | |
| !! | ACCAACAATTTCTGGTAGGG+AGG | - | chr3_3:75646533-75646552 | None:intergenic | 45.0% |
| AATGGGGCTGCATAAGTCAT+TGG | + | chr3_3:75646560-75646579 | Msa0473170:intron | 45.0% | |
| GCAGAGAAATCAGAATGCGA+TGG | + | chr3_3:75646645-75646664 | Msa0473170:intron | 45.0% | |
| GAGAAATCAGAATGCGATGG+AGG | + | chr3_3:75646648-75646667 | Msa0473170:intron | 45.0% | |
| AAATTCACGAGGCGAAGTCT+CGG | - | chr3_3:75646739-75646758 | None:intergenic | 45.0% | |
| TTGCTAGTGACAAATGCGTC+TGG | + | chr3_3:75646927-75646946 | Msa0473170:intron | 45.0% | |
| TGCTAGTGACAAATGCGTCT+GGG | + | chr3_3:75646928-75646947 | Msa0473170:intron | 45.0% | |
| ! | ACCTTTTACCTTTGTCCTGC+AGG | + | chr3_3:75646979-75646998 | Msa0473170:intron | 45.0% |
| GTAAATTGCCTGCAGGACAA+AGG | - | chr3_3:75646990-75647009 | None:intergenic | 45.0% | |
| !! | GTTTGGTGCTCGAAAGCTTA+AGG | + | chr3_3:75647032-75647051 | Msa0473170:CDS | 45.0% |
| AAGGAGATCCTTAAGCTTCC+AGG | + | chr3_3:75647051-75647070 | Msa0473170:CDS | 45.0% | |
| CCAGTACCAAATGCAGGAAT+AGG | - | chr3_3:75647162-75647181 | None:intergenic | 45.0% | |
| CCTATTCCTGCATTTGGTAC+TGG | + | chr3_3:75647159-75647178 | Msa0473170:CDS | 45.0% | |
| AACTGTCACAGTCTCCAACA+AGG | - | chr3_3:75647203-75647222 | None:intergenic | 45.0% | |
| GGAGACTGTGACAGTTACTA+TGG | + | chr3_3:75647207-75647226 | Msa0473170:CDS | 45.0% | |
| GACTGTGACAGTTACTATGG+CGG | + | chr3_3:75647210-75647229 | Msa0473170:CDS | 45.0% | |
| ! | AATTGTGGTGATGAGGGACT+GGG | - | chr3_3:75647288-75647307 | None:intergenic | 45.0% |
| ! | AAATTGTGGTGATGAGGGAC+TGG | - | chr3_3:75647289-75647308 | None:intergenic | 45.0% |
| TGCTTGCACCACAACAAAAC+TGG | + | chr3_3:75647346-75647365 | Msa0473170:CDS | 45.0% | |
| AGGGACTTACATACCTGACA+TGG | + | chr3_3:75647485-75647504 | Msa0473170:CDS | 45.0% | |
| CTCAGACTCTTACTACCTAC+TGG | + | chr3_3:75647587-75647606 | Msa0473170:intron | 45.0% | |
| ! | CTTTGAGAGCTCAAAGGACT+TGG | - | chr3_3:75647773-75647792 | None:intergenic | 45.0% |
| CAAGTCCTTTGAGCTCTCAA+AGG | + | chr3_3:75647771-75647790 | Msa0473170:intron | 45.0% | |
| AGCATCTCATCAATCTGAGC+AGG | + | chr3_3:75647837-75647856 | Msa0473170:CDS | 45.0% | |
| GGGAACAAAGGATCGGAAAA+AGG | + | chr3_3:75647990-75648009 | Msa0473170:CDS | 45.0% | |
| CTACACCAGTTGTTCCAAGT+CGG | + | chr3_3:75648043-75648062 | Msa0473170:CDS | 45.0% | |
| TACACCAGTTGTTCCAAGTC+GGG | + | chr3_3:75648044-75648063 | Msa0473170:CDS | 45.0% | |
| ! | AGGCAAAGGAGAAGTGTACT+CGG | + | chr3_3:75648073-75648092 | Msa0473170:CDS | 45.0% |
| ! | AAAGGAGAAGTGTACTCGGA+TGG | + | chr3_3:75648077-75648096 | Msa0473170:CDS | 45.0% |
| TACTCGGATGGAGAAGAAGA+TGG | + | chr3_3:75648089-75648108 | Msa0473170:CDS | 45.0% | |
| ACTCGGATGGAGAAGAAGAT+GGG | + | chr3_3:75648090-75648109 | Msa0473170:CDS | 45.0% | |
| !! | TATAAAAATTTAATGTAAAT+GGG | - | chr3_3:75645805-75645824 | None:intergenic | 5.0% |
| !! | ATATAAAAATTTAATGTAAA+TGG | - | chr3_3:75645806-75645825 | None:intergenic | 5.0% |
| !!! | TTTTTTTAAAAAAAATTCAA+TGG | - | chr3_3:75646089-75646108 | None:intergenic | 5.0% |
| ACAATTCCGGGTTCGTGTGT+CGG | - | chr3_3:75642741-75642760 | None:intergenic | 50.0% | |
| TGCGTCTTCCTCACAATTCC+GGG | - | chr3_3:75642753-75642772 | None:intergenic | 50.0% | |
| GTGCGTCTTCCTCACAATTC+CGG | - | chr3_3:75642754-75642773 | None:intergenic | 50.0% | |
| GTGAGGAAGACGCACAGAAT+CGG | + | chr3_3:75642759-75642778 | Msa0473170:five_prime_UTR | 50.0% | |
| AACTCGCCGGAATGGTAATC+TGG | - | chr3_3:75642843-75642862 | None:intergenic | 50.0% | |
| AGATTACCATTCCGGCGAGT+TGG | + | chr3_3:75642842-75642861 | Msa0473170:five_prime_UTR | 50.0% | |
| AGAATCGTGATCCAACTCGC+CGG | - | chr3_3:75642856-75642875 | None:intergenic | 50.0% | |
| ! | TGGTTTGGAGCTAGGGTTTC+TGG | + | chr3_3:75643155-75643174 | Msa0473170:intron | 50.0% |
| CAGCAGTCCAGCTACAAAAC+AGG | - | chr3_3:75643278-75643297 | None:intergenic | 50.0% | |
| ! | CTGTTTTGTAGCTGGACTGC+TGG | + | chr3_3:75643276-75643295 | Msa0473170:intron | 50.0% |
| GTGATCCAGCGTGTTTGTTC+TGG | + | chr3_3:75643578-75643597 | Msa0473170:intron | 50.0% | |
| AGGTGGAGCAACTGAGATAG+GGG | - | chr3_3:75643627-75643646 | None:intergenic | 50.0% | |
| GAGGTGGAGCAACTGAGATA+GGG | - | chr3_3:75643628-75643647 | None:intergenic | 50.0% | |
| TGAGGTGGAGCAACTGAGAT+AGG | - | chr3_3:75643629-75643648 | None:intergenic | 50.0% | |
| ACTTGAGTGAGGTTGTGAGG+TGG | - | chr3_3:75643644-75643663 | None:intergenic | 50.0% | |
| CGGACACAAATTCGAGCTGA+AGG | - | chr3_3:75643725-75643744 | None:intergenic | 50.0% | |
| AACCGACACAAGTAGGACAC+CGG | - | chr3_3:75643745-75643764 | None:intergenic | 50.0% | |
| CCCACTCCTACAACAATCGA+AGG | - | chr3_3:75644237-75644256 | None:intergenic | 50.0% | |
| CTTTACAAGGTATGGGAGGG+AGG | - | chr3_3:75644577-75644596 | None:intergenic | 50.0% | |
| CTCCCTCCCATACCTTGTAA+AGG | + | chr3_3:75644575-75644594 | Msa0473170:intron | 50.0% | |
| GCACCTTTACAAGGTATGGG+AGG | - | chr3_3:75644581-75644600 | None:intergenic | 50.0% | |
| TGGCAATTGGACTGCAGGTA+AGG | + | chr3_3:75645479-75645498 | Msa0473170:intron | 50.0% | |
| GGCAATTGGACTGCAGGTAA+GGG | + | chr3_3:75645480-75645499 | Msa0473170:intron | 50.0% | |
| ACTCTATGCTCTGCGCTTTC+TGG | + | chr3_3:75645561-75645580 | Msa0473170:CDS | 50.0% | |
| TGTAGGAATGGAAGGGGAAG+GGG | - | chr3_3:75645898-75645917 | None:intergenic | 50.0% | |
| CTGTAGGAATGGAAGGGGAA+GGG | - | chr3_3:75645899-75645918 | None:intergenic | 50.0% | |
| ACTGTAGGAATGGAAGGGGA+AGG | - | chr3_3:75645900-75645919 | None:intergenic | 50.0% | |
| !! | CTCAGGTTGACCAACTTGTC+GGG | + | chr3_3:75646163-75646182 | Msa0473170:intron | 50.0% |
| TCGGCTCTCATAATAGCACC+AGG | - | chr3_3:75646229-75646248 | None:intergenic | 50.0% | |
| ! | CGAATTCTTGGTGCACACCA+TGG | + | chr3_3:75646246-75646265 | Msa0473170:CDS | 50.0% |
| CATATGTTGAGAGCAGGCCA+TGG | - | chr3_3:75646266-75646285 | None:intergenic | 50.0% | |
| TGCTAGTAGCAGTAGTTCGG+TGG | - | chr3_3:75646427-75646446 | None:intergenic | 50.0% | |
| ACCGAACTACTGCTACTAGC+AGG | + | chr3_3:75646426-75646445 | Msa0473170:intron | 50.0% | |
| !! | CGACAAGCAGGTTGGTATCA+AGG | - | chr3_3:75646626-75646645 | None:intergenic | 50.0% |
| TTTCTCTGCGACAAGCAGGT+TGG | - | chr3_3:75646634-75646653 | None:intergenic | 50.0% | |
| CTGATTTCTCTGCGACAAGC+AGG | - | chr3_3:75646638-75646657 | None:intergenic | 50.0% | |
| GCCTGCAGGACAAAGGTAAA+AGG | - | chr3_3:75646983-75647002 | None:intergenic | 50.0% | |
| CTTCCAGGACAAAGAATGGG+TGG | + | chr3_3:75647066-75647085 | Msa0473170:CDS | 50.0% | |
| ! | AAGAATGGGTGGAGCACTTG+AGG | + | chr3_3:75647077-75647096 | Msa0473170:CDS | 50.0% |
| TCTGAAGAGCCTGTCCTTGT+TGG | + | chr3_3:75647186-75647205 | Msa0473170:CDS | 50.0% | |
| TCACAGTCTCCAACAAGGAC+AGG | - | chr3_3:75647198-75647217 | None:intergenic | 50.0% | |
| GTTGGCTGTGGAGGAACATT+CGG | - | chr3_3:75647429-75647448 | None:intergenic | 50.0% | |
| GTTCCTCCACAGCCAACTTA+TGG | + | chr3_3:75647432-75647451 | Msa0473170:CDS | 50.0% | |
| ! | TCAAGGCCATAAGTTGGCTG+TGG | - | chr3_3:75647441-75647460 | None:intergenic | 50.0% |
| TCATTCATGTCAGTCTCGGG+AGG | - | chr3_3:75647742-75647761 | None:intergenic | 50.0% | |
| GATCGGAAAAAGGATTCCGG+TGG | + | chr3_3:75648000-75648019 | Msa0473170:CDS | 50.0% | |
| TCCGGTGGTTCATCCTCTAA+AGG | + | chr3_3:75648015-75648034 | Msa0473170:CDS | 50.0% | |
| ! | GCCTTTAGAGGATGAACCAC+CGG | - | chr3_3:75648019-75648038 | None:intergenic | 50.0% |
| TGGTGTAGTAGCGCCTTTAG+AGG | - | chr3_3:75648031-75648050 | None:intergenic | 50.0% | |
| !! | AATGCCCGACTTGGAACAAC+TGG | - | chr3_3:75648051-75648070 | None:intergenic | 50.0% |
| CAATTCCGGGTTCGTGTGTC+GGG | - | chr3_3:75642740-75642759 | None:intergenic | 55.0% | |
| CACACGAACCCGGAATTGTG+AGG | + | chr3_3:75642742-75642761 | Msa0473170:five_prime_UTR | 55.0% | |
| AACGGTGGAATCGAGCGTCT+CGG | - | chr3_3:75642785-75642804 | None:intergenic | 55.0% | |
| ! | ACCGTTCCCACTCGTTTTCG+CGG | + | chr3_3:75642799-75642818 | Msa0473170:five_prime_UTR | 55.0% |
| GAATCGCCGCGAAAACGAGT+GGG | - | chr3_3:75642808-75642827 | None:intergenic | 55.0% | |
| ! | ACTCGTTTTCGCGGCGATTC+CGG | + | chr3_3:75642808-75642827 | Msa0473170:five_prime_UTR | 55.0% |
| TCGCCGGAATGGTAATCTGG+TGG | - | chr3_3:75642840-75642859 | None:intergenic | 55.0% | |
| GTCCGGTGTCCTACTTGTGT+CGG | + | chr3_3:75643740-75643759 | Msa0473170:intron | 55.0% | |
| TTATGGCTGAAGAGAGGGCC+CGG | + | chr3_3:75644074-75644093 | Msa0473170:CDS | 55.0% | |
| TGGAGGTTACTATGGGGGAG+AGG | + | chr3_3:75644177-75644196 | Msa0473170:CDS | 55.0% | |
| TACAAGGTATGGGAGGGAGG+TGG | - | chr3_3:75644574-75644593 | None:intergenic | 55.0% | |
| GGTAGGGAGGATAAGGCTTG+TGG | - | chr3_3:75646520-75646539 | None:intergenic | 55.0% | |
| CTTTGTTGACACTGCGGCCT+AGG | - | chr3_3:75646809-75646828 | None:intergenic | 55.0% | |
| CTAGGCCGCAGTGTCAACAA+AGG | + | chr3_3:75646807-75646826 | Msa0473170:CDS | 55.0% | |
| GTGACAAATGCGTCTGGGCT+TGG | + | chr3_3:75646933-75646952 | Msa0473170:intron | 55.0% | |
| GCTCCACCCATTCTTTGTCC+TGG | - | chr3_3:75647072-75647091 | None:intergenic | 55.0% | |
| ! | AGGCCATAAGTTGGCTGTGG+AGG | - | chr3_3:75647438-75647457 | None:intergenic | 55.0% |
| TTGGCATGGACCCTCTTGCA+CGG | - | chr3_3:75647618-75647637 | None:intergenic | 55.0% | |
| ! | TGTTCCAAGTCGGGCATTGC+AGG | + | chr3_3:75648053-75648072 | Msa0473170:CDS | 55.0% |
| TTTGCCTGCAATGCCCGACT+TGG | - | chr3_3:75648060-75648079 | None:intergenic | 55.0% | |
| ! | AAGTCGGGCATTGCAGGCAA+AGG | + | chr3_3:75648059-75648078 | Msa0473170:CDS | 55.0% |
| GCGAAAACGAGTGGGAACGG+TGG | - | chr3_3:75642800-75642819 | None:intergenic | 60.0% | |
| GCCGCGAAAACGAGTGGGAA+CGG | - | chr3_3:75642803-75642822 | None:intergenic | 60.0% | |
| GGAATCGCCGCGAAAACGAG+TGG | - | chr3_3:75642809-75642828 | None:intergenic | 60.0% | |
| GGTAATCTGGTGGAAGCGGC+CGG | - | chr3_3:75642830-75642849 | None:intergenic | 60.0% | |
| CGTGATCCAACTCGCCGGAA+TGG | - | chr3_3:75642851-75642870 | None:intergenic | 60.0% | |
| TATGGCTGAAGAGAGGGCCC+GGG | + | chr3_3:75644075-75644094 | Msa0473170:CDS | 60.0% | |
| TATGGGAGGGAGGTGGTTGG+GGG | - | chr3_3:75644567-75644586 | None:intergenic | 60.0% | |
| GTATGGGAGGGAGGTGGTTG+GGG | - | chr3_3:75644568-75644587 | None:intergenic | 60.0% | |
| GGTATGGGAGGGAGGTGGTT+GGG | - | chr3_3:75644569-75644588 | None:intergenic | 60.0% | |
| AGGTATGGGAGGGAGGTGGT+TGG | - | chr3_3:75644570-75644589 | None:intergenic | 60.0% | |
| !! | TGCTCTGCGCTTTCTGGAGC+AGG | + | chr3_3:75645567-75645586 | Msa0473170:CDS | 60.0% |
| ATCAGTGCGCGGTCCTCTAG+AGG | + | chr3_3:75646329-75646348 | Msa0473170:CDS | 60.0% | |
| GGCGAAGTCTCGGATGCCTT+TGG | - | chr3_3:75646729-75646748 | None:intergenic | 60.0% | |
| TCTTGCACGGGCGTTCCAGT+AGG | - | chr3_3:75647605-75647624 | None:intergenic | 60.0% | |
| TACTGGAACGCCCGTGCAAG+AGG | + | chr3_3:75647604-75647623 | Msa0473170:intron | 60.0% | |
| ACTGGAACGCCCGTGCAAGA+GGG | + | chr3_3:75647605-75647624 | Msa0473170:intron | 60.0% | |
| TGGCATGGACCCTCTTGCAC+GGG | - | chr3_3:75647617-75647636 | None:intergenic | 60.0% | |
| GTGCAAGAGGGTCCATGCCA+AGG | + | chr3_3:75647617-75647636 | Msa0473170:intron | 60.0% | |
| ACGGCTGGATCTCCTTGGCA+TGG | - | chr3_3:75647632-75647651 | None:intergenic | 60.0% | |
| TTCGCACGGCTGGATCTCCT+TGG | - | chr3_3:75647637-75647656 | None:intergenic | 60.0% | |
| GCCAACCCGACACACGAACC+CGG | + | chr3_3:75642732-75642751 | Msa0473170:five_prime_UTR | 65.0% | |
| TCCGGGTTCGTGTGTCGGGT+TGG | - | chr3_3:75642736-75642755 | None:intergenic | 65.0% | |
| GGGAGGTGGTTGGGGGCTTT+AGG | - | chr3_3:75644560-75644579 | None:intergenic | 65.0% | |
| GGACTGGGCTGTGCAACGAG+CGG | - | chr3_3:75647273-75647292 | None:intergenic | 65.0% | |
| !! | CGTGTGTCGGGTTGGCGACC+CGG | - | chr3_3:75642728-75642747 | None:intergenic | 70.0% |
| GGGCTGTGCAACGAGCGGCA+TGG | - | chr3_3:75647268-75647287 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 75642472 | 75648116 | 75642472 | ID=Msa0473170;Name=Msa0473170 |
| chr3_3 | mRNA | 75642472 | 75648116 | 75642472 | ID=Msa0473170-mRNA-1;Parent=Msa0473170;Name=Msa0473170-mRNA-1;_AED=0.34;_eAED=0.34;_QI=466|0.87|0.88|1|0.87|0.77|9|0|595 |
| chr3_3 | exon | 75642472 | 75642910 | 75642472 | ID=Msa0473170-mRNA-1:exon:19669;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75643968 | 75644198 | 75643968 | ID=Msa0473170-mRNA-1:exon:19670;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75644921 | 75645097 | 75644921 | ID=Msa0473170-mRNA-1:exon:19671;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75645496 | 75645588 | 75645496 | ID=Msa0473170-mRNA-1:exon:19672;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75646168 | 75646350 | 75646168 | ID=Msa0473170-mRNA-1:exon:19673;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75646448 | 75646550 | 75646448 | ID=Msa0473170-mRNA-1:exon:19674;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75646649 | 75646828 | 75646649 | ID=Msa0473170-mRNA-1:exon:19675;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75647001 | 75647506 | 75647001 | ID=Msa0473170-mRNA-1:exon:19676;Parent=Msa0473170-mRNA-1 |
| chr3_3 | exon | 75647775 | 75648116 | 75647775 | ID=Msa0473170-mRNA-1:exon:19677;Parent=Msa0473170-mRNA-1 |
| chr3_3 | five_prime_UTR | 75642472 | 75642910 | 75642472 | ID=Msa0473170-mRNA-1:five_prime_utr;Parent=Msa0473170-mRNA-1 |
| chr3_3 | five_prime_UTR | 75643968 | 75643994 | 75643968 | ID=Msa0473170-mRNA-1:five_prime_utr;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75643995 | 75644198 | 75643995 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75644921 | 75645097 | 75644921 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75645496 | 75645588 | 75645496 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75646168 | 75646350 | 75646168 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75646448 | 75646550 | 75646448 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75646649 | 75646828 | 75646649 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75647001 | 75647506 | 75647001 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| chr3_3 | CDS | 75647775 | 75648116 | 75647775 | ID=Msa0473170-mRNA-1:cds;Parent=Msa0473170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
