Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378200 | XP_003602637.1 | 98.986 | 789 | 8 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1618 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378200 | sp|Q8L7V3|PMTQ_ARATH | 64.551 | 835 | 242 | 9 | 1 | 788 | 1 | 828 | 0.0 | 1103 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378200 | G7JC39 | 98.986 | 789 | 8 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1618 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0378200 | Msa1462630 | 0.822016 | 2.967710e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378200 | MtrunA17_Chr3g0130381 | 98.986 | 789 | 8 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1618 |
Msa0378200 | MtrunA17_Chr8g0384431 | 71.655 | 822 | 178 | 9 | 1 | 788 | 1 | 801 | 0.0 | 1215 |
Msa0378200 | MtrunA17_Chr3g0125511 | 57.412 | 796 | 289 | 12 | 1 | 788 | 1 | 754 | 0.0 | 944 |
Msa0378200 | MtrunA17_Chr8g0372471 | 56.088 | 731 | 279 | 8 | 76 | 778 | 176 | 892 | 0.0 | 851 |
Msa0378200 | MtrunA17_Chr5g0437501 | 52.941 | 544 | 238 | 4 | 242 | 778 | 75 | 607 | 0.0 | 630 |
Msa0378200 | MtrunA17_Chr3g0113981 | 54.685 | 523 | 222 | 5 | 257 | 779 | 164 | 671 | 0.0 | 609 |
Msa0378200 | MtrunA17_Chr1g0155141 | 50.662 | 529 | 239 | 5 | 252 | 778 | 193 | 701 | 0.0 | 592 |
Msa0378200 | MtrunA17_Chr5g0404771 | 49.570 | 581 | 218 | 10 | 1 | 513 | 1 | 574 | 2.04e-176 | 519 |
Msa0378200 | MtrunA17_Chr1g0159741 | 49.307 | 505 | 238 | 10 | 258 | 755 | 141 | 634 | 7.10e-171 | 508 |
Msa0378200 | MtrunA17_Chr3g0112341 | 48.089 | 497 | 242 | 8 | 268 | 759 | 162 | 647 | 2.22e-169 | 504 |
Msa0378200 | MtrunA17_Chr5g0435751 | 43.219 | 553 | 268 | 12 | 221 | 759 | 79 | 599 | 1.64e-153 | 461 |
Msa0378200 | MtrunA17_Chr1g0167381 | 45.941 | 542 | 253 | 16 | 268 | 787 | 101 | 624 | 6.36e-151 | 455 |
Msa0378200 | MtrunA17_Chr1g0183721 | 45.880 | 534 | 255 | 14 | 268 | 781 | 71 | 590 | 4.76e-149 | 449 |
Msa0378200 | MtrunA17_Chr8g0350351 | 42.830 | 523 | 266 | 12 | 268 | 776 | 97 | 600 | 3.18e-144 | 437 |
Msa0378200 | MtrunA17_Chr4g0055031 | 44.526 | 548 | 265 | 16 | 248 | 776 | 76 | 603 | 1.34e-142 | 433 |
Msa0378200 | MtrunA17_Chr1g0187601 | 43.561 | 528 | 266 | 11 | 268 | 776 | 100 | 614 | 3.54e-142 | 432 |
Msa0378200 | MtrunA17_Chr7g0246681 | 40.917 | 545 | 286 | 12 | 248 | 777 | 65 | 588 | 2.06e-141 | 429 |
Msa0378200 | MtrunA17_Chr5g0404761 | 63.958 | 283 | 98 | 2 | 501 | 783 | 1 | 279 | 5.10e-140 | 414 |
Msa0378200 | MtrunA17_Chr8g0388881 | 41.869 | 535 | 277 | 14 | 261 | 776 | 101 | 620 | 7.34e-138 | 421 |
Msa0378200 | MtrunA17_Chr6g0472571 | 42.561 | 531 | 265 | 16 | 268 | 776 | 114 | 626 | 1.01e-137 | 421 |
Msa0378200 | MtrunA17_Chr5g0409411 | 42.509 | 534 | 268 | 14 | 268 | 781 | 81 | 595 | 1.51e-136 | 417 |
Msa0378200 | MtrunA17_Chr8g0369481 | 41.856 | 528 | 270 | 12 | 268 | 776 | 79 | 588 | 2.13e-136 | 416 |
Msa0378200 | MtrunA17_Chr1g0203741 | 41.696 | 566 | 290 | 18 | 234 | 776 | 69 | 617 | 9.96e-136 | 416 |
Msa0378200 | MtrunA17_Chr7g0214551 | 44.650 | 486 | 245 | 8 | 286 | 756 | 68 | 544 | 8.75e-135 | 411 |
Msa0378200 | MtrunA17_Chr8g0361791 | 42.077 | 549 | 278 | 18 | 247 | 776 | 73 | 600 | 1.77e-132 | 407 |
Msa0378200 | MtrunA17_Chr8g0350391 | 41.002 | 539 | 278 | 16 | 268 | 782 | 114 | 636 | 7.57e-131 | 403 |
Msa0378200 | MtrunA17_Chr7g0246701 | 40.426 | 564 | 292 | 19 | 244 | 782 | 87 | 631 | 2.21e-129 | 400 |
Msa0378200 | MtrunA17_Chr5g0416991 | 41.935 | 527 | 268 | 14 | 268 | 776 | 93 | 599 | 1.44e-128 | 397 |
Msa0378200 | MtrunA17_Chr3g0092501 | 41.760 | 534 | 270 | 16 | 268 | 783 | 94 | 604 | 1.74e-127 | 394 |
Msa0378200 | MtrunA17_Chr1g0171781 | 39.626 | 535 | 271 | 15 | 268 | 776 | 95 | 603 | 7.04e-116 | 363 |
Msa0378200 | MtrunA17_Chr5g0426281 | 33.100 | 571 | 311 | 18 | 247 | 777 | 132 | 671 | 1.02e-90 | 299 |
Msa0378200 | MtrunA17_Chr3g0115931 | 33.522 | 531 | 282 | 17 | 292 | 777 | 185 | 689 | 1.73e-85 | 286 |
Msa0378200 | MtrunA17_Chr4g0043131 | 46.853 | 143 | 70 | 3 | 634 | 770 | 36 | 178 | 8.45e-38 | 139 |
Msa0378200 | MtrunA17_Chr4g0043121 | 30.892 | 314 | 190 | 10 | 268 | 566 | 95 | 396 | 3.19e-37 | 145 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0378200 | AT5G64030.1 | 64.551 | 835 | 242 | 9 | 1 | 788 | 1 | 828 | 0.0 | 1103 |
Msa0378200 | AT1G29470.1 | 64.304 | 790 | 261 | 10 | 1 | 789 | 1 | 770 | 0.0 | 1035 |
Msa0378200 | AT1G29470.2 | 64.304 | 790 | 261 | 10 | 1 | 789 | 1 | 770 | 0.0 | 1035 |
Msa0378200 | AT2G34300.2 | 60.853 | 797 | 277 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1003 |
Msa0378200 | AT2G34300.3 | 60.853 | 797 | 277 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1003 |
Msa0378200 | AT2G34300.1 | 60.853 | 797 | 277 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1003 |
Msa0378200 | AT3G51070.1 | 62.446 | 695 | 240 | 4 | 95 | 782 | 215 | 895 | 0.0 | 940 |
Msa0378200 | AT3G51070.1 | 35.028 | 177 | 89 | 6 | 1 | 155 | 1 | 173 | 3.32e-17 | 87.0 |
Msa0378200 | AT3G51070.2 | 63.158 | 627 | 210 | 4 | 95 | 714 | 215 | 827 | 0.0 | 856 |
Msa0378200 | AT3G51070.2 | 35.028 | 177 | 89 | 6 | 1 | 155 | 1 | 173 | 3.62e-17 | 86.7 |
Msa0378200 | AT2G40280.1 | 50.342 | 584 | 264 | 8 | 203 | 782 | 26 | 587 | 0.0 | 619 |
Msa0378200 | AT3G56080.1 | 53.818 | 537 | 227 | 7 | 243 | 778 | 94 | 610 | 0.0 | 607 |
Msa0378200 | AT1G19430.1 | 41.130 | 761 | 382 | 13 | 21 | 778 | 27 | 724 | 0.0 | 596 |
Msa0378200 | AT1G19430.3 | 41.130 | 761 | 382 | 13 | 21 | 778 | 27 | 724 | 0.0 | 596 |
Msa0378200 | AT3G56080.2 | 55.180 | 473 | 195 | 6 | 243 | 714 | 94 | 550 | 0.0 | 553 |
Msa0378200 | AT5G06050.1 | 46.154 | 559 | 264 | 15 | 224 | 759 | 99 | 643 | 1.02e-172 | 513 |
Msa0378200 | AT1G77260.1 | 44.784 | 556 | 278 | 10 | 217 | 755 | 88 | 631 | 4.97e-171 | 508 |
Msa0378200 | AT2G39750.1 | 48.491 | 497 | 240 | 9 | 268 | 759 | 186 | 671 | 5.57e-171 | 509 |
Msa0378200 | AT4G14360.1 | 45.527 | 503 | 245 | 12 | 268 | 756 | 85 | 572 | 3.60e-146 | 442 |
Msa0378200 | AT4G14360.2 | 45.527 | 503 | 245 | 12 | 268 | 756 | 85 | 572 | 3.60e-146 | 442 |
Msa0378200 | AT3G23300.2 | 44.195 | 534 | 263 | 13 | 268 | 781 | 88 | 606 | 4.17e-146 | 442 |
Msa0378200 | AT3G23300.1 | 44.195 | 534 | 263 | 13 | 268 | 781 | 88 | 606 | 4.17e-146 | 442 |
Msa0378200 | AT4G00740.1 | 41.954 | 522 | 270 | 10 | 270 | 777 | 92 | 594 | 9.34e-144 | 436 |
Msa0378200 | AT4G00740.2 | 41.954 | 522 | 270 | 10 | 270 | 777 | 92 | 594 | 9.34e-144 | 436 |
Msa0378200 | AT1G04430.1 | 45.365 | 507 | 240 | 14 | 268 | 756 | 93 | 580 | 1.21e-142 | 434 |
Msa0378200 | AT1G04430.3 | 45.365 | 507 | 240 | 14 | 268 | 756 | 93 | 580 | 1.21e-142 | 434 |
Msa0378200 | AT1G04430.2 | 45.365 | 507 | 240 | 14 | 268 | 756 | 93 | 580 | 1.21e-142 | 434 |
Msa0378200 | AT1G31850.1 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 4.03e-141 | 429 |
Msa0378200 | AT1G31850.2 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 4.03e-141 | 429 |
Msa0378200 | AT1G31850.4 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 4.03e-141 | 429 |
Msa0378200 | AT1G31850.3 | 42.617 | 535 | 258 | 15 | 268 | 776 | 85 | 596 | 4.03e-141 | 429 |
Msa0378200 | AT4G10440.1 | 41.007 | 556 | 293 | 14 | 241 | 776 | 76 | 616 | 5.96e-140 | 427 |
Msa0378200 | AT1G33170.1 | 41.367 | 556 | 292 | 13 | 241 | 776 | 93 | 634 | 1.39e-139 | 426 |
Msa0378200 | AT4G19120.1 | 42.351 | 536 | 258 | 15 | 268 | 776 | 79 | 590 | 2.98e-138 | 422 |
Msa0378200 | AT4G19120.2 | 42.351 | 536 | 258 | 15 | 268 | 776 | 79 | 590 | 2.98e-138 | 422 |
Msa0378200 | AT5G14430.1 | 45.941 | 505 | 240 | 13 | 268 | 756 | 89 | 576 | 3.98e-136 | 417 |
Msa0378200 | AT1G26850.2 | 42.724 | 536 | 272 | 15 | 268 | 783 | 95 | 615 | 9.21e-136 | 416 |
Msa0378200 | AT1G26850.1 | 42.724 | 536 | 272 | 15 | 268 | 783 | 95 | 615 | 9.21e-136 | 416 |
Msa0378200 | AT1G19430.2 | 36.551 | 632 | 336 | 12 | 21 | 650 | 27 | 595 | 4.77e-134 | 411 |
Msa0378200 | AT5G14430.2 | 45.347 | 505 | 243 | 13 | 268 | 756 | 89 | 576 | 7.53e-134 | 410 |
Msa0378200 | AT2G45750.1 | 41.882 | 542 | 262 | 19 | 271 | 788 | 99 | 611 | 1.94e-132 | 408 |
Msa0378200 | AT4G00750.1 | 41.051 | 514 | 260 | 18 | 290 | 776 | 125 | 622 | 7.81e-127 | 393 |
Msa0378200 | AT2G43200.2 | 42.188 | 512 | 264 | 14 | 268 | 764 | 100 | 594 | 2.51e-126 | 391 |
Msa0378200 | AT2G43200.1 | 42.188 | 512 | 264 | 14 | 268 | 764 | 100 | 594 | 2.51e-126 | 391 |
Msa0378200 | AT4G18030.1 | 41.590 | 541 | 274 | 15 | 257 | 776 | 84 | 603 | 2.97e-126 | 391 |
Msa0378200 | AT5G04060.1 | 41.935 | 527 | 267 | 12 | 268 | 776 | 92 | 597 | 1.07e-125 | 389 |
Msa0378200 | AT3G10200.1 | 41.288 | 528 | 271 | 15 | 268 | 776 | 81 | 588 | 5.68e-123 | 382 |
Msa0378200 | AT3G10200.2 | 41.365 | 498 | 256 | 14 | 268 | 749 | 81 | 558 | 3.06e-116 | 364 |
Msa0378200 | AT4G19120.3 | 42.247 | 445 | 209 | 14 | 268 | 688 | 79 | 499 | 1.30e-107 | 338 |
Msa0378200 | AT1G26850.3 | 41.204 | 432 | 216 | 14 | 268 | 684 | 95 | 503 | 9.56e-93 | 300 |
Msa0378200 | AT1G78240.1 | 31.053 | 570 | 325 | 18 | 247 | 773 | 132 | 676 | 3.57e-84 | 282 |
Msa0378200 | AT1G78240.2 | 31.053 | 570 | 325 | 18 | 247 | 773 | 132 | 676 | 3.57e-84 | 282 |
Msa0378200 | AT1G13860.4 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 6.11e-79 | 266 |
Msa0378200 | AT1G13860.3 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 6.11e-79 | 266 |
Msa0378200 | AT1G13860.1 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 6.11e-79 | 266 |
Msa0378200 | AT1G13860.5 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 6.11e-79 | 266 |
Msa0378200 | AT1G13860.2 | 36.779 | 416 | 218 | 14 | 384 | 773 | 46 | 442 | 3.74e-74 | 248 |
Msa0378200 | AT2G03480.2 | 34.221 | 526 | 294 | 17 | 269 | 773 | 96 | 590 | 9.38e-74 | 252 |
Msa0378200 | AT2G03480.1 | 33.647 | 532 | 300 | 17 | 269 | 773 | 96 | 601 | 4.57e-73 | 250 |
Msa0378200 | AT2G03480.3 | 32.166 | 314 | 184 | 10 | 269 | 566 | 96 | 396 | 1.44e-33 | 134 |
Find 258 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGAAAGATTTGAATATT+TGG | 0.164392 | 3_1:+78943034 | Msa0378200:CDS |
TGCAGGTGGTAAACTTCTTT+TGG | 0.230174 | 3_1:+78941947 | Msa0378200:intron |
CAGCCGGAACCCAAGCATTT+TGG | 0.243862 | 3_1:-78943546 | None:intergenic |
CTTAGCCGCATGTGTTTCTT+TGG | 0.274924 | 3_1:+78938333 | Msa0378200:five_prime_UTR |
CTCATTTGAACTCTGGTCTT+TGG | 0.275650 | 3_1:-78939861 | None:intergenic |
TTTATGCAACTGAATATATA+TGG | 0.276535 | 3_1:+78943832 | Msa0378200:three_prime_UTR |
GGATAGTGGCTTCTTGTATA+TGG | 0.279107 | 3_1:-78942224 | None:intergenic |
AAGACCCCGTTCATAAATAA+TGG | 0.282831 | 3_1:-78943097 | None:intergenic |
CTCTAGCCTTGATTGGGGTT+TGG | 0.283882 | 3_1:+78939324 | Msa0378200:CDS |
CGATCCGAAGACATGGCTTT+AGG | 0.286464 | 3_1:+78939230 | Msa0378200:exon |
TCAGGAAGCTTCTGATAAAT+AGG | 0.293202 | 3_1:-78942020 | None:intergenic |
TAGGCCGCCAGGTGGACTTC+TGG | 0.299464 | 3_1:-78943474 | None:intergenic |
TTCCATATTTCAACATCTTC+AGG | 0.299746 | 3_1:-78942038 | None:intergenic |
TTATCAGCAGCAAAATCTTC+AGG | 0.304087 | 3_1:-78942802 | None:intergenic |
ATCAGCAAGGATCAAGTTAA+TGG | 0.304469 | 3_1:+78942190 | Msa0378200:CDS |
TTTGTTGCTCTAGCCTTGAT+TGG | 0.306385 | 3_1:+78939317 | Msa0378200:CDS |
AAGTTAAGGGGCATCAAAAT+TGG | 0.309838 | 3_1:+78940328 | Msa0378200:CDS |
GACTCTGCCTGACATTGCTT+GGG | 0.309960 | 3_1:+78941286 | Msa0378200:intron |
AGGCAGGTGGGAGGTTCTTC+AGG | 0.312570 | 3_1:-78940127 | None:intergenic |
GGGAAATATTCTAGAGTAGA+TGG | 0.314502 | 3_1:+78939251 | Msa0378200:CDS |
TGAGCTTCATGTTCATCCTT+TGG | 0.318842 | 3_1:-78941404 | None:intergenic |
TTATCCCATGCCTTGACAAC+TGG | 0.320818 | 3_1:+78940047 | Msa0378200:CDS |
TTTGAAAGATTTGAATATTT+GGG | 0.321547 | 3_1:+78943035 | Msa0378200:CDS |
CACTAAGCTTGCTGAAGTTA+AGG | 0.329223 | 3_1:+78940314 | Msa0378200:CDS |
TTCCTGAAGATGTTGAAATA+TGG | 0.348064 | 3_1:+78942036 | Msa0378200:CDS |
CCTTCCCATTATTTATGAAC+GGG | 0.357509 | 3_1:+78943092 | Msa0378200:CDS |
TCAAATGAGGTATTCCCTTC+CGG | 0.367877 | 3_1:+78939875 | Msa0378200:CDS |
TGGGAACTTGACAACCAATA+TGG | 0.368562 | 3_1:-78942754 | None:intergenic |
CTTTATTTATATTTAGAGAT+TGG | 0.369394 | 3_1:+78943670 | Msa0378200:three_prime_UTR |
CAAATGAGGTATTCCCTTCC+GGG | 0.376544 | 3_1:+78939876 | Msa0378200:CDS |
ATGGATATGAACTCAATCTA+TGG | 0.377899 | 3_1:+78942901 | Msa0378200:CDS |
AATGAAACTACGACACAAAC+TGG | 0.384495 | 3_1:+78939917 | Msa0378200:CDS |
CTTCTATAATATGGTGCCAT+AGG | 0.385741 | 3_1:+78943699 | Msa0378200:three_prime_UTR |
AGTTCCCAAGTTGGAGTCTA+TGG | 0.386840 | 3_1:+78942769 | Msa0378200:CDS |
TTGTTGCTCTAGCCTTGATT+GGG | 0.386986 | 3_1:+78939318 | Msa0378200:CDS |
ATAGAGCGCTTATATCCTTC+AGG | 0.387610 | 3_1:-78940160 | None:intergenic |
AGACTCTGCCTGACATTGCT+TGG | 0.390574 | 3_1:+78941285 | Msa0378200:intron |
GATCCGAAGACATGGCTTTA+GGG | 0.392712 | 3_1:+78939231 | Msa0378200:exon |
CCGCGTTCACTTGAACTAAC+TGG | 0.395097 | 3_1:-78942688 | None:intergenic |
CAATCTCTAAATATAAATAA+AGG | 0.395280 | 3_1:-78943669 | None:intergenic |
TTTGACAGTGTGTGAATGTT+GGG | 0.397887 | 3_1:-78938580 | None:intergenic |
CCTCCAAGACTGGGTACAAT+TGG | 0.405008 | 3_1:+78939993 | Msa0378200:CDS |
ACAAAGAGGCTTCCCTTCCC+TGG | 0.407202 | 3_1:+78941479 | Msa0378200:CDS |
CTCTGTCTCCTTAGGCCGCC+AGG | 0.410259 | 3_1:-78943485 | None:intergenic |
GAAGTGCCCCATGCTTGAAT+TGG | 0.410323 | 3_1:-78940395 | None:intergenic |
ATGCCAAAATGCTTGGGTTC+CGG | 0.415442 | 3_1:+78943543 | Msa0378200:three_prime_UTR |
ATTCAAGAGTCCTCCAAGAC+TGG | 0.418254 | 3_1:+78939983 | Msa0378200:CDS |
CAAGTCTTATCTAAACGGAT+TGG | 0.419452 | 3_1:+78942849 | Msa0378200:CDS |
CCTGCTATATCTGCTGTAAT+GGG | 0.421591 | 3_1:+78941455 | Msa0378200:CDS |
TCCTGCTATATCTGCTGTAA+TGG | 0.421692 | 3_1:+78941454 | Msa0378200:CDS |
GGAGGAGAGGGAGTGACTTA+AGG | 0.422154 | 3_1:-78938403 | None:intergenic |
CATTAACAAAATCAATATGC+TGG | 0.424608 | 3_1:+78942155 | Msa0378200:CDS |
GGTACATTGGTCAGCCTGGC+TGG | 0.424736 | 3_1:-78942733 | None:intergenic |
GAGATTCGAAATTGAGAGAA+AGG | 0.427817 | 3_1:-78938605 | None:intergenic |
GGCTGACCAATGTACCATAT+TGG | 0.427892 | 3_1:+78942740 | Msa0378200:CDS |
AGACCCCGTTCATAAATAAT+GGG | 0.428891 | 3_1:-78943096 | None:intergenic |
CAGATGCAATCTAGCTTCTC+TGG | 0.430244 | 3_1:+78943300 | Msa0378200:intron |
ACTAAGCTTGCTGAAGTTAA+GGG | 0.433369 | 3_1:+78940315 | Msa0378200:CDS |
GGATGAGATGCCAAAATGCT+TGG | 0.435994 | 3_1:+78943536 | Msa0378200:three_prime_UTR |
TTGACAACTGGAAAGCGATT+AGG | 0.436526 | 3_1:+78940059 | Msa0378200:CDS |
TTTCCAATTGTACCCAGTCT+TGG | 0.437033 | 3_1:-78939996 | None:intergenic |
TAATTGAGTAGTTATTGATC+AGG | 0.441245 | 3_1:+78939185 | Msa0378200:intron |
TCATAACAATCATTGGATAG+TGG | 0.441820 | 3_1:-78942238 | None:intergenic |
TCGTTGCTCATAACAATCAT+TGG | 0.446283 | 3_1:-78942245 | None:intergenic |
CTGAGGTTGATCGGATTCTC+AGG | 0.448079 | 3_1:+78943326 | Msa0378200:CDS |
GGCCAGAAAAGTGGCCAGCC+AGG | 0.448570 | 3_1:+78942719 | Msa0378200:CDS |
GTGTCCAAGTCTTATCTAAA+CGG | 0.458820 | 3_1:+78942844 | Msa0378200:CDS |
TCAAGGCATGGGATAAAGTC+GGG | 0.458938 | 3_1:-78940040 | None:intergenic |
CAATCCGTTTAGATAAGACT+TGG | 0.459235 | 3_1:-78942848 | None:intergenic |
AACTAAACTCTCTCTTCCTT+CGG | 0.459892 | 3_1:+78938541 | Msa0378200:five_prime_UTR |
GAAGGAATACCATGCTGCAT+TGG | 0.460905 | 3_1:-78942308 | None:intergenic |
CTCTGGTAGCTGAGGTTGAT+CGG | 0.463097 | 3_1:+78943317 | Msa0378200:CDS |
AAGGAATACCATGCTGCATT+GGG | 0.465896 | 3_1:-78942307 | None:intergenic |
AGGTTCAATTTGCTCTTGAG+AGG | 0.466968 | 3_1:+78941426 | Msa0378200:CDS |
AAGTCTTATCTAAACGGATT+GGG | 0.468240 | 3_1:+78942850 | Msa0378200:CDS |
CCAATTGTACCCAGTCTTGG+AGG | 0.469573 | 3_1:-78939993 | None:intergenic |
AGTTATTTAATCAGAAACTT+TGG | 0.470180 | 3_1:+78938501 | Msa0378200:five_prime_UTR |
TTGAGTGTCTCTGTCTCCTT+AGG | 0.471291 | 3_1:-78943493 | None:intergenic |
AAAGAGAAAGCCTCCGAAGC+TGG | 0.471336 | 3_1:-78941351 | None:intergenic |
TGAAAAGAAAGATGAATCAG+AGG | 0.472280 | 3_1:+78939691 | Msa0378200:CDS |
CAGCGAAGAGGCGTCTACTA+AGG | 0.476422 | 3_1:+78939649 | Msa0378200:CDS |
CGGACAATAAGCTTTCCTTC+AGG | 0.478801 | 3_1:-78943349 | None:intergenic |
TTTCCCTAAAGCCATGTCTT+CGG | 0.479516 | 3_1:-78939234 | None:intergenic |
TAGTTAAGGGCCGGAGGAGA+GGG | 0.480840 | 3_1:-78938415 | None:intergenic |
GGATGTGGAGTTGCCAGCTT+CGG | 0.480928 | 3_1:+78941338 | Msa0378200:CDS |
AGTTAAGGGGCATCAAAATT+GGG | 0.484810 | 3_1:+78940329 | Msa0378200:CDS |
GGAAAGCGATTAGGAGTCTT+CGG | 0.484828 | 3_1:+78940068 | Msa0378200:CDS |
CCCTTCCCATTATTTATGAA+CGG | 0.488962 | 3_1:+78943091 | Msa0378200:CDS |
GCAAAACGAGGACGTGCCTC+AGG | 0.493277 | 3_1:+78939376 | Msa0378200:CDS |
ATCAGATTTCCCTCACCCTA+TGG | 0.494214 | 3_1:-78943715 | None:intergenic |
GGAGAACAACAAGTCTGATT+CGG | 0.494783 | 3_1:+78939712 | Msa0378200:CDS |
CAAAGAAACACATGCGGCTA+AGG | 0.495484 | 3_1:-78938332 | None:intergenic |
GCAACTGAATATATATGGAT+TGG | 0.496597 | 3_1:+78943837 | Msa0378200:three_prime_UTR |
GAGGGAGTGACTTAAGGAAG+AGG | 0.496847 | 3_1:-78938397 | None:intergenic |
GTTTGACAGTGTGTGAATGT+TGG | 0.496984 | 3_1:-78938581 | None:intergenic |
CTGAAGGAAAGCTTATTGTC+CGG | 0.497261 | 3_1:+78943350 | Msa0378200:CDS |
TAACAAACCCTCCTTATCCT+TGG | 0.499118 | 3_1:-78943446 | None:intergenic |
AGAGTTCCATGGCACATTGA+AGG | 0.500328 | 3_1:+78941536 | Msa0378200:CDS |
CTGAATATATATGGATTGGA+CGG | 0.501522 | 3_1:+78943841 | Msa0378200:three_prime_UTR |
AAGTACAGTATTCAACATTC+AGG | 0.508604 | 3_1:-78943879 | None:intergenic |
ATCAAATACTCTCCCAGGGA+AGG | 0.510333 | 3_1:-78941492 | None:intergenic |
CATGACCTACTCCAAGGATA+AGG | 0.511195 | 3_1:+78943435 | Msa0378200:CDS |
GAAGTCCACCTGGCGGCCTA+AGG | 0.514851 | 3_1:+78943477 | Msa0378200:CDS |
TTCTATAATATGGTGCCATA+GGG | 0.515066 | 3_1:+78943700 | Msa0378200:three_prime_UTR |
ATGGAGGAGATCATATGTCC+TGG | 0.515095 | 3_1:-78943163 | None:intergenic |
AAGTGCCCCATGCTTGAATT+GGG | 0.517462 | 3_1:-78940394 | None:intergenic |
GATGAGATGCCAAAATGCTT+GGG | 0.518499 | 3_1:+78943537 | Msa0378200:three_prime_UTR |
TTGAATTGGGTTCCACCACC+AGG | 0.519299 | 3_1:-78940381 | None:intergenic |
AGCAGAGTCAAAGAATGAAA+AGG | 0.519819 | 3_1:+78939958 | Msa0378200:CDS |
CAAAATTGGGTGAAAGTCAC+GGG | 0.519884 | 3_1:+78940342 | Msa0378200:CDS |
GCTTTCCAGTTGTCAAGGCA+TGG | 0.520419 | 3_1:-78940052 | None:intergenic |
TAATATGGTGCCATAGGGTG+AGG | 0.521259 | 3_1:+78943705 | Msa0378200:three_prime_UTR |
AGATAGTAATGTAGAGGAGA+AGG | 0.521421 | 3_1:+78939775 | Msa0378200:CDS |
AAAGGATGAACATGAAGCTC+AGG | 0.523572 | 3_1:+78941406 | Msa0378200:CDS |
AAAGTTTGTAATGTTACTGC+TGG | 0.523799 | 3_1:+78940016 | Msa0378200:CDS |
TGCAATGTCACTTGCACCAA+AGG | 0.524307 | 3_1:+78941388 | Msa0378200:CDS |
TATCAGCAGCAAAATCTTCA+GGG | 0.525199 | 3_1:-78942801 | None:intergenic |
TCAAAATTGGGTGAAAGTCA+CGG | 0.525244 | 3_1:+78940341 | Msa0378200:CDS |
TTCAATTTGCTCTTGAGAGG+GGG | 0.525841 | 3_1:+78941429 | Msa0378200:CDS |
GTGGAACCCAATTCAAGCAT+GGG | 0.531941 | 3_1:+78940388 | Msa0378200:CDS |
GGTTCAATTTGCTCTTGAGA+GGG | 0.532634 | 3_1:+78941427 | Msa0378200:CDS |
TGCCTTGTCTCTCTTCCTGA+AGG | 0.535020 | 3_1:+78940145 | Msa0378200:CDS |
TGTTTGCCCCAAGCAATGTC+AGG | 0.536368 | 3_1:-78941293 | None:intergenic |
AAGGATCAAGTTAATGGAGT+TGG | 0.537672 | 3_1:+78942196 | Msa0378200:CDS |
GCAGCAAAATCTTCAGGGGC+CGG | 0.538266 | 3_1:-78942796 | None:intergenic |
CAAAGAGGCTTCCCTTCCCT+GGG | 0.538740 | 3_1:+78941480 | Msa0378200:CDS |
TTAAGTCACTCCCTCTCCTC+CGG | 0.539629 | 3_1:+78938405 | Msa0378200:five_prime_UTR |
CATCATCCAAACCCCAATCA+AGG | 0.540492 | 3_1:-78939330 | None:intergenic |
ACTGCATCAAATACTCTCCC+AGG | 0.541601 | 3_1:-78941497 | None:intergenic |
CGGCAGTTTGAAGATAATCC+TGG | 0.544215 | 3_1:+78939470 | Msa0378200:CDS |
CATTAACGAGCTTGAGAGCA+TGG | 0.545161 | 3_1:+78943387 | Msa0378200:CDS |
AATGTCTCCCTCAGTCCTCA+TGG | 0.546910 | 3_1:+78938371 | Msa0378200:five_prime_UTR |
ATATGGTACATTGGTCAGCC+TGG | 0.547368 | 3_1:-78942737 | None:intergenic |
ATATAAAATAAATAAATCAA+TGG | 0.548632 | 3_1:-78943760 | None:intergenic |
TGAAGGAAAGCTTATTGTCC+GGG | 0.549044 | 3_1:+78943351 | Msa0378200:CDS |
TTACATTGACTTTATACAAG+AGG | 0.550306 | 3_1:+78940419 | Msa0378200:CDS |
AAATGATATATGACTAGTAG+TGG | 0.551153 | 3_1:-78943595 | None:intergenic |
ATTAACAAAATCAATATGCT+GGG | 0.551786 | 3_1:+78942156 | Msa0378200:CDS |
TTGCCTGAGGATGCGACCAA+GGG | 0.553259 | 3_1:+78939497 | Msa0378200:CDS |
TGGTTGTCAAGTTCCCAAGT+TGG | 0.553335 | 3_1:+78942760 | Msa0378200:CDS |
GGAATACCTCATTTGAACTC+TGG | 0.553898 | 3_1:-78939868 | None:intergenic |
TAGCAAGAAGCAGATCTAAG+AGG | 0.553942 | 3_1:-78938674 | None:intergenic |
CTTTCCAGTTGTCAAGGCAT+GGG | 0.554013 | 3_1:-78940051 | None:intergenic |
GGTCACAGTGGCCAGAAAAG+TGG | 0.554071 | 3_1:+78942710 | Msa0378200:CDS |
TGAATATATATGGATTGGAC+GGG | 0.554603 | 3_1:+78943842 | Msa0378200:three_prime_UTR |
TGTGGAGTTGCCAGCTTCGG+AGG | 0.557116 | 3_1:+78941341 | Msa0378200:CDS |
CCCATTACAGCAGATATAGC+AGG | 0.558260 | 3_1:-78941455 | None:intergenic |
CAGATCTAAGAGGAAGATGA+AGG | 0.561247 | 3_1:-78938664 | None:intergenic |
GGTAAGAAAACAGAAGATGA+AGG | 0.565006 | 3_1:+78939602 | Msa0378200:CDS |
GAATTCAGTGGTCAAATGTA+CGG | 0.565252 | 3_1:+78942872 | Msa0378200:CDS |
CCCGTTCATAAATAATGGGA+AGG | 0.566248 | 3_1:-78943092 | None:intergenic |
AGCTCAGACTGAGCCCCGGA+AGG | 0.566755 | 3_1:-78939890 | None:intergenic |
GTCAAGGCATGGGATAAAGT+CGG | 0.567476 | 3_1:-78940041 | None:intergenic |
AATATTCTAGAGTAGATGGT+AGG | 0.569169 | 3_1:+78939255 | Msa0378200:CDS |
GATCGGATTCTCAGGCCTGA+AGG | 0.569364 | 3_1:+78943334 | Msa0378200:CDS |
CTGAACAGAGTATTGCGGCC+TGG | 0.570629 | 3_1:+78941972 | Msa0378200:CDS |
AGTTGGAGTCTATGGTAAGC+CGG | 0.573432 | 3_1:+78942777 | Msa0378200:CDS |
ACACGTGTTATACTAGATGT+TGG | 0.575962 | 3_1:+78941317 | Msa0378200:CDS |
GAGATCATATGTCCTGGGAT+AGG | 0.577862 | 3_1:-78943157 | None:intergenic |
GGTGGAACCCAATTCAAGCA+TGG | 0.579009 | 3_1:+78940387 | Msa0378200:CDS |
ATAGTTAAGGGCCGGAGGAG+AGG | 0.579248 | 3_1:-78938416 | None:intergenic |
TCTAGCTTCTCTGGTAGCTG+AGG | 0.579746 | 3_1:+78943309 | Msa0378200:CDS |
TAATCGCTTTCCAGTTGTCA+AGG | 0.579902 | 3_1:-78940057 | None:intergenic |
TAGTAATGTAGAGGAGAAGG+TGG | 0.580767 | 3_1:+78939778 | Msa0378200:CDS |
CATGCGAACCTCCCACTGCA+TGG | 0.581028 | 3_1:-78943416 | None:intergenic |
TCAAATACTCTCCCAGGGAA+GGG | 0.581519 | 3_1:-78941491 | None:intergenic |
GCATCCTCAGGCAAATCACC+AGG | 0.581534 | 3_1:-78939488 | None:intergenic |
AGGAAGAGAGACAAGGCAGG+TGG | 0.585497 | 3_1:-78940140 | None:intergenic |
TGAATACCTTCAATGTGCCA+TGG | 0.585774 | 3_1:-78941542 | None:intergenic |
TATTGTCCGGGACACTGTTG+AGG | 0.586039 | 3_1:+78943363 | Msa0378200:CDS |
GTGAGGTCGATCCGAAGACA+TGG | 0.587047 | 3_1:+78939223 | Msa0378200:exon |
CTTCCCATTATTTATGAACG+GGG | 0.587916 | 3_1:+78943093 | Msa0378200:CDS |
CTTACCATAGACTCCAACTT+GGG | 0.588345 | 3_1:-78942773 | None:intergenic |
TGACAACCAATATGGTACAT+TGG | 0.589602 | 3_1:-78942746 | None:intergenic |
CAAAGACCAGAGTTCAAATG+AGG | 0.590021 | 3_1:+78939862 | Msa0378200:CDS |
GTTATACTAGATGTTGGATG+TGG | 0.591044 | 3_1:+78941323 | Msa0378200:CDS |
GACCTACTCCAAGGATAAGG+AGG | 0.591238 | 3_1:+78943438 | Msa0378200:CDS |
TTCAAGAGTCCTCCAAGACT+GGG | 0.592523 | 3_1:+78939984 | Msa0378200:CDS |
GATATGAACTCAATCTATGG+AGG | 0.592603 | 3_1:+78942904 | Msa0378200:CDS |
GCTCAGACTGAGCCCCGGAA+GGG | 0.594249 | 3_1:-78939889 | None:intergenic |
AGAGGAAACCATGAGGACTG+AGG | 0.594667 | 3_1:-78938379 | None:intergenic |
TGTAGTTCCCGTGCAAAACG+AGG | 0.595256 | 3_1:+78939364 | Msa0378200:CDS |
TGGAGGAGATCATATGTCCT+GGG | 0.597705 | 3_1:-78943162 | None:intergenic |
TTGCTGCTGATAATAAACAC+TGG | 0.598168 | 3_1:+78942812 | Msa0378200:CDS |
GTCAAATGTACGGAATGTCA+TGG | 0.602207 | 3_1:+78942882 | Msa0378200:CDS |
GTGCACGTTGTAGAGTTCCA+TGG | 0.602530 | 3_1:+78941525 | Msa0378200:CDS |
CTAAGCTTGCTGAAGTTAAG+GGG | 0.603146 | 3_1:+78940316 | Msa0378200:CDS |
GGAAGAGAGACAAGGCAGGT+GGG | 0.603261 | 3_1:-78940139 | None:intergenic |
TAATGACCTCAACAGTGTCC+CGG | 0.603316 | 3_1:-78943369 | None:intergenic |
TGTCAGCTCCGAAGAGAAGT+CGG | 0.604687 | 3_1:+78939529 | Msa0378200:CDS |
GCTTACCATAGACTCCAACT+TGG | 0.604957 | 3_1:-78942774 | None:intergenic |
GAAGGAACAGACTGAGGTGA+GGG | 0.605363 | 3_1:+78939415 | Msa0378200:CDS |
GAGGAAACCATGAGGACTGA+GGG | 0.605447 | 3_1:-78938378 | None:intergenic |
ATTCTGATTTAAATAGCCGA+AGG | 0.605888 | 3_1:-78938557 | None:intergenic |
GATATAAGCGCTCTATTGAG+TGG | 0.606444 | 3_1:+78940167 | Msa0378200:CDS |
TTTGCCTGAGGATGCGACCA+AGG | 0.606923 | 3_1:+78939496 | Msa0378200:CDS |
GTTCAATTTGCTCTTGAGAG+GGG | 0.608000 | 3_1:+78941428 | Msa0378200:CDS |
AGTATGCTATTGTTTAAGCA+CGG | 0.608753 | 3_1:+78943515 | Msa0378200:exon |
TTCAGGAAGAGAGACAAGGC+AGG | 0.609303 | 3_1:-78940143 | None:intergenic |
GGAACTTGTTTCAATCAGCA+AGG | 0.612001 | 3_1:+78942177 | Msa0378200:CDS |
TGGAGCTGAACAGAGTATTG+CGG | 0.613676 | 3_1:+78941967 | Msa0378200:CDS |
AACAACAGATAGTAATGTAG+AGG | 0.614483 | 3_1:+78939769 | Msa0378200:CDS |
AATCATTTAGCACCTATCCC+AGG | 0.615139 | 3_1:+78943145 | Msa0378200:CDS |
AAATGAGGTATTCCCTTCCG+GGG | 0.618479 | 3_1:+78939877 | Msa0378200:CDS |
AATATGGTGCCATAGGGTGA+GGG | 0.618599 | 3_1:+78943706 | Msa0378200:three_prime_UTR |
CCAGTTAGTTCAAGTGAACG+CGG | 0.619426 | 3_1:+78942688 | Msa0378200:CDS |
TGAAGGAACAGACTGAGGTG+AGG | 0.620122 | 3_1:+78939414 | Msa0378200:CDS |
TGTTGCTCTAGCCTTGATTG+GGG | 0.623280 | 3_1:+78939319 | Msa0378200:CDS |
GTGGCCTAAAAGCAGAGAGA+AGG | 0.623669 | 3_1:+78940186 | Msa0378200:CDS |
CATGGTAAAGTCCATGCAGT+GGG | 0.624917 | 3_1:+78943405 | Msa0378200:CDS |
GAACTCTACAACGTGCACAA+TGG | 0.628195 | 3_1:-78941520 | None:intergenic |
TTGAAAAGAGATGATCTGCA+TGG | 0.628694 | 3_1:-78943182 | None:intergenic |
TAGAAGCTCAGACTGAGCCC+CGG | 0.630651 | 3_1:-78939894 | None:intergenic |
ACTTCAGCAAGCTTAGTGTG+TGG | 0.630986 | 3_1:-78940309 | None:intergenic |
ATATCAAAATTAATGACCAA+AGG | 0.631627 | 3_1:-78943646 | None:intergenic |
CTGCTGTAATGGGCACAAAG+AGG | 0.637182 | 3_1:+78941465 | Msa0378200:CDS |
CTGCATCAAATACTCTCCCA+GGG | 0.637623 | 3_1:-78941496 | None:intergenic |
GAAGTCGGAGGAAAATTCCA+CGG | 0.637764 | 3_1:+78939544 | Msa0378200:CDS |
ACTCTGCCTGACATTGCTTG+GGG | 0.639154 | 3_1:+78941287 | Msa0378200:CDS |
GAAGATGTTGAAATATGGAA+TGG | 0.639298 | 3_1:+78942041 | Msa0378200:CDS |
CCGTTCATAAATAATGGGAA+GGG | 0.642519 | 3_1:-78943091 | None:intergenic |
GCTTCTTGCTATAGAACCAG+AGG | 0.645455 | 3_1:+78938686 | Msa0378200:five_prime_UTR |
CTGATGATCCCAATGCAGCA+TGG | 0.648087 | 3_1:+78942299 | Msa0378200:CDS |
AAACTGATAATAGCAATGCT+CGG | 0.648882 | 3_1:+78939450 | Msa0378200:CDS |
ATATGAACTCAATCTATGGA+GGG | 0.649955 | 3_1:+78942905 | Msa0378200:CDS |
GGTTCGCATGACCTACTCCA+AGG | 0.652153 | 3_1:+78943429 | Msa0378200:CDS |
CAAGTGAACGCGGGTCACAG+TGG | 0.652261 | 3_1:+78942698 | Msa0378200:CDS |
ACCTACTCCAAGGATAAGGA+GGG | 0.652538 | 3_1:+78943439 | Msa0378200:CDS |
AGAGAGACAAGGCAGGTGGG+AGG | 0.652823 | 3_1:-78940136 | None:intergenic |
TATGTGTCCAGAAGTCCACC+TGG | 0.655480 | 3_1:+78943467 | Msa0378200:CDS |
AAAGAATCTGATGAAAACGC+TGG | 0.656465 | 3_1:+78939815 | Msa0378200:CDS |
AACAGAGTATTGCGGCCTGG+TGG | 0.656543 | 3_1:+78941975 | Msa0378200:CDS |
GGTAAAGTCCATGCAGTGGG+AGG | 0.657793 | 3_1:+78943408 | Msa0378200:CDS |
GCATGGTAAAGTCCATGCAG+TGG | 0.661920 | 3_1:+78943404 | Msa0378200:CDS |
TAAACGGATTGGGAATTCAG+TGG | 0.664896 | 3_1:+78942860 | Msa0378200:CDS |
ACCCTCCTTATCCTTGGAGT+AGG | 0.669418 | 3_1:-78943440 | None:intergenic |
CAAGGCATGGGATAAAGTCG+GGG | 0.669765 | 3_1:-78940039 | None:intergenic |
CAGTTAGTTCAAGTGAACGC+GGG | 0.672917 | 3_1:+78942689 | Msa0378200:CDS |
ATCAGCAGCAAAATCTTCAG+GGG | 0.674815 | 3_1:-78942800 | None:intergenic |
ATCCTTCAGGAAGAGAGACA+AGG | 0.675474 | 3_1:-78940147 | None:intergenic |
AATAATGGGAAGGGTATCTG+CGG | 0.678257 | 3_1:-78943082 | None:intergenic |
AAATAACAAAGACAGCGAAG+AGG | 0.679636 | 3_1:+78939637 | Msa0378200:CDS |
TGCCTGAGGATGCGACCAAG+GGG | 0.680547 | 3_1:+78939498 | Msa0378200:CDS |
TGGAACCCAATTCAAGCATG+GGG | 0.686380 | 3_1:+78940389 | Msa0378200:CDS |
GGTATAATTAATCATCTGTG+AGG | 0.690025 | 3_1:+78939206 | Msa0378200:five_prime_UTR |
TGAGGTGAAGGAACAGACTG+AGG | 0.690937 | 3_1:+78939409 | Msa0378200:CDS |
TGTCTCCTTAGGCCGCCAGG+TGG | 0.691172 | 3_1:-78943482 | None:intergenic |
AGATACGAAGACAGAAGACG+AGG | 0.694255 | 3_1:+78939580 | Msa0378200:CDS |
AAAAGAGATGATCTGCATGG+AGG | 0.700577 | 3_1:-78943179 | None:intergenic |
ATCTGAGCATTGTGTGAACG+CGG | 0.707613 | 3_1:-78938637 | None:intergenic |
ATCTTCAGAAGACTTCTCCG+TGG | 0.710231 | 3_1:-78939561 | None:intergenic |
GATACGAAGACAGAAGACGA+GGG | 0.710853 | 3_1:+78939581 | Msa0378200:CDS |
GTGTCCAGAAGTCCACCTGG+CGG | 0.714703 | 3_1:+78943470 | Msa0378200:CDS |
ACTAACCAAAGAAACACATG+CGG | 0.719248 | 3_1:-78938338 | None:intergenic |
CAGCTCCGAAGAGAAGTCGG+AGG | 0.726526 | 3_1:+78939532 | Msa0378200:CDS |
TAATCCTGGTGATTTGCCTG+AGG | 0.728544 | 3_1:+78939484 | Msa0378200:CDS |
GCCTGAGGATGCGACCAAGG+GGG | 0.732614 | 3_1:+78939499 | Msa0378200:CDS |
TTAAGGAAGAGGAAACCATG+AGG | 0.751869 | 3_1:-78938386 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTACTAAAAAATAGTTAA+GGG | - | chr3_1:78938431-78938450 | None:intergenic | 10.0% |
!! | AAATTACTAAAAAATAGTTA+AGG | - | chr3_1:78938432-78938451 | None:intergenic | 10.0% |
!!! | ATTTTTTCTTTTTCTTAAAA+GGG | - | chr3_1:78940591-78940610 | None:intergenic | 10.0% |
!!! | TATTTTTAACTTATTTTCGT+CGG | + | chr3_1:78938467-78938486 | Msa0378200:five_prime_UTR | 15.0% |
!!! | GAGAAATAACATATAATTTT+AGG | - | chr3_1:78940265-78940284 | None:intergenic | 15.0% |
!!! | GATTTTTTCTTTTTCTTAAA+AGG | - | chr3_1:78940592-78940611 | None:intergenic | 15.0% |
!!! | CTTTAAAAATCTGTTAATAT+TGG | + | chr3_1:78940627-78940646 | Msa0378200:intron | 15.0% |
!! | TGGAATGAAAAAAAATATTA+TGG | + | chr3_1:78940647-78940666 | Msa0378200:intron | 15.0% |
!! | TAGAAATCTAAAAAAAGTTT+AGG | - | chr3_1:78941197-78941216 | None:intergenic | 15.0% |
!!! | ATTTTGAATCATATTCATTT+AGG | + | chr3_1:78941612-78941631 | Msa0378200:intron | 15.0% |
!! | TGTTTAAATACATGTAAATA+AGG | - | chr3_1:78941912-78941931 | None:intergenic | 15.0% |
!!! | CAAAATCTAAATTTCTATTT+TGG | - | chr3_1:78942355-78942374 | None:intergenic | 15.0% |
!! | AACAAGTATAAAAATAAAAC+AGG | + | chr3_1:78942497-78942516 | Msa0378200:intron | 15.0% |
!! | ACAAGTATAAAAATAAAACA+GGG | + | chr3_1:78942498-78942517 | Msa0378200:intron | 15.0% |
!! | TTTGAAAGATTTGAATATTT+GGG | + | chr3_1:78943035-78943054 | Msa0378200:CDS | 15.0% |
!! | CAATCTCTAAATATAAATAA+AGG | - | chr3_1:78943672-78943691 | None:intergenic | 15.0% |
!!! | CTTTATTTATATTTAGAGAT+TGG | + | chr3_1:78943670-78943689 | Msa0378200:three_prime_UTR | 15.0% |
!! | AGTTATTTAATCAGAAACTT+TGG | + | chr3_1:78938501-78938520 | Msa0378200:five_prime_UTR | 20.0% |
!!! | CATTTTGTTTGGATTAAATT+TGG | + | chr3_1:78940446-78940465 | Msa0378200:intron | 20.0% |
!!! | ACAAGTTAAACAGAAATTTT+TGG | - | chr3_1:78940503-78940522 | None:intergenic | 20.0% |
!! | ATATATTGATCTTGAAAGTT+CGG | - | chr3_1:78940533-78940552 | None:intergenic | 20.0% |
!! | TATCATAATAAAGAGAAACT+TGG | - | chr3_1:78940747-78940766 | None:intergenic | 20.0% |
!! | TACATTAAAATGCACAAAAA+AGG | - | chr3_1:78942090-78942109 | None:intergenic | 20.0% |
!!! | TTTTTTGTGCATTTTAATGT+AGG | + | chr3_1:78942089-78942108 | Msa0378200:intron | 20.0% |
!! | ATTAACAAAATCAATATGCT+GGG | + | chr3_1:78942156-78942175 | Msa0378200:CDS | 20.0% |
!!! | CTTTGAAAGATTTGAATATT+TGG | + | chr3_1:78943034-78943053 | Msa0378200:CDS | 20.0% |
!!! | TTTTTGGTATATATCATGAT+TGG | + | chr3_1:78943118-78943137 | Msa0378200:CDS | 20.0% |
!!! | AGTCATATATCATTTTAGTT+AGG | + | chr3_1:78943603-78943622 | Msa0378200:three_prime_UTR | 20.0% |
!! | ATATCAAAATTAATGACCAA+AGG | - | chr3_1:78943649-78943668 | None:intergenic | 20.0% |
!!! | TATTTTATATGCGTAATAGT+CGG | + | chr3_1:78943773-78943792 | Msa0378200:three_prime_UTR | 20.0% |
!! | TTTATGCAACTGAATATATA+TGG | + | chr3_1:78943832-78943851 | Msa0378200:three_prime_UTR | 20.0% |
! | AATAAAATCGAACTAAGATG+CGG | - | chr3_1:78938886-78938905 | None:intergenic | 25.0% |
!! | AACGGTAAAAGTATAAGATA+TGG | - | chr3_1:78939035-78939054 | None:intergenic | 25.0% |
! | GTAAAGTTGAATCAGTAAAA+CGG | - | chr3_1:78939053-78939072 | None:intergenic | 25.0% |
! | TAAGACTTGAAACACAAATT+AGG | - | chr3_1:78939163-78939182 | None:intergenic | 25.0% |
! | TAATTGAGTAGTTATTGATC+AGG | + | chr3_1:78939185-78939204 | Msa0378200:intron | 25.0% |
!!! | GTCTTTGTTATTTTCTGTAT+TGG | - | chr3_1:78939630-78939649 | None:intergenic | 25.0% |
!!! | TTACATTGACTTTATACAAG+AGG | + | chr3_1:78940419-78940438 | Msa0378200:CDS | 25.0% |
!!! | ACAGATTTTTAAAGCTATAC+TGG | - | chr3_1:78940621-78940640 | None:intergenic | 25.0% |
! | TTTCTCTTTATTATGATACC+TGG | + | chr3_1:78940749-78940768 | Msa0378200:intron | 25.0% |
!! | ATCAATATCATGGTAAGTTT+TGG | - | chr3_1:78941099-78941118 | None:intergenic | 25.0% |
! | ATGAAGGTAAATCAATATCA+TGG | - | chr3_1:78941109-78941128 | None:intergenic | 25.0% |
! | TGTAGAAGATCATTTAATGA+AGG | - | chr3_1:78941125-78941144 | None:intergenic | 25.0% |
! | ATAATACATGTAAATGTCAC+TGG | + | chr3_1:78941683-78941702 | Msa0378200:intron | 25.0% |
!!! | TGTTTGTTATACAGCTATTT+TGG | + | chr3_1:78941710-78941729 | Msa0378200:intron | 25.0% |
! | AATCATGTTAACTAGGATAT+TGG | - | chr3_1:78941875-78941894 | None:intergenic | 25.0% |
! | ATCTAGTAATCATGTTAACT+AGG | - | chr3_1:78941882-78941901 | None:intergenic | 25.0% |
! | CATTAACAAAATCAATATGC+TGG | + | chr3_1:78942155-78942174 | Msa0378200:CDS | 25.0% |
!! | ATAAAACAGGGCTTTTTATT+TGG | + | chr3_1:78942510-78942529 | Msa0378200:intron | 25.0% |
!! | AACCAGCAAACTTTTTATTA+TGG | + | chr3_1:78943249-78943268 | Msa0378200:intron | 25.0% |
! | AACCATAATAAAAAGTTTGC+TGG | - | chr3_1:78943254-78943273 | None:intergenic | 25.0% |
! | AAATGATATATGACTAGTAG+TGG | - | chr3_1:78943598-78943617 | None:intergenic | 25.0% |
!! | TGGTGTTTTCTTCTATAATA+TGG | + | chr3_1:78943690-78943709 | Msa0378200:three_prime_UTR | 25.0% |
!! | ATTTTATATGCGTAATAGTC+GGG | + | chr3_1:78943774-78943793 | Msa0378200:three_prime_UTR | 25.0% |
!!! | ACTTGTACCTTTTTTAGTTT+TGG | + | chr3_1:78943898-78943917 | Msa0378200:three_prime_UTR | 25.0% |
ACTAAAAAATAGTTAAGGGC+CGG | - | chr3_1:78938427-78938446 | None:intergenic | 30.0% | |
ATTCTGATTTAAATAGCCGA+AGG | - | chr3_1:78938560-78938579 | None:intergenic | 30.0% | |
AAACAAGATTCGAATAAACG+CGG | - | chr3_1:78938784-78938803 | None:intergenic | 30.0% | |
! | AAATCACTATCTGAAACAGT+TGG | - | chr3_1:78938981-78939000 | None:intergenic | 30.0% |
GGTATAATTAATCATCTGTG+AGG | + | chr3_1:78939206-78939225 | Msa0378200:five_prime_UTR | 30.0% | |
!! | AATATTCTAGAGTAGATGGT+AGG | + | chr3_1:78939255-78939274 | Msa0378200:CDS | 30.0% |
AAACTGATAATAGCAATGCT+CGG | + | chr3_1:78939450-78939469 | Msa0378200:CDS | 30.0% | |
TGAAAAGAAAGATGAATCAG+AGG | + | chr3_1:78939691-78939710 | Msa0378200:CDS | 30.0% | |
AACAACAGATAGTAATGTAG+AGG | + | chr3_1:78939769-78939788 | Msa0378200:CDS | 30.0% | |
AAAGTTTGTAATGTTACTGC+TGG | + | chr3_1:78940016-78940035 | Msa0378200:CDS | 30.0% | |
! | TCAATTGTCATTTCATTCTC+TGG | + | chr3_1:78940225-78940244 | Msa0378200:intron | 30.0% |
!!! | TTTTTAAAGCTATACTGGTG+CGG | - | chr3_1:78940616-78940635 | None:intergenic | 30.0% |
AAAGTCATTGAAGAACTTTC+AGG | - | chr3_1:78940947-78940966 | None:intergenic | 30.0% | |
CGTATCTTAATTTCCTCTAT+TGG | - | chr3_1:78940982-78941001 | None:intergenic | 30.0% | |
TAGAGGAAATTAAGATACGT+TGG | + | chr3_1:78940983-78941002 | Msa0378200:intron | 30.0% | |
ATGTGCAGTTCATATGTATT+AGG | - | chr3_1:78941055-78941074 | None:intergenic | 30.0% | |
TTTACAATGTTTACTCGATG+TGG | + | chr3_1:78941220-78941239 | Msa0378200:intron | 30.0% | |
GGCATTTATCAATCTTAACT+TGG | + | chr3_1:78941633-78941652 | Msa0378200:intron | 30.0% | |
!! | TTGTTATACAGCTATTTTGG+TGG | + | chr3_1:78941713-78941732 | Msa0378200:intron | 30.0% |
!!! | TGTTATACAGCTATTTTGGT+GGG | + | chr3_1:78941714-78941733 | Msa0378200:intron | 30.0% |
CAAAAACAATTTACAACTGC+AGG | + | chr3_1:78941930-78941949 | Msa0378200:intron | 30.0% | |
TTCCTGAAGATGTTGAAATA+TGG | + | chr3_1:78942036-78942055 | Msa0378200:CDS | 30.0% | |
TTCCATATTTCAACATCTTC+AGG | - | chr3_1:78942041-78942060 | None:intergenic | 30.0% | |
GAAGATGTTGAAATATGGAA+TGG | + | chr3_1:78942041-78942060 | Msa0378200:CDS | 30.0% | |
TCATAACAATCATTGGATAG+TGG | - | chr3_1:78942241-78942260 | None:intergenic | 30.0% | |
GACTAATTCAGCAATTAACT+CGG | - | chr3_1:78942378-78942397 | None:intergenic | 30.0% | |
! | AAGTCTTATCTAAACGGATT+GGG | + | chr3_1:78942850-78942869 | Msa0378200:CDS | 30.0% |
ATGGATATGAACTCAATCTA+TGG | + | chr3_1:78942901-78942920 | Msa0378200:CDS | 30.0% | |
ATATGAACTCAATCTATGGA+GGG | + | chr3_1:78942905-78942924 | Msa0378200:CDS | 30.0% | |
! | TCTTTTCAAAGGTTCAGAAA+AGG | + | chr3_1:78943196-78943215 | Msa0378200:CDS | 30.0% |
!! | AGTTTGCTGGTTATTAATGT+GGG | - | chr3_1:78943241-78943260 | None:intergenic | 30.0% |
!! | AAGTTTGCTGGTTATTAATG+TGG | - | chr3_1:78943242-78943261 | None:intergenic | 30.0% |
!! | TGGTTTTGCTAATGCTTATT+TGG | + | chr3_1:78943269-78943288 | Msa0378200:intron | 30.0% |
! | TTTTGCTAATGCTTATTTGG+TGG | + | chr3_1:78943272-78943291 | Msa0378200:intron | 30.0% |
AGTATGCTATTGTTTAAGCA+CGG | + | chr3_1:78943515-78943534 | Msa0378200:exon | 30.0% | |
! | TTGTATTCGTCTTTTACCTT+TGG | + | chr3_1:78943630-78943649 | Msa0378200:three_prime_UTR | 30.0% |
!! | TTCTATAATATGGTGCCATA+GGG | + | chr3_1:78943700-78943719 | Msa0378200:three_prime_UTR | 30.0% |
GCAACTGAATATATATGGAT+TGG | + | chr3_1:78943837-78943856 | Msa0378200:three_prime_UTR | 30.0% | |
!! | CTGAATATATATGGATTGGA+CGG | + | chr3_1:78943841-78943860 | Msa0378200:three_prime_UTR | 30.0% |
!! | TGAATATATATGGATTGGAC+GGG | + | chr3_1:78943842-78943861 | Msa0378200:three_prime_UTR | 30.0% |
AAGTACAGTATTCAACATTC+AGG | - | chr3_1:78943882-78943901 | None:intergenic | 30.0% | |
TGCACAACCAAAACTAAAAA+AGG | - | chr3_1:78943908-78943927 | None:intergenic | 30.0% | |
ACTAACCAAAGAAACACATG+CGG | - | chr3_1:78938341-78938360 | None:intergenic | 35.0% | |
AACTAAACTCTCTCTTCCTT+CGG | + | chr3_1:78938541-78938560 | Msa0378200:five_prime_UTR | 35.0% | |
TTTGACAGTGTGTGAATGTT+GGG | - | chr3_1:78938583-78938602 | None:intergenic | 35.0% | |
GAGATTCGAAATTGAGAGAA+AGG | - | chr3_1:78938608-78938627 | None:intergenic | 35.0% | |
GTGAAGAAGCAAAGAAAGAA+AGG | - | chr3_1:78938754-78938773 | None:intergenic | 35.0% | |
!! | GGGAAATATTCTAGAGTAGA+TGG | + | chr3_1:78939251-78939270 | Msa0378200:CDS | 35.0% |
GGTAAGAAAACAGAAGATGA+AGG | + | chr3_1:78939602-78939621 | Msa0378200:CDS | 35.0% | |
AAATAACAAAGACAGCGAAG+AGG | + | chr3_1:78939637-78939656 | Msa0378200:CDS | 35.0% | |
AGATAGTAATGTAGAGGAGA+AGG | + | chr3_1:78939775-78939794 | Msa0378200:CDS | 35.0% | |
AAAGAATCTGATGAAAACGC+TGG | + | chr3_1:78939815-78939834 | Msa0378200:CDS | 35.0% | |
AATGAAACTACGACACAAAC+TGG | + | chr3_1:78939917-78939936 | Msa0378200:CDS | 35.0% | |
! | AACTGGATCATTTTCTACTC+AGG | + | chr3_1:78939934-78939953 | Msa0378200:CDS | 35.0% |
AGCAGAGTCAAAGAATGAAA+AGG | + | chr3_1:78939958-78939977 | Msa0378200:CDS | 35.0% | |
!! | TTAACCTTCTCTCTGCTTTT+AGG | - | chr3_1:78940193-78940212 | None:intergenic | 35.0% |
!! | TGTTATTTCTCCTGCAGATA+TGG | + | chr3_1:78940274-78940293 | Msa0378200:intron | 35.0% |
CATTGTAATACCATATCTGC+AGG | - | chr3_1:78940287-78940306 | None:intergenic | 35.0% | |
!! | ACTAAGCTTGCTGAAGTTAA+GGG | + | chr3_1:78940315-78940334 | Msa0378200:CDS | 35.0% |
!! | AAGTTAAGGGGCATCAAAAT+TGG | + | chr3_1:78940328-78940347 | Msa0378200:CDS | 35.0% |
!! | AGTTAAGGGGCATCAAAATT+GGG | + | chr3_1:78940329-78940348 | Msa0378200:CDS | 35.0% |
TCAAAATTGGGTGAAAGTCA+CGG | + | chr3_1:78940341-78940360 | Msa0378200:CDS | 35.0% | |
!! | CAAGAGGTATGCATTTTGTT+TGG | + | chr3_1:78940435-78940454 | Msa0378200:intron | 35.0% |
TGTGACAACTTGACAAGTTA+GGG | - | chr3_1:78940568-78940587 | None:intergenic | 35.0% | |
ATCTTGTTGATCTAAGCTTG+TGG | + | chr3_1:78940695-78940714 | Msa0378200:intron | 35.0% | |
TCTTGTTGATCTAAGCTTGT+GGG | + | chr3_1:78940696-78940715 | Msa0378200:intron | 35.0% | |
ACAAACAATTTCTTCACTCC+AGG | - | chr3_1:78940770-78940789 | None:intergenic | 35.0% | |
TAATTTCCTCTATTGGCAGT+TGG | - | chr3_1:78940975-78940994 | None:intergenic | 35.0% | |
ACTTCTTCTGATAAAGAAGC+TGG | - | chr3_1:78941150-78941169 | None:intergenic | 35.0% | |
TGCATCATCAAAGCTCTATT+AGG | - | chr3_1:78941266-78941285 | None:intergenic | 35.0% | |
ACACGTGTTATACTAGATGT+TGG | + | chr3_1:78941317-78941336 | Msa0378200:CDS | 35.0% | |
GTTATACTAGATGTTGGATG+TGG | + | chr3_1:78941323-78941342 | Msa0378200:CDS | 35.0% | |
!!! | GTTATACAGCTATTTTGGTG+GGG | + | chr3_1:78941715-78941734 | Msa0378200:intron | 35.0% |
TGCTGTGTAATTCAAACACA+TGG | - | chr3_1:78941814-78941833 | None:intergenic | 35.0% | |
AAACAATTTACAACTGCAGG+TGG | + | chr3_1:78941933-78941952 | Msa0378200:intron | 35.0% | |
TCAGGAAGCTTCTGATAAAT+AGG | - | chr3_1:78942023-78942042 | None:intergenic | 35.0% | |
ATCAGCAAGGATCAAGTTAA+TGG | + | chr3_1:78942190-78942209 | Msa0378200:CDS | 35.0% | |
AAGGATCAAGTTAATGGAGT+TGG | + | chr3_1:78942196-78942215 | Msa0378200:CDS | 35.0% | |
TCGTTGCTCATAACAATCAT+TGG | - | chr3_1:78942248-78942267 | None:intergenic | 35.0% | |
! | TCATCAGATTTTTGACACAG+TGG | - | chr3_1:78942286-78942305 | None:intergenic | 35.0% |
! | GTTTTTGCTCATGTCAGTTA+AGG | - | chr3_1:78942333-78942352 | None:intergenic | 35.0% |
!! | TTTTTATTTGGCTGGAGACT+TGG | + | chr3_1:78942522-78942541 | Msa0378200:intron | 35.0% |
TGACAACCAATATGGTACAT+TGG | - | chr3_1:78942749-78942768 | None:intergenic | 35.0% | |
TATCAGCAGCAAAATCTTCA+GGG | - | chr3_1:78942804-78942823 | None:intergenic | 35.0% | |
TTATCAGCAGCAAAATCTTC+AGG | - | chr3_1:78942805-78942824 | None:intergenic | 35.0% | |
TTGCTGCTGATAATAAACAC+TGG | + | chr3_1:78942812-78942831 | Msa0378200:CDS | 35.0% | |
! | GTGTCCAAGTCTTATCTAAA+CGG | + | chr3_1:78942844-78942863 | Msa0378200:CDS | 35.0% |
CAATCCGTTTAGATAAGACT+TGG | - | chr3_1:78942851-78942870 | None:intergenic | 35.0% | |
! | CAAGTCTTATCTAAACGGAT+TGG | + | chr3_1:78942849-78942868 | Msa0378200:CDS | 35.0% |
GAATTCAGTGGTCAAATGTA+CGG | + | chr3_1:78942872-78942891 | Msa0378200:CDS | 35.0% | |
GATATGAACTCAATCTATGG+AGG | + | chr3_1:78942904-78942923 | Msa0378200:CDS | 35.0% | |
! | CCGTTCATAAATAATGGGAA+GGG | - | chr3_1:78943094-78943113 | None:intergenic | 35.0% |
CCCTTCCCATTATTTATGAA+CGG | + | chr3_1:78943091-78943110 | Msa0378200:CDS | 35.0% | |
CCTTCCCATTATTTATGAAC+GGG | + | chr3_1:78943092-78943111 | Msa0378200:CDS | 35.0% | |
CTTCCCATTATTTATGAACG+GGG | + | chr3_1:78943093-78943112 | Msa0378200:CDS | 35.0% | |
AGACCCCGTTCATAAATAAT+GGG | - | chr3_1:78943099-78943118 | None:intergenic | 35.0% | |
AAGACCCCGTTCATAAATAA+TGG | - | chr3_1:78943100-78943119 | None:intergenic | 35.0% | |
! | ATTTATGAACGGGGTCTTTT+TGG | + | chr3_1:78943102-78943121 | Msa0378200:CDS | 35.0% |
TTGAAAAGAGATGATCTGCA+TGG | - | chr3_1:78943185-78943204 | None:intergenic | 35.0% | |
! | TGCAGATCATCTCTTTTCAA+AGG | + | chr3_1:78943185-78943204 | Msa0378200:CDS | 35.0% |
!! | CTTCTATAATATGGTGCCAT+AGG | + | chr3_1:78943699-78943718 | Msa0378200:three_prime_UTR | 35.0% |
TTAAGGAAGAGGAAACCATG+AGG | - | chr3_1:78938389-78938408 | None:intergenic | 40.0% | |
AAAAAATAGTTAAGGGCCGG+AGG | - | chr3_1:78938424-78938443 | None:intergenic | 40.0% | |
GTTTGACAGTGTGTGAATGT+TGG | - | chr3_1:78938584-78938603 | None:intergenic | 40.0% | |
CAGATCTAAGAGGAAGATGA+AGG | - | chr3_1:78938667-78938686 | None:intergenic | 40.0% | |
TAGCAAGAAGCAGATCTAAG+AGG | - | chr3_1:78938677-78938696 | None:intergenic | 40.0% | |
CGATCTGAGAGATGAAGATT+GGG | - | chr3_1:78938724-78938743 | None:intergenic | 40.0% | |
!!! | CGAATCTTGTTTTCTGCGTT+TGG | + | chr3_1:78938792-78938811 | Msa0378200:intron | 40.0% |
! | TGCTTCGTAATTTGCGATTC+TGG | + | chr3_1:78939106-78939125 | Msa0378200:intron | 40.0% |
TTTCCCTAAAGCCATGTCTT+CGG | - | chr3_1:78939237-78939256 | None:intergenic | 40.0% | |
!! | TTTGTTGCTCTAGCCTTGAT+TGG | + | chr3_1:78939317-78939336 | Msa0378200:CDS | 40.0% |
!! | TTGTTGCTCTAGCCTTGATT+GGG | + | chr3_1:78939318-78939337 | Msa0378200:CDS | 40.0% |
!! | ACCTCATTTTTACTCTCCTG+AGG | - | chr3_1:78939395-78939414 | None:intergenic | 40.0% |
GGAGAGTAAAAATGAGGTGA+AGG | + | chr3_1:78939397-78939416 | Msa0378200:CDS | 40.0% | |
! | ATTTTCCTCCGACTTCTCTT+CGG | - | chr3_1:78939540-78939559 | None:intergenic | 40.0% |
GGAGAACAACAAGTCTGATT+CGG | + | chr3_1:78939712-78939731 | Msa0378200:CDS | 40.0% | |
TAGTAATGTAGAGGAGAAGG+TGG | + | chr3_1:78939778-78939797 | Msa0378200:CDS | 40.0% | |
! | CTCATTTGAACTCTGGTCTT+TGG | - | chr3_1:78939864-78939883 | None:intergenic | 40.0% |
CAAAGACCAGAGTTCAAATG+AGG | + | chr3_1:78939862-78939881 | Msa0378200:CDS | 40.0% | |
GGAATACCTCATTTGAACTC+TGG | - | chr3_1:78939871-78939890 | None:intergenic | 40.0% | |
! | TCAAATGAGGTATTCCCTTC+CGG | + | chr3_1:78939875-78939894 | Msa0378200:CDS | 40.0% |
TTTCCAATTGTACCCAGTCT+TGG | - | chr3_1:78939999-78940018 | None:intergenic | 40.0% | |
TAATCGCTTTCCAGTTGTCA+AGG | - | chr3_1:78940060-78940079 | None:intergenic | 40.0% | |
TTGACAACTGGAAAGCGATT+AGG | + | chr3_1:78940059-78940078 | Msa0378200:CDS | 40.0% | |
! | ATAGAGCGCTTATATCCTTC+AGG | - | chr3_1:78940163-78940182 | None:intergenic | 40.0% |
GATATAAGCGCTCTATTGAG+TGG | + | chr3_1:78940167-78940186 | Msa0378200:CDS | 40.0% | |
!! | CACTAAGCTTGCTGAAGTTA+AGG | + | chr3_1:78940314-78940333 | Msa0378200:CDS | 40.0% |
!! | CTAAGCTTGCTGAAGTTAAG+GGG | + | chr3_1:78940316-78940335 | Msa0378200:CDS | 40.0% |
CAAAATTGGGTGAAAGTCAC+GGG | + | chr3_1:78940342-78940361 | Msa0378200:CDS | 40.0% | |
!! | GGTGAGTATCTTACTTTTCC+TGG | + | chr3_1:78940363-78940382 | Msa0378200:CDS | 40.0% |
!! | GAGTATCTTACTTTTCCTGG+TGG | + | chr3_1:78940366-78940385 | Msa0378200:CDS | 40.0% |
!! | TATCTTACTTTTCCTGGTGG+TGG | + | chr3_1:78940369-78940388 | Msa0378200:CDS | 40.0% |
GTGTGACAACTTGACAAGTT+AGG | - | chr3_1:78940569-78940588 | None:intergenic | 40.0% | |
TTTGTCCTGTTGTGCGTAAA+CGG | - | chr3_1:78941031-78941050 | None:intergenic | 40.0% | |
ATATGAACTGCACATCTGTG+AGG | + | chr3_1:78941060-78941079 | Msa0378200:intron | 40.0% | |
TGAGCTTCATGTTCATCCTT+TGG | - | chr3_1:78941407-78941426 | None:intergenic | 40.0% | |
AAAGGATGAACATGAAGCTC+AGG | + | chr3_1:78941406-78941425 | Msa0378200:CDS | 40.0% | |
! | AGGTTCAATTTGCTCTTGAG+AGG | + | chr3_1:78941426-78941445 | Msa0378200:CDS | 40.0% |
! | GGTTCAATTTGCTCTTGAGA+GGG | + | chr3_1:78941427-78941446 | Msa0378200:CDS | 40.0% |
! | GTTCAATTTGCTCTTGAGAG+GGG | + | chr3_1:78941428-78941447 | Msa0378200:CDS | 40.0% |
! | TTCAATTTGCTCTTGAGAGG+GGG | + | chr3_1:78941429-78941448 | Msa0378200:CDS | 40.0% |
TCCTGCTATATCTGCTGTAA+TGG | + | chr3_1:78941454-78941473 | Msa0378200:CDS | 40.0% | |
CCTGCTATATCTGCTGTAAT+GGG | + | chr3_1:78941455-78941474 | Msa0378200:CDS | 40.0% | |
TGAATACCTTCAATGTGCCA+TGG | - | chr3_1:78941545-78941564 | None:intergenic | 40.0% | |
! | TGCAGGTGGTAAACTTCTTT+TGG | + | chr3_1:78941947-78941966 | Msa0378200:intron | 40.0% |
GACCATACAAAAAAACCACC+AGG | - | chr3_1:78941993-78942012 | None:intergenic | 40.0% | |
! | GGAACTTGTTTCAATCAGCA+AGG | + | chr3_1:78942177-78942196 | Msa0378200:CDS | 40.0% |
! | GGATAGTGGCTTCTTGTATA+TGG | - | chr3_1:78942227-78942246 | None:intergenic | 40.0% |
! | TCAGATTTTTGACACAGTGG+AGG | - | chr3_1:78942283-78942302 | None:intergenic | 40.0% |
AAGGAATACCATGCTGCATT+GGG | - | chr3_1:78942310-78942329 | None:intergenic | 40.0% | |
TTGCTCATGTCAGTTAAGGA+AGG | - | chr3_1:78942329-78942348 | None:intergenic | 40.0% | |
!! | TCACTTTTCCAAGACAGGAA+GGG | - | chr3_1:78942462-78942481 | None:intergenic | 40.0% |
!! | AACAGGGCTTTTTATTTGGC+TGG | + | chr3_1:78942514-78942533 | Msa0378200:intron | 40.0% |
TCTAATCTCTCTGATGTGAC+AGG | + | chr3_1:78942632-78942651 | Msa0378200:intron | 40.0% | |
TGGGAACTTGACAACCAATA+TGG | - | chr3_1:78942757-78942776 | None:intergenic | 40.0% | |
CTTACCATAGACTCCAACTT+GGG | - | chr3_1:78942776-78942795 | None:intergenic | 40.0% | |
ATCAGCAGCAAAATCTTCAG+GGG | - | chr3_1:78942803-78942822 | None:intergenic | 40.0% | |
!! | TAAACGGATTGGGAATTCAG+TGG | + | chr3_1:78942860-78942879 | Msa0378200:CDS | 40.0% |
GTCAAATGTACGGAATGTCA+TGG | + | chr3_1:78942882-78942901 | Msa0378200:CDS | 40.0% | |
CAATCGGTAGATGTCAAACA+CGG | - | chr3_1:78942993-78943012 | None:intergenic | 40.0% | |
! | TGTTTGACATCTACCGATTG+TGG | + | chr3_1:78942993-78943012 | Msa0378200:intron | 40.0% |
TTTCAAAGCTGCAGCAAATC+TGG | - | chr3_1:78943022-78943041 | None:intergenic | 40.0% | |
!! | AATAATGGGAAGGGTATCTG+CGG | - | chr3_1:78943085-78943104 | None:intergenic | 40.0% |
! | CCCGTTCATAAATAATGGGA+AGG | - | chr3_1:78943095-78943114 | None:intergenic | 40.0% |
AATCATTTAGCACCTATCCC+AGG | + | chr3_1:78943145-78943164 | Msa0378200:CDS | 40.0% | |
AAAAGAGATGATCTGCATGG+AGG | - | chr3_1:78943182-78943201 | None:intergenic | 40.0% | |
CTGAAGGAAAGCTTATTGTC+CGG | + | chr3_1:78943350-78943369 | Msa0378200:CDS | 40.0% | |
TGAAGGAAAGCTTATTGTCC+GGG | + | chr3_1:78943351-78943370 | Msa0378200:CDS | 40.0% | |
TAACAAACCCTCCTTATCCT+TGG | - | chr3_1:78943449-78943468 | None:intergenic | 40.0% | |
GATGAGATGCCAAAATGCTT+GGG | + | chr3_1:78943537-78943556 | Msa0378200:three_prime_UTR | 40.0% | |
! | ACACAAGAATTTTGAGCAGC+CGG | - | chr3_1:78943565-78943584 | None:intergenic | 40.0% |
CAAAGAAACACATGCGGCTA+AGG | - | chr3_1:78938335-78938354 | None:intergenic | 45.0% | |
CTTAGCCGCATGTGTTTCTT+TGG | + | chr3_1:78938333-78938352 | Msa0378200:five_prime_UTR | 45.0% | |
! | ATCTGAGCATTGTGTGAACG+CGG | - | chr3_1:78938640-78938659 | None:intergenic | 45.0% |
! | GCTTCTTGCTATAGAACCAG+AGG | + | chr3_1:78938686-78938705 | Msa0378200:five_prime_UTR | 45.0% |
GAGAGATGAAGATTGGGAAC+AGG | - | chr3_1:78938718-78938737 | None:intergenic | 45.0% | |
GCGATCTGAGAGATGAAGAT+TGG | - | chr3_1:78938725-78938744 | None:intergenic | 45.0% | |
! | GATCCGAAGACATGGCTTTA+GGG | + | chr3_1:78939231-78939250 | Msa0378200:exon | 45.0% |
!! | TGTTGCTCTAGCCTTGATTG+GGG | + | chr3_1:78939319-78939338 | Msa0378200:CDS | 45.0% |
CATCATCCAAACCCCAATCA+AGG | - | chr3_1:78939333-78939352 | None:intergenic | 45.0% | |
GCCTCAGGAGAGTAAAAATG+AGG | + | chr3_1:78939391-78939410 | Msa0378200:CDS | 45.0% | |
CGGCAGTTTGAAGATAATCC+TGG | + | chr3_1:78939470-78939489 | Msa0378200:CDS | 45.0% | |
! | TAATCCTGGTGATTTGCCTG+AGG | + | chr3_1:78939484-78939503 | Msa0378200:CDS | 45.0% |
GAAGTCGGAGGAAAATTCCA+CGG | + | chr3_1:78939544-78939563 | Msa0378200:CDS | 45.0% | |
ATCTTCAGAAGACTTCTCCG+TGG | - | chr3_1:78939564-78939583 | None:intergenic | 45.0% | |
AGATACGAAGACAGAAGACG+AGG | + | chr3_1:78939580-78939599 | Msa0378200:CDS | 45.0% | |
GATACGAAGACAGAAGACGA+GGG | + | chr3_1:78939581-78939600 | Msa0378200:CDS | 45.0% | |
! | CAAATGAGGTATTCCCTTCC+GGG | + | chr3_1:78939876-78939895 | Msa0378200:CDS | 45.0% |
! | AAATGAGGTATTCCCTTCCG+GGG | + | chr3_1:78939877-78939896 | Msa0378200:CDS | 45.0% |
ATTCAAGAGTCCTCCAAGAC+TGG | + | chr3_1:78939983-78940002 | Msa0378200:CDS | 45.0% | |
TTCAAGAGTCCTCCAAGACT+GGG | + | chr3_1:78939984-78940003 | Msa0378200:CDS | 45.0% | |
TCAAGGCATGGGATAAAGTC+GGG | - | chr3_1:78940043-78940062 | None:intergenic | 45.0% | |
GTCAAGGCATGGGATAAAGT+CGG | - | chr3_1:78940044-78940063 | None:intergenic | 45.0% | |
TTATCCCATGCCTTGACAAC+TGG | + | chr3_1:78940047-78940066 | Msa0378200:CDS | 45.0% | |
CTTTCCAGTTGTCAAGGCAT+GGG | - | chr3_1:78940054-78940073 | None:intergenic | 45.0% | |
GGAAAGCGATTAGGAGTCTT+CGG | + | chr3_1:78940068-78940087 | Msa0378200:CDS | 45.0% | |
ATCCTTCAGGAAGAGAGACA+AGG | - | chr3_1:78940150-78940169 | None:intergenic | 45.0% | |
ACTTCAGCAAGCTTAGTGTG+TGG | - | chr3_1:78940312-78940331 | None:intergenic | 45.0% | |
GTGGAACCCAATTCAAGCAT+GGG | + | chr3_1:78940388-78940407 | Msa0378200:CDS | 45.0% | |
TGGAACCCAATTCAAGCATG+GGG | + | chr3_1:78940389-78940408 | Msa0378200:CDS | 45.0% | |
AAGTGCCCCATGCTTGAATT+GGG | - | chr3_1:78940397-78940416 | None:intergenic | 45.0% | |
TACCAGTTCGGTCTAAACTG+TGG | - | chr3_1:78940832-78940851 | None:intergenic | 45.0% | |
ACAGTTTAGACCGAACTGGT+AGG | + | chr3_1:78940831-78940850 | Msa0378200:intron | 45.0% | |
TTAGACCGAACTGGTAGGAA+TGG | + | chr3_1:78940836-78940855 | Msa0378200:intron | 45.0% | |
! | ATGTGCCATTCCTACCAGTT+CGG | - | chr3_1:78940844-78940863 | None:intergenic | 45.0% |
TCTGTACCAACTGCCAATAG+AGG | + | chr3_1:78940966-78940985 | Msa0378200:intron | 45.0% | |
TTGTCCTGTTGTGCGTAAAC+GGG | - | chr3_1:78941030-78941049 | None:intergenic | 45.0% | |
! | TGCAATGTCACTTGCACCAA+AGG | + | chr3_1:78941388-78941407 | Msa0378200:CDS | 45.0% |
CCCATTACAGCAGATATAGC+AGG | - | chr3_1:78941458-78941477 | None:intergenic | 45.0% | |
TCAAATACTCTCCCAGGGAA+GGG | - | chr3_1:78941494-78941513 | None:intergenic | 45.0% | |
ATCAAATACTCTCCCAGGGA+AGG | - | chr3_1:78941495-78941514 | None:intergenic | 45.0% | |
CTGCATCAAATACTCTCCCA+GGG | - | chr3_1:78941499-78941518 | None:intergenic | 45.0% | |
ACTGCATCAAATACTCTCCC+AGG | - | chr3_1:78941500-78941519 | None:intergenic | 45.0% | |
GAACTCTACAACGTGCACAA+TGG | - | chr3_1:78941523-78941542 | None:intergenic | 45.0% | |
AGAGTTCCATGGCACATTGA+AGG | + | chr3_1:78941536-78941555 | Msa0378200:CDS | 45.0% | |
!!! | ATACAGCTATTTTGGTGGGG+TGG | + | chr3_1:78941718-78941737 | Msa0378200:intron | 45.0% |
!!! | TACAGCTATTTTGGTGGGGT+GGG | + | chr3_1:78941719-78941738 | Msa0378200:intron | 45.0% |
!! | TGGAGCTGAACAGAGTATTG+CGG | + | chr3_1:78941967-78941986 | Msa0378200:CDS | 45.0% |
!!! | GGCCTGGTGGTTTTTTTGTA+TGG | + | chr3_1:78941988-78942007 | Msa0378200:CDS | 45.0% |
GAAGGAATACCATGCTGCAT+TGG | - | chr3_1:78942311-78942330 | None:intergenic | 45.0% | |
! | ACTTTTCCAAGACAGGAAGG+GGG | - | chr3_1:78942460-78942479 | None:intergenic | 45.0% |
! | CACTTTTCCAAGACAGGAAG+GGG | - | chr3_1:78942461-78942480 | None:intergenic | 45.0% |
!! | CTCACTTTTCCAAGACAGGA+AGG | - | chr3_1:78942463-78942482 | None:intergenic | 45.0% |
CTTCCTGTCTTGGAAAAGTG+AGG | + | chr3_1:78942461-78942480 | Msa0378200:intron | 45.0% | |
!! | GTTCCTCACTTTTCCAAGAC+AGG | - | chr3_1:78942467-78942486 | None:intergenic | 45.0% |
CCAGTTAGTTCAAGTGAACG+CGG | + | chr3_1:78942688-78942707 | Msa0378200:CDS | 45.0% | |
CAGTTAGTTCAAGTGAACGC+GGG | + | chr3_1:78942689-78942708 | Msa0378200:CDS | 45.0% | |
ATATGGTACATTGGTCAGCC+TGG | - | chr3_1:78942740-78942759 | None:intergenic | 45.0% | |
GGCTGACCAATGTACCATAT+TGG | + | chr3_1:78942740-78942759 | Msa0378200:CDS | 45.0% | |
TGGTTGTCAAGTTCCCAAGT+TGG | + | chr3_1:78942760-78942779 | Msa0378200:CDS | 45.0% | |
! | AGTTCCCAAGTTGGAGTCTA+TGG | + | chr3_1:78942769-78942788 | Msa0378200:CDS | 45.0% |
GCTTACCATAGACTCCAACT+TGG | - | chr3_1:78942777-78942796 | None:intergenic | 45.0% | |
AGTTGGAGTCTATGGTAAGC+CGG | + | chr3_1:78942777-78942796 | Msa0378200:CDS | 45.0% | |
GCAAATCTGGAAGCCACAAT+CGG | - | chr3_1:78943009-78943028 | None:intergenic | 45.0% | |
GAGATCATATGTCCTGGGAT+AGG | - | chr3_1:78943160-78943179 | None:intergenic | 45.0% | |
TGGAGGAGATCATATGTCCT+GGG | - | chr3_1:78943165-78943184 | None:intergenic | 45.0% | |
ATGGAGGAGATCATATGTCC+TGG | - | chr3_1:78943166-78943185 | None:intergenic | 45.0% | |
! | CAGATGCAATCTAGCTTCTC+TGG | + | chr3_1:78943300-78943319 | Msa0378200:intron | 45.0% |
CGGACAATAAGCTTTCCTTC+AGG | - | chr3_1:78943352-78943371 | None:intergenic | 45.0% | |
TAATGACCTCAACAGTGTCC+CGG | - | chr3_1:78943372-78943391 | None:intergenic | 45.0% | |
CATTAACGAGCTTGAGAGCA+TGG | + | chr3_1:78943387-78943406 | Msa0378200:CDS | 45.0% | |
CATGGTAAAGTCCATGCAGT+GGG | + | chr3_1:78943405-78943424 | Msa0378200:CDS | 45.0% | |
CATGACCTACTCCAAGGATA+AGG | + | chr3_1:78943435-78943454 | Msa0378200:CDS | 45.0% | |
ACCTACTCCAAGGATAAGGA+GGG | + | chr3_1:78943439-78943458 | Msa0378200:CDS | 45.0% | |
TTGAGTGTCTCTGTCTCCTT+AGG | - | chr3_1:78943496-78943515 | None:intergenic | 45.0% | |
GGATGAGATGCCAAAATGCT+TGG | + | chr3_1:78943536-78943555 | Msa0378200:three_prime_UTR | 45.0% | |
ATGCCAAAATGCTTGGGTTC+CGG | + | chr3_1:78943543-78943562 | Msa0378200:three_prime_UTR | 45.0% | |
!! | TAATATGGTGCCATAGGGTG+AGG | + | chr3_1:78943705-78943724 | Msa0378200:three_prime_UTR | 45.0% |
!! | AATATGGTGCCATAGGGTGA+GGG | + | chr3_1:78943706-78943725 | Msa0378200:three_prime_UTR | 45.0% |
ATCAGATTTCCCTCACCCTA+TGG | - | chr3_1:78943718-78943737 | None:intergenic | 45.0% | |
!! | ATATAAAATAAATAAATCAA+TGG | - | chr3_1:78943763-78943782 | None:intergenic | 5.0% |
AATGTCTCCCTCAGTCCTCA+TGG | + | chr3_1:78938371-78938390 | Msa0378200:five_prime_UTR | 50.0% | |
GAGGAAACCATGAGGACTGA+GGG | - | chr3_1:78938381-78938400 | None:intergenic | 50.0% | |
AGAGGAAACCATGAGGACTG+AGG | - | chr3_1:78938382-78938401 | None:intergenic | 50.0% | |
GAGGGAGTGACTTAAGGAAG+AGG | - | chr3_1:78938400-78938419 | None:intergenic | 50.0% | |
TTAAGTCACTCCCTCTCCTC+CGG | + | chr3_1:78938405-78938424 | Msa0378200:five_prime_UTR | 50.0% | |
CGATCCGAAGACATGGCTTT+AGG | + | chr3_1:78939230-78939249 | Msa0378200:exon | 50.0% | |
!! | CTCTAGCCTTGATTGGGGTT+TGG | + | chr3_1:78939324-78939343 | Msa0378200:CDS | 50.0% |
TGTAGTTCCCGTGCAAAACG+AGG | + | chr3_1:78939364-78939383 | Msa0378200:CDS | 50.0% | |
TGAGGTGAAGGAACAGACTG+AGG | + | chr3_1:78939409-78939428 | Msa0378200:CDS | 50.0% | |
TGAAGGAACAGACTGAGGTG+AGG | + | chr3_1:78939414-78939433 | Msa0378200:CDS | 50.0% | |
GAAGGAACAGACTGAGGTGA+GGG | + | chr3_1:78939415-78939434 | Msa0378200:CDS | 50.0% | |
TGTCAGCTCCGAAGAGAAGT+CGG | + | chr3_1:78939529-78939548 | Msa0378200:CDS | 50.0% | |
CCAATTGTACCCAGTCTTGG+AGG | - | chr3_1:78939996-78940015 | None:intergenic | 50.0% | |
CCTCCAAGACTGGGTACAAT+TGG | + | chr3_1:78939993-78940012 | Msa0378200:CDS | 50.0% | |
CAAGGCATGGGATAAAGTCG+GGG | - | chr3_1:78940042-78940061 | None:intergenic | 50.0% | |
GCTTTCCAGTTGTCAAGGCA+TGG | - | chr3_1:78940055-78940074 | None:intergenic | 50.0% | |
TTCAGGAAGAGAGACAAGGC+AGG | - | chr3_1:78940146-78940165 | None:intergenic | 50.0% | |
TGCCTTGTCTCTCTTCCTGA+AGG | + | chr3_1:78940145-78940164 | Msa0378200:CDS | 50.0% | |
GTGGCCTAAAAGCAGAGAGA+AGG | + | chr3_1:78940186-78940205 | Msa0378200:CDS | 50.0% | |
TTGAATTGGGTTCCACCACC+AGG | - | chr3_1:78940384-78940403 | None:intergenic | 50.0% | |
GGTGGAACCCAATTCAAGCA+TGG | + | chr3_1:78940387-78940406 | Msa0378200:CDS | 50.0% | |
! | GAAGTGCCCCATGCTTGAAT+TGG | - | chr3_1:78940398-78940417 | None:intergenic | 50.0% |
TGCCACAGTTTAGACCGAAC+TGG | + | chr3_1:78940827-78940846 | Msa0378200:intron | 50.0% | |
TGTCCTGTTGTGCGTAAACG+GGG | - | chr3_1:78941029-78941048 | None:intergenic | 50.0% | |
AGACTCTGCCTGACATTGCT+TGG | + | chr3_1:78941285-78941304 | Msa0378200:intron | 50.0% | |
GACTCTGCCTGACATTGCTT+GGG | + | chr3_1:78941286-78941305 | Msa0378200:intron | 50.0% | |
ACTCTGCCTGACATTGCTTG+GGG | + | chr3_1:78941287-78941306 | Msa0378200:CDS | 50.0% | |
TGTTTGCCCCAAGCAATGTC+AGG | - | chr3_1:78941296-78941315 | None:intergenic | 50.0% | |
AAAGAGAAAGCCTCCGAAGC+TGG | - | chr3_1:78941354-78941373 | None:intergenic | 50.0% | |
!! | CTGCTGTAATGGGCACAAAG+AGG | + | chr3_1:78941465-78941484 | Msa0378200:CDS | 50.0% |
GTGCACGTTGTAGAGTTCCA+TGG | + | chr3_1:78941525-78941544 | Msa0378200:CDS | 50.0% | |
! | TTTTGGTGGGGTGGGTATGT+TGG | + | chr3_1:78941727-78941746 | Msa0378200:intron | 50.0% |
CTGATGATCCCAATGCAGCA+TGG | + | chr3_1:78942299-78942318 | Msa0378200:CDS | 50.0% | |
TTCTTACCCCCTTCCTGTCT+TGG | + | chr3_1:78942451-78942470 | Msa0378200:intron | 50.0% | |
CCGCGTTCACTTGAACTAAC+TGG | - | chr3_1:78942691-78942710 | None:intergenic | 50.0% | |
CGGTAGATGTCAAACACGGA+AGG | - | chr3_1:78942989-78943008 | None:intergenic | 50.0% | |
! | CTGAGGTTGATCGGATTCTC+AGG | + | chr3_1:78943326-78943345 | Msa0378200:CDS | 50.0% |
TATTGTCCGGGACACTGTTG+AGG | + | chr3_1:78943363-78943382 | Msa0378200:CDS | 50.0% | |
GCATGGTAAAGTCCATGCAG+TGG | + | chr3_1:78943404-78943423 | Msa0378200:CDS | 50.0% | |
GACCTACTCCAAGGATAAGG+AGG | + | chr3_1:78943438-78943457 | Msa0378200:CDS | 50.0% | |
ACCCTCCTTATCCTTGGAGT+AGG | - | chr3_1:78943443-78943462 | None:intergenic | 50.0% | |
TATGTGTCCAGAAGTCCACC+TGG | + | chr3_1:78943467-78943486 | Msa0378200:CDS | 50.0% | |
GGAGGAGAGGGAGTGACTTA+AGG | - | chr3_1:78938406-78938425 | None:intergenic | 55.0% | |
TAGTTAAGGGCCGGAGGAGA+GGG | - | chr3_1:78938418-78938437 | None:intergenic | 55.0% | |
ATAGTTAAGGGCCGGAGGAG+AGG | - | chr3_1:78938419-78938438 | None:intergenic | 55.0% | |
TGGGAACAGGAACGTACCTC+TGG | - | chr3_1:78938705-78938724 | None:intergenic | 55.0% | |
GTGAGGTCGATCCGAAGACA+TGG | + | chr3_1:78939223-78939242 | Msa0378200:exon | 55.0% | |
! | AGGCACGTCCTCGTTTTGCA+CGG | - | chr3_1:78939375-78939394 | None:intergenic | 55.0% |
GCATCCTCAGGCAAATCACC+AGG | - | chr3_1:78939491-78939510 | None:intergenic | 55.0% | |
TTTGCCTGAGGATGCGACCA+AGG | + | chr3_1:78939496-78939515 | Msa0378200:CDS | 55.0% | |
TTGCCTGAGGATGCGACCAA+GGG | + | chr3_1:78939497-78939516 | Msa0378200:CDS | 55.0% | |
GCTGACATTGCTATCCCCCT+TGG | - | chr3_1:78939516-78939535 | None:intergenic | 55.0% | |
!! | CAGCGAAGAGGCGTCTACTA+AGG | + | chr3_1:78939649-78939668 | Msa0378200:CDS | 55.0% |
TAGAAGCTCAGACTGAGCCC+CGG | - | chr3_1:78939897-78939916 | None:intergenic | 55.0% | |
GGAAGAGAGACAAGGCAGGT+GGG | - | chr3_1:78940142-78940161 | None:intergenic | 55.0% | |
AGGAAGAGAGACAAGGCAGG+TGG | - | chr3_1:78940143-78940162 | None:intergenic | 55.0% | |
GCTTGTGGGAAGCAGCTCAT+AGG | + | chr3_1:78940710-78940729 | Msa0378200:intron | 55.0% | |
TTGTGCGTAAACGGGGAGGA+GGG | - | chr3_1:78941022-78941041 | None:intergenic | 55.0% | |
ACTGCACATCTGTGAGGCAC+TGG | + | chr3_1:78941066-78941085 | Msa0378200:intron | 55.0% | |
GGATGTGGAGTTGCCAGCTT+CGG | + | chr3_1:78941338-78941357 | Msa0378200:CDS | 55.0% | |
ACAAAGAGGCTTCCCTTCCC+TGG | + | chr3_1:78941479-78941498 | Msa0378200:CDS | 55.0% | |
CAAAGAGGCTTCCCTTCCCT+GGG | + | chr3_1:78941480-78941499 | Msa0378200:CDS | 55.0% | |
!! | CTGAACAGAGTATTGCGGCC+TGG | + | chr3_1:78941972-78941991 | Msa0378200:CDS | 55.0% |
!! | AACAGAGTATTGCGGCCTGG+TGG | + | chr3_1:78941975-78941994 | Msa0378200:CDS | 55.0% |
GGTCACAGTGGCCAGAAAAG+TGG | + | chr3_1:78942710-78942729 | Msa0378200:CDS | 55.0% | |
GCAGCAAAATCTTCAGGGGC+CGG | - | chr3_1:78942799-78942818 | None:intergenic | 55.0% | |
GATCGGATTCTCAGGCCTGA+AGG | + | chr3_1:78943334-78943353 | Msa0378200:CDS | 55.0% | |
GGTAAAGTCCATGCAGTGGG+AGG | + | chr3_1:78943408-78943427 | Msa0378200:CDS | 55.0% | |
GGTTCGCATGACCTACTCCA+AGG | + | chr3_1:78943429-78943448 | Msa0378200:CDS | 55.0% | |
! | CAGCCGGAACCCAAGCATTT+TGG | - | chr3_1:78943549-78943568 | None:intergenic | 55.0% |
! | GGCACGTCCTCGTTTTGCAC+GGG | - | chr3_1:78939374-78939393 | None:intergenic | 60.0% |
GCAAAACGAGGACGTGCCTC+AGG | + | chr3_1:78939376-78939395 | Msa0378200:CDS | 60.0% | |
TGCCTGAGGATGCGACCAAG+GGG | + | chr3_1:78939498-78939517 | Msa0378200:CDS | 60.0% | |
CAGCTCCGAAGAGAAGTCGG+AGG | + | chr3_1:78939532-78939551 | Msa0378200:CDS | 60.0% | |
AGGCAGGTGGGAGGTTCTTC+AGG | - | chr3_1:78940130-78940149 | None:intergenic | 60.0% | |
AGAGAGACAAGGCAGGTGGG+AGG | - | chr3_1:78940139-78940158 | None:intergenic | 60.0% | |
TGTGCGTAAACGGGGAGGAG+GGG | - | chr3_1:78941021-78941040 | None:intergenic | 60.0% | |
GTTGTGCGTAAACGGGGAGG+AGG | - | chr3_1:78941023-78941042 | None:intergenic | 60.0% | |
CCTGTTGTGCGTAAACGGGG+AGG | - | chr3_1:78941026-78941045 | None:intergenic | 60.0% | |
CCTCCCCGTTTACGCACAAC+AGG | + | chr3_1:78941023-78941042 | Msa0378200:intron | 60.0% | |
TGTGGAGTTGCCAGCTTCGG+AGG | + | chr3_1:78941341-78941360 | Msa0378200:CDS | 60.0% | |
CAAGTGAACGCGGGTCACAG+TGG | + | chr3_1:78942698-78942717 | Msa0378200:CDS | 60.0% | |
!!! | AGCCTGGCTGGCCACTTTTC+TGG | - | chr3_1:78942724-78942743 | None:intergenic | 60.0% |
GGTACATTGGTCAGCCTGGC+TGG | - | chr3_1:78942736-78942755 | None:intergenic | 60.0% | |
CATGCGAACCTCCCACTGCA+TGG | - | chr3_1:78943419-78943438 | None:intergenic | 60.0% | |
GTGTCCAGAAGTCCACCTGG+CGG | + | chr3_1:78943470-78943489 | Msa0378200:CDS | 60.0% | |
GCCTGAGGATGCGACCAAGG+GGG | + | chr3_1:78939499-78939518 | Msa0378200:CDS | 65.0% | |
TCCCCCTTGGTCGCATCCTC+AGG | - | chr3_1:78939503-78939522 | None:intergenic | 65.0% | |
GCTCAGACTGAGCCCCGGAA+GGG | - | chr3_1:78939892-78939911 | None:intergenic | 65.0% | |
AGCTCAGACTGAGCCCCGGA+AGG | - | chr3_1:78939893-78939912 | None:intergenic | 65.0% | |
TGCGTAAACGGGGAGGAGGG+GGG | - | chr3_1:78941019-78941038 | None:intergenic | 65.0% | |
GTGCGTAAACGGGGAGGAGG+GGG | - | chr3_1:78941020-78941039 | None:intergenic | 65.0% | |
GGCCAGAAAAGTGGCCAGCC+AGG | + | chr3_1:78942719-78942738 | Msa0378200:CDS | 65.0% | |
! | TAGGCCGCCAGGTGGACTTC+TGG | - | chr3_1:78943477-78943496 | None:intergenic | 65.0% |
GAAGTCCACCTGGCGGCCTA+AGG | + | chr3_1:78943477-78943496 | Msa0378200:CDS | 65.0% | |
TGTCTCCTTAGGCCGCCAGG+TGG | - | chr3_1:78943485-78943504 | None:intergenic | 65.0% | |
CTCTGTCTCCTTAGGCCGCC+AGG | - | chr3_1:78943488-78943507 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 78938326 | 78943942 | 78938326 | ID=Msa0378200;Name=Msa0378200 |
chr3_1 | mRNA | 78938326 | 78943942 | 78938326 | ID=Msa0378200-mRNA-1;Parent=Msa0378200;Name=Msa0378200-mRNA-1;_AED=0.06;_eAED=0.06;_QI=428|1|1|1|0.87|0.77|9|411|789 |
chr3_1 | exon | 78938326 | 78938707 | 78938326 | ID=Msa0378200-mRNA-1:exon:19150;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78939196 | 78940207 | 78939196 | ID=Msa0378200-mRNA-1:exon:19151;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78940291 | 78940440 | 78940291 | ID=Msa0378200-mRNA-1:exon:19152;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78941287 | 78941557 | 78941287 | ID=Msa0378200-mRNA-1:exon:19153;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78941952 | 78942062 | 78941952 | ID=Msa0378200-mRNA-1:exon:19154;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78942146 | 78942320 | 78942146 | ID=Msa0378200-mRNA-1:exon:19155;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78942654 | 78942926 | 78942654 | ID=Msa0378200-mRNA-1:exon:19156;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78943023 | 78943217 | 78943023 | ID=Msa0378200-mRNA-1:exon:19157;Parent=Msa0378200-mRNA-1 |
chr3_1 | exon | 78943303 | 78943942 | 78943303 | ID=Msa0378200-mRNA-1:exon:19158;Parent=Msa0378200-mRNA-1 |
chr3_1 | five_prime_UTR | 78938326 | 78938707 | 78938326 | ID=Msa0378200-mRNA-1:five_prime_utr;Parent=Msa0378200-mRNA-1 |
chr3_1 | five_prime_UTR | 78939196 | 78939241 | 78939196 | ID=Msa0378200-mRNA-1:five_prime_utr;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78939242 | 78940207 | 78939242 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78940291 | 78940440 | 78940291 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78941287 | 78941557 | 78941287 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78941952 | 78942062 | 78941952 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78942146 | 78942320 | 78942146 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78942654 | 78942926 | 78942654 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78943023 | 78943217 | 78943023 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | CDS | 78943303 | 78943531 | 78943303 | ID=Msa0378200-mRNA-1:cds;Parent=Msa0378200-mRNA-1 |
chr3_1 | three_prime_UTR | 78943532 | 78943942 | 78943532 | ID=Msa0378200-mRNA-1:three_prime_utr;Parent=Msa0378200-mRNA-1 |
Gene Sequence |
Protein sequence |