Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462630 | XP_003602637.1 | 98.986 | 789 | 8 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462630 | sp|Q8L7V3|PMTQ_ARATH | 64.671 | 835 | 241 | 9 | 1 | 788 | 1 | 828 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462630 | G7JC39 | 98.986 | 789 | 8 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1619 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0656320 | Msa1462630 | 0.815467 | 9.107540e-52 | -8.615850e-47 |
| Msa0378200 | Msa1462630 | 0.822016 | 2.967710e-53 | -8.615850e-47 |
| Msa0427420 | Msa1462630 | 0.873115 | 1.888146e-67 | -8.615850e-47 |
| Msa0427480 | Msa1462630 | 0.858942 | 5.824707e-63 | -8.615850e-47 |
| Msa0518320 | Msa1462630 | 0.817457 | 3.265542e-52 | -8.615850e-47 |
| Msa0523520 | Msa1462630 | 0.832215 | 1.073351e-55 | -8.615850e-47 |
| Msa0968210 | Msa1462630 | 0.805571 | 1.251635e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462630 | MtrunA17_Chr3g0130381 | 98.986 | 789 | 8 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1619 |
| Msa1462630 | MtrunA17_Chr8g0384431 | 71.533 | 822 | 179 | 9 | 1 | 788 | 1 | 801 | 0.0 | 1213 |
| Msa1462630 | MtrunA17_Chr3g0125511 | 57.538 | 796 | 288 | 12 | 1 | 788 | 1 | 754 | 0.0 | 945 |
| Msa1462630 | MtrunA17_Chr8g0372471 | 56.088 | 731 | 279 | 8 | 76 | 778 | 176 | 892 | 0.0 | 850 |
| Msa1462630 | MtrunA17_Chr5g0437501 | 52.574 | 544 | 240 | 4 | 242 | 778 | 75 | 607 | 0.0 | 625 |
| Msa1462630 | MtrunA17_Chr3g0113981 | 54.685 | 523 | 222 | 5 | 257 | 779 | 164 | 671 | 0.0 | 608 |
| Msa1462630 | MtrunA17_Chr1g0155141 | 50.473 | 529 | 240 | 5 | 252 | 778 | 193 | 701 | 0.0 | 590 |
| Msa1462630 | MtrunA17_Chr5g0404771 | 49.742 | 581 | 217 | 10 | 1 | 513 | 1 | 574 | 1.66e-177 | 521 |
| Msa1462630 | MtrunA17_Chr1g0159741 | 49.307 | 505 | 238 | 10 | 258 | 755 | 141 | 634 | 2.38e-170 | 506 |
| Msa1462630 | MtrunA17_Chr3g0112341 | 48.089 | 497 | 242 | 8 | 268 | 759 | 162 | 647 | 9.62e-169 | 502 |
| Msa1462630 | MtrunA17_Chr5g0435751 | 43.400 | 553 | 267 | 12 | 221 | 759 | 79 | 599 | 3.48e-154 | 463 |
| Msa1462630 | MtrunA17_Chr1g0167381 | 46.310 | 542 | 251 | 16 | 268 | 787 | 101 | 624 | 2.11e-152 | 459 |
| Msa1462630 | MtrunA17_Chr1g0183721 | 46.067 | 534 | 254 | 14 | 268 | 781 | 71 | 590 | 1.40e-149 | 451 |
| Msa1462630 | MtrunA17_Chr8g0350351 | 43.021 | 523 | 265 | 12 | 268 | 776 | 97 | 600 | 4.71e-145 | 439 |
| Msa1462630 | MtrunA17_Chr1g0187601 | 43.939 | 528 | 264 | 11 | 268 | 776 | 100 | 614 | 1.13e-143 | 436 |
| Msa1462630 | MtrunA17_Chr7g0246681 | 41.101 | 545 | 285 | 12 | 248 | 777 | 65 | 588 | 3.95e-142 | 431 |
| Msa1462630 | MtrunA17_Chr4g0055031 | 44.343 | 548 | 266 | 16 | 248 | 776 | 76 | 603 | 6.77e-142 | 431 |
| Msa1462630 | MtrunA17_Chr5g0404761 | 63.958 | 283 | 98 | 2 | 501 | 783 | 1 | 279 | 6.33e-140 | 414 |
| Msa1462630 | MtrunA17_Chr6g0472571 | 42.561 | 531 | 265 | 16 | 268 | 776 | 114 | 626 | 8.41e-138 | 421 |
| Msa1462630 | MtrunA17_Chr8g0388881 | 42.056 | 535 | 276 | 14 | 261 | 776 | 101 | 620 | 9.80e-138 | 421 |
| Msa1462630 | MtrunA17_Chr5g0409411 | 42.697 | 534 | 267 | 14 | 268 | 781 | 81 | 595 | 3.02e-137 | 419 |
| Msa1462630 | MtrunA17_Chr8g0369481 | 42.045 | 528 | 269 | 12 | 268 | 776 | 79 | 588 | 5.46e-137 | 418 |
| Msa1462630 | MtrunA17_Chr1g0203741 | 41.696 | 566 | 290 | 18 | 234 | 776 | 69 | 617 | 1.01e-135 | 416 |
| Msa1462630 | MtrunA17_Chr7g0214551 | 44.856 | 486 | 244 | 8 | 286 | 756 | 68 | 544 | 1.34e-135 | 414 |
| Msa1462630 | MtrunA17_Chr8g0361791 | 42.077 | 549 | 278 | 18 | 247 | 776 | 73 | 600 | 2.46e-132 | 406 |
| Msa1462630 | MtrunA17_Chr8g0350391 | 41.002 | 539 | 278 | 16 | 268 | 782 | 114 | 636 | 1.33e-130 | 403 |
| Msa1462630 | MtrunA17_Chr7g0246701 | 40.426 | 564 | 292 | 19 | 244 | 782 | 87 | 631 | 3.60e-129 | 399 |
| Msa1462630 | MtrunA17_Chr5g0416991 | 41.935 | 527 | 268 | 14 | 268 | 776 | 93 | 599 | 1.35e-128 | 397 |
| Msa1462630 | MtrunA17_Chr3g0092501 | 41.760 | 534 | 270 | 16 | 268 | 783 | 94 | 604 | 1.88e-127 | 394 |
| Msa1462630 | MtrunA17_Chr1g0171781 | 39.700 | 534 | 272 | 14 | 268 | 776 | 95 | 603 | 8.88e-117 | 366 |
| Msa1462630 | MtrunA17_Chr5g0426281 | 33.275 | 571 | 310 | 18 | 247 | 777 | 132 | 671 | 1.43e-91 | 301 |
| Msa1462630 | MtrunA17_Chr3g0115931 | 34.286 | 525 | 286 | 17 | 292 | 777 | 185 | 689 | 6.61e-86 | 286 |
| Msa1462630 | MtrunA17_Chr4g0043131 | 46.853 | 143 | 70 | 3 | 634 | 770 | 36 | 178 | 5.34e-38 | 140 |
| Msa1462630 | MtrunA17_Chr4g0043121 | 30.892 | 314 | 190 | 10 | 268 | 566 | 95 | 396 | 4.80e-37 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462630 | AT5G64030.1 | 64.671 | 835 | 241 | 9 | 1 | 788 | 1 | 828 | 0.0 | 1105 |
| Msa1462630 | AT1G29470.1 | 64.430 | 790 | 260 | 10 | 1 | 789 | 1 | 770 | 0.0 | 1037 |
| Msa1462630 | AT1G29470.2 | 64.430 | 790 | 260 | 10 | 1 | 789 | 1 | 770 | 0.0 | 1037 |
| Msa1462630 | AT2G34300.2 | 60.979 | 797 | 276 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1005 |
| Msa1462630 | AT2G34300.3 | 60.979 | 797 | 276 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1005 |
| Msa1462630 | AT2G34300.1 | 60.979 | 797 | 276 | 9 | 1 | 789 | 1 | 770 | 0.0 | 1005 |
| Msa1462630 | AT3G51070.1 | 62.590 | 695 | 239 | 4 | 95 | 782 | 215 | 895 | 0.0 | 942 |
| Msa1462630 | AT3G51070.1 | 35.028 | 177 | 89 | 6 | 1 | 155 | 1 | 173 | 3.71e-17 | 86.7 |
| Msa1462630 | AT3G51070.2 | 63.317 | 627 | 209 | 4 | 95 | 714 | 215 | 827 | 0.0 | 859 |
| Msa1462630 | AT3G51070.2 | 35.028 | 177 | 89 | 6 | 1 | 155 | 1 | 173 | 3.56e-17 | 86.7 |
| Msa1462630 | AT2G40280.1 | 50.342 | 584 | 264 | 8 | 203 | 782 | 26 | 587 | 0.0 | 618 |
| Msa1462630 | AT3G56080.1 | 53.818 | 537 | 227 | 7 | 243 | 778 | 94 | 610 | 0.0 | 608 |
| Msa1462630 | AT1G19430.1 | 41.130 | 761 | 382 | 13 | 21 | 778 | 27 | 724 | 0.0 | 596 |
| Msa1462630 | AT1G19430.3 | 41.130 | 761 | 382 | 13 | 21 | 778 | 27 | 724 | 0.0 | 596 |
| Msa1462630 | AT3G56080.2 | 55.180 | 473 | 195 | 6 | 243 | 714 | 94 | 550 | 0.0 | 554 |
| Msa1462630 | AT1G77260.1 | 45.144 | 556 | 276 | 10 | 217 | 755 | 88 | 631 | 1.54e-172 | 512 |
| Msa1462630 | AT5G06050.1 | 45.975 | 559 | 265 | 15 | 224 | 759 | 99 | 643 | 2.09e-171 | 510 |
| Msa1462630 | AT2G39750.1 | 48.491 | 497 | 240 | 9 | 268 | 759 | 186 | 671 | 2.57e-170 | 508 |
| Msa1462630 | AT4G14360.1 | 45.924 | 503 | 243 | 12 | 268 | 756 | 85 | 572 | 1.17e-147 | 446 |
| Msa1462630 | AT4G14360.2 | 45.924 | 503 | 243 | 12 | 268 | 756 | 85 | 572 | 1.17e-147 | 446 |
| Msa1462630 | AT3G23300.2 | 44.569 | 534 | 261 | 13 | 268 | 781 | 88 | 606 | 1.33e-147 | 446 |
| Msa1462630 | AT3G23300.1 | 44.569 | 534 | 261 | 13 | 268 | 781 | 88 | 606 | 1.33e-147 | 446 |
| Msa1462630 | AT4G00740.1 | 42.146 | 522 | 269 | 10 | 270 | 777 | 92 | 594 | 1.64e-144 | 438 |
| Msa1462630 | AT4G00740.2 | 42.146 | 522 | 269 | 10 | 270 | 777 | 92 | 594 | 1.64e-144 | 438 |
| Msa1462630 | AT1G04430.1 | 45.562 | 507 | 239 | 14 | 268 | 756 | 93 | 580 | 8.14e-144 | 437 |
| Msa1462630 | AT1G04430.3 | 45.562 | 507 | 239 | 14 | 268 | 756 | 93 | 580 | 8.14e-144 | 437 |
| Msa1462630 | AT1G04430.2 | 45.562 | 507 | 239 | 14 | 268 | 756 | 93 | 580 | 8.14e-144 | 437 |
| Msa1462630 | AT1G31850.1 | 42.804 | 535 | 257 | 15 | 268 | 776 | 85 | 596 | 7.32e-142 | 431 |
| Msa1462630 | AT1G31850.2 | 42.804 | 535 | 257 | 15 | 268 | 776 | 85 | 596 | 7.32e-142 | 431 |
| Msa1462630 | AT1G31850.4 | 42.804 | 535 | 257 | 15 | 268 | 776 | 85 | 596 | 7.32e-142 | 431 |
| Msa1462630 | AT1G31850.3 | 42.804 | 535 | 257 | 15 | 268 | 776 | 85 | 596 | 7.32e-142 | 431 |
| Msa1462630 | AT4G10440.1 | 41.007 | 556 | 293 | 14 | 241 | 776 | 76 | 616 | 1.26e-139 | 426 |
| Msa1462630 | AT1G33170.1 | 41.547 | 556 | 291 | 13 | 241 | 776 | 93 | 634 | 1.76e-139 | 426 |
| Msa1462630 | AT4G19120.1 | 42.537 | 536 | 257 | 15 | 268 | 776 | 79 | 590 | 5.54e-139 | 424 |
| Msa1462630 | AT4G19120.2 | 42.537 | 536 | 257 | 15 | 268 | 776 | 79 | 590 | 5.54e-139 | 424 |
| Msa1462630 | AT5G14430.1 | 45.941 | 505 | 240 | 13 | 268 | 756 | 89 | 576 | 5.67e-136 | 416 |
| Msa1462630 | AT1G26850.2 | 42.724 | 536 | 272 | 15 | 268 | 783 | 95 | 615 | 9.71e-136 | 416 |
| Msa1462630 | AT1G26850.1 | 42.724 | 536 | 272 | 15 | 268 | 783 | 95 | 615 | 9.71e-136 | 416 |
| Msa1462630 | AT1G19430.2 | 36.551 | 632 | 336 | 12 | 21 | 650 | 27 | 595 | 5.66e-134 | 411 |
| Msa1462630 | AT5G14430.2 | 45.347 | 505 | 243 | 13 | 268 | 756 | 89 | 576 | 1.11e-133 | 410 |
| Msa1462630 | AT2G45750.1 | 41.882 | 542 | 262 | 19 | 271 | 788 | 99 | 611 | 2.95e-132 | 407 |
| Msa1462630 | AT4G00750.1 | 41.051 | 514 | 260 | 18 | 290 | 776 | 125 | 622 | 1.24e-126 | 393 |
| Msa1462630 | AT2G43200.2 | 42.209 | 507 | 262 | 13 | 268 | 759 | 100 | 590 | 2.41e-126 | 391 |
| Msa1462630 | AT2G43200.1 | 42.209 | 507 | 262 | 13 | 268 | 759 | 100 | 590 | 2.41e-126 | 391 |
| Msa1462630 | AT5G04060.1 | 41.935 | 527 | 267 | 12 | 268 | 776 | 92 | 597 | 1.39e-125 | 389 |
| Msa1462630 | AT4G18030.1 | 41.405 | 541 | 275 | 15 | 257 | 776 | 84 | 603 | 1.96e-125 | 389 |
| Msa1462630 | AT3G10200.1 | 41.176 | 527 | 273 | 14 | 268 | 776 | 81 | 588 | 1.58e-123 | 383 |
| Msa1462630 | AT3G10200.2 | 41.046 | 497 | 259 | 13 | 268 | 749 | 81 | 558 | 2.11e-116 | 365 |
| Msa1462630 | AT4G19120.3 | 42.247 | 445 | 209 | 14 | 268 | 688 | 79 | 499 | 1.16e-107 | 339 |
| Msa1462630 | AT1G26850.3 | 41.204 | 432 | 216 | 14 | 268 | 684 | 95 | 503 | 1.04e-92 | 300 |
| Msa1462630 | AT1G78240.1 | 31.579 | 570 | 322 | 19 | 247 | 773 | 132 | 676 | 2.00e-84 | 283 |
| Msa1462630 | AT1G78240.2 | 31.579 | 570 | 322 | 19 | 247 | 773 | 132 | 676 | 2.00e-84 | 283 |
| Msa1462630 | AT1G13860.4 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 4.98e-79 | 266 |
| Msa1462630 | AT1G13860.3 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 4.98e-79 | 266 |
| Msa1462630 | AT1G13860.1 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 4.98e-79 | 266 |
| Msa1462630 | AT1G13860.5 | 33.948 | 542 | 289 | 19 | 268 | 773 | 90 | 598 | 4.98e-79 | 266 |
| Msa1462630 | AT1G13860.2 | 36.779 | 416 | 218 | 14 | 384 | 773 | 46 | 442 | 2.61e-74 | 249 |
| Msa1462630 | AT2G03480.2 | 34.221 | 526 | 294 | 17 | 269 | 773 | 96 | 590 | 8.39e-74 | 252 |
| Msa1462630 | AT2G03480.1 | 33.647 | 532 | 300 | 17 | 269 | 773 | 96 | 601 | 3.37e-73 | 251 |
| Msa1462630 | AT2G03480.3 | 32.166 | 314 | 184 | 10 | 269 | 566 | 96 | 396 | 2.15e-33 | 134 |
Find 257 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAAGATTTGAATATT+TGG | 0.164392 | tig0042468:-1217 | Msa1462630:CDS |
| CAGCCGGAACCCAAGTATTT+TGG | 0.216585 | tig0042468:+705 | Msa1462630:intergenic |
| TGCAGGTGGTAAACTTCTTT+TGG | 0.230174 | tig0042468:-2296 | Msa1462630:intron |
| CTTAGCCGCATGTGTTTCTT+TGG | 0.274924 | tig0042468:-5925 | Msa1462630:five_prime_UTR |
| CTCATTTGAACTCTGGTCTT+TGG | 0.275650 | tig0042468:+4380 | Msa1462630:intergenic |
| TTTATGCAACTGAATATATA+TGG | 0.276535 | tig0042468:-419 | Msa1462630:three_prime_UTR |
| GGATAGTGGCTTCTTGTATA+TGG | 0.279107 | tig0042468:+2019 | Msa1462630:intergenic |
| AAGACCCCGTTCATAAATAA+TGG | 0.282831 | tig0042468:+1154 | Msa1462630:intergenic |
| CTCTAGCCTTGATTGGGGTT+TGG | 0.283882 | tig0042468:-4917 | Msa1462630:CDS |
| CGATCCGAAGACATGGCTTT+AGG | 0.286464 | tig0042468:-5011 | Msa1462630:exon |
| TCAGGAAGCTTCTGATAAAT+AGG | 0.293202 | tig0042468:+2223 | Msa1462630:intergenic |
| TAGGCCGCCAGGTGGACTTC+TGG | 0.299464 | tig0042468:+777 | Msa1462630:intergenic |
| TTCCATATTTCAACATCTTC+AGG | 0.299746 | tig0042468:+2205 | Msa1462630:intergenic |
| TTATCAGCAGCAAAATCTTC+AGG | 0.304087 | tig0042468:+1441 | Msa1462630:intergenic |
| ATCAGCAAGGATCAAGTTAA+TGG | 0.304469 | tig0042468:-2053 | Msa1462630:CDS |
| TTTGTTGCTCTAGCCTTGAT+TGG | 0.306385 | tig0042468:-4924 | Msa1462630:CDS |
| AAGTTAAGGGGCATCAAAAT+TGG | 0.309838 | tig0042468:-3915 | Msa1462630:CDS |
| GACTCTGCCTGACATTGCTT+GGG | 0.309960 | tig0042468:-2957 | Msa1462630:CDS |
| AGGCAGGTGGGAGGTTCTTC+AGG | 0.312570 | tig0042468:+4114 | Msa1462630:intergenic |
| GGGAAATATTCTAGAGTAGA+TGG | 0.314502 | tig0042468:-4990 | Msa1462630:CDS |
| TGAGCTTCATGTTCATCCTT+TGG | 0.318842 | tig0042468:+2839 | Msa1462630:intergenic |
| TTATCCCATGCCTTGACAAC+TGG | 0.320818 | tig0042468:-4194 | Msa1462630:CDS |
| TTTGAAAGATTTGAATATTT+GGG | 0.321547 | tig0042468:-1216 | Msa1462630:CDS |
| CACTAAGCTTGCTGAAGTTA+AGG | 0.329223 | tig0042468:-3929 | Msa1462630:CDS |
| TTCTCGATGTTCATAGTGTT+TGG | 0.341847 | tig0042468:+4146 | Msa1462630:intergenic |
| TTCCTGAAGATGTTGAAATA+TGG | 0.348064 | tig0042468:-2207 | Msa1462630:CDS |
| CCTTCCCATTATTTATGAAC+GGG | 0.357509 | tig0042468:-1159 | Msa1462630:CDS |
| TCAAATGAGGTATTCCCTTC+CGG | 0.367877 | tig0042468:-4366 | Msa1462630:CDS |
| TGGGAACTTGACAACCAATA+TGG | 0.368562 | tig0042468:+1489 | Msa1462630:intergenic |
| CTTTATTTATATTTAGAGAT+TGG | 0.369394 | tig0042468:-581 | Msa1462630:three_prime_UTR |
| CAAATGAGGTATTCCCTTCC+GGG | 0.376544 | tig0042468:-4365 | Msa1462630:CDS |
| ATGGATATGAACTCAATCTA+TGG | 0.377899 | tig0042468:-1342 | Msa1462630:CDS |
| AATGAAACTACGACACAAAC+TGG | 0.384495 | tig0042468:-4324 | Msa1462630:CDS |
| CTTCTATAATATGGTGCCAT+AGG | 0.385741 | tig0042468:-552 | Msa1462630:three_prime_UTR |
| AGTTCCCAAGTTGGAGTCTA+TGG | 0.386840 | tig0042468:-1474 | Msa1462630:CDS |
| TTGTTGCTCTAGCCTTGATT+GGG | 0.386986 | tig0042468:-4923 | Msa1462630:CDS |
| ATAGAGCGCTTATATCCTTC+AGG | 0.387610 | tig0042468:+4081 | Msa1462630:intergenic |
| AGACTCTGCCTGACATTGCT+TGG | 0.390574 | tig0042468:-2958 | Msa1462630:CDS |
| GATCCGAAGACATGGCTTTA+GGG | 0.392712 | tig0042468:-5010 | Msa1462630:exon |
| CCGCGTTCACTTGAACTAAC+TGG | 0.395097 | tig0042468:+1555 | Msa1462630:intergenic |
| CAATCTCTAAATATAAATAA+AGG | 0.395280 | tig0042468:+582 | Msa1462630:intergenic |
| TTTGACAGTGTGTGAATGTT+GGG | 0.397887 | tig0042468:+5659 | Msa1462630:intergenic |
| GGATGAGATGCCAAAATACT+TGG | 0.398733 | tig0042468:-715 | Msa1462630:three_prime_UTR |
| TCAAAATTGGGTGAAAGTTA+CGG | 0.401724 | tig0042468:-3902 | Msa1462630:CDS |
| CCTCCAAGACTGGGTACAAT+TGG | 0.405008 | tig0042468:-4248 | Msa1462630:CDS |
| ACAAAGAGGCTTCCCTTCCC+TGG | 0.407202 | tig0042468:-2764 | Msa1462630:CDS |
| CAAAATTGGGTGAAAGTTAC+GGG | 0.407429 | tig0042468:-3901 | Msa1462630:CDS |
| CTCTGTCTCCTTAGGCCGCC+AGG | 0.410259 | tig0042468:+766 | Msa1462630:intergenic |
| GAAGTGCCCCATGCTTGAAT+TGG | 0.410323 | tig0042468:+3848 | Msa1462630:intergenic |
| AGTACTACTAATTGTGACTT+TGG | 0.411639 | tig0042468:-5738 | Msa1462630:five_prime_UTR |
| ATTCAAGAGTCCTCCAAGAC+TGG | 0.418254 | tig0042468:-4258 | Msa1462630:CDS |
| ATGCCAAAATACTTGGGTTC+CGG | 0.419246 | tig0042468:-708 | Msa1462630:three_prime_UTR |
| CAAGTCTTATCTAAACGGAT+TGG | 0.419452 | tig0042468:-1394 | Msa1462630:CDS |
| CCTGCTATATCTGCTGTAAT+GGG | 0.421591 | tig0042468:-2788 | Msa1462630:CDS |
| TCCTGCTATATCTGCTGTAA+TGG | 0.421692 | tig0042468:-2789 | Msa1462630:CDS |
| GGAGGAGAGGGAGTGACTTA+AGG | 0.422154 | tig0042468:+5855 | Msa1462630:intergenic |
| CATTAACAAAATCAATATGC+TGG | 0.424608 | tig0042468:-2088 | Msa1462630:CDS |
| GGTACATTGGTCAGCCTGGC+TGG | 0.424736 | tig0042468:+1510 | Msa1462630:intergenic |
| GAGATTCGAAATTGAGAGAA+AGG | 0.427817 | tig0042468:+5634 | Msa1462630:intergenic |
| GGCTGACCAATGTACCATAT+TGG | 0.427892 | tig0042468:-1503 | Msa1462630:CDS |
| AGACCCCGTTCATAAATAAT+GGG | 0.428891 | tig0042468:+1155 | Msa1462630:intergenic |
| CAGATGCAATCTAGCTTCTC+TGG | 0.430244 | tig0042468:-951 | Msa1462630:CDS |
| ACTAAGCTTGCTGAAGTTAA+GGG | 0.433369 | tig0042468:-3928 | Msa1462630:CDS |
| TTGACAACTGGAAAGCGATT+AGG | 0.436526 | tig0042468:-4182 | Msa1462630:CDS |
| TTTCCAATTGTACCCAGTCT+TGG | 0.437033 | tig0042468:+4245 | Msa1462630:intergenic |
| TAATTGAGTAGTTATTGATC+AGG | 0.441245 | tig0042468:-5056 | Msa1462630:intron |
| TCATAACAATCATTGGATAG+TGG | 0.441820 | tig0042468:+2005 | Msa1462630:intergenic |
| TCGTTGCTCATAACAATCAT+TGG | 0.446283 | tig0042468:+1998 | Msa1462630:intergenic |
| TGTCAGCTCCGAAGAGAAAT+CGG | 0.447270 | tig0042468:-4712 | Msa1462630:CDS |
| CTGAGGTTGATCGGATTCTC+AGG | 0.448079 | tig0042468:-925 | Msa1462630:CDS |
| GGCCAGAAAAGTGGCCAGCC+AGG | 0.448570 | tig0042468:-1524 | Msa1462630:CDS |
| GTGTCCAAGTCTTATCTAAA+CGG | 0.458820 | tig0042468:-1399 | Msa1462630:CDS |
| TCAAGGCATGGGATAAAGTC+GGG | 0.458938 | tig0042468:+4201 | Msa1462630:intergenic |
| CAATCCGTTTAGATAAGACT+TGG | 0.459235 | tig0042468:+1395 | Msa1462630:intergenic |
| AACTAAACTCTCTCTTCCTT+CGG | 0.459892 | tig0042468:-5698 | Msa1462630:five_prime_UTR |
| GAAGGAATACCATGCTGCAT+TGG | 0.460905 | tig0042468:+1935 | Msa1462630:intergenic |
| CTCTGGTAGCTGAGGTTGAT+CGG | 0.463097 | tig0042468:-934 | Msa1462630:CDS |
| AAGGAATACCATGCTGCATT+GGG | 0.465896 | tig0042468:+1936 | Msa1462630:intergenic |
| AGGTTCAATTTGCTCTTGAG+AGG | 0.466968 | tig0042468:-2817 | Msa1462630:CDS |
| AAGTCTTATCTAAACGGATT+GGG | 0.468240 | tig0042468:-1393 | Msa1462630:CDS |
| CGTTTGCCCCAAGCAATGTC+AGG | 0.469178 | tig0042468:+2950 | Msa1462630:intergenic |
| CCAATTGTACCCAGTCTTGG+AGG | 0.469573 | tig0042468:+4248 | Msa1462630:intergenic |
| TTGAGTGTCTCTGTCTCCTT+AGG | 0.471291 | tig0042468:+758 | Msa1462630:intergenic |
| AAAGAGAAAGCCTCCGAAGC+TGG | 0.471336 | tig0042468:+2892 | Msa1462630:intergenic |
| TGAAAAGAAAGATGAATCAG+AGG | 0.472280 | tig0042468:-4550 | Msa1462630:CDS |
| CAGCGAAGAGGCGTCTACTA+AGG | 0.476422 | tig0042468:-4592 | Msa1462630:CDS |
| CGGACAATAAGCTTTCCTTC+AGG | 0.478801 | tig0042468:+902 | Msa1462630:intergenic |
| TTTCCCTAAAGCCATGTCTT+CGG | 0.479516 | tig0042468:+5007 | Msa1462630:intergenic |
| TAGTTAAGGGCCGGAGGAGA+GGG | 0.480840 | tig0042468:+5843 | Msa1462630:intergenic |
| GGATGTGGAGTTGCCAGCTT+CGG | 0.480928 | tig0042468:-2905 | Msa1462630:CDS |
| AGTTAAGGGGCATCAAAATT+GGG | 0.484810 | tig0042468:-3914 | Msa1462630:CDS |
| GGAAAGCGATTAGGAGTCTT+CGG | 0.484828 | tig0042468:-4173 | Msa1462630:CDS |
| CCCTTCCCATTATTTATGAA+CGG | 0.488962 | tig0042468:-1160 | Msa1462630:CDS |
| ATCAGATTTCCCTCACCCTA+TGG | 0.494214 | tig0042468:+536 | Msa1462630:intergenic |
| CAAAGAAACACATGCGGCTA+AGG | 0.495484 | tig0042468:+5926 | Msa1462630:intergenic |
| GCAACTGAATATATATGGAT+TGG | 0.496597 | tig0042468:-414 | Msa1462630:three_prime_UTR |
| GAGGGAGTGACTTAAGGAAG+AGG | 0.496847 | tig0042468:+5861 | Msa1462630:intergenic |
| GTTTGACAGTGTGTGAATGT+TGG | 0.496984 | tig0042468:+5658 | Msa1462630:intergenic |
| CTGAAGGAAAGCTTATTGTC+CGG | 0.497261 | tig0042468:-901 | Msa1462630:CDS |
| TAACAAACCCTCCTTATCCT+TGG | 0.499118 | tig0042468:+805 | Msa1462630:intergenic |
| AGAGTTCCATGGCACATTGA+AGG | 0.500328 | tig0042468:-2707 | Msa1462630:intron |
| CTGAATATATATGGATTGGA+CGG | 0.501522 | tig0042468:-410 | Msa1462630:three_prime_UTR |
| GCAAAATGAGGACGTGCCTC+AGG | 0.502310 | tig0042468:-4865 | Msa1462630:CDS |
| ATCAAATACTCTCCCAGGGA+AGG | 0.510333 | tig0042468:+2751 | Msa1462630:intergenic |
| CATGACCTACTCCAAGGATA+AGG | 0.511195 | tig0042468:-816 | Msa1462630:CDS |
| GAAGTCCACCTGGCGGCCTA+AGG | 0.514851 | tig0042468:-774 | Msa1462630:CDS |
| TTCTATAATATGGTGCCATA+GGG | 0.515066 | tig0042468:-551 | Msa1462630:three_prime_UTR |
| AAGTGCCCCATGCTTGAATT+GGG | 0.517462 | tig0042468:+3849 | Msa1462630:intergenic |
| TTGAATTGGGTTCCACCACC+AGG | 0.519299 | tig0042468:+3862 | Msa1462630:intergenic |
| AGCAGAGTCAAAGAATGAAA+AGG | 0.519819 | tig0042468:-4283 | Msa1462630:CDS |
| GCTTTCCAGTTGTCAAGGCA+TGG | 0.520419 | tig0042468:+4189 | Msa1462630:intergenic |
| TAATATGGTGCCATAGGGTG+AGG | 0.521259 | tig0042468:-546 | Msa1462630:three_prime_UTR |
| AGATAGTAATGTAGAGGAGA+AGG | 0.521421 | tig0042468:-4466 | Msa1462630:CDS |
| AAAGGATGAACATGAAGCTC+AGG | 0.523572 | tig0042468:-2837 | Msa1462630:CDS |
| AAAGTTTGTAATGTTACTGC+TGG | 0.523799 | tig0042468:-4225 | Msa1462630:CDS |
| TGCAATGTCACTTGCACCAA+AGG | 0.524307 | tig0042468:-2855 | Msa1462630:CDS |
| TATCAGCAGCAAAATCTTCA+GGG | 0.525199 | tig0042468:+1442 | Msa1462630:intergenic |
| ATGGAGGAGATCATACGTCC+TGG | 0.525368 | tig0042468:+1088 | Msa1462630:intergenic |
| TTCAATTTGCTCTTGAGAGG+GGG | 0.525841 | tig0042468:-2814 | Msa1462630:CDS |
| GTGGAACCCAATTCAAGCAT+GGG | 0.531941 | tig0042468:-3855 | Msa1462630:CDS |
| GGTTCAATTTGCTCTTGAGA+GGG | 0.532634 | tig0042468:-2816 | Msa1462630:CDS |
| TGCCTTGTCTCTCTTCCTGA+AGG | 0.535020 | tig0042468:-4096 | Msa1462630:CDS |
| AAGGATCAAGTTAATGGAGT+TGG | 0.537672 | tig0042468:-2047 | Msa1462630:CDS |
| GCAGCAAAATCTTCAGGGGC+CGG | 0.538266 | tig0042468:+1447 | Msa1462630:intergenic |
| CAAAGAGGCTTCCCTTCCCT+GGG | 0.538740 | tig0042468:-2763 | Msa1462630:CDS |
| TTAAGTCACTCCCTCTCCTC+CGG | 0.539629 | tig0042468:-5853 | Msa1462630:five_prime_UTR |
| CATCATCCAAACCCCAATCA+AGG | 0.540492 | tig0042468:+4911 | Msa1462630:intergenic |
| ACTGCATCAAATACTCTCCC+AGG | 0.541601 | tig0042468:+2746 | Msa1462630:intergenic |
| CGGCAGTTTGAAGATAATCC+TGG | 0.544215 | tig0042468:-4771 | Msa1462630:CDS |
| CATTGACGAGCTTGAGAGCA+TGG | 0.545018 | tig0042468:-864 | Msa1462630:CDS |
| AATGTCTCCCTCAGTCCTCA+TGG | 0.546910 | tig0042468:-5887 | Msa1462630:five_prime_UTR |
| ATATGGTACATTGGTCAGCC+TGG | 0.547368 | tig0042468:+1506 | Msa1462630:intergenic |
| ATATAAAATAAATAAATCAA+TGG | 0.548632 | tig0042468:+491 | Msa1462630:intergenic |
| TGAAGGAAAGCTTATTGTCC+GGG | 0.549044 | tig0042468:-900 | Msa1462630:CDS |
| TTACATTGACTTTATACAAG+AGG | 0.550306 | tig0042468:-3824 | Msa1462630:intron |
| AAATGATATATGACTAGTAG+TGG | 0.551153 | tig0042468:+656 | Msa1462630:intergenic |
| ATTAACAAAATCAATATGCT+GGG | 0.551786 | tig0042468:-2087 | Msa1462630:CDS |
| TGTAGTTCCCGTGCAAAATG+AGG | 0.552860 | tig0042468:-4877 | Msa1462630:CDS |
| GAGATCATACGTCCTGGGAT+AGG | 0.553125 | tig0042468:+1094 | Msa1462630:intergenic |
| TTGCCTGAGGATGCGACCAA+GGG | 0.553259 | tig0042468:-4744 | Msa1462630:CDS |
| TGGTTGTCAAGTTCCCAAGT+TGG | 0.553335 | tig0042468:-1483 | Msa1462630:CDS |
| GGAATACCTCATTTGAACTC+TGG | 0.553898 | tig0042468:+4373 | Msa1462630:intergenic |
| TAGCAAGAAGCAGATCTAAG+AGG | 0.553942 | tig0042468:+5565 | Msa1462630:intergenic |
| CTTTCCAGTTGTCAAGGCAT+GGG | 0.554013 | tig0042468:+4190 | Msa1462630:intergenic |
| GGTCACAGTGGCCAGAAAAG+TGG | 0.554071 | tig0042468:-1533 | Msa1462630:CDS |
| TGAATATATATGGATTGGAC+GGG | 0.554603 | tig0042468:-409 | Msa1462630:three_prime_UTR |
| TGTGGAGTTGCCAGCTTCGG+AGG | 0.557116 | tig0042468:-2902 | Msa1462630:CDS |
| CCCATTACAGCAGATATAGC+AGG | 0.558260 | tig0042468:+2788 | Msa1462630:intergenic |
| CAGATCTAAGAGGAAGATGA+AGG | 0.561247 | tig0042468:+5575 | Msa1462630:intergenic |
| GGTAAGAAAACAGAAGATGA+AGG | 0.565006 | tig0042468:-4639 | Msa1462630:CDS |
| GAATTCAGTGGTCAAATGTA+CGG | 0.565252 | tig0042468:-1371 | Msa1462630:CDS |
| CCCGTTCATAAATAATGGGA+AGG | 0.566248 | tig0042468:+1159 | Msa1462630:intergenic |
| AGCTCAGACTGAGCCCCGGA+AGG | 0.566755 | tig0042468:+4351 | Msa1462630:intergenic |
| GTCAAGGCATGGGATAAAGT+CGG | 0.567476 | tig0042468:+4200 | Msa1462630:intergenic |
| AATATTCTAGAGTAGATGGT+AGG | 0.569169 | tig0042468:-4986 | Msa1462630:CDS |
| GATCGGATTCTCAGGCCTGA+AGG | 0.569364 | tig0042468:-917 | Msa1462630:CDS |
| CTGAACAGAGTATTGCGGCC+TGG | 0.570629 | tig0042468:-2271 | Msa1462630:CDS |
| AGTTGGAGTCTATGGTAAGC+CGG | 0.573432 | tig0042468:-1466 | Msa1462630:CDS |
| GGTGGAACCCAATTCAAGCA+TGG | 0.579009 | tig0042468:-3856 | Msa1462630:CDS |
| ATAGTTAAGGGCCGGAGGAG+AGG | 0.579248 | tig0042468:+5842 | Msa1462630:intergenic |
| TCTAGCTTCTCTGGTAGCTG+AGG | 0.579746 | tig0042468:-942 | Msa1462630:CDS |
| TAATCGCTTTCCAGTTGTCA+AGG | 0.579902 | tig0042468:+4184 | Msa1462630:intergenic |
| TAGTAATGTAGAGGAGAAGG+TGG | 0.580767 | tig0042468:-4463 | Msa1462630:CDS |
| CATGCGAACCTCCCACTGCA+TGG | 0.581028 | tig0042468:+835 | Msa1462630:intergenic |
| TCAAATACTCTCCCAGGGAA+GGG | 0.581519 | tig0042468:+2752 | Msa1462630:intergenic |
| GCATCCTCAGGCAAATCACC+AGG | 0.581534 | tig0042468:+4753 | Msa1462630:intergenic |
| AGGAAGAGAGACAAGGCAGG+TGG | 0.585497 | tig0042468:+4101 | Msa1462630:intergenic |
| TGAATACCTTCAATGTGCCA+TGG | 0.585774 | tig0042468:+2701 | Msa1462630:intergenic |
| TATTGTCCGGGACACTGTTG+AGG | 0.586039 | tig0042468:-888 | Msa1462630:CDS |
| GTGAGGTCGATCCGAAGACA+TGG | 0.587047 | tig0042468:-5018 | Msa1462630:exon |
| CTTCCCATTATTTATGAACG+GGG | 0.587916 | tig0042468:-1158 | Msa1462630:CDS |
| CTTACCATAGACTCCAACTT+GGG | 0.588345 | tig0042468:+1470 | Msa1462630:intergenic |
| TGACAACCAATATGGTACAT+TGG | 0.589602 | tig0042468:+1497 | Msa1462630:intergenic |
| CAAAGACCAGAGTTCAAATG+AGG | 0.590021 | tig0042468:-4379 | Msa1462630:CDS |
| GTTATACTAGATGTTGGATG+TGG | 0.591044 | tig0042468:-2920 | Msa1462630:CDS |
| GACCTACTCCAAGGATAAGG+AGG | 0.591238 | tig0042468:-813 | Msa1462630:CDS |
| TTCAAGAGTCCTCCAAGACT+GGG | 0.592523 | tig0042468:-4257 | Msa1462630:CDS |
| GATATGAACTCAATCTATGG+AGG | 0.592603 | tig0042468:-1339 | Msa1462630:CDS |
| GCTCAGACTGAGCCCCGGAA+GGG | 0.594249 | tig0042468:+4352 | Msa1462630:intergenic |
| AGAGGAAACCATGAGGACTG+AGG | 0.594667 | tig0042468:+5879 | Msa1462630:intergenic |
| TGGAGGAGATCATACGTCCT+GGG | 0.597705 | tig0042468:+1089 | Msa1462630:intergenic |
| CAATGACCTCAACAGTGTCC+CGG | 0.598078 | tig0042468:+882 | Msa1462630:intergenic |
| TTGCTGCTGATAATAAACAC+TGG | 0.598168 | tig0042468:-1431 | Msa1462630:CDS |
| GTCAAATGTACGGAATGTCA+TGG | 0.602207 | tig0042468:-1361 | Msa1462630:CDS |
| GTGCACGTTGTAGAGTTCCA+TGG | 0.602530 | tig0042468:-2718 | Msa1462630:CDS |
| CTAAGCTTGCTGAAGTTAAG+GGG | 0.603146 | tig0042468:-3927 | Msa1462630:CDS |
| GGAAGAGAGACAAGGCAGGT+GGG | 0.603261 | tig0042468:+4102 | Msa1462630:intergenic |
| GCTTACCATAGACTCCAACT+TGG | 0.604957 | tig0042468:+1469 | Msa1462630:intergenic |
| GAAGGAACAGACTGAGGTGA+GGG | 0.605363 | tig0042468:-4826 | Msa1462630:CDS |
| GAGGAAACCATGAGGACTGA+GGG | 0.605447 | tig0042468:+5880 | Msa1462630:intergenic |
| ATTCTGATTTAAATAGCCGA+AGG | 0.605888 | tig0042468:+5682 | Msa1462630:intergenic |
| GATATAAGCGCTCTATTGAG+TGG | 0.606444 | tig0042468:-4074 | Msa1462630:CDS |
| TTTGCCTGAGGATGCGACCA+AGG | 0.606923 | tig0042468:-4745 | Msa1462630:CDS |
| GTTCAATTTGCTCTTGAGAG+GGG | 0.608000 | tig0042468:-2815 | Msa1462630:CDS |
| AGTATGCTATTGTTTAAGCA+CGG | 0.608753 | tig0042468:-736 | Msa1462630:exon |
| TTCAGGAAGAGAGACAAGGC+AGG | 0.609303 | tig0042468:+4098 | Msa1462630:intergenic |
| GGAACTTGTTTCAATCAGCA+AGG | 0.612001 | tig0042468:-2066 | Msa1462630:CDS |
| TGGAGCTGAACAGAGTATTG+CGG | 0.613676 | tig0042468:-2276 | Msa1462630:CDS |
| AACAACAGATAGTAATGTAG+AGG | 0.614483 | tig0042468:-4472 | Msa1462630:CDS |
| AATCATTTAGCACCTATCCC+AGG | 0.615139 | tig0042468:-1106 | Msa1462630:CDS |
| AAATGAGGTATTCCCTTCCG+GGG | 0.618479 | tig0042468:-4364 | Msa1462630:CDS |
| AATATGGTGCCATAGGGTGA+GGG | 0.618599 | tig0042468:-545 | Msa1462630:three_prime_UTR |
| CCAGTTAGTTCAAGTGAACG+CGG | 0.619426 | tig0042468:-1555 | Msa1462630:CDS |
| TGAAGGAACAGACTGAGGTG+AGG | 0.620122 | tig0042468:-4827 | Msa1462630:CDS |
| TGTTGCTCTAGCCTTGATTG+GGG | 0.623280 | tig0042468:-4922 | Msa1462630:CDS |
| GTGGCCTAAAAGCAGAGAGA+AGG | 0.623669 | tig0042468:-4055 | Msa1462630:intron |
| ACACGTGTTATACTAGATGT+TGG | 0.623731 | tig0042468:-2926 | Msa1462630:CDS |
| CATGGTAAAGTCCATGCAGT+GGG | 0.624917 | tig0042468:-846 | Msa1462630:CDS |
| GAACTCTACAACGTGCACAA+TGG | 0.628195 | tig0042468:+2723 | Msa1462630:intergenic |
| TTGAAAAGAGATGATCTGCA+TGG | 0.628694 | tig0042468:+1069 | Msa1462630:intergenic |
| TAGAAGCTCAGACTGAGCCC+CGG | 0.630651 | tig0042468:+4347 | Msa1462630:intergenic |
| ACTTCAGCAAGCTTAGTGTG+TGG | 0.630986 | tig0042468:+3934 | Msa1462630:intergenic |
| ATATCAAAATTAATGACCAA+AGG | 0.631627 | tig0042468:+605 | Msa1462630:intergenic |
| GAAATCGGAGGAAAATTCCA+CGG | 0.635058 | tig0042468:-4697 | Msa1462630:CDS |
| CTGCTGTAATGGGCACAAAG+AGG | 0.637182 | tig0042468:-2778 | Msa1462630:CDS |
| CTGCATCAAATACTCTCCCA+GGG | 0.637623 | tig0042468:+2747 | Msa1462630:intergenic |
| GATGAGATGCCAAAATACTT+GGG | 0.638807 | tig0042468:-714 | Msa1462630:three_prime_UTR |
| ACTCTGCCTGACATTGCTTG+GGG | 0.639154 | tig0042468:-2956 | Msa1462630:CDS |
| GAAGATGTTGAAATATGGAA+TGG | 0.639298 | tig0042468:-2202 | Msa1462630:intron |
| CCGTTCATAAATAATGGGAA+GGG | 0.642519 | tig0042468:+1160 | Msa1462630:intergenic |
| GCTTCTTGCTATAGAACCAG+AGG | 0.645455 | tig0042468:-5553 | Msa1462630:intron |
| CTGATGATCCCAATGCAGCA+TGG | 0.648087 | tig0042468:-1944 | Msa1462630:intron |
| AAACTGATAATAGCAATGCT+CGG | 0.648882 | tig0042468:-4791 | Msa1462630:CDS |
| ATATGAACTCAATCTATGGA+GGG | 0.649955 | tig0042468:-1338 | Msa1462630:intron |
| GGTTCGCATGACCTACTCCA+AGG | 0.652153 | tig0042468:-822 | Msa1462630:CDS |
| CAAGTGAACGCGGGTCACAG+TGG | 0.652261 | tig0042468:-1545 | Msa1462630:CDS |
| ACCTACTCCAAGGATAAGGA+GGG | 0.652538 | tig0042468:-812 | Msa1462630:CDS |
| AGAGAGACAAGGCAGGTGGG+AGG | 0.652823 | tig0042468:+4105 | Msa1462630:intergenic |
| TATGTGTCCAGAAGTCCACC+TGG | 0.655480 | tig0042468:-784 | Msa1462630:CDS |
| AAAGAATCTGATGAAAACGC+TGG | 0.656465 | tig0042468:-4426 | Msa1462630:CDS |
| AACAGAGTATTGCGGCCTGG+TGG | 0.656543 | tig0042468:-2268 | Msa1462630:CDS |
| GGTAAAGTCCATGCAGTGGG+AGG | 0.657793 | tig0042468:-843 | Msa1462630:CDS |
| GCATGGTAAAGTCCATGCAG+TGG | 0.661920 | tig0042468:-847 | Msa1462630:CDS |
| TAAACGGATTGGGAATTCAG+TGG | 0.664896 | tig0042468:-1383 | Msa1462630:CDS |
| ACCCTCCTTATCCTTGGAGT+AGG | 0.669418 | tig0042468:+811 | Msa1462630:intergenic |
| CAAGGCATGGGATAAAGTCG+GGG | 0.669765 | tig0042468:+4202 | Msa1462630:intergenic |
| CAGTTAGTTCAAGTGAACGC+GGG | 0.672917 | tig0042468:-1554 | Msa1462630:CDS |
| ATCAGCAGCAAAATCTTCAG+GGG | 0.674815 | tig0042468:+1443 | Msa1462630:intergenic |
| ATCCTTCAGGAAGAGAGACA+AGG | 0.675474 | tig0042468:+4094 | Msa1462630:intergenic |
| AATAATGGGAAGGGTATCTG+CGG | 0.678257 | tig0042468:+1169 | Msa1462630:intergenic |
| AAATAACAAAGACAGCGAAG+AGG | 0.679636 | tig0042468:-4604 | Msa1462630:CDS |
| TGCCTGAGGATGCGACCAAG+GGG | 0.680547 | tig0042468:-4743 | Msa1462630:CDS |
| TGGAACCCAATTCAAGCATG+GGG | 0.686380 | tig0042468:-3854 | Msa1462630:CDS |
| GGTATAATTAATCATCTGTG+AGG | 0.690025 | tig0042468:-5035 | Msa1462630:five_prime_UTR |
| TGAGGTGAAGGAACAGACTG+AGG | 0.690937 | tig0042468:-4832 | Msa1462630:CDS |
| TGTCTCCTTAGGCCGCCAGG+TGG | 0.691172 | tig0042468:+769 | Msa1462630:intergenic |
| AGATACGAAGACAGAAGACG+AGG | 0.694255 | tig0042468:-4661 | Msa1462630:CDS |
| AAAAGAGATGATCTGCATGG+AGG | 0.700577 | tig0042468:+1072 | Msa1462630:intergenic |
| ATCTGAGCATTGTGTGAACG+CGG | 0.707613 | tig0042468:+5602 | Msa1462630:intergenic |
| ATCTTCAGAAGACTTCTCCG+TGG | 0.710231 | tig0042468:+4680 | Msa1462630:intergenic |
| GATACGAAGACAGAAGACGA+GGG | 0.710853 | tig0042468:-4660 | Msa1462630:CDS |
| GTGTCCAGAAGTCCACCTGG+CGG | 0.714703 | tig0042468:-781 | Msa1462630:CDS |
| ACTAACCAAAGAAACACATG+CGG | 0.719248 | tig0042468:+5920 | Msa1462630:intergenic |
| CAGCTCCGAAGAGAAATCGG+AGG | 0.722811 | tig0042468:-4709 | Msa1462630:CDS |
| TAATCCTGGTGATTTGCCTG+AGG | 0.728544 | tig0042468:-4757 | Msa1462630:CDS |
| GCCTGAGGATGCGACCAAGG+GGG | 0.732614 | tig0042468:-4742 | Msa1462630:CDS |
| TTAAGGAAGAGGAAACCATG+AGG | 0.751869 | tig0042468:+5872 | Msa1462610:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTACTAAAAAATAGTTAA+GGG | + | tig0042468:436-455 | Msa1462630:intergenic | 10.0% |
| !! | AAATTACTAAAAAATAGTTA+AGG | + | tig0042468:437-456 | Msa1462630:intergenic | 10.0% |
| !!! | ATTTTTTCTTTTTCTTAAAA+GGG | + | tig0042468:2611-2630 | Msa1462630:intergenic | 10.0% |
| !!! | TATTTTTTCTTTTTCTTAAA+AGG | + | tig0042468:2612-2631 | Msa1462630:intergenic | 10.0% |
| !!! | TATTTTTAACTTATTTTCGT+CGG | - | tig0042468:472-491 | Msa1462630:three_prime_UTR | 15.0% |
| !!! | CAATATTAACAGATTTTTAA+AGG | + | tig0042468:2649-2668 | Msa1462630:intergenic | 15.0% |
| !!! | CTTTAAAAATCTGTTAATAT+TGG | - | tig0042468:2647-2666 | Msa1462630:intron | 15.0% |
| !! | TAGAAATCTAAAAAAAGTTT+AGG | + | tig0042468:3217-3236 | Msa1462630:intergenic | 15.0% |
| !!! | ATTTTGAATCATATTCATTT+AGG | - | tig0042468:3632-3651 | Msa1462630:intron | 15.0% |
| !! | TGTTTAAATACATGTAAATA+AGG | + | tig0042468:3932-3951 | Msa1462630:intergenic | 15.0% |
| !!! | CAAAATCTAAATTTCTATTT+TGG | + | tig0042468:4375-4394 | Msa1462630:intergenic | 15.0% |
| !! | AACAAGTATAAAAATAAAAC+AGG | - | tig0042468:4517-4536 | Msa1462630:CDS | 15.0% |
| !! | ACAAGTATAAAAATAAAACA+GGG | - | tig0042468:4518-4537 | Msa1462630:CDS | 15.0% |
| !! | TTTGAAAGATTTGAATATTT+GGG | - | tig0042468:5047-5066 | Msa1462630:five_prime_UTR | 15.0% |
| !! | CAATCTCTAAATATAAATAA+AGG | + | tig0042468:5684-5703 | Msa1462630:intergenic | 15.0% |
| !!! | CTTTATTTATATTTAGAGAT+TGG | - | tig0042468:5682-5701 | Msa1462630:five_prime_UTR | 15.0% |
| !!! | AGGAGAAATAACATAATTTT+AGG | + | tig0042468:2287-2306 | Msa1462630:intergenic | 20.0% |
| !!! | CATTTTGTTTGGATTAAATT+TGG | - | tig0042468:2466-2485 | Msa1462630:intron | 20.0% |
| !!! | ACAAGTTAAACAGAAATTTT+TGG | + | tig0042468:2523-2542 | Msa1462630:intergenic | 20.0% |
| !! | ATATATTGATCTTGAAAGTT+CGG | + | tig0042468:2553-2572 | Msa1462630:intergenic | 20.0% |
| !! | TATCATAATAAAGAGAAACT+TGG | + | tig0042468:2767-2786 | Msa1462630:intergenic | 20.0% |
| !! | TACATTAAAATGCACAAAAA+AGG | + | tig0042468:4110-4129 | Msa1462630:intergenic | 20.0% |
| !!! | TTTTTTGTGCATTTTAATGT+AGG | - | tig0042468:4109-4128 | Msa1462630:CDS | 20.0% |
| !! | ATTAACAAAATCAATATGCT+GGG | - | tig0042468:4176-4195 | Msa1462630:CDS | 20.0% |
| !!! | CTTTGAAAGATTTGAATATT+TGG | - | tig0042468:5046-5065 | Msa1462630:five_prime_UTR | 20.0% |
| !!! | TTTTTGGTATATATCATGAT+TGG | - | tig0042468:5130-5149 | Msa1462630:intron | 20.0% |
| !!! | AGTCATATATCATTTTAGTT+AGG | - | tig0042468:5615-5634 | Msa1462630:five_prime_UTR | 20.0% |
| !! | ATATCAAAATTAATGACCAA+AGG | + | tig0042468:5661-5680 | Msa1462630:intergenic | 20.0% |
| !!! | TATTTTATATGCGTAATAGT+CGG | - | tig0042468:5785-5804 | Msa1462630:intron | 20.0% |
| !! | TTTATGCAACTGAATATATA+TGG | - | tig0042468:5844-5863 | Msa1462630:five_prime_UTR | 20.0% |
| ! | AATAAAATCGAACTAAGATG+CGG | + | tig0042468:910-929 | Msa1462630:intergenic | 25.0% |
| !! | AACGGTAAAAGTATAAGATA+TGG | + | tig0042468:1059-1078 | Msa1462630:intergenic | 25.0% |
| ! | GTAAAGTTGAATCAGTAAAA+CGG | + | tig0042468:1077-1096 | Msa1462630:intergenic | 25.0% |
| ! | TAAGACTTGAAACACAAATT+AGG | + | tig0042468:1185-1204 | Msa1462630:intergenic | 25.0% |
| ! | TAATTGAGTAGTTATTGATC+AGG | - | tig0042468:1207-1226 | Msa1462630:CDS | 25.0% |
| !!! | GTCTTTGTTATTTTCTGTAT+TGG | + | tig0042468:1652-1671 | Msa1462630:intergenic | 25.0% |
| !!! | TTACATTGACTTTATACAAG+AGG | - | tig0042468:2439-2458 | Msa1462630:intron | 25.0% |
| ! | TTTCTCTTTATTATGATACC+TGG | - | tig0042468:2769-2788 | Msa1462630:CDS | 25.0% |
| !! | ATCAATATCATGGTAAGTTT+TGG | + | tig0042468:3119-3138 | Msa1462630:intergenic | 25.0% |
| ! | ATGAAGGTAAATCAATATCA+TGG | + | tig0042468:3129-3148 | Msa1462630:intergenic | 25.0% |
| ! | TGTAGAAGATCATTTAATGA+AGG | + | tig0042468:3145-3164 | Msa1462630:intergenic | 25.0% |
| ! | ATAATACATGTAAATGTCAC+TGG | - | tig0042468:3703-3722 | Msa1462630:intron | 25.0% |
| !!! | TGTTTGTTATACAGCTATTT+TGG | - | tig0042468:3730-3749 | Msa1462630:intron | 25.0% |
| ! | AATCATGTTAACTAGGATAT+TGG | + | tig0042468:3895-3914 | Msa1462630:intergenic | 25.0% |
| ! | ATCTAGTAATCATGTTAACT+AGG | + | tig0042468:3902-3921 | Msa1462630:intergenic | 25.0% |
| ! | CATTAACAAAATCAATATGC+TGG | - | tig0042468:4175-4194 | Msa1462630:CDS | 25.0% |
| !! | ATAAAACAGGGCTTTTTATT+TGG | - | tig0042468:4530-4549 | Msa1462630:CDS | 25.0% |
| !! | AACCAGCAAACTTTTTATTA+TGG | - | tig0042468:5261-5280 | Msa1462630:intron | 25.0% |
| ! | AACCATAATAAAAAGTTTGC+TGG | + | tig0042468:5266-5285 | Msa1462630:intergenic | 25.0% |
| ! | AAATGATATATGACTAGTAG+TGG | + | tig0042468:5610-5629 | Msa1462630:intergenic | 25.0% |
| !! | TGGTGTTTTCTTCTATAATA+TGG | - | tig0042468:5702-5721 | Msa1462630:five_prime_UTR | 25.0% |
| !! | ATTTTATATGCGTAATAGTC+GGG | - | tig0042468:5786-5805 | Msa1462630:intron | 25.0% |
| !!! | ACTTGTACCTTTTTTAGTTT+TGG | - | tig0042468:5910-5929 | Msa1462630:five_prime_UTR | 25.0% |
| ACTAAAAAATAGTTAAGGGC+CGG | + | tig0042468:432-451 | Msa1462630:intergenic | 30.0% | |
| AGTACTACTAATTGTGACTT+TGG | - | tig0042468:525-544 | Msa1462630:three_prime_UTR | 30.0% | |
| ATTCTGATTTAAATAGCCGA+AGG | + | tig0042468:584-603 | Msa1462630:intergenic | 30.0% | |
| AAACAAGATTCGAATAAACG+CGG | + | tig0042468:808-827 | Msa1462630:intergenic | 30.0% | |
| ! | AAATCACTATCTGAAACAGT+TGG | + | tig0042468:1005-1024 | Msa1462630:intergenic | 30.0% |
| GGTATAATTAATCATCTGTG+AGG | - | tig0042468:1228-1247 | Msa1462630:CDS | 30.0% | |
| !! | AATATTCTAGAGTAGATGGT+AGG | - | tig0042468:1277-1296 | Msa1462630:intron | 30.0% |
| AAACTGATAATAGCAATGCT+CGG | - | tig0042468:1472-1491 | Msa1462630:CDS | 30.0% | |
| ! | ATCTTTCTTTTCACTCTCAT+CGG | + | tig0042468:1706-1725 | Msa1462630:intergenic | 30.0% |
| TGAAAAGAAAGATGAATCAG+AGG | - | tig0042468:1713-1732 | Msa1462630:intron | 30.0% | |
| AACAACAGATAGTAATGTAG+AGG | - | tig0042468:1791-1810 | Msa1462630:intron | 30.0% | |
| AAAGTTTGTAATGTTACTGC+TGG | - | tig0042468:2038-2057 | Msa1462630:CDS | 30.0% | |
| ! | TCAATTGTCATTTCATTCTC+TGG | - | tig0042468:2247-2266 | Msa1462630:CDS | 30.0% |
| TCAAAATTGGGTGAAAGTTA+CGG | - | tig0042468:2361-2380 | Msa1462630:intron | 30.0% | |
| !! | CAGATTTTTAAAGGCTATAC+TGG | + | tig0042468:2640-2659 | Msa1462630:intergenic | 30.0% |
| AAAGTCATTGAAGAACTTTC+AGG | + | tig0042468:2967-2986 | Msa1462630:intergenic | 30.0% | |
| CGTATCTTAATTTCCTCTAT+TGG | + | tig0042468:3002-3021 | Msa1462630:intergenic | 30.0% | |
| TAGAGGAAATTAAGATACGT+TGG | - | tig0042468:3003-3022 | Msa1462630:intron | 30.0% | |
| ATGTGCAGTTCATATGTATT+AGG | + | tig0042468:3075-3094 | Msa1462630:intergenic | 30.0% | |
| TTTACAATGTTTACTCGATG+TGG | - | tig0042468:3240-3259 | Msa1462630:intron | 30.0% | |
| GGCATTTATCAATCTTAACT+TGG | - | tig0042468:3653-3672 | Msa1462630:intron | 30.0% | |
| !! | TTGTTATACAGCTATTTTGG+TGG | - | tig0042468:3733-3752 | Msa1462630:intron | 30.0% |
| !!! | TGTTATACAGCTATTTTGGT+GGG | - | tig0042468:3734-3753 | Msa1462630:intron | 30.0% |
| CAAAAACAATTTACAACTGC+AGG | - | tig0042468:3950-3969 | Msa1462630:CDS | 30.0% | |
| TTCCTGAAGATGTTGAAATA+TGG | - | tig0042468:4056-4075 | Msa1462630:CDS | 30.0% | |
| TTCCATATTTCAACATCTTC+AGG | + | tig0042468:4061-4080 | Msa1462630:intergenic | 30.0% | |
| GAAGATGTTGAAATATGGAA+TGG | - | tig0042468:4061-4080 | Msa1462630:CDS | 30.0% | |
| TCATAACAATCATTGGATAG+TGG | + | tig0042468:4261-4280 | Msa1462630:intergenic | 30.0% | |
| GACTAATTCAGCAATTAACT+CGG | + | tig0042468:4398-4417 | Msa1462630:intergenic | 30.0% | |
| ! | AAGTCTTATCTAAACGGATT+GGG | - | tig0042468:4870-4889 | Msa1462630:CDS | 30.0% |
| ATGGATATGAACTCAATCTA+TGG | - | tig0042468:4921-4940 | Msa1462630:CDS | 30.0% | |
| ATATGAACTCAATCTATGGA+GGG | - | tig0042468:4925-4944 | Msa1462630:CDS | 30.0% | |
| ! | TCTTTTCAAAGGTTCAGAAA+AGG | - | tig0042468:5208-5227 | Msa1462630:intron | 30.0% |
| !! | AGTTTGCTGGTTATTAATGT+GGG | + | tig0042468:5253-5272 | Msa1462630:intergenic | 30.0% |
| !! | AAGTTTGCTGGTTATTAATG+TGG | + | tig0042468:5254-5273 | Msa1462630:intergenic | 30.0% |
| !! | TGGTTTTGCTAATGCTTATT+TGG | - | tig0042468:5281-5300 | Msa1462630:intron | 30.0% |
| ! | TTTTGCTAATGCTTATTTGG+TGG | - | tig0042468:5284-5303 | Msa1462630:intron | 30.0% |
| AGTATGCTATTGTTTAAGCA+CGG | - | tig0042468:5527-5546 | Msa1462630:intron | 30.0% | |
| ! | TTGTATTCGTCTTTTACCTT+TGG | - | tig0042468:5642-5661 | Msa1462630:five_prime_UTR | 30.0% |
| !! | TTCTATAATATGGTGCCATA+GGG | - | tig0042468:5712-5731 | Msa1462630:five_prime_UTR | 30.0% |
| GCAACTGAATATATATGGAT+TGG | - | tig0042468:5849-5868 | Msa1462630:five_prime_UTR | 30.0% | |
| !! | CTGAATATATATGGATTGGA+CGG | - | tig0042468:5853-5872 | Msa1462630:five_prime_UTR | 30.0% |
| !! | TGAATATATATGGATTGGAC+GGG | - | tig0042468:5854-5873 | Msa1462630:five_prime_UTR | 30.0% |
| TGCACAACCAAAACTAAAAA+AGG | + | tig0042468:5920-5939 | Msa1462630:intergenic | 30.0% | |
| ACTAACCAAAGAAACACATG+CGG | + | tig0042468:346-365 | Msa1462630:intergenic | 35.0% | |
| AACTAAACTCTCTCTTCCTT+CGG | - | tig0042468:565-584 | Msa1462630:three_prime_UTR | 35.0% | |
| TTTGACAGTGTGTGAATGTT+GGG | + | tig0042468:607-626 | Msa1462630:intergenic | 35.0% | |
| GAGATTCGAAATTGAGAGAA+AGG | + | tig0042468:632-651 | Msa1462630:intergenic | 35.0% | |
| GTGAAGAAGCAAAGAAAGAA+AGG | + | tig0042468:778-797 | Msa1462630:intergenic | 35.0% | |
| !! | GGGAAATATTCTAGAGTAGA+TGG | - | tig0042468:1273-1292 | Msa1462630:intron | 35.0% |
| ! | ATTTTCCTCCGATTTCTCTT+CGG | + | tig0042468:1562-1581 | Msa1462630:intergenic | 35.0% |
| GGTAAGAAAACAGAAGATGA+AGG | - | tig0042468:1624-1643 | Msa1462630:intron | 35.0% | |
| AAATAACAAAGACAGCGAAG+AGG | - | tig0042468:1659-1678 | Msa1462630:intron | 35.0% | |
| AGATAGTAATGTAGAGGAGA+AGG | - | tig0042468:1797-1816 | Msa1462630:intron | 35.0% | |
| AAAGAATCTGATGAAAACGC+TGG | - | tig0042468:1837-1856 | Msa1462630:intron | 35.0% | |
| AATGAAACTACGACACAAAC+TGG | - | tig0042468:1939-1958 | Msa1462630:intron | 35.0% | |
| AGCAGAGTCAAAGAATGAAA+AGG | - | tig0042468:1980-1999 | Msa1462630:CDS | 35.0% | |
| TTCTCGATGTTCATAGTGTT+TGG | + | tig0042468:2120-2139 | Msa1462630:intergenic | 35.0% | |
| !! | TTAACCTTCTCTCTGCTTTT+AGG | + | tig0042468:2215-2234 | Msa1462630:intergenic | 35.0% |
| !! | TGTTATTTCTCCTGCAGATA+TGG | - | tig0042468:2294-2313 | Msa1462630:CDS | 35.0% |
| CATTGTAATACCATATCTGC+AGG | + | tig0042468:2307-2326 | Msa1462630:intergenic | 35.0% | |
| !! | ACTAAGCTTGCTGAAGTTAA+GGG | - | tig0042468:2335-2354 | Msa1462630:intron | 35.0% |
| !! | AAGTTAAGGGGCATCAAAAT+TGG | - | tig0042468:2348-2367 | Msa1462630:intron | 35.0% |
| !! | AGTTAAGGGGCATCAAAATT+GGG | - | tig0042468:2349-2368 | Msa1462630:intron | 35.0% |
| CAAAATTGGGTGAAAGTTAC+GGG | - | tig0042468:2362-2381 | Msa1462630:intron | 35.0% | |
| !! | CAAGAGGTATGCATTTTGTT+TGG | - | tig0042468:2455-2474 | Msa1462630:intron | 35.0% |
| TGTGACAACTTGACAAGTTA+GGG | + | tig0042468:2588-2607 | Msa1462630:intergenic | 35.0% | |
| !! | TTTTAAAGGCTATACTGGTG+CGG | + | tig0042468:2635-2654 | Msa1462630:intergenic | 35.0% |
| ATCTTGTTGATCTAAGCTTG+TGG | - | tig0042468:2715-2734 | Msa1462630:CDS | 35.0% | |
| TCTTGTTGATCTAAGCTTGT+GGG | - | tig0042468:2716-2735 | Msa1462630:CDS | 35.0% | |
| ACAAACAATTTCTTCACTCC+AGG | + | tig0042468:2790-2809 | Msa1462630:intergenic | 35.0% | |
| TAATTTCCTCTATTGGCAGT+TGG | + | tig0042468:2995-3014 | Msa1462630:intergenic | 35.0% | |
| ACTTCTTCTGATAAAGAAGC+TGG | + | tig0042468:3170-3189 | Msa1462630:intergenic | 35.0% | |
| TGCATCATCAAAGCTCTATT+AGG | + | tig0042468:3286-3305 | Msa1462630:intergenic | 35.0% | |
| ACACGTGTTATACTAGATGT+TGG | - | tig0042468:3337-3356 | Msa1462630:intron | 35.0% | |
| GTTATACTAGATGTTGGATG+TGG | - | tig0042468:3343-3362 | Msa1462630:intron | 35.0% | |
| !!! | GTTATACAGCTATTTTGGTG+GGG | - | tig0042468:3735-3754 | Msa1462630:intron | 35.0% |
| TGCTGTGTAATTCAAACACA+TGG | + | tig0042468:3834-3853 | Msa1462630:intergenic | 35.0% | |
| AAACAATTTACAACTGCAGG+TGG | - | tig0042468:3953-3972 | Msa1462630:CDS | 35.0% | |
| TCAGGAAGCTTCTGATAAAT+AGG | + | tig0042468:4043-4062 | Msa1462630:intergenic | 35.0% | |
| ATCAGCAAGGATCAAGTTAA+TGG | - | tig0042468:4210-4229 | Msa1462630:CDS | 35.0% | |
| AAGGATCAAGTTAATGGAGT+TGG | - | tig0042468:4216-4235 | Msa1462630:CDS | 35.0% | |
| TCGTTGCTCATAACAATCAT+TGG | + | tig0042468:4268-4287 | Msa1462630:intergenic | 35.0% | |
| ! | TCATCAGATTTTTGACACAG+TGG | + | tig0042468:4306-4325 | Msa1462630:intergenic | 35.0% |
| ! | GTTTTTGCTCATGTCAGTTA+AGG | + | tig0042468:4353-4372 | Msa1462630:intergenic | 35.0% |
| !! | TTTTTATTTGGCTGGAGACT+TGG | - | tig0042468:4542-4561 | Msa1462630:CDS | 35.0% |
| TGACAACCAATATGGTACAT+TGG | + | tig0042468:4769-4788 | Msa1462630:intergenic | 35.0% | |
| TATCAGCAGCAAAATCTTCA+GGG | + | tig0042468:4824-4843 | Msa1462630:intergenic | 35.0% | |
| TTATCAGCAGCAAAATCTTC+AGG | + | tig0042468:4825-4844 | Msa1462630:intergenic | 35.0% | |
| TTGCTGCTGATAATAAACAC+TGG | - | tig0042468:4832-4851 | Msa1462630:CDS | 35.0% | |
| ! | GTGTCCAAGTCTTATCTAAA+CGG | - | tig0042468:4864-4883 | Msa1462630:CDS | 35.0% |
| CAATCCGTTTAGATAAGACT+TGG | + | tig0042468:4871-4890 | Msa1462630:intergenic | 35.0% | |
| ! | CAAGTCTTATCTAAACGGAT+TGG | - | tig0042468:4869-4888 | Msa1462630:CDS | 35.0% |
| GAATTCAGTGGTCAAATGTA+CGG | - | tig0042468:4892-4911 | Msa1462630:CDS | 35.0% | |
| GATATGAACTCAATCTATGG+AGG | - | tig0042468:4924-4943 | Msa1462630:CDS | 35.0% | |
| ! | CCGTTCATAAATAATGGGAA+GGG | + | tig0042468:5106-5125 | Msa1462630:intergenic | 35.0% |
| CCCTTCCCATTATTTATGAA+CGG | - | tig0042468:5103-5122 | Msa1462630:intron | 35.0% | |
| CCTTCCCATTATTTATGAAC+GGG | - | tig0042468:5104-5123 | Msa1462630:intron | 35.0% | |
| CTTCCCATTATTTATGAACG+GGG | - | tig0042468:5105-5124 | Msa1462630:intron | 35.0% | |
| AGACCCCGTTCATAAATAAT+GGG | + | tig0042468:5111-5130 | Msa1462630:intergenic | 35.0% | |
| AAGACCCCGTTCATAAATAA+TGG | + | tig0042468:5112-5131 | Msa1462630:intergenic | 35.0% | |
| ! | ATTTATGAACGGGGTCTTTT+TGG | - | tig0042468:5114-5133 | Msa1462630:intron | 35.0% |
| TTGAAAAGAGATGATCTGCA+TGG | + | tig0042468:5197-5216 | Msa1462630:intergenic | 35.0% | |
| ! | TGCAGATCATCTCTTTTCAA+AGG | - | tig0042468:5197-5216 | Msa1462630:intron | 35.0% |
| GATGAGATGCCAAAATACTT+GGG | - | tig0042468:5549-5568 | Msa1462630:intron | 35.0% | |
| !! | CTTCTATAATATGGTGCCAT+AGG | - | tig0042468:5711-5730 | Msa1462630:five_prime_UTR | 35.0% |
| TTAAGGAAGAGGAAACCATG+AGG | + | tig0042468:394-413 | Msa1462630:intergenic | 40.0% | |
| AAAAAATAGTTAAGGGCCGG+AGG | + | tig0042468:429-448 | Msa1462630:intergenic | 40.0% | |
| GTTTGACAGTGTGTGAATGT+TGG | + | tig0042468:608-627 | Msa1462630:intergenic | 40.0% | |
| CAGATCTAAGAGGAAGATGA+AGG | + | tig0042468:691-710 | Msa1462630:intergenic | 40.0% | |
| TAGCAAGAAGCAGATCTAAG+AGG | + | tig0042468:701-720 | Msa1462630:intergenic | 40.0% | |
| CGATCTGAGAGATGAAGATT+GGG | + | tig0042468:748-767 | Msa1462630:intergenic | 40.0% | |
| !!! | CGAATCTTGTTTTCTGCGTT+TGG | - | tig0042468:816-835 | Msa1462630:CDS | 40.0% |
| ! | TGCTTCGTAATTTGCGATTC+TGG | - | tig0042468:1128-1147 | Msa1462630:CDS | 40.0% |
| TTTCCCTAAAGCCATGTCTT+CGG | + | tig0042468:1259-1278 | Msa1462630:intergenic | 40.0% | |
| !! | TTTGTTGCTCTAGCCTTGAT+TGG | - | tig0042468:1339-1358 | Msa1462630:CDS | 40.0% |
| !! | TTGTTGCTCTAGCCTTGATT+GGG | - | tig0042468:1340-1359 | Msa1462630:CDS | 40.0% |
| !! | ACCTCATTTTTACTCTCCTG+AGG | + | tig0042468:1417-1436 | Msa1462630:intergenic | 40.0% |
| GGAGAGTAAAAATGAGGTGA+AGG | - | tig0042468:1419-1438 | Msa1462630:CDS | 40.0% | |
| GAAATCGGAGGAAAATTCCA+CGG | - | tig0042468:1566-1585 | Msa1462630:CDS | 40.0% | |
| TAGTAATGTAGAGGAGAAGG+TGG | - | tig0042468:1800-1819 | Msa1462630:intron | 40.0% | |
| ! | CTCATTTGAACTCTGGTCTT+TGG | + | tig0042468:1886-1905 | Msa1462630:intergenic | 40.0% |
| CAAAGACCAGAGTTCAAATG+AGG | - | tig0042468:1884-1903 | Msa1462630:intron | 40.0% | |
| GGAATACCTCATTTGAACTC+TGG | + | tig0042468:1893-1912 | Msa1462630:intergenic | 40.0% | |
| ! | TCAAATGAGGTATTCCCTTC+CGG | - | tig0042468:1897-1916 | Msa1462630:intron | 40.0% |
| ! | AACTGGATCGTTTTCTACTC+AGG | - | tig0042468:1956-1975 | Msa1462630:CDS | 40.0% |
| TTTCCAATTGTACCCAGTCT+TGG | + | tig0042468:2021-2040 | Msa1462630:intergenic | 40.0% | |
| TAATCGCTTTCCAGTTGTCA+AGG | + | tig0042468:2082-2101 | Msa1462630:intergenic | 40.0% | |
| TTGACAACTGGAAAGCGATT+AGG | - | tig0042468:2081-2100 | Msa1462630:CDS | 40.0% | |
| ! | ATAGAGCGCTTATATCCTTC+AGG | + | tig0042468:2185-2204 | Msa1462630:intergenic | 40.0% |
| GATATAAGCGCTCTATTGAG+TGG | - | tig0042468:2189-2208 | Msa1462630:intron | 40.0% | |
| !! | CACTAAGCTTGCTGAAGTTA+AGG | - | tig0042468:2334-2353 | Msa1462630:intron | 40.0% |
| !! | CTAAGCTTGCTGAAGTTAAG+GGG | - | tig0042468:2336-2355 | Msa1462630:intron | 40.0% |
| !! | GGTGAGTATCTTACTTTTCC+TGG | - | tig0042468:2383-2402 | Msa1462630:intron | 40.0% |
| !! | GAGTATCTTACTTTTCCTGG+TGG | - | tig0042468:2386-2405 | Msa1462630:intron | 40.0% |
| !! | TATCTTACTTTTCCTGGTGG+TGG | - | tig0042468:2389-2408 | Msa1462630:intron | 40.0% |
| GTGTGACAACTTGACAAGTT+AGG | + | tig0042468:2589-2608 | Msa1462630:intergenic | 40.0% | |
| TTTGTCCTGTTGTGCGTAAA+CGG | + | tig0042468:3051-3070 | Msa1462630:intergenic | 40.0% | |
| ATATGAACTGCACATCTGTG+AGG | - | tig0042468:3080-3099 | Msa1462630:intron | 40.0% | |
| TGAGCTTCATGTTCATCCTT+TGG | + | tig0042468:3427-3446 | Msa1462630:intergenic | 40.0% | |
| AAAGGATGAACATGAAGCTC+AGG | - | tig0042468:3426-3445 | Msa1462630:intron | 40.0% | |
| ! | AGGTTCAATTTGCTCTTGAG+AGG | - | tig0042468:3446-3465 | Msa1462630:intron | 40.0% |
| ! | GGTTCAATTTGCTCTTGAGA+GGG | - | tig0042468:3447-3466 | Msa1462630:intron | 40.0% |
| ! | GTTCAATTTGCTCTTGAGAG+GGG | - | tig0042468:3448-3467 | Msa1462630:intron | 40.0% |
| ! | TTCAATTTGCTCTTGAGAGG+GGG | - | tig0042468:3449-3468 | Msa1462630:intron | 40.0% |
| TCCTGCTATATCTGCTGTAA+TGG | - | tig0042468:3474-3493 | Msa1462630:intron | 40.0% | |
| CCTGCTATATCTGCTGTAAT+GGG | - | tig0042468:3475-3494 | Msa1462630:intron | 40.0% | |
| TGAATACCTTCAATGTGCCA+TGG | + | tig0042468:3565-3584 | Msa1462630:intergenic | 40.0% | |
| ! | TGCAGGTGGTAAACTTCTTT+TGG | - | tig0042468:3967-3986 | Msa1462630:intron | 40.0% |
| GACCATACAAAAAAACCACC+AGG | + | tig0042468:4013-4032 | Msa1462630:intergenic | 40.0% | |
| ! | GGAACTTGTTTCAATCAGCA+AGG | - | tig0042468:4197-4216 | Msa1462630:CDS | 40.0% |
| ! | GGATAGTGGCTTCTTGTATA+TGG | + | tig0042468:4247-4266 | Msa1462630:intergenic | 40.0% |
| ! | TCAGATTTTTGACACAGTGG+AGG | + | tig0042468:4303-4322 | Msa1462630:intergenic | 40.0% |
| AAGGAATACCATGCTGCATT+GGG | + | tig0042468:4330-4349 | Msa1462630:intergenic | 40.0% | |
| TTGCTCATGTCAGTTAAGGA+AGG | + | tig0042468:4349-4368 | Msa1462630:intergenic | 40.0% | |
| !! | TCACTTTTCCAAGACAGGAA+GGG | + | tig0042468:4482-4501 | Msa1462630:intergenic | 40.0% |
| !! | AACAGGGCTTTTTATTTGGC+TGG | - | tig0042468:4534-4553 | Msa1462630:CDS | 40.0% |
| TCTAATCTCTCTGATGTGAC+AGG | - | tig0042468:4652-4671 | Msa1462630:CDS | 40.0% | |
| TGGGAACTTGACAACCAATA+TGG | + | tig0042468:4777-4796 | Msa1462630:intergenic | 40.0% | |
| CTTACCATAGACTCCAACTT+GGG | + | tig0042468:4796-4815 | Msa1462630:intergenic | 40.0% | |
| ATCAGCAGCAAAATCTTCAG+GGG | + | tig0042468:4823-4842 | Msa1462630:intergenic | 40.0% | |
| !! | TAAACGGATTGGGAATTCAG+TGG | - | tig0042468:4880-4899 | Msa1462630:CDS | 40.0% |
| GTCAAATGTACGGAATGTCA+TGG | - | tig0042468:4902-4921 | Msa1462630:CDS | 40.0% | |
| CAATCGGTAGATGTCAAACA+CGG | + | tig0042468:5005-5024 | Msa1462630:intergenic | 40.0% | |
| ! | TGTTTGACATCTACCGATTG+TGG | - | tig0042468:5005-5024 | Msa1462630:exon | 40.0% |
| TTTCAAAGCTGCAGCAAATC+TGG | + | tig0042468:5034-5053 | Msa1462630:intergenic | 40.0% | |
| !! | AATAATGGGAAGGGTATCTG+CGG | + | tig0042468:5097-5116 | Msa1462630:intergenic | 40.0% |
| ! | CCCGTTCATAAATAATGGGA+AGG | + | tig0042468:5107-5126 | Msa1462630:intergenic | 40.0% |
| AATCATTTAGCACCTATCCC+AGG | - | tig0042468:5157-5176 | Msa1462630:intron | 40.0% | |
| AAAAGAGATGATCTGCATGG+AGG | + | tig0042468:5194-5213 | Msa1462630:intergenic | 40.0% | |
| CTGAAGGAAAGCTTATTGTC+CGG | - | tig0042468:5362-5381 | Msa1462630:intron | 40.0% | |
| TGAAGGAAAGCTTATTGTCC+GGG | - | tig0042468:5363-5382 | Msa1462630:intron | 40.0% | |
| TAACAAACCCTCCTTATCCT+TGG | + | tig0042468:5461-5480 | Msa1462630:intergenic | 40.0% | |
| GGATGAGATGCCAAAATACT+TGG | - | tig0042468:5548-5567 | Msa1462630:intron | 40.0% | |
| ATGCCAAAATACTTGGGTTC+CGG | - | tig0042468:5555-5574 | Msa1462630:five_prime_UTR | 40.0% | |
| ! | ACACAAGAATTTTGAGCAGC+CGG | + | tig0042468:5577-5596 | Msa1462630:intergenic | 40.0% |
| CAAAGAAACACATGCGGCTA+AGG | + | tig0042468:340-359 | Msa0443870:intergenic | 45.0% | |
| CTTAGCCGCATGTGTTTCTT+TGG | - | tig0042468:338-357 | Msa1462630:three_prime_UTR | 45.0% | |
| ! | ATCTGAGCATTGTGTGAACG+CGG | + | tig0042468:664-683 | Msa1462630:intergenic | 45.0% |
| ! | GCTTCTTGCTATAGAACCAG+AGG | - | tig0042468:710-729 | Msa1462630:three_prime_UTR | 45.0% |
| GAGAGATGAAGATTGGGAAC+AGG | + | tig0042468:742-761 | Msa1462630:intergenic | 45.0% | |
| GCGATCTGAGAGATGAAGAT+TGG | + | tig0042468:749-768 | Msa1462630:intergenic | 45.0% | |
| ! | GATCCGAAGACATGGCTTTA+GGG | - | tig0042468:1253-1272 | Msa1462630:intron | 45.0% |
| !! | TGTTGCTCTAGCCTTGATTG+GGG | - | tig0042468:1341-1360 | Msa1462630:CDS | 45.0% |
| CATCATCCAAACCCCAATCA+AGG | + | tig0042468:1355-1374 | Msa1462630:intergenic | 45.0% | |
| TGTAGTTCCCGTGCAAAATG+AGG | - | tig0042468:1386-1405 | Msa1462630:CDS | 45.0% | |
| GCCTCAGGAGAGTAAAAATG+AGG | - | tig0042468:1413-1432 | Msa1462630:CDS | 45.0% | |
| CGGCAGTTTGAAGATAATCC+TGG | - | tig0042468:1492-1511 | Msa1462630:CDS | 45.0% | |
| ! | TAATCCTGGTGATTTGCCTG+AGG | - | tig0042468:1506-1525 | Msa1462630:CDS | 45.0% |
| TGTCAGCTCCGAAGAGAAAT+CGG | - | tig0042468:1551-1570 | Msa1462630:CDS | 45.0% | |
| ATCTTCAGAAGACTTCTCCG+TGG | + | tig0042468:1586-1605 | Msa1462630:intergenic | 45.0% | |
| AGATACGAAGACAGAAGACG+AGG | - | tig0042468:1602-1621 | Msa1462630:intron | 45.0% | |
| GATACGAAGACAGAAGACGA+GGG | - | tig0042468:1603-1622 | Msa1462630:intron | 45.0% | |
| ! | CAAATGAGGTATTCCCTTCC+GGG | - | tig0042468:1898-1917 | Msa1462630:intron | 45.0% |
| ! | AAATGAGGTATTCCCTTCCG+GGG | - | tig0042468:1899-1918 | Msa1462630:intron | 45.0% |
| ATTCAAGAGTCCTCCAAGAC+TGG | - | tig0042468:2005-2024 | Msa1462630:CDS | 45.0% | |
| TTCAAGAGTCCTCCAAGACT+GGG | - | tig0042468:2006-2025 | Msa1462630:CDS | 45.0% | |
| TCAAGGCATGGGATAAAGTC+GGG | + | tig0042468:2065-2084 | Msa1462630:intergenic | 45.0% | |
| GTCAAGGCATGGGATAAAGT+CGG | + | tig0042468:2066-2085 | Msa1462630:intergenic | 45.0% | |
| TTATCCCATGCCTTGACAAC+TGG | - | tig0042468:2069-2088 | Msa1462630:CDS | 45.0% | |
| CTTTCCAGTTGTCAAGGCAT+GGG | + | tig0042468:2076-2095 | Msa1462630:intergenic | 45.0% | |
| GGAAAGCGATTAGGAGTCTT+CGG | - | tig0042468:2090-2109 | Msa1462630:CDS | 45.0% | |
| ATCCTTCAGGAAGAGAGACA+AGG | + | tig0042468:2172-2191 | Msa1462630:intergenic | 45.0% | |
| ACTTCAGCAAGCTTAGTGTG+TGG | + | tig0042468:2332-2351 | Msa1462630:intergenic | 45.0% | |
| GTGGAACCCAATTCAAGCAT+GGG | - | tig0042468:2408-2427 | Msa1462630:intron | 45.0% | |
| TGGAACCCAATTCAAGCATG+GGG | - | tig0042468:2409-2428 | Msa1462630:intron | 45.0% | |
| AAGTGCCCCATGCTTGAATT+GGG | + | tig0042468:2417-2436 | Msa1462630:intergenic | 45.0% | |
| TACCAGTTCGGTCTAAACTG+TGG | + | tig0042468:2852-2871 | Msa1462630:intergenic | 45.0% | |
| ACAGTTTAGACCGAACTGGT+AGG | - | tig0042468:2851-2870 | Msa1462630:CDS | 45.0% | |
| TTAGACCGAACTGGTAGGAA+TGG | - | tig0042468:2856-2875 | Msa1462630:CDS | 45.0% | |
| ! | ATGTGCCATTCCTACCAGTT+CGG | + | tig0042468:2864-2883 | Msa1462630:intergenic | 45.0% |
| TCTGTACCAACTGCCAATAG+AGG | - | tig0042468:2986-3005 | Msa1462630:intron | 45.0% | |
| TTGTCCTGTTGTGCGTAAAC+GGG | + | tig0042468:3050-3069 | Msa1462630:intergenic | 45.0% | |
| ! | TGCAATGTCACTTGCACCAA+AGG | - | tig0042468:3408-3427 | Msa1462630:intron | 45.0% |
| CCCATTACAGCAGATATAGC+AGG | + | tig0042468:3478-3497 | Msa1462630:intergenic | 45.0% | |
| TCAAATACTCTCCCAGGGAA+GGG | + | tig0042468:3514-3533 | Msa1462630:intergenic | 45.0% | |
| ATCAAATACTCTCCCAGGGA+AGG | + | tig0042468:3515-3534 | Msa1462630:intergenic | 45.0% | |
| CTGCATCAAATACTCTCCCA+GGG | + | tig0042468:3519-3538 | Msa1462630:intergenic | 45.0% | |
| ACTGCATCAAATACTCTCCC+AGG | + | tig0042468:3520-3539 | Msa1462630:intergenic | 45.0% | |
| GAACTCTACAACGTGCACAA+TGG | + | tig0042468:3543-3562 | Msa1462630:intergenic | 45.0% | |
| AGAGTTCCATGGCACATTGA+AGG | - | tig0042468:3556-3575 | Msa1462630:intron | 45.0% | |
| !!! | ATACAGCTATTTTGGTGGGG+TGG | - | tig0042468:3738-3757 | Msa1462630:intron | 45.0% |
| !!! | TACAGCTATTTTGGTGGGGT+GGG | - | tig0042468:3739-3758 | Msa1462630:intron | 45.0% |
| !! | TGGAGCTGAACAGAGTATTG+CGG | - | tig0042468:3987-4006 | Msa1462630:intron | 45.0% |
| !!! | GGCCTGGTGGTTTTTTTGTA+TGG | - | tig0042468:4008-4027 | Msa1462630:intron | 45.0% |
| GAAGGAATACCATGCTGCAT+TGG | + | tig0042468:4331-4350 | Msa1462630:intergenic | 45.0% | |
| ! | ACTTTTCCAAGACAGGAAGG+GGG | + | tig0042468:4480-4499 | Msa1462630:intergenic | 45.0% |
| ! | CACTTTTCCAAGACAGGAAG+GGG | + | tig0042468:4481-4500 | Msa1462630:intergenic | 45.0% |
| !! | CTCACTTTTCCAAGACAGGA+AGG | + | tig0042468:4483-4502 | Msa1462630:intergenic | 45.0% |
| CTTCCTGTCTTGGAAAAGTG+AGG | - | tig0042468:4481-4500 | Msa1462630:CDS | 45.0% | |
| !! | GTTCCTCACTTTTCCAAGAC+AGG | + | tig0042468:4487-4506 | Msa1462630:intergenic | 45.0% |
| CCAGTTAGTTCAAGTGAACG+CGG | - | tig0042468:4708-4727 | Msa1462630:CDS | 45.0% | |
| CAGTTAGTTCAAGTGAACGC+GGG | - | tig0042468:4709-4728 | Msa1462630:CDS | 45.0% | |
| ATATGGTACATTGGTCAGCC+TGG | + | tig0042468:4760-4779 | Msa1462630:intergenic | 45.0% | |
| GGCTGACCAATGTACCATAT+TGG | - | tig0042468:4760-4779 | Msa1462630:CDS | 45.0% | |
| TGGTTGTCAAGTTCCCAAGT+TGG | - | tig0042468:4780-4799 | Msa1462630:CDS | 45.0% | |
| ! | AGTTCCCAAGTTGGAGTCTA+TGG | - | tig0042468:4789-4808 | Msa1462630:CDS | 45.0% |
| GCTTACCATAGACTCCAACT+TGG | + | tig0042468:4797-4816 | Msa1462630:intergenic | 45.0% | |
| AGTTGGAGTCTATGGTAAGC+CGG | - | tig0042468:4797-4816 | Msa1462630:CDS | 45.0% | |
| GCAAATCTGGAAGCCACAAT+CGG | + | tig0042468:5021-5040 | Msa1462630:intergenic | 45.0% | |
| CGGACAATAAGCTTTCCTTC+AGG | + | tig0042468:5364-5383 | Msa1462630:intergenic | 45.0% | |
| CATGGTAAAGTCCATGCAGT+GGG | - | tig0042468:5417-5436 | Msa1462630:intron | 45.0% | |
| CATGACCTACTCCAAGGATA+AGG | - | tig0042468:5447-5466 | Msa1462630:intron | 45.0% | |
| ACCTACTCCAAGGATAAGGA+GGG | - | tig0042468:5451-5470 | Msa1462630:intron | 45.0% | |
| TTGAGTGTCTCTGTCTCCTT+AGG | + | tig0042468:5508-5527 | Msa1462630:intergenic | 45.0% | |
| !! | TAATATGGTGCCATAGGGTG+AGG | - | tig0042468:5717-5736 | Msa1462630:five_prime_UTR | 45.0% |
| !! | AATATGGTGCCATAGGGTGA+GGG | - | tig0042468:5718-5737 | Msa1462630:five_prime_UTR | 45.0% |
| ATCAGATTTCCCTCACCCTA+TGG | + | tig0042468:5730-5749 | Msa1462630:intergenic | 45.0% | |
| !! | ATATAAAATAAATAAATCAA+TGG | + | tig0042468:5775-5794 | Msa1462630:intergenic | 5.0% |
| AATGTCTCCCTCAGTCCTCA+TGG | - | tig0042468:376-395 | Msa1462630:three_prime_UTR | 50.0% | |
| GAGGAAACCATGAGGACTGA+GGG | + | tig0042468:386-405 | Msa1462630:intergenic | 50.0% | |
| AGAGGAAACCATGAGGACTG+AGG | + | tig0042468:387-406 | Msa1462630:intergenic | 50.0% | |
| GAGGGAGTGACTTAAGGAAG+AGG | + | tig0042468:405-424 | Msa1462630:intergenic | 50.0% | |
| TTAAGTCACTCCCTCTCCTC+CGG | - | tig0042468:410-429 | Msa1462630:three_prime_UTR | 50.0% | |
| CGATCCGAAGACATGGCTTT+AGG | - | tig0042468:1252-1271 | Msa1462630:intron | 50.0% | |
| !! | CTCTAGCCTTGATTGGGGTT+TGG | - | tig0042468:1346-1365 | Msa1462630:CDS | 50.0% |
| ! | AGGCACGTCCTCATTTTGCA+CGG | + | tig0042468:1397-1416 | Msa1462630:intergenic | 50.0% |
| TGAGGTGAAGGAACAGACTG+AGG | - | tig0042468:1431-1450 | Msa1462630:CDS | 50.0% | |
| TGAAGGAACAGACTGAGGTG+AGG | - | tig0042468:1436-1455 | Msa1462630:CDS | 50.0% | |
| GAAGGAACAGACTGAGGTGA+GGG | - | tig0042468:1437-1456 | Msa1462630:CDS | 50.0% | |
| CCAATTGTACCCAGTCTTGG+AGG | + | tig0042468:2018-2037 | Msa1462630:intergenic | 50.0% | |
| CCTCCAAGACTGGGTACAAT+TGG | - | tig0042468:2015-2034 | Msa1462630:CDS | 50.0% | |
| CAAGGCATGGGATAAAGTCG+GGG | + | tig0042468:2064-2083 | Msa1462630:intergenic | 50.0% | |
| GCTTTCCAGTTGTCAAGGCA+TGG | + | tig0042468:2077-2096 | Msa1462630:intergenic | 50.0% | |
| TTCAGGAAGAGAGACAAGGC+AGG | + | tig0042468:2168-2187 | Msa1462630:intergenic | 50.0% | |
| TGCCTTGTCTCTCTTCCTGA+AGG | - | tig0042468:2167-2186 | Msa1462630:intron | 50.0% | |
| GTGGCCTAAAAGCAGAGAGA+AGG | - | tig0042468:2208-2227 | Msa1462630:CDS | 50.0% | |
| TTGAATTGGGTTCCACCACC+AGG | + | tig0042468:2404-2423 | Msa1462630:intergenic | 50.0% | |
| GGTGGAACCCAATTCAAGCA+TGG | - | tig0042468:2407-2426 | Msa1462630:intron | 50.0% | |
| ! | GAAGTGCCCCATGCTTGAAT+TGG | + | tig0042468:2418-2437 | Msa1462630:intergenic | 50.0% |
| TGCCACAGTTTAGACCGAAC+TGG | - | tig0042468:2847-2866 | Msa1462630:CDS | 50.0% | |
| TGTCCTGTTGTGCGTAAACG+GGG | + | tig0042468:3049-3068 | Msa1462630:intergenic | 50.0% | |
| AGACTCTGCCTGACATTGCT+TGG | - | tig0042468:3305-3324 | Msa1462630:intron | 50.0% | |
| GACTCTGCCTGACATTGCTT+GGG | - | tig0042468:3306-3325 | Msa1462630:intron | 50.0% | |
| ACTCTGCCTGACATTGCTTG+GGG | - | tig0042468:3307-3326 | Msa1462630:intron | 50.0% | |
| AAAGAGAAAGCCTCCGAAGC+TGG | + | tig0042468:3374-3393 | Msa1462630:intergenic | 50.0% | |
| !! | CTGCTGTAATGGGCACAAAG+AGG | - | tig0042468:3485-3504 | Msa1462630:intron | 50.0% |
| GTGCACGTTGTAGAGTTCCA+TGG | - | tig0042468:3545-3564 | Msa1462630:intron | 50.0% | |
| ! | TTTTGGTGGGGTGGGTATGT+TGG | - | tig0042468:3747-3766 | Msa1462630:intron | 50.0% |
| CTGATGATCCCAATGCAGCA+TGG | - | tig0042468:4319-4338 | Msa1462630:CDS | 50.0% | |
| TTCTTACCCCCTTCCTGTCT+TGG | - | tig0042468:4471-4490 | Msa1462630:CDS | 50.0% | |
| CCGCGTTCACTTGAACTAAC+TGG | + | tig0042468:4711-4730 | Msa1462630:intergenic | 50.0% | |
| CGGTAGATGTCAAACACGGA+AGG | + | tig0042468:5001-5020 | Msa1462630:intergenic | 50.0% | |
| GAGATCATACGTCCTGGGAT+AGG | + | tig0042468:5172-5191 | Msa1462630:intergenic | 50.0% | |
| TGGAGGAGATCATACGTCCT+GGG | + | tig0042468:5177-5196 | Msa1462630:intergenic | 50.0% | |
| ATGGAGGAGATCATACGTCC+TGG | + | tig0042468:5178-5197 | Msa1462630:intergenic | 50.0% | |
| ! | CTGAGGTTGATCGGATTCTC+AGG | - | tig0042468:5338-5357 | Msa1462630:intron | 50.0% |
| TATTGTCCGGGACACTGTTG+AGG | - | tig0042468:5375-5394 | Msa1462630:intron | 50.0% | |
| CAATGACCTCAACAGTGTCC+CGG | + | tig0042468:5384-5403 | Msa1462630:intergenic | 50.0% | |
| CATTGACGAGCTTGAGAGCA+TGG | - | tig0042468:5399-5418 | Msa1462630:intron | 50.0% | |
| GCATGGTAAAGTCCATGCAG+TGG | - | tig0042468:5416-5435 | Msa1462630:intron | 50.0% | |
| GACCTACTCCAAGGATAAGG+AGG | - | tig0042468:5450-5469 | Msa1462630:intron | 50.0% | |
| ACCCTCCTTATCCTTGGAGT+AGG | + | tig0042468:5455-5474 | Msa1462630:intergenic | 50.0% | |
| TATGTGTCCAGAAGTCCACC+TGG | - | tig0042468:5479-5498 | Msa1462630:intron | 50.0% | |
| ! | CAGCCGGAACCCAAGTATTT+TGG | + | tig0042468:5561-5580 | Msa1462630:intergenic | 50.0% |
| GGAGGAGAGGGAGTGACTTA+AGG | + | tig0042468:411-430 | Msa1462630:intergenic | 55.0% | |
| TAGTTAAGGGCCGGAGGAGA+GGG | + | tig0042468:423-442 | Msa1462630:intergenic | 55.0% | |
| ATAGTTAAGGGCCGGAGGAG+AGG | + | tig0042468:424-443 | Msa1462630:intergenic | 55.0% | |
| TGGGAACAGGAACGTACCTC+TGG | + | tig0042468:729-748 | Msa1462630:intergenic | 55.0% | |
| GTGAGGTCGATCCGAAGACA+TGG | - | tig0042468:1245-1264 | Msa1462630:intron | 55.0% | |
| ! | GGCACGTCCTCATTTTGCAC+GGG | + | tig0042468:1396-1415 | Msa1462630:intergenic | 55.0% |
| GCAAAATGAGGACGTGCCTC+AGG | - | tig0042468:1398-1417 | Msa1462630:CDS | 55.0% | |
| GCATCCTCAGGCAAATCACC+AGG | + | tig0042468:1513-1532 | Msa1462630:intergenic | 55.0% | |
| TTTGCCTGAGGATGCGACCA+AGG | - | tig0042468:1518-1537 | Msa1462630:CDS | 55.0% | |
| TTGCCTGAGGATGCGACCAA+GGG | - | tig0042468:1519-1538 | Msa1462630:CDS | 55.0% | |
| GCTGACATTGCTATCCCCCT+TGG | + | tig0042468:1538-1557 | Msa1462630:intergenic | 55.0% | |
| CAGCTCCGAAGAGAAATCGG+AGG | - | tig0042468:1554-1573 | Msa1462630:CDS | 55.0% | |
| !! | CAGCGAAGAGGCGTCTACTA+AGG | - | tig0042468:1671-1690 | Msa1462630:intron | 55.0% |
| TAGAAGCTCAGACTGAGCCC+CGG | + | tig0042468:1919-1938 | Msa1462630:intergenic | 55.0% | |
| GGAAGAGAGACAAGGCAGGT+GGG | + | tig0042468:2164-2183 | Msa1462630:intergenic | 55.0% | |
| AGGAAGAGAGACAAGGCAGG+TGG | + | tig0042468:2165-2184 | Msa1462630:intergenic | 55.0% | |
| GCTTGTGGGAAGCAGCTCAT+AGG | - | tig0042468:2730-2749 | Msa1462630:CDS | 55.0% | |
| TTGTGCGTAAACGGGGAGGA+GGG | + | tig0042468:3042-3061 | Msa1462630:intergenic | 55.0% | |
| ACTGCACATCTGTGAGGCAC+TGG | - | tig0042468:3086-3105 | Msa1462630:intron | 55.0% | |
| CGTTTGCCCCAAGCAATGTC+AGG | + | tig0042468:3316-3335 | Msa1462630:intergenic | 55.0% | |
| GGATGTGGAGTTGCCAGCTT+CGG | - | tig0042468:3358-3377 | Msa1462630:intron | 55.0% | |
| ACAAAGAGGCTTCCCTTCCC+TGG | - | tig0042468:3499-3518 | Msa1462630:intron | 55.0% | |
| CAAAGAGGCTTCCCTTCCCT+GGG | - | tig0042468:3500-3519 | Msa1462630:intron | 55.0% | |
| !! | CTGAACAGAGTATTGCGGCC+TGG | - | tig0042468:3992-4011 | Msa1462630:intron | 55.0% |
| !! | AACAGAGTATTGCGGCCTGG+TGG | - | tig0042468:3995-4014 | Msa1462630:intron | 55.0% |
| GGTCACAGTGGCCAGAAAAG+TGG | - | tig0042468:4730-4749 | Msa1462630:CDS | 55.0% | |
| GCAGCAAAATCTTCAGGGGC+CGG | + | tig0042468:4819-4838 | Msa1462630:intergenic | 55.0% | |
| GATCGGATTCTCAGGCCTGA+AGG | - | tig0042468:5346-5365 | Msa1462630:intron | 55.0% | |
| GGTAAAGTCCATGCAGTGGG+AGG | - | tig0042468:5420-5439 | Msa1462630:intron | 55.0% | |
| GGTTCGCATGACCTACTCCA+AGG | - | tig0042468:5441-5460 | Msa1462630:intron | 55.0% | |
| TGCCTGAGGATGCGACCAAG+GGG | - | tig0042468:1520-1539 | Msa1462630:CDS | 60.0% | |
| AGGCAGGTGGGAGGTTCTTC+AGG | + | tig0042468:2152-2171 | Msa1462630:intergenic | 60.0% | |
| AGAGAGACAAGGCAGGTGGG+AGG | + | tig0042468:2161-2180 | Msa1462630:intergenic | 60.0% | |
| TGTGCGTAAACGGGGAGGAG+GGG | + | tig0042468:3041-3060 | Msa1462630:intergenic | 60.0% | |
| GTTGTGCGTAAACGGGGAGG+AGG | + | tig0042468:3043-3062 | Msa1462630:intergenic | 60.0% | |
| CCTGTTGTGCGTAAACGGGG+AGG | + | tig0042468:3046-3065 | Msa1462630:intergenic | 60.0% | |
| CCTCCCCGTTTACGCACAAC+AGG | - | tig0042468:3043-3062 | Msa1462630:intron | 60.0% | |
| TGTGGAGTTGCCAGCTTCGG+AGG | - | tig0042468:3361-3380 | Msa1462630:intron | 60.0% | |
| CAAGTGAACGCGGGTCACAG+TGG | - | tig0042468:4718-4737 | Msa1462630:CDS | 60.0% | |
| !!! | AGCCTGGCTGGCCACTTTTC+TGG | + | tig0042468:4744-4763 | Msa1462630:intergenic | 60.0% |
| GGTACATTGGTCAGCCTGGC+TGG | + | tig0042468:4756-4775 | Msa1462630:intergenic | 60.0% | |
| CATGCGAACCTCCCACTGCA+TGG | + | tig0042468:5431-5450 | Msa1462630:intergenic | 60.0% | |
| GTGTCCAGAAGTCCACCTGG+CGG | - | tig0042468:5482-5501 | Msa1462630:intron | 60.0% | |
| GCCTGAGGATGCGACCAAGG+GGG | - | tig0042468:1521-1540 | Msa1462630:CDS | 65.0% | |
| TCCCCCTTGGTCGCATCCTC+AGG | + | tig0042468:1525-1544 | Msa1462630:intergenic | 65.0% | |
| GCTCAGACTGAGCCCCGGAA+GGG | + | tig0042468:1914-1933 | Msa1462630:intergenic | 65.0% | |
| AGCTCAGACTGAGCCCCGGA+AGG | + | tig0042468:1915-1934 | Msa1462630:intergenic | 65.0% | |
| TGCGTAAACGGGGAGGAGGG+GGG | + | tig0042468:3039-3058 | Msa1462630:intergenic | 65.0% | |
| GTGCGTAAACGGGGAGGAGG+GGG | + | tig0042468:3040-3059 | Msa1462630:intergenic | 65.0% | |
| GGCCAGAAAAGTGGCCAGCC+AGG | - | tig0042468:4739-4758 | Msa1462630:CDS | 65.0% | |
| ! | TAGGCCGCCAGGTGGACTTC+TGG | + | tig0042468:5489-5508 | Msa1462630:intergenic | 65.0% |
| GAAGTCCACCTGGCGGCCTA+AGG | - | tig0042468:5489-5508 | Msa1462630:intron | 65.0% | |
| TGTCTCCTTAGGCCGCCAGG+TGG | + | tig0042468:5497-5516 | Msa1462630:intergenic | 65.0% | |
| CTCTGTCTCCTTAGGCCGCC+AGG | + | tig0042468:5500-5519 | Msa1462630:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0042468 | gene | 331 | 5954 | 331 | ID=Msa1462630;Name=Msa1462630 |
| tig0042468 | mRNA | 331 | 5954 | 331 | ID=Msa1462630-mRNA-1;Parent=Msa1462630;Name=Msa1462630-mRNA-1;_AED=0.06;_eAED=0.06;_QI=422|1|1|1|0.77|0.7|10|411|789 |
| tig0042468 | exon | 331 | 970 | 331 | ID=Msa1462630-mRNA-1:exon:23752;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 1056 | 1250 | 1056 | ID=Msa1462630-mRNA-1:exon:23751;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 1339 | 1611 | 1339 | ID=Msa1462630-mRNA-1:exon:23750;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 1945 | 2119 | 1945 | ID=Msa1462630-mRNA-1:exon:23749;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 2203 | 2313 | 2203 | ID=Msa1462630-mRNA-1:exon:23748;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 2708 | 2978 | 2708 | ID=Msa1462630-mRNA-1:exon:23747;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 3825 | 3974 | 3825 | ID=Msa1462630-mRNA-1:exon:23746;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 4056 | 5067 | 4056 | ID=Msa1462630-mRNA-1:exon:23745;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 5554 | 5765 | 5554 | ID=Msa1462630-mRNA-1:exon:23744;Parent=Msa1462630-mRNA-1 |
| tig0042468 | exon | 5791 | 5954 | 5791 | ID=Msa1462630-mRNA-1:exon:23743;Parent=Msa1462630-mRNA-1 |
| tig0042468 | five_prime_UTR | 5791 | 5954 | 5791 | ID=Msa1462630-mRNA-1:five_prime_utr;Parent=Msa1462630-mRNA-1 |
| tig0042468 | five_prime_UTR | 5554 | 5765 | 5554 | ID=Msa1462630-mRNA-1:five_prime_utr;Parent=Msa1462630-mRNA-1 |
| tig0042468 | five_prime_UTR | 5022 | 5067 | 5022 | ID=Msa1462630-mRNA-1:five_prime_utr;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 4056 | 5021 | 4056 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 3825 | 3974 | 3825 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 2708 | 2978 | 2708 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 2203 | 2313 | 2203 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 1945 | 2119 | 1945 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 1339 | 1611 | 1339 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 1056 | 1250 | 1056 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | CDS | 742 | 970 | 742 | ID=Msa1462630-mRNA-1:cds;Parent=Msa1462630-mRNA-1 |
| tig0042468 | three_prime_UTR | 331 | 741 | 331 | ID=Msa1462630-mRNA-1:three_prime_utr;Parent=Msa1462630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
