Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379190 | GAU23671.1 | 62.150 | 214 | 76 | 3 | 4 | 212 | 241 | 454 | 4.07e-79 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379190 | sp|Q56X46|MSL2_ARATH | 57.944 | 214 | 85 | 3 | 4 | 212 | 239 | 452 | 4.80e-76 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379190 | A0A2Z6LVY4 | 62.150 | 214 | 76 | 3 | 4 | 212 | 241 | 454 | 1.95e-79 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0379190 | Msa0379310 | 0.998551 | 1.700273e-268 | -8.615850e-47 |
| Msa0379190 | Msa0518930 | 0.815488 | 9.009713e-52 | -8.615850e-47 |
| Msa0379190 | Msa0518980 | 0.813994 | 1.930493e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379190 | MtrunA17_Chr3g0132931 | 61.215 | 214 | 78 | 3 | 4 | 212 | 248 | 461 | 2.97e-81 | 256 |
| Msa0379190 | MtrunA17_Chr5g0412241 | 55.607 | 214 | 90 | 3 | 4 | 212 | 236 | 449 | 1.28e-75 | 241 |
| Msa0379190 | MtrunA17_Chr3g0132961 | 55.607 | 214 | 90 | 3 | 4 | 212 | 251 | 464 | 9.34e-74 | 234 |
| Msa0379190 | MtrunA17_Chr3g0132941 | 30.380 | 237 | 110 | 9 | 3 | 212 | 51 | 259 | 2.17e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379190 | AT5G10490.2 | 57.944 | 214 | 85 | 3 | 4 | 212 | 211 | 424 | 2.34e-77 | 245 |
| Msa0379190 | AT5G10490.3 | 57.944 | 214 | 85 | 3 | 4 | 212 | 237 | 450 | 4.50e-77 | 244 |
| Msa0379190 | AT5G10490.1 | 57.944 | 214 | 85 | 3 | 4 | 212 | 239 | 452 | 4.88e-77 | 244 |
| Msa0379190 | AT1G58200.2 | 52.336 | 214 | 97 | 3 | 4 | 212 | 241 | 454 | 7.11e-72 | 231 |
| Msa0379190 | AT1G58200.1 | 52.336 | 214 | 97 | 3 | 4 | 212 | 241 | 454 | 7.11e-72 | 231 |
Find 63 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGGATATGAAGTTTC+TGG | 0.152550 | 3_1:-80146697 | Msa0379190:CDS |
| ATCCAATCATTCAACATAAA+TGG | 0.209184 | 3_1:+80146730 | None:intergenic |
| TGATTATCAGCCATTTAAAT+TGG | 0.236867 | 3_1:-80143807 | Msa0379190:three_prime_UTR |
| GTTCACTGCTCCAATTTAAA+TGG | 0.260482 | 3_1:+80143797 | None:intergenic |
| GATTAATTTATGAAAAGATT+TGG | 0.285849 | 3_1:-80151397 | Msa0379190:five_prime_UTR |
| AGATATCATTTATAGGGTTT+TGG | 0.289713 | 3_1:-80151311 | Msa0379190:five_prime_UTR |
| GCGATTAGATATCATTTATA+GGG | 0.298881 | 3_1:-80151317 | Msa0379190:five_prime_UTR |
| AGCTGGTATGCGCGAGGTTT+TGG | 0.299009 | 3_1:-80146219 | Msa0379190:CDS |
| TACCATTTATGTTGAATGAT+TGG | 0.320995 | 3_1:-80146732 | Msa0379190:CDS |
| GTTGCACGAACTGGCCCTTT+TGG | 0.326824 | 3_1:-80146168 | Msa0379190:CDS |
| AGCGATTAGATATCATTTAT+AGG | 0.350520 | 3_1:-80151318 | Msa0379190:five_prime_UTR |
| GCTGATTGGGAGTGGCTAAC+CGG | 0.377557 | 3_1:+80143853 | None:intergenic |
| AATGGCTGATAATCACCTAT+TGG | 0.400439 | 3_1:+80143815 | None:intergenic |
| CGGGATTGCTGTCCTCCAAA+AGG | 0.402231 | 3_1:+80146153 | None:intergenic |
| GCAGTATAAGTTGCACGAAC+TGG | 0.409088 | 3_1:-80146177 | Msa0379190:CDS |
| GGAAATTTGACTTGGCTGAT+TGG | 0.409855 | 3_1:+80143839 | None:intergenic |
| GAAATTTGACTTGGCTGATT+GGG | 0.416073 | 3_1:+80143840 | None:intergenic |
| TTGCCGGTGAACTTGTGATT+AGG | 0.417014 | 3_1:+80146433 | None:intergenic |
| TTACATTGCTATCAGTCCCT+TGG | 0.440977 | 3_1:-80146374 | Msa0379190:CDS |
| CTGTGGTATTTCACATGAAC+TGG | 0.444183 | 3_1:-80150944 | Msa0379190:CDS |
| CGGATTCCTCACAACATTGC+CGG | 0.448860 | 3_1:+80146417 | None:intergenic |
| CAAGTCAAATTTCCACCAAT+AGG | 0.455503 | 3_1:-80143830 | Msa0379190:CDS |
| GGTATGTAAGAAGATATCTA+TGG | 0.458058 | 3_1:-80146788 | Msa0379190:CDS |
| ACCATCTTCACCTGTGATAG+TGG | 0.459519 | 3_1:+80146471 | None:intergenic |
| TGGATTAAAACAAATATTGA+AGG | 0.472982 | 3_1:-80146712 | Msa0379190:CDS |
| CATAGATCATTATACTTGAA+AGG | 0.485878 | 3_1:+80146761 | None:intergenic |
| CTATTGGTGGAAATTTGACT+TGG | 0.486666 | 3_1:+80143831 | None:intergenic |
| GCCTGCTCTTGTTGTTCTTG+AGG | 0.487218 | 3_1:-80150883 | Msa0379190:intron |
| TTCTCCAGCATGTGGGTTGG+TGG | 0.495902 | 3_1:-80146498 | Msa0379190:intron |
| CTGATTGGGAGTGGCTAACC+GGG | 0.497919 | 3_1:+80143854 | None:intergenic |
| TTCATTCAGAGTATTGTAGC+TGG | 0.502944 | 3_1:-80146236 | Msa0379190:intron |
| GGCTGATAATCACCTATTGG+TGG | 0.521784 | 3_1:+80143818 | None:intergenic |
| GGGATTGCTGTCCTCCAAAA+GGG | 0.523816 | 3_1:+80146154 | None:intergenic |
| TTGTGAGGAATCCGTCTCAT+TGG | 0.524908 | 3_1:-80146408 | Msa0379190:CDS |
| TTCTGTATTTGTCACTGCTG+TGG | 0.532878 | 3_1:-80150961 | Msa0379190:CDS |
| GCTTAGACTGTTCGACTCGC+AGG | 0.535534 | 3_1:-80151259 | Msa0379190:intron |
| TTGACTTGGCTGATTGGGAG+TGG | 0.537340 | 3_1:+80143845 | None:intergenic |
| TTCGACGCTGTTAAAACGAA+AGG | 0.539678 | 3_1:-80151288 | Msa0379190:five_prime_UTR |
| ACCACTATCACAGGTGAAGA+TGG | 0.540890 | 3_1:-80146472 | Msa0379190:CDS |
| GGCGAGGTTACTCCATGCGC+TGG | 0.546892 | 3_1:-80150923 | Msa0379190:CDS |
| TGAGGAGTACCTCAGTGTAA+AGG | 0.550190 | 3_1:-80144633 | Msa0379190:intron |
| AAATTGACTGACAGATGGAT+AGG | 0.552124 | 3_1:-80150998 | Msa0379190:intron |
| ATTCCTAATCACAAGTTCAC+CGG | 0.554353 | 3_1:-80146436 | Msa0379190:CDS |
| GTGTTTGGTTTCAATTCTAG+AGG | 0.554473 | 3_1:-80143686 | Msa0379190:three_prime_UTR |
| ACCTCAAGAACAACAAGAGC+AGG | 0.555189 | 3_1:+80150882 | Msa0379200:intron |
| AGAGCATAAAACAAAATCAC+GGG | 0.576450 | 3_1:+80143771 | None:intergenic |
| CTCTGATAGGGGAAGGACAA+GGG | 0.588846 | 3_1:-80143752 | Msa0379190:three_prime_UTR |
| TGACTGACAGATGGATAGGA+AGG | 0.593228 | 3_1:-80150994 | Msa0379190:intron |
| AACTTATACTGCTCCACATG+AGG | 0.603642 | 3_1:+80146188 | None:intergenic |
| CAGAGCATAAAACAAAATCA+CGG | 0.609310 | 3_1:+80143770 | None:intergenic |
| TGAAGTTTCTGGCAAAGTCG+AGG | 0.609380 | 3_1:-80146686 | Msa0379190:intron |
| TTGTCAGTAATCATCAAGCC+CGG | 0.613234 | 3_1:-80143872 | Msa0379190:CDS |
| TGGTGGTTGACCACTATCAC+AGG | 0.613392 | 3_1:-80146481 | Msa0379190:CDS |
| AACACTGCAGCTAAAACGAA+AGG | 0.622852 | 3_1:-80151344 | Msa0379190:five_prime_UTR |
| CTCTTGATACGCCAATGAGA+CGG | 0.624002 | 3_1:+80146397 | None:intergenic |
| ACTATCACAGGTGAAGATGG+TGG | 0.624871 | 3_1:-80146469 | Msa0379190:CDS |
| GCTCTGATAGGGGAAGGACA+AGG | 0.628561 | 3_1:-80143753 | Msa0379190:three_prime_UTR |
| GTATTTCACATGAACTGGCG+AGG | 0.635437 | 3_1:-80150939 | Msa0379190:CDS |
| CTATCACAGGTGAAGATGGT+GGG | 0.637016 | 3_1:-80146468 | Msa0379190:CDS |
| AGTTCACCGGCAATGTTGTG+AGG | 0.651060 | 3_1:-80146423 | Msa0379190:CDS |
| TATTGTAGCTGGTATGCGCG+AGG | 0.657038 | 3_1:-80146225 | Msa0379190:CDS |
| TGCACATATACACCAGCGCA+TGG | 0.659296 | 3_1:+80150911 | Msa0379200:intron |
| ATTAATTTACCTTTACACTG+AGG | 0.690812 | 3_1:+80144624 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTTAATAAAATGATAT+AGG | - | chr3_1:80144250-80144269 | Msa0379190:intron | 10.0% |
| !!! | ATTAAGAAAAAAATAGATTT+TGG | + | chr3_1:80144435-80144454 | None:intergenic | 10.0% |
| !! | AAAAAAAAGTAAAAATTGTT+TGG | - | chr3_1:80144860-80144879 | Msa0379190:intron | 10.0% |
| !! | AAAAAAAAATAAAAAATGGA+AGG | + | chr3_1:80147928-80147947 | None:intergenic | 10.0% |
| !! | ATGCAAAAAAAAATAAAAAA+TGG | + | chr3_1:80147932-80147951 | None:intergenic | 10.0% |
| !!! | AAAAAAGTTCTTTTTTTATT+AGG | - | chr3_1:80147956-80147975 | Msa0379190:intron | 10.0% |
| !!! | TATATATAAAAGTTACTTTA+AGG | + | chr3_1:80148346-80148365 | Msa0379200:CDS | 10.0% |
| !! | TGATCATAATTATAATTATT+TGG | - | chr3_1:80150692-80150711 | Msa0379190:intron | 10.0% |
| !!! | TTTTCTGATAAATATAATTA+AGG | - | chr3_1:80151049-80151068 | Msa0379190:intron | 10.0% |
| !! | GATTAATTTATGAAAAGATT+TGG | - | chr3_1:80143599-80143618 | Msa0379190:three_prime_UTR | 15.0% |
| !!! | ATTTGAAATTAAAATTAGGA+TGG | - | chr3_1:80143883-80143902 | Msa0379190:CDS | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | + | chr3_1:80144375-80144394 | None:intergenic | 15.0% |
| !!! | ATTACTATAAATTTTGCTAT+AGG | - | chr3_1:80144675-80144694 | Msa0379190:intron | 15.0% |
| !!! | TTTGTTTGAAAAGTAATTTT+TGG | + | chr3_1:80144818-80144837 | None:intergenic | 15.0% |
| !!! | TATTACGTTTTATTGTATTT+TGG | + | chr3_1:80145699-80145718 | None:intergenic | 15.0% |
| !! | ATTGAAATTAACAATTCTAT+TGG | + | chr3_1:80146050-80146069 | None:intergenic | 15.0% |
| !! | GAAGAAAATATATATAAGTA+TGG | - | chr3_1:80147717-80147736 | Msa0379190:intron | 15.0% |
| !! | TAGAAAAATCATATAAAATG+TGG | - | chr3_1:80147817-80147836 | Msa0379190:intron | 15.0% |
| !! | GTAAACATAAGTATTAAAAA+GGG | + | chr3_1:80148157-80148176 | None:intergenic | 15.0% |
| !! | AGTAAACATAAGTATTAAAA+AGG | + | chr3_1:80148158-80148177 | None:intergenic | 15.0% |
| !!! | TTAATCTTTAAGTTTCAAAT+AGG | - | chr3_1:80149102-80149121 | Msa0379190:intron | 15.0% |
| !! | GACATAGTTTATTAATTAAA+AGG | - | chr3_1:80149489-80149508 | Msa0379190:intron | 15.0% |
| !! | ATTAGAATTAAATAATATGC+TGG | + | chr3_1:80150590-80150609 | Msa0379200:intron | 15.0% |
| !! | TTAGATTGCATTGAAAAAAT+AGG | + | chr3_1:80143814-80143833 | None:intergenic | 20.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | + | chr3_1:80144277-80144296 | None:intergenic | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | - | chr3_1:80144438-80144457 | Msa0379190:intron | 20.0% |
| !! | AAAGTTCGTTTAAATGATAA+TGG | + | chr3_1:80144734-80144753 | None:intergenic | 20.0% |
| !!! | TTTTTAAGCTAAAAGTTGTT+TGG | - | chr3_1:80144912-80144931 | Msa0379190:intron | 20.0% |
| !! | TTAATATGGATGAAGAAAAT+GGG | + | chr3_1:80145235-80145254 | None:intergenic | 20.0% |
| !! | ATTAATATGGATGAAGAAAA+TGG | + | chr3_1:80145236-80145255 | None:intergenic | 20.0% |
| !!! | TGTTGTTTAATTAGTGAAAA+TGG | - | chr3_1:80145369-80145388 | Msa0379190:intron | 20.0% |
| !! | TCTAGAAAATTACTAAGATT+TGG | - | chr3_1:80145731-80145750 | Msa0379190:intron | 20.0% |
| !! | GAATTGTTAATTTCAATAGT+TGG | - | chr3_1:80146053-80146072 | Msa0379190:intron | 20.0% |
| !!! | TAAGTTTGGAATTCAAAATA+TGG | + | chr3_1:80146372-80146391 | None:intergenic | 20.0% |
| !! | AAAATATCAGAAAGACTATA+TGG | + | chr3_1:80146425-80146444 | None:intergenic | 20.0% |
| !! | AAGAAACTATGTAGATTTAT+TGG | + | chr3_1:80146461-80146480 | None:intergenic | 20.0% |
| !! | ACATGTAAAAATGAACAAAA+CGG | - | chr3_1:80147500-80147519 | Msa0379190:intron | 20.0% |
| !! | ATAACAAGTGATATGAAATT+TGG | - | chr3_1:80147548-80147567 | Msa0379190:intron | 20.0% |
| !!! | AGCTTAATTTAAAATGTGTT+TGG | - | chr3_1:80147979-80147998 | Msa0379190:intron | 20.0% |
| !! | TGGATTAAAACAAATATTGA+AGG | - | chr3_1:80148284-80148303 | Msa0379190:intron | 20.0% |
| !! | TTATATATAGAGTATAGTGT+AGG | - | chr3_1:80148357-80148376 | Msa0379190:intron | 20.0% |
| !!! | TTTTTATTTTCTTAAATGGG+TGG | - | chr3_1:80148391-80148410 | Msa0379190:intron | 20.0% |
| !! | AGATCTATTATTACTTTCAA+TGG | - | chr3_1:80148444-80148463 | Msa0379190:intron | 20.0% |
| !! | GATCTATTATTACTTTCAAT+GGG | - | chr3_1:80148445-80148464 | Msa0379190:intron | 20.0% |
| !!! | TCAATTTTGTTAAAATCCAA+GGG | + | chr3_1:80148641-80148660 | Msa0379200:intron | 20.0% |
| !! | TGAAACTTAAAGATTAACTT+GGG | + | chr3_1:80149099-80149118 | Msa0379200:intron | 20.0% |
| !! | TTGAAACTTAAAGATTAACT+TGG | + | chr3_1:80149100-80149119 | Msa0379200:intron | 20.0% |
| !! | ATTAATTATTAACTTACAGC+AGG | - | chr3_1:80149457-80149476 | Msa0379190:intron | 20.0% |
| !! | TTAATTATTAACTTACAGCA+GGG | - | chr3_1:80149458-80149477 | Msa0379190:intron | 20.0% |
| !! | TTTAAAAACTATGGTGTATT+GGG | - | chr3_1:80149762-80149781 | Msa0379190:intron | 20.0% |
| !! | AGTAGTTTATTTAAATTCTC+TGG | + | chr3_1:80150136-80150155 | Msa0379200:intron | 20.0% |
| !!! | AATTTTCCATATCTTACTAA+TGG | - | chr3_1:80150290-80150309 | Msa0379190:intron | 20.0% |
| !! | TATCAATATCTACAATCAAA+AGG | + | chr3_1:80150317-80150336 | Msa0379200:intron | 20.0% |
| !!! | ATTGATTCATTCAATAAATG+TGG | + | chr3_1:80150452-80150471 | Msa0379200:intron | 20.0% |
| !! | AATAATAGAAACACTTTGTA+TGG | - | chr3_1:80150607-80150626 | Msa0379190:intron | 20.0% |
| !!! | CTGTTTTTTTACATTTGTAA+AGG | + | chr3_1:80150667-80150686 | Msa0379200:intron | 20.0% |
| !!! | TGAAAAAAGTGTTTTACTTA+CGG | - | chr3_1:80150756-80150775 | Msa0379190:intron | 20.0% |
| !! | TTAAGCATGCAAAAAAAAAA+AGG | - | chr3_1:80150808-80150827 | Msa0379190:intron | 20.0% |
| !! | AAGGAATTTATTACCATAAA+AGG | - | chr3_1:80150827-80150846 | Msa0379190:intron | 20.0% |
| !!! | AAACTTTGTTGACTTATTTA+TGG | - | chr3_1:80150850-80150869 | Msa0379190:intron | 20.0% |
| !! | TTTATCACTTCATAAGTAAA+CGG | + | chr3_1:80150965-80150984 | Msa0379200:intron | 20.0% |
| ! | AGCGATTAGATATCATTTAT+AGG | - | chr3_1:80143678-80143697 | Msa0379190:three_prime_UTR | 25.0% |
| ! | GCGATTAGATATCATTTATA+GGG | - | chr3_1:80143679-80143698 | Msa0379190:three_prime_UTR | 25.0% |
| !! | AGATATCATTTATAGGGTTT+TGG | - | chr3_1:80143685-80143704 | Msa0379190:three_prime_UTR | 25.0% |
| ! | AAACAATTTGTAATCATGTG+CGG | + | chr3_1:80143777-80143796 | None:intergenic | 25.0% |
| ! | TCTTTCGTTAATCTGTTTAT+CGG | - | chr3_1:80143959-80143978 | Msa0379190:intron | 25.0% |
| ! | TAACCAATAATCACATGTTT+CGG | - | chr3_1:80144598-80144617 | Msa0379190:intron | 25.0% |
| ! | TAAAGAGTTAGAAATCAAGT+AGG | + | chr3_1:80145178-80145197 | None:intergenic | 25.0% |
| ! | TTAAAGAAATAACAAACCAG+TGG | - | chr3_1:80145672-80145691 | Msa0379190:intron | 25.0% |
| ! | TAAAGAAATAACAAACCAGT+GGG | - | chr3_1:80145673-80145692 | Msa0379190:intron | 25.0% |
| ! | TTTATCAGAATGAGAACTTA+GGG | + | chr3_1:80145830-80145849 | None:intergenic | 25.0% |
| !! | CTTAGGTTTTCAAAATTGTT+AGG | + | chr3_1:80145971-80145990 | None:intergenic | 25.0% |
| ! | TTAACAATTCTATTGGTACT+TGG | + | chr3_1:80146043-80146062 | None:intergenic | 25.0% |
| !!! | ATTTACATAGCTTTATGTTC+TGG | + | chr3_1:80146116-80146135 | None:intergenic | 25.0% |
| !!! | AATTATTTTGTGCAAAGCTT+TGG | + | chr3_1:80146153-80146172 | None:intergenic | 25.0% |
| ! | CTTTGCACAAAATAATTGTT+GGG | - | chr3_1:80146156-80146175 | Msa0379190:CDS | 25.0% |
| ! | CAAACATACTTGAAAAATCA+TGG | - | chr3_1:80146213-80146232 | Msa0379190:CDS | 25.0% |
| !!! | TGTATTCATTTCTAGCATAA+TGG | + | chr3_1:80146297-80146316 | None:intergenic | 25.0% |
| !!! | GGTAATAGGTTTTATAAGTT+TGG | + | chr3_1:80146386-80146405 | None:intergenic | 25.0% |
| ! | CATTTAAGGATAAGATTGAA+AGG | + | chr3_1:80146522-80146541 | None:intergenic | 25.0% |
| ! | AGGATTAGATAAACTCATAA+TGG | + | chr3_1:80146566-80146585 | None:intergenic | 25.0% |
| ! | TTTGATTACAAAAGCTTATC+AGG | + | chr3_1:80146601-80146620 | None:intergenic | 25.0% |
| ! | TACTATAATGTTTGGAAAGA+GGG | + | chr3_1:80146662-80146681 | None:intergenic | 25.0% |
| ! | TTTGATTACAAAAGCTTATC+AGG | + | chr3_1:80146601-80146620 | None:intergenic | 25.0% |
| ! | TACTATAATGTTTGGAAAGA+GGG | + | chr3_1:80146662-80146681 | None:intergenic | 25.0% |
| ! | GTTTGACATATGGATAATAT+GGG | - | chr3_1:80147061-80147080 | Msa0379190:intron | 25.0% |
| !!! | AAAAAAAAAGGCATCTGATA+TGG | - | chr3_1:80147644-80147663 | Msa0379190:intron | 25.0% |
| ! | AAGTATGGTTATATAGCATT+TGG | - | chr3_1:80147732-80147751 | Msa0379190:intron | 25.0% |
| !! | GGAATCCTCTAAAAAAAATT+GGG | - | chr3_1:80147757-80147776 | Msa0379190:intron | 25.0% |
| !!! | TGAAACCCAATTTTTTTTAG+AGG | + | chr3_1:80147765-80147784 | None:intergenic | 25.0% |
| ! | CTAAAAAAAATTGGGTTTCA+CGG | - | chr3_1:80147765-80147784 | Msa0379190:intron | 25.0% |
| ! | TTACTTTGTAATAGCTTACA+TGG | + | chr3_1:80147880-80147899 | None:intergenic | 25.0% |
| ! | CATAGATCATTATACTTGAA+AGG | + | chr3_1:80148238-80148257 | None:intergenic | 25.0% |
| ! | TACCATTTATGTTGAATGAT+TGG | - | chr3_1:80148264-80148283 | Msa0379190:intron | 25.0% |
| ! | ATCCAATCATTCAACATAAA+TGG | + | chr3_1:80148269-80148288 | None:intergenic | 25.0% |
| !!! | TTTTATTTGTCACATGATTG+TGG | + | chr3_1:80148425-80148444 | Msa0379200:CDS | 25.0% |
| !! | GTCAATTTTGTTAAAATCCA+AGG | + | chr3_1:80148642-80148661 | Msa0379200:intron | 25.0% |
| !!! | TCATTTTTTAATGTGTAAGC+TGG | - | chr3_1:80148716-80148735 | Msa0379190:intron | 25.0% |
| !! | TAACAAATGTGACATTTTCT+TGG | - | chr3_1:80148936-80148955 | Msa0379190:intron | 25.0% |
| ! | TTGAAACTTTCGAAACTTAA+AGG | + | chr3_1:80149064-80149083 | Msa0379200:intron | 25.0% |
| ! | AAGTTTCGAAAGTTTCAATT+AGG | - | chr3_1:80149066-80149085 | Msa0379190:intron | 25.0% |
| !! | TTAAAGATTAACTTGGGAAA+AGG | + | chr3_1:80149093-80149112 | Msa0379200:intron | 25.0% |
| ! | GATCAAAATCAACAACTTAA+CGG | + | chr3_1:80149194-80149213 | Msa0379200:CDS | 25.0% |
| ! | TAATTATTAACTTACAGCAG+GGG | - | chr3_1:80149459-80149478 | Msa0379190:intron | 25.0% |
| !! | AGGATCTATTTGAAACTTAA+AGG | - | chr3_1:80149509-80149528 | Msa0379190:intron | 25.0% |
| ! | TAAATGAGTTAAGGAGTTAA+AGG | + | chr3_1:80149619-80149638 | Msa0379200:intron | 25.0% |
| !!! | TTAGTGGATTAAATGAGTTA+AGG | + | chr3_1:80149628-80149647 | Msa0379200:intron | 25.0% |
| !! | AGTCAAATGATAAGTGTTTT+CGG | - | chr3_1:80149676-80149695 | Msa0379190:intron | 25.0% |
| ! | ATGAATTGTAAGTAAGACTA+AGG | - | chr3_1:80149707-80149726 | Msa0379190:intron | 25.0% |
| !! | CTTTAAAAACTATGGTGTAT+TGG | - | chr3_1:80149761-80149780 | Msa0379190:intron | 25.0% |
| !!! | AAGCTTAATGTTTTAATGAG+CGG | - | chr3_1:80149807-80149826 | Msa0379190:intron | 25.0% |
| ! | GATACATTAGACAAAAAGAT+GGG | - | chr3_1:80149858-80149877 | Msa0379190:intron | 25.0% |
| ! | ATACATTAGACAAAAAGATG+GGG | - | chr3_1:80149859-80149878 | Msa0379190:intron | 25.0% |
| !!! | TTTATGTGATTTGTTTTGTG+TGG | - | chr3_1:80149917-80149936 | Msa0379190:intron | 25.0% |
| ! | TTGTTAAATAGTGCTTATAG+TGG | - | chr3_1:80150032-80150051 | Msa0379190:intron | 25.0% |
| ! | ATTAATTTACCTTTACACTG+AGG | + | chr3_1:80150375-80150394 | Msa0379200:intron | 25.0% |
| ! | GAATCAATGAATCTAAAAAG+TGG | - | chr3_1:80150464-80150483 | Msa0379190:intron | 25.0% |
| ! | TATTTGGTATCTTGATTTCT+TGG | - | chr3_1:80150708-80150727 | Msa0379190:intron | 25.0% |
| !!! | GAAAAAAGTGTTTTACTTAC+GGG | - | chr3_1:80150757-80150776 | Msa0379190:intron | 25.0% |
| !!! | TTTTTTTTTGCATGCTTAAC+CGG | + | chr3_1:80150807-80150826 | Msa0379200:intron | 25.0% |
| ! | AAGTGATAAATTCAGATGTA+TGG | - | chr3_1:80150975-80150994 | Msa0379190:CDS | 25.0% |
| ! | ATTCACATGTGTAATAAAAC+AGG | - | chr3_1:80151074-80151093 | Msa0379190:intron | 25.0% |
| !!! | AAAACAGGATGCAATTTTTT+TGG | - | chr3_1:80151089-80151108 | Msa0379190:intron | 25.0% |
| ! | TGATTATCAGCCATTTAAAT+TGG | - | chr3_1:80151189-80151208 | Msa0379190:intron | 25.0% |
| !!! | ATTTTGTTTTATGCTCTGAT+AGG | - | chr3_1:80151231-80151250 | Msa0379190:intron | 25.0% |
| !!! | TTTTGTTTTATGCTCTGATA+GGG | - | chr3_1:80151232-80151251 | Msa0379190:intron | 25.0% |
| !!! | TTTTGACTTAATCATGTGTT+TGG | - | chr3_1:80151295-80151314 | Msa0379190:five_prime_UTR | 25.0% |
| TTGTCAATCGAATCAATACT+TGG | - | chr3_1:80143837-80143856 | Msa0379190:CDS | 30.0% | |
| ACAAAATGCAATGAATATGG+GGG | + | chr3_1:80144193-80144212 | None:intergenic | 30.0% | |
| CACAAAATGCAATGAATATG+GGG | + | chr3_1:80144194-80144213 | None:intergenic | 30.0% | |
| CCACAAAATGCAATGAATAT+GGG | + | chr3_1:80144195-80144214 | None:intergenic | 30.0% | |
| TCCACAAAATGCAATGAATA+TGG | + | chr3_1:80144196-80144215 | None:intergenic | 30.0% | |
| TAAAAAAAACCAGGACAAAC+GGG | + | chr3_1:80144791-80144810 | None:intergenic | 30.0% | |
| GTAAAAAAAACCAGGACAAA+CGG | + | chr3_1:80144792-80144811 | None:intergenic | 30.0% | |
| !!! | GTTTGTCCTGGTTTTTTTTA+CGG | - | chr3_1:80144791-80144810 | Msa0379190:intron | 30.0% |
| ! | AATATGTGGTGTTGAAAACA+AGG | + | chr3_1:80145312-80145331 | None:intergenic | 30.0% |
| CGTAACTATATTCGAATATG+TGG | + | chr3_1:80145326-80145345 | None:intergenic | 30.0% | |
| ! | AGATTTTCTCTCAATTATGG+TGG | + | chr3_1:80145591-80145610 | None:intergenic | 30.0% |
| ! | TCGAGATTTTCTCTCAATTA+TGG | + | chr3_1:80145594-80145613 | None:intergenic | 30.0% |
| CTTTATCAGAATGAGAACTT+AGG | + | chr3_1:80145831-80145850 | None:intergenic | 30.0% | |
| GCTTTGCACAAAATAATTGT+TGG | - | chr3_1:80146155-80146174 | Msa0379190:CDS | 30.0% | |
| ATGTTTGACATGTGTGAAAT+TGG | + | chr3_1:80146200-80146219 | None:intergenic | 30.0% | |
| CTATGACTAACAAGAATGTA+TGG | - | chr3_1:80146317-80146336 | Msa0379190:intron | 30.0% | |
| ATCTTATCCTTAAATGCCTT+CGG | - | chr3_1:80146526-80146545 | Msa0379190:intron | 30.0% | |
| ATTACAAAAGCTTATCAGGA+AGG | + | chr3_1:80146597-80146616 | None:intergenic | 30.0% | |
| GTACTATAATGTTTGGAAAG+AGG | + | chr3_1:80146663-80146682 | None:intergenic | 30.0% | |
| ACTGTCAGTACTATAATGTT+TGG | + | chr3_1:80146670-80146689 | None:intergenic | 30.0% | |
| CATGTAGCAATTCAATAGTA+AGG | - | chr3_1:80146748-80146767 | Msa0379190:CDS | 30.0% | |
| GTACTATAATGTTTGGAAAG+AGG | + | chr3_1:80146663-80146682 | None:intergenic | 30.0% | |
| ACTGTCAGTACTATAATGTT+TGG | + | chr3_1:80146670-80146689 | None:intergenic | 30.0% | |
| GGTTTGACATATGGATAATA+TGG | - | chr3_1:80147060-80147079 | Msa0379190:intron | 30.0% | |
| TAATATGGGTATGATGAAAG+TGG | - | chr3_1:80147075-80147094 | Msa0379190:intron | 30.0% | |
| ! | TGACGTTGTTGATGAAATAA+AGG | + | chr3_1:80147328-80147347 | None:intergenic | 30.0% |
| ! | ATAAGTAAGGATCTTTGAGA+TGG | + | chr3_1:80147399-80147418 | None:intergenic | 30.0% |
| CATATATTATCCTACTGATG+AGG | + | chr3_1:80147436-80147455 | None:intergenic | 30.0% | |
| CTCATCAGTAGGATAATATA+TGG | - | chr3_1:80147434-80147453 | Msa0379190:intron | 30.0% | |
| ! | TGCTGTTTATGTAGTATATC+AGG | + | chr3_1:80147481-80147500 | None:intergenic | 30.0% |
| TATGGTTATATAGCATTTGG+CGG | - | chr3_1:80147735-80147754 | Msa0379190:intron | 30.0% | |
| ! | GGGAATCCTCTAAAAAAAAT+TGG | - | chr3_1:80147756-80147775 | Msa0379190:intron | 30.0% |
| TCATATAAAATGTGGCTTGA+AGG | - | chr3_1:80147825-80147844 | Msa0379190:intron | 30.0% | |
| TTACATGGAAGCTTAATTCT+AGG | + | chr3_1:80147865-80147884 | None:intergenic | 30.0% | |
| !! | TCTCTACACTTTTAAGAAGA+AGG | + | chr3_1:80148009-80148028 | None:intergenic | 30.0% |
| AGAGAAGTAGAAAAAAAGTC+AGG | - | chr3_1:80148024-80148043 | Msa0379190:intron | 30.0% | |
| AGATATCTTCTTACATACCT+GGG | + | chr3_1:80148207-80148226 | None:intergenic | 30.0% | |
| TAGATATCTTCTTACATACC+TGG | + | chr3_1:80148208-80148227 | None:intergenic | 30.0% | |
| GGTATGTAAGAAGATATCTA+TGG | - | chr3_1:80148208-80148227 | Msa0379190:intron | 30.0% | |
| ATTGAAGGATATGAAGTTTC+TGG | - | chr3_1:80148299-80148318 | Msa0379190:intron | 30.0% | |
| ATATAGAGTATAGTGTAGGT+AGG | - | chr3_1:80148361-80148380 | Msa0379190:intron | 30.0% | |
| TCTGAATGAAGAAAACAGAA+TGG | + | chr3_1:80148750-80148769 | Msa0379200:intron | 30.0% | |
| GAAACTTAAAGGACTAACTT+GGG | + | chr3_1:80149520-80149539 | Msa0379200:CDS | 30.0% | |
| TGGTCACAAATGATCATTTA+TGG | - | chr3_1:80149262-80149281 | Msa0379190:intron | 30.0% | |
| TGTCAAAACGTTACGTTTAA+TGG | + | chr3_1:80149372-80149391 | Msa0379200:intron | 30.0% | |
| !! | GATGCCTTTTAAAAGTTTCA+GGG | + | chr3_1:80149395-80149414 | Msa0379200:intron | 30.0% |
| GATCCAAATCAACAACTTAA+CGG | - | chr3_1:80149420-80149439 | Msa0379190:intron | 30.0% | |
| GAGAATTCTGTCAAACTAAA+AGG | - | chr3_1:80149540-80149559 | Msa0379190:intron | 30.0% | |
| AAAGGACCAAATGTGATATT+TGG | - | chr3_1:80149558-80149577 | Msa0379190:intron | 30.0% | |
| AATAGGCCAAATATCACATT+TGG | + | chr3_1:80149567-80149586 | Msa0379200:CDS | 30.0% | |
| !! | ACACTTATCATTTGACTTGA+GGG | + | chr3_1:80149673-80149692 | Msa0379200:CDS | 30.0% |
| !! | AACACTTATCATTTGACTTG+AGG | + | chr3_1:80149674-80149693 | Msa0379200:CDS | 30.0% |
| TAAGTAAGACTAAGGCATAA+TGG | - | chr3_1:80149715-80149734 | Msa0379190:intron | 30.0% | |
| AAGTAAGACTAAGGCATAAT+GGG | - | chr3_1:80149716-80149735 | Msa0379190:intron | 30.0% | |
| CACTAACATAAGATAGGATT+AGG | - | chr3_1:80149831-80149850 | Msa0379190:intron | 30.0% | |
| ACATAAGATAGGATTAGGAT+TGG | - | chr3_1:80149836-80149855 | Msa0379190:intron | 30.0% | |
| GGATACATTAGACAAAAAGA+TGG | - | chr3_1:80149857-80149876 | Msa0379190:intron | 30.0% | |
| GACTTGTATAAAGTGCAATA+AGG | - | chr3_1:80149944-80149963 | Msa0379190:intron | 30.0% | |
| ! | AGGAGAGTATATCAAATAGA+TGG | - | chr3_1:80149964-80149983 | Msa0379190:intron | 30.0% |
| TAAAGCAATATTGTCAATCG+CGG | + | chr3_1:80150171-80150190 | Msa0379200:intron | 30.0% | |
| !! | AGACATTTTTGTTTGATCCA+TGG | - | chr3_1:80150204-80150223 | Msa0379190:intron | 30.0% |
| AAAGGACCATTAGTAAGATA+TGG | + | chr3_1:80150299-80150318 | Msa0379200:intron | 30.0% | |
| ! | TGTGAAAACTTCACATTTTG+AGG | - | chr3_1:80150345-80150364 | Msa0379190:intron | 30.0% |
| GGTAAATTAATAGAAACCCA+AGG | - | chr3_1:80150384-80150403 | Msa0379190:intron | 30.0% | |
| TAAGAAATTGCAATTGCCTT+GGG | + | chr3_1:80150403-80150422 | Msa0379200:intron | 30.0% | |
| ATAAGAAATTGCAATTGCCT+TGG | + | chr3_1:80150404-80150423 | Msa0379200:intron | 30.0% | |
| AAGGCAATTGCAATTTCTTA+TGG | - | chr3_1:80150403-80150422 | Msa0379190:intron | 30.0% | |
| TTCATTCAATAAATGTGGTG+TGG | + | chr3_1:80150447-80150466 | Msa0379200:intron | 30.0% | |
| ! | GTCAACAAAGTTTCCTTTTA+TGG | + | chr3_1:80150843-80150862 | Msa0379200:intron | 30.0% |
| AGAGCATAAAACAAAATCAC+GGG | + | chr3_1:80151228-80151247 | Msa0379200:intron | 30.0% | |
| CAGAGCATAAAACAAAATCA+CGG | + | chr3_1:80151229-80151248 | Msa0379200:intron | 30.0% | |
| !!! | TTTGTTTTATGCTCTGATAG+GGG | - | chr3_1:80151233-80151252 | Msa0379190:intron | 30.0% |
| !! | TTTTAGCTGCAGTGTTTTTG+TGG | + | chr3_1:80143648-80143667 | None:intergenic | 35.0% |
| AAGAGAAATTGACTGACAGA+TGG | - | chr3_1:80143993-80144012 | Msa0379190:intron | 35.0% | |
| AAATTGACTGACAGATGGAT+AGG | - | chr3_1:80143998-80144017 | Msa0379190:intron | 35.0% | |
| AGACAGTGCAAAAGAAAGAA+TGG | + | chr3_1:80144143-80144162 | None:intergenic | 35.0% | |
| ! | CCCATATTCATTGCATTTTG+TGG | - | chr3_1:80144192-80144211 | Msa0379190:intron | 35.0% |
| CAATAATCACATGTTTCGGT+CGG | - | chr3_1:80144602-80144621 | Msa0379190:intron | 35.0% | |
| ! | CTTCTAGGCTTGTTTATTGT+CGG | - | chr3_1:80144705-80144724 | Msa0379190:intron | 35.0% |
| AAAAAAAACCAGGACAAACG+GGG | + | chr3_1:80144790-80144809 | None:intergenic | 35.0% | |
| TTTGGACCGTAAAAAAAACC+AGG | + | chr3_1:80144800-80144819 | None:intergenic | 35.0% | |
| AATCCAATAACAGTGCAAGA+TGG | + | chr3_1:80145205-80145224 | None:intergenic | 35.0% | |
| GCGCGAAGAAGAAATTAATA+TGG | + | chr3_1:80145249-80145268 | None:intergenic | 35.0% | |
| GATAAATGTGATGCTATCTC+TGG | + | chr3_1:80145284-80145303 | None:intergenic | 35.0% | |
| TATCACATAAGATGTGTGCA+TGG | - | chr3_1:80145397-80145416 | Msa0379190:intron | 35.0% | |
| !! | TGACTTCCATCTCTAAAATC+AGG | - | chr3_1:80145447-80145466 | Msa0379190:intron | 35.0% |
| AACCTAAAAGATCAAGAGAC+AGG | - | chr3_1:80145526-80145545 | Msa0379190:intron | 35.0% | |
| ! | AACCTGTCTCTTGATCTTTT+AGG | + | chr3_1:80145531-80145550 | None:intergenic | 35.0% |
| AGCGACAAACCTATCAAATA+AGG | - | chr3_1:80145554-80145573 | Msa0379190:intron | 35.0% | |
| GCGACAAACCTATCAAATAA+GGG | - | chr3_1:80145555-80145574 | Msa0379190:intron | 35.0% | |
| ACCTATCAAATAAGGGTTTC+CGG | - | chr3_1:80145562-80145581 | Msa0379190:intron | 35.0% | |
| !! | AATCAAAAAGTGTCCCTCTT+AGG | - | chr3_1:80145626-80145645 | Msa0379190:intron | 35.0% |
| AGAACTTATGTAGCCTAAGA+GGG | + | chr3_1:80145642-80145661 | None:intergenic | 35.0% | |
| !!! | TTTATTGTATTTTGGCCCAC+TGG | + | chr3_1:80145691-80145710 | None:intergenic | 35.0% |
| GCAATTACATACCACTCAAT+GGG | + | chr3_1:80145907-80145926 | None:intergenic | 35.0% | |
| AGCAATTACATACCACTCAA+TGG | + | chr3_1:80145908-80145927 | None:intergenic | 35.0% | |
| GTATGTAATTGCTTGACAGT+TGG | - | chr3_1:80145915-80145934 | Msa0379190:intron | 35.0% | |
| AGTTGATTGGCATATAGCTT+AGG | + | chr3_1:80145988-80146007 | None:intergenic | 35.0% | |
| ATGACTATCATGCAGTTGAT+TGG | + | chr3_1:80146001-80146020 | None:intergenic | 35.0% | |
| !!! | TTCCACCAAATTTTGACTCT+TGG | + | chr3_1:80146079-80146098 | None:intergenic | 35.0% |
| TCTAGCATAATGGTTCATGA+TGG | + | chr3_1:80146287-80146306 | None:intergenic | 35.0% | |
| ! | AGAGCTTTGTCATTGGTAAT+AGG | + | chr3_1:80146400-80146419 | None:intergenic | 35.0% |
| TAGCTACTGAAGTACAACAT+CGG | + | chr3_1:80146498-80146517 | None:intergenic | 35.0% | |
| TTATCAGGAAGGCTAGAAAT+AGG | + | chr3_1:80146586-80146605 | None:intergenic | 35.0% | |
| ACTTCATGTGTCCTTACTAT+TGG | + | chr3_1:80146718-80146737 | None:intergenic | 35.0% | |
| AAGTGTGATAAAGTTGAAGG+AGG | + | chr3_1:80146863-80146882 | None:intergenic | 35.0% | |
| ! | GGAAAGTGTGATAAAGTTGA+AGG | + | chr3_1:80146866-80146885 | None:intergenic | 35.0% |
| ACTTCATGTGTCCTTACTAT+TGG | + | chr3_1:80146718-80146737 | None:intergenic | 35.0% | |
| !!! | TGAAGATTTGGTGGTTTTAC+CGG | - | chr3_1:80147030-80147049 | Msa0379190:intron | 35.0% |
| ! | ACTGCCATAGTTTCAGTTTT+CGG | - | chr3_1:80147120-80147139 | Msa0379190:intron | 35.0% |
| TGCTGATATGGAAAAGAAGA+AGG | + | chr3_1:80147358-80147377 | None:intergenic | 35.0% | |
| ATTATCGCATGATGCTGATA+TGG | + | chr3_1:80147370-80147389 | None:intergenic | 35.0% | |
| ATGGTTATATAGCATTTGGC+GGG | - | chr3_1:80147736-80147755 | Msa0379190:intron | 35.0% | |
| !! | TACACTTTTAAGAAGAAGGC+AGG | + | chr3_1:80148005-80148024 | None:intergenic | 35.0% |
| TCTCGTGTAAAAACAAGGTA+AGG | - | chr3_1:80148056-80148075 | Msa0379190:intron | 35.0% | |
| CTGCATACAATACACCAAAA+TGG | - | chr3_1:80148079-80148098 | Msa0379190:intron | 35.0% | |
| TACAATACACCAAAATGGTG+CGG | - | chr3_1:80148084-80148103 | Msa0379190:intron | 35.0% | |
| AAGTATTAAAAAGGGCAGTC+TGG | + | chr3_1:80148149-80148168 | None:intergenic | 35.0% | |
| AATTCATGCGTAATTAACCC+AGG | - | chr3_1:80148187-80148206 | Msa0379190:intron | 35.0% | |
| ! | ATTTTCTTAAATGGGTGGTC+TGG | - | chr3_1:80148396-80148415 | Msa0379190:intron | 35.0% |
| ! | TAATGTTTTCTCCAGCATGT+GGG | - | chr3_1:80148491-80148510 | Msa0379190:intron | 35.0% |
| ATTCCTAATCACAAGTTCAC+CGG | - | chr3_1:80148560-80148579 | Msa0379190:intron | 35.0% | |
| GCATCTTAAACTGCTTGAAT+AGG | + | chr3_1:80148696-80148715 | Msa0379200:intron | 35.0% | |
| !! | TTCATTCAGAGTATTGTAGC+TGG | - | chr3_1:80148760-80148779 | Msa0379190:intron | 35.0% |
| TTTGGCTAAAAATCCTCATG+TGG | - | chr3_1:80148795-80148814 | Msa0379190:intron | 35.0% | |
| !!! | TACTTTTAGAGCTTGGTCTT+CGG | + | chr3_1:80148866-80148885 | Msa0379200:intron | 35.0% |
| !!! | CGACATTTACTTTTAGAGCT+TGG | + | chr3_1:80148873-80148892 | Msa0379200:intron | 35.0% |
| GATCTATTGCACGTAATGAT+GGG | - | chr3_1:80148958-80148977 | Msa0379190:intron | 35.0% | |
| ATACTCTCATTTGACTCACT+CGG | + | chr3_1:80149007-80149026 | Msa0379200:intron | 35.0% | |
| CGAAACTTAAAGGACTAACT+TGG | + | chr3_1:80149054-80149073 | Msa0379200:intron | 35.0% | |
| TTAAACAGATACTGACAGCA+GGG | + | chr3_1:80149161-80149180 | Msa0379200:CDS | 35.0% | |
| TGTCCAAACGCTATGTTTAA+TGG | - | chr3_1:80149242-80149261 | Msa0379190:intron | 35.0% | |
| TGACCATTAAACATAGCGTT+TGG | + | chr3_1:80149248-80149267 | Msa0379200:intron | 35.0% | |
| ! | GACACCCTGAAACTTTTAAA+AGG | - | chr3_1:80149388-80149407 | Msa0379190:intron | 35.0% |
| !! | CGATGCCTTTTAAAAGTTTC+AGG | + | chr3_1:80149396-80149415 | Msa0379200:intron | 35.0% |
| ! | TAGCCGTTAAGTTGTTGATT+TGG | + | chr3_1:80149188-80149207 | Msa0379200:CDS | 35.0% |
| AACTTAGCAAGGGAGAAAAT+AGG | + | chr3_1:80149584-80149603 | Msa0379200:intron | 35.0% | |
| GTTAAGGAGTTAAAGGTCTA+GGG | + | chr3_1:80149612-80149631 | Msa0379200:intron | 35.0% | |
| AGTTAAGGAGTTAAAGGTCT+AGG | + | chr3_1:80149613-80149632 | Msa0379200:intron | 35.0% | |
| !! | TATCATTTGACTTGAGGGAT+GGG | + | chr3_1:80149668-80149687 | Msa0379200:intron | 35.0% |
| !! | TTATCATTTGACTTGAGGGA+TGG | + | chr3_1:80149669-80149688 | Msa0379200:intron | 35.0% |
| !!! | TTTTTAAAGCTACGAGGTTG+TGG | + | chr3_1:80149750-80149769 | Msa0379200:CDS | 35.0% |
| !!! | CCATAGTTTTTAAAGCTACG+AGG | + | chr3_1:80149756-80149775 | Msa0379200:CDS | 35.0% |
| !! | CCTCGTAGCTTTAAAAACTA+TGG | - | chr3_1:80149753-80149772 | Msa0379190:intron | 35.0% |
| ! | TGTATTGGGCTGAATTTTGA+TGG | - | chr3_1:80149776-80149795 | Msa0379190:intron | 35.0% |
| ! | ACCTTTTGTGAAAAAGATGG+CGG | - | chr3_1:80149886-80149905 | Msa0379190:intron | 35.0% |
| GGATCAAACAAAAATGTCTC+AGG | + | chr3_1:80150203-80150222 | Msa0379200:intron | 35.0% | |
| !! | CAATAGAGCATTTTCCTACT+AGG | + | chr3_1:80150246-80150265 | Msa0379200:intron | 35.0% |
| TTGCTTATAATAGTGACCAG+AGG | - | chr3_1:80150491-80150510 | Msa0379190:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | - | chr3_1:80150492-80150511 | Msa0379190:intron | 35.0% | |
| AAGGCAAAGATACCAAATCA+TGG | + | chr3_1:80150648-80150667 | Msa0379200:intron | 35.0% | |
| !!! | ACACTTTTTTCACCTCACAA+AGG | + | chr3_1:80150748-80150767 | Msa0379200:intron | 35.0% |
| AAGTAAACGGAAATGCTAAC+CGG | + | chr3_1:80150952-80150971 | Msa0379200:intron | 35.0% | |
| !! | GAAATTTGACTTGGCTGATT+GGG | + | chr3_1:80151159-80151178 | Msa0379200:intron | 35.0% |
| CTATTGGTGGAAATTTGACT+TGG | + | chr3_1:80151168-80151187 | Msa0379200:intron | 35.0% | |
| CAAGTCAAATTTCCACCAAT+AGG | - | chr3_1:80151166-80151185 | Msa0379190:intron | 35.0% | |
| AATGGCTGATAATCACCTAT+TGG | + | chr3_1:80151184-80151203 | Msa0379200:intron | 35.0% | |
| GTTCACTGCTCCAATTTAAA+TGG | + | chr3_1:80151202-80151221 | Msa0379200:intron | 35.0% | |
| ! | GTGTTTGGTTTCAATTCTAG+AGG | - | chr3_1:80151310-80151329 | Msa0379190:five_prime_UTR | 35.0% |
| AACACTGCAGCTAAAACGAA+AGG | - | chr3_1:80143652-80143671 | Msa0379190:three_prime_UTR | 40.0% | |
| TTCGACGCTGTTAAAACGAA+AGG | - | chr3_1:80143708-80143727 | Msa0379190:three_prime_UTR | 40.0% | |
| TTCTGTATTTGTCACTGCTG+TGG | - | chr3_1:80144035-80144054 | Msa0379190:intron | 40.0% | |
| CTGTGGTATTTCACATGAAC+TGG | - | chr3_1:80144052-80144071 | Msa0379190:intron | 40.0% | |
| ! | GATATAGGGCCTGTTTGTTT+TGG | - | chr3_1:80144265-80144284 | Msa0379190:intron | 40.0% |
| CGACCGAAACATGTGATTAT+TGG | + | chr3_1:80144604-80144623 | None:intergenic | 40.0% | |
| TTTAGAGATGGAAGTCAAGC+AGG | + | chr3_1:80145444-80145463 | None:intergenic | 40.0% | |
| !! | CGCATTCCTGATTTTAGAGA+TGG | + | chr3_1:80145456-80145475 | None:intergenic | 40.0% |
| ! | TTTCACCTTTTGACGCAGTA+CGG | - | chr3_1:80145481-80145500 | Msa0379190:intron | 40.0% |
| ! | TCCGGAAACCCTTATTTGAT+AGG | + | chr3_1:80145566-80145585 | None:intergenic | 40.0% |
| !! | CTCTCAATTATGGTGGATTC+CGG | + | chr3_1:80145584-80145603 | None:intergenic | 40.0% |
| CAGAACTTATGTAGCCTAAG+AGG | + | chr3_1:80145643-80145662 | None:intergenic | 40.0% | |
| TTAGGGAAGTCAACAAGCAT+GGG | + | chr3_1:80145859-80145878 | None:intergenic | 40.0% | |
| ATTAGGGAAGTCAACAAGCA+TGG | + | chr3_1:80145860-80145879 | None:intergenic | 40.0% | |
| GGGTGGTTTCTTGTTCATTA+GGG | + | chr3_1:80145876-80145895 | None:intergenic | 40.0% | |
| AGGGTGGTTTCTTGTTCATT+AGG | + | chr3_1:80145877-80145896 | None:intergenic | 40.0% | |
| GGAGTATATCTTCTGCACAA+AGG | + | chr3_1:80145950-80145969 | None:intergenic | 40.0% | |
| GTTGGCCAAGAGTCAAAATT+TGG | - | chr3_1:80146071-80146090 | Msa0379190:intron | 40.0% | |
| ACATGTGTGAAATTGGACCA+TGG | + | chr3_1:80146193-80146212 | None:intergenic | 40.0% | |
| ! | GACTTCAGAAAGTATGTTGC+AGG | + | chr3_1:80146248-80146267 | None:intergenic | 40.0% |
| ! | TATGGAGAGAGCTTTGTCAT+TGG | + | chr3_1:80146407-80146426 | None:intergenic | 40.0% |
| AGTACAACATCGGATATCTG+AGG | + | chr3_1:80146488-80146507 | None:intergenic | 40.0% | |
| !! | TAGACAACCGAAGGCATTTA+AGG | + | chr3_1:80146536-80146555 | None:intergenic | 40.0% |
| AAGCGTGATAAAGTTGAAGG+AGG | + | chr3_1:80146626-80146645 | None:intergenic | 40.0% | |
| ! | GGAAAGCGTGATAAAGTTGA+AGG | + | chr3_1:80146629-80146648 | None:intergenic | 40.0% |
| TTACTATTGGACCATCACCA+CGG | + | chr3_1:80146705-80146724 | None:intergenic | 40.0% | |
| TTACTATTGGACCATCACCA+CGG | + | chr3_1:80146705-80146724 | None:intergenic | 40.0% | |
| CATATTGCAACTTGTCGATC+CGG | - | chr3_1:80146985-80147004 | Msa0379190:intron | 40.0% | |
| GGGTATGATGAAAGTGGTTT+AGG | - | chr3_1:80147081-80147100 | Msa0379190:intron | 40.0% | |
| ! | CATAGTTTCAGTTTTCGGCA+CGG | - | chr3_1:80147125-80147144 | Msa0379190:intron | 40.0% |
| ! | TGCTGCTTCTACTTTCATCT+CGG | - | chr3_1:80147173-80147192 | Msa0379190:intron | 40.0% |
| TTCATCTCGGTGACAATTTC+AGG | - | chr3_1:80147186-80147205 | Msa0379190:intron | 40.0% | |
| ! | GGACTAATTTTTGTTGCTGC+AGG | - | chr3_1:80147255-80147274 | Msa0379190:intron | 40.0% |
| ! | TGCAGGAAGAGTCTTATCAT+TGG | - | chr3_1:80147272-80147291 | Msa0379190:intron | 40.0% |
| ! | AGGAAGAGTCTTATCATTGG+TGG | - | chr3_1:80147275-80147294 | Msa0379190:intron | 40.0% |
| ! | GTCTTATCATTGGTGGATGT+TGG | - | chr3_1:80147282-80147301 | Msa0379190:intron | 40.0% |
| !! | GTAAGGATCTTTGAGATGGT+GGG | + | chr3_1:80147395-80147414 | None:intergenic | 40.0% |
| !! | AGTAAGGATCTTTGAGATGG+TGG | + | chr3_1:80147396-80147415 | None:intergenic | 40.0% |
| TATGAGGGAGCAGATAAGTA+AGG | + | chr3_1:80147412-80147431 | None:intergenic | 40.0% | |
| TCCTACTGATGAGGATATGA+GGG | + | chr3_1:80147427-80147446 | None:intergenic | 40.0% | |
| ATCCTACTGATGAGGATATG+AGG | + | chr3_1:80147428-80147447 | None:intergenic | 40.0% | |
| ! | CAGGATTTTGTCATACGTAG+TGG | + | chr3_1:80147462-80147481 | None:intergenic | 40.0% |
| AAAACGGCACAATACGACAA+TGG | - | chr3_1:80147516-80147535 | Msa0379190:intron | 40.0% | |
| CAGAAAGCAACTCACAGAAA+TGG | - | chr3_1:80147667-80147686 | Msa0379190:intron | 40.0% | |
| AAAGCAACTCACAGAAATGG+CGG | - | chr3_1:80147670-80147689 | Msa0379190:intron | 40.0% | |
| CGCAATGGAAAATTGTGAGT+AGG | - | chr3_1:80147693-80147712 | Msa0379190:intron | 40.0% | |
| !! | TGGAAGGAGCTTTAAGCAAA+AGG | + | chr3_1:80147912-80147931 | None:intergenic | 40.0% |
| ACGAGTCTCGTGTAAAAACA+AGG | - | chr3_1:80148051-80148070 | Msa0379190:intron | 40.0% | |
| ! | GTAATGTTTTCTCCAGCATG+TGG | - | chr3_1:80148490-80148509 | Msa0379190:intron | 40.0% |
| TTACATTGCTATCAGTCCCT+TGG | - | chr3_1:80148622-80148641 | Msa0379190:intron | 40.0% | |
| AACTTATACTGCTCCACATG+AGG | + | chr3_1:80148811-80148830 | Msa0379200:CDS | 40.0% | |
| !!! | ACTTTTAGAGCTTGGTCTTC+GGG | + | chr3_1:80148865-80148884 | Msa0379200:intron | 40.0% |
| GGATCTATTGCACGTAATGA+TGG | - | chr3_1:80148957-80148976 | Msa0379190:intron | 40.0% | |
| TAAACAGATACTGACAGCAG+GGG | + | chr3_1:80149160-80149179 | Msa0379200:CDS | 40.0% | |
| GTTAAACAGATACTGACAGC+AGG | + | chr3_1:80149162-80149181 | Msa0379200:CDS | 40.0% | |
| TTAACTTACAGCAGGGGTAA+CGG | - | chr3_1:80149465-80149484 | Msa0379190:intron | 40.0% | |
| TAGGGTTCGAAACTTAGCAA+GGG | + | chr3_1:80149594-80149613 | Msa0379200:intron | 40.0% | |
| AGCGGTCACTAACATAAGAT+AGG | - | chr3_1:80149825-80149844 | Msa0379190:intron | 40.0% | |
| CATTAGACAAAAAGATGGGG+TGG | - | chr3_1:80149862-80149881 | Msa0379190:intron | 40.0% | |
| ! | GGCACCTTTTGTGAAAAAGA+TGG | - | chr3_1:80149883-80149902 | Msa0379190:intron | 40.0% |
| !! | TCCGCCATCTTTTTCACAAA+AGG | + | chr3_1:80149890-80149909 | Msa0379200:intron | 40.0% |
| CCAATCTATAGTCTGCTCAA+TGG | + | chr3_1:80149994-80150013 | Msa0379200:intron | 40.0% | |
| CCATTGAGCAGACTATAGAT+TGG | - | chr3_1:80149991-80150010 | Msa0379190:intron | 40.0% | |
| TCATAATGTACTACACCCTC+TGG | + | chr3_1:80150510-80150529 | Msa0379200:intron | 40.0% | |
| CTGGCATTTACGACAAAATC+AGG | + | chr3_1:80150571-80150590 | Msa0379200:intron | 40.0% | |
| CTTTGTTCACGACCATGATT+TGG | - | chr3_1:80150633-80150652 | Msa0379190:intron | 40.0% | |
| TACTTACGGGTCATGTTAAC+CGG | - | chr3_1:80150770-80150789 | Msa0379190:intron | 40.0% | |
| TTGTCAGTAATCATCAAGCC+CGG | - | chr3_1:80151124-80151143 | Msa0379190:intron | 40.0% | |
| !! | GGAAATTTGACTTGGCTGAT+TGG | + | chr3_1:80151160-80151179 | Msa0379200:intron | 40.0% |
| ! | TTTTATGCTCTGATAGGGGA+AGG | - | chr3_1:80151237-80151256 | Msa0379190:intron | 40.0% |
| TTGTAATCATGTGCGGCGAA+AGG | + | chr3_1:80143770-80143789 | None:intergenic | 45.0% | |
| TGACTGACAGATGGATAGGA+AGG | - | chr3_1:80144002-80144021 | Msa0379190:intron | 45.0% | |
| GTATTTCACATGAACTGGCG+AGG | - | chr3_1:80144057-80144076 | Msa0379190:intron | 45.0% | |
| ACCTCAAGAACAACAAGAGC+AGG | + | chr3_1:80144117-80144136 | None:intergenic | 45.0% | |
| GCTATAGGAGTGAGTCTTCT+AGG | - | chr3_1:80144690-80144709 | Msa0379190:intron | 45.0% | |
| CCAATAACAGTGCAAGATGG+AGG | + | chr3_1:80145202-80145221 | None:intergenic | 45.0% | |
| CCTCCATCTTGCACTGTTAT+TGG | - | chr3_1:80145199-80145218 | Msa0379190:intron | 45.0% | |
| CTTAGGGTCGAGTTCTTTAG+AGG | + | chr3_1:80145814-80145833 | None:intergenic | 45.0% | |
| GGCCAAGAGTCAAAATTTGG+TGG | - | chr3_1:80146074-80146093 | Msa0379190:intron | 45.0% | |
| !! | GTGCAAAGCTTTGGATGATG+AGG | + | chr3_1:80146144-80146163 | None:intergenic | 45.0% |
| TGTGTGAAATTGGACCATGG+TGG | + | chr3_1:80146190-80146209 | None:intergenic | 45.0% | |
| GGAGTTGTGCATGTGATACT+TGG | - | chr3_1:80146338-80146357 | Msa0379190:intron | 45.0% | |
| GGAACATGATAGACAACCGA+AGG | + | chr3_1:80146545-80146564 | None:intergenic | 45.0% | |
| !! | GTGGTGATGGTCCAATAGTA+AGG | - | chr3_1:80146704-80146723 | Msa0379190:CDS | 45.0% |
| CATGTAGCAACTTGTCGATC+CGG | - | chr3_1:80146792-80146811 | Msa0379190:intron | 45.0% | |
| !! | GTGGTGATGGTCCAATAGTA+AGG | - | chr3_1:80146704-80146723 | Msa0379190:CDS | 45.0% |
| !!! | AGATTTGGTGGTTTTACCGG+TGG | - | chr3_1:80147033-80147052 | Msa0379190:intron | 45.0% |
| ATATGTCAAACCTCCTCCAC+CGG | + | chr3_1:80147052-80147071 | None:intergenic | 45.0% | |
| CGTGCCGAAAACTGAAACTA+TGG | + | chr3_1:80147127-80147146 | None:intergenic | 45.0% | |
| TTCGGCACGGAGTTTATTTC+AGG | - | chr3_1:80147138-80147157 | Msa0379190:intron | 45.0% | |
| ACGGAGTTTATTTCAGGAGC+AGG | - | chr3_1:80147144-80147163 | Msa0379190:intron | 45.0% | |
| TCCCTCATATCCTCATCAGT+AGG | - | chr3_1:80147423-80147442 | Msa0379190:intron | 45.0% | |
| !! | TGAAGTTTCTGGCAAAGTCG+AGG | - | chr3_1:80148310-80148329 | Msa0379190:intron | 45.0% |
| ACCACTATCACAGGTGAAGA+TGG | - | chr3_1:80148524-80148543 | Msa0379190:intron | 45.0% | |
| ACCATCTTCACCTGTGATAG+TGG | + | chr3_1:80148528-80148547 | Msa0379200:intron | 45.0% | |
| ACTATCACAGGTGAAGATGG+TGG | - | chr3_1:80148527-80148546 | Msa0379190:intron | 45.0% | |
| CTATCACAGGTGAAGATGGT+GGG | - | chr3_1:80148528-80148547 | Msa0379190:intron | 45.0% | |
| TTGCCGGTGAACTTGTGATT+AGG | + | chr3_1:80148566-80148585 | Msa0379200:intron | 45.0% | |
| CTCTTGATACGCCAATGAGA+CGG | + | chr3_1:80148602-80148621 | Msa0379200:intron | 45.0% | |
| GCAGTATAAGTTGCACGAAC+TGG | - | chr3_1:80148819-80148838 | Msa0379190:intron | 45.0% | |
| ! | CTCACTCGGCTTGAATTTCA+TGG | + | chr3_1:80148993-80149012 | Msa0379200:intron | 45.0% |
| AAACAGATACTGACAGCAGG+GGG | + | chr3_1:80149159-80149178 | Msa0379200:CDS | 45.0% | |
| !! | TGCTGCCTTTTAAAAGCTCC+TGG | - | chr3_1:80149218-80149237 | Msa0379190:intron | 45.0% |
| !! | GCTGCCTTTTAAAAGCTCCT+GGG | - | chr3_1:80149219-80149238 | Msa0379190:intron | 45.0% |
| ! | GACACCCAGGAGCTTTTAAA+AGG | + | chr3_1:80149226-80149245 | Msa0379200:intron | 45.0% |
| CTAGGGTTCGAAACTTAGCA+AGG | + | chr3_1:80149595-80149614 | Msa0379200:intron | 45.0% | |
| AATAGTGCTTATAGTGGCGC+TGG | - | chr3_1:80150038-80150057 | Msa0379190:intron | 45.0% | |
| !! | TGAGGAGTACCTCAGTGTAA+AGG | - | chr3_1:80150363-80150382 | Msa0379190:intron | 45.0% |
| TTCTTATGGAGTACACCCTC+TGG | - | chr3_1:80150417-80150436 | Msa0379190:intron | 45.0% | |
| AGTAATCTTAACCAGTGCCC+CGG | - | chr3_1:80150921-80150940 | Msa0379190:CDS | 45.0% | |
| GGCTGATAATCACCTATTGG+TGG | + | chr3_1:80151181-80151200 | Msa0379200:intron | 45.0% | |
| !!! | AATAATTTGAAATTAAAATT+AGG | - | chr3_1:80143879-80143898 | Msa0379190:CDS | 5.0% |
| !! | TAATTTAATAAAATGATATA+GGG | - | chr3_1:80144251-80144270 | Msa0379190:intron | 5.0% |
| !! | ATAAAAACAAATAAAAAAAA+AGG | - | chr3_1:80147632-80147651 | Msa0379190:intron | 5.0% |
| !!! | TTATTTTTTATTTTCTTAAA+TGG | - | chr3_1:80148387-80148406 | Msa0379190:intron | 5.0% |
| !!! | TATTTTTTATTTTCTTAAAT+GGG | - | chr3_1:80148388-80148407 | Msa0379190:intron | 5.0% |
| TGCACATATACACCAGCGCA+TGG | + | chr3_1:80144088-80144107 | None:intergenic | 50.0% | |
| !! | GCCTGCTCTTGTTGTTCTTG+AGG | - | chr3_1:80144113-80144132 | Msa0379190:intron | 50.0% |
| ATACTTAGCCCCGTTTGTCC+TGG | - | chr3_1:80144779-80144798 | Msa0379190:intron | 50.0% | |
| AGAGATGGAAGTCAAGCAGG+AGG | + | chr3_1:80145441-80145460 | None:intergenic | 50.0% | |
| TGCTTCCGTACTGCGTCAAA+AGG | + | chr3_1:80145489-80145508 | None:intergenic | 50.0% | |
| TTTGACGCAGTACGGAAGCA+AGG | - | chr3_1:80145489-80145508 | Msa0379190:intron | 50.0% | |
| TTGACGCAGTACGGAAGCAA+GGG | - | chr3_1:80145490-80145509 | Msa0379190:intron | 50.0% | |
| ! | GTCGAGTTCTTTAGAGGTGG+AGG | + | chr3_1:80145808-80145827 | None:intergenic | 50.0% |
| ! | AGGGTCGAGTTCTTTAGAGG+TGG | + | chr3_1:80145811-80145830 | None:intergenic | 50.0% |
| TGAACAAGAAACCACCCTCC+TGG | - | chr3_1:80145879-80145898 | Msa0379190:intron | 50.0% | |
| CATACCACTCAATGGGATCC+AGG | + | chr3_1:80145900-80145919 | None:intergenic | 50.0% | |
| GTTTGGAAAGAGGGCTATGC+AGG | + | chr3_1:80146653-80146672 | None:intergenic | 50.0% | |
| TGTCGATCCGGTGGTTTCTT+CGG | - | chr3_1:80146804-80146823 | Msa0379190:intron | 50.0% | |
| GTTTGGAAAGAGGGCTATGC+AGG | + | chr3_1:80146653-80146672 | None:intergenic | 50.0% | |
| ACAGTCTCTCCTTTATGCCG+TGG | - | chr3_1:80146922-80146941 | Msa0379190:intron | 50.0% | |
| TCTCCTTTATGCCGTGGTGA+TGG | - | chr3_1:80146928-80146947 | Msa0379190:intron | 50.0% | |
| ATTGCAACTTGTCGATCCGG+TGG | - | chr3_1:80146988-80147007 | Msa0379190:intron | 50.0% | |
| TGTCGATCCGGTGGTTTCTT+CGG | - | chr3_1:80146804-80146823 | Msa0379190:intron | 50.0% | |
| AGCGGCGATTGAAGATTTGG+TGG | - | chr3_1:80147021-80147040 | Msa0379190:intron | 50.0% | |
| !! | TTTGGTGGTTTTACCGGTGG+AGG | - | chr3_1:80147036-80147055 | Msa0379190:intron | 50.0% |
| GGTGGAGGAGGTTTGACATA+TGG | - | chr3_1:80147051-80147070 | Msa0379190:intron | 50.0% | |
| ACGGCACAATACGACAATGG+TGG | - | chr3_1:80147519-80147538 | Msa0379190:intron | 50.0% | |
| GTGGCTTGAAGGAATCGAAG+AGG | - | chr3_1:80147836-80147855 | Msa0379190:intron | 50.0% | |
| ! | GTTTTCTCCAGCATGTGGGT+TGG | - | chr3_1:80148495-80148514 | Msa0379190:intron | 50.0% |
| TGGTGGTTGACCACTATCAC+AGG | - | chr3_1:80148515-80148534 | Msa0379190:intron | 50.0% | |
| TATTGTAGCTGGTATGCGCG+AGG | - | chr3_1:80148771-80148790 | Msa0379190:intron | 50.0% | |
| GGGATTGCTGTCCTCCAAAA+GGG | + | chr3_1:80148845-80148864 | Msa0379200:CDS | 50.0% | |
| ATACTGACAGCAGGGGGTAA+TGG | + | chr3_1:80149153-80149172 | Msa0379200:CDS | 50.0% | |
| AACATAGCGTTTGGACACCC+AGG | + | chr3_1:80149239-80149258 | Msa0379200:intron | 50.0% | |
| CACTCACGTGGTTGAGTTAG+TGG | + | chr3_1:80149644-80149663 | Msa0379200:intron | 50.0% | |
| ! | ATAGTGGCGCTGGAACATAG+CGG | - | chr3_1:80150048-80150067 | Msa0379190:intron | 50.0% |
| AGCGCATCGCAAAGCAATAG+TGG | + | chr3_1:80150086-80150105 | Msa0379200:intron | 50.0% | |
| ATGTGGTGTGGTCTACCAGA+GGG | + | chr3_1:80150435-80150454 | Msa0379200:intron | 50.0% | |
| AATGTGGTGTGGTCTACCAG+AGG | + | chr3_1:80150436-80150455 | Msa0379200:intron | 50.0% | |
| CTTTCATGTGCGCCTTTGTG+AGG | - | chr3_1:80150733-80150752 | Msa0379190:intron | 50.0% | |
| GTAATCTTAACCAGTGCCCC+GGG | - | chr3_1:80150922-80150941 | Msa0379190:CDS | 50.0% | |
| TAATCTTAACCAGTGCCCCG+GGG | - | chr3_1:80150923-80150942 | Msa0379190:CDS | 50.0% | |
| !! | TTGACTTGGCTGATTGGGAG+TGG | + | chr3_1:80151154-80151173 | Msa0379200:intron | 50.0% |
| CTCTGATAGGGGAAGGACAA+GGG | - | chr3_1:80151244-80151263 | Msa0379190:intron | 50.0% | |
| ! | GCTTAGACTGTTCGACTCGC+AGG | - | chr3_1:80143737-80143756 | Msa0379190:three_prime_UTR | 55.0% |
| TGGAGGAGACTGATGCAGGA+GGG | + | chr3_1:80145791-80145810 | None:intergenic | 55.0% | |
| CCACTCAATGGGATCCAGGA+GGG | + | chr3_1:80145896-80145915 | None:intergenic | 55.0% | |
| ACCACTCAATGGGATCCAGG+AGG | + | chr3_1:80145897-80145916 | None:intergenic | 55.0% | |
| ! | GTTGGGTCGATTAGCCACCA+TGG | - | chr3_1:80146173-80146192 | Msa0379190:CDS | 55.0% |
| TGGAAAGAGGGCTATGCAGG+TGG | + | chr3_1:80146650-80146669 | None:intergenic | 55.0% | |
| ACAGTCTCTCCCTTATGCCG+TGG | - | chr3_1:80146685-80146704 | Msa0379190:intron | 55.0% | |
| TCTCCCTTATGCCGTGGTGA+TGG | - | chr3_1:80146691-80146710 | Msa0379190:CDS | 55.0% | |
| GGACCATCACCACGGCATAA+GGG | + | chr3_1:80146697-80146716 | None:intergenic | 55.0% | |
| TGGACCATCACCACGGCATA+AGG | + | chr3_1:80146698-80146717 | None:intergenic | 55.0% | |
| GTAGCAACTTGTCGATCCGG+TGG | - | chr3_1:80146795-80146814 | Msa0379190:intron | 55.0% | |
| TGGAAAGAGGGCTATGCAGG+TGG | + | chr3_1:80146650-80146669 | None:intergenic | 55.0% | |
| GGACCATCACCACGGCATAA+AGG | + | chr3_1:80146697-80146716 | None:intergenic | 55.0% | |
| GGCAGCGGCGATTGAAGATT+TGG | - | chr3_1:80147018-80147037 | Msa0379190:intron | 55.0% | |
| !! | AGTCCAGAGCTTGCTACAGC+TGG | + | chr3_1:80147240-80147259 | None:intergenic | 55.0% |
| TCACAGAAATGGCGGCGCAA+TGG | - | chr3_1:80147678-80147697 | Msa0379190:intron | 55.0% | |
| AAAATGGTGCGGTGCCTTCC+CGG | - | chr3_1:80148095-80148114 | Msa0379190:intron | 55.0% | |
| CTTCCCGGACCTTGCATATG+CGG | - | chr3_1:80148110-80148129 | Msa0379190:intron | 55.0% | |
| TTCCCGGACCTTGCATATGC+GGG | - | chr3_1:80148111-80148130 | Msa0379190:intron | 55.0% | |
| CTAAGGCTCCCGCATATGCA+AGG | + | chr3_1:80148122-80148141 | None:intergenic | 55.0% | |
| AAGGGCAGTCTGGTGCACTA+AGG | + | chr3_1:80148139-80148158 | None:intergenic | 55.0% | |
| !! | TTCTCCAGCATGTGGGTTGG+TGG | - | chr3_1:80148498-80148517 | Msa0379190:intron | 55.0% |
| TCAACCACCAACCCACATGC+TGG | + | chr3_1:80148505-80148524 | Msa0379200:intron | 55.0% | |
| ! | AGCTGGTATGCGCGAGGTTT+TGG | - | chr3_1:80148777-80148796 | Msa0379190:intron | 55.0% |
| ! | GTTGCACGAACTGGCCCTTT+TGG | - | chr3_1:80148828-80148847 | Msa0379190:intron | 55.0% |
| CGGGATTGCTGTCCTCCAAA+AGG | + | chr3_1:80148846-80148865 | Msa0379200:CDS | 55.0% | |
| TCGACTCAGCTCAGCCTAGT+AGG | - | chr3_1:80150229-80150248 | Msa0379190:intron | 55.0% | |
| GGTCATGTTAACCGGTGCTC+CGG | - | chr3_1:80150778-80150797 | Msa0379190:intron | 55.0% | |
| GTCATGTTAACCGGTGCTCC+GGG | - | chr3_1:80150779-80150798 | Msa0379190:intron | 55.0% | |
| TTGCATGCTTAACCGGTGCC+CGG | + | chr3_1:80150800-80150819 | Msa0379200:intron | 55.0% | |
| AATCTTAACCAGTGCCCCGG+GGG | - | chr3_1:80150924-80150943 | Msa0379190:CDS | 55.0% | |
| CTGATTGGGAGTGGCTAACC+GGG | + | chr3_1:80151145-80151164 | Msa0379200:intron | 55.0% | |
| GCTGATTGGGAGTGGCTAAC+CGG | + | chr3_1:80151146-80151165 | Msa0379200:intron | 55.0% | |
| GCTCTGATAGGGGAAGGACA+AGG | - | chr3_1:80151243-80151262 | Msa0379190:intron | 55.0% | |
| GTGGAGGAGACTGATGCAGG+AGG | + | chr3_1:80145792-80145811 | None:intergenic | 60.0% | |
| GAGGTGGAGGAGACTGATGC+AGG | + | chr3_1:80145795-80145814 | None:intergenic | 60.0% | |
| CTCAATGGGATCCAGGAGGG+TGG | + | chr3_1:80145893-80145912 | None:intergenic | 60.0% | |
| CCCTCCTGGATCCCATTGAG+TGG | - | chr3_1:80145893-80145912 | Msa0379190:intron | 60.0% | |
| TCCGGTGGTTTCTTCGGCAG+CGG | - | chr3_1:80146810-80146829 | Msa0379190:intron | 60.0% | |
| ACCGCTGCCGAAGAAACCAC+CGG | + | chr3_1:80146814-80146833 | None:intergenic | 60.0% | |
| TCCGGTGGTTTCTTCGGCAG+CGG | - | chr3_1:80146810-80146829 | Msa0379190:intron | 60.0% | |
| !! | GGTGGTTTTACCGGTGGAGG+AGG | - | chr3_1:80147039-80147058 | Msa0379190:intron | 60.0% |
| CTGCCAGCTGTAGCAAGCTC+TGG | - | chr3_1:80147234-80147253 | Msa0379190:intron | 60.0% | |
| !!! | GGGAAGGCACCGCACCATTT+TGG | + | chr3_1:80148096-80148115 | None:intergenic | 60.0% |
| CGCATATGCAAGGTCCGGGA+AGG | + | chr3_1:80148112-80148131 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAAGGTCC+GGG | + | chr3_1:80148116-80148135 | None:intergenic | 60.0% | |
| GCTCCCGCATATGCAAGGTC+CGG | + | chr3_1:80148117-80148136 | None:intergenic | 60.0% | |
| ! | GCACGAACTGGCCCTTTTGG+AGG | - | chr3_1:80148831-80148850 | Msa0379190:intron | 60.0% |
| TGAGGGATGGGTCACTCACG+TGG | + | chr3_1:80149656-80149675 | Msa0379200:intron | 60.0% | |
| GCTGAGCTGAGTCGACACCA+TGG | + | chr3_1:80150224-80150243 | Msa0379200:intron | 60.0% | |
| AAATGCTAACCGGTGCCCCC+GGG | + | chr3_1:80150942-80150961 | Msa0379200:intron | 60.0% | |
| GAAATGCTAACCGGTGCCCC+CGG | + | chr3_1:80150943-80150962 | Msa0379200:intron | 60.0% | |
| GGCGAGGTTACTCCATGCGC+TGG | - | chr3_1:80144073-80144092 | Msa0379190:intron | 65.0% | |
| GCCGCTGCCGAAGAAACCAC+CGG | + | chr3_1:80147007-80147026 | None:intergenic | 65.0% | |
| TTAACCGGTGCTCCGGGCAC+CGG | - | chr3_1:80150785-80150804 | Msa0379190:intron | 65.0% | |
| TTAACCGGTGCCCGGAGCAC+CGG | + | chr3_1:80150792-80150811 | Msa0379200:intron | 65.0% | |
| AATGCTAACCGGTGCCCCCG+GGG | + | chr3_1:80150941-80150960 | Msa0379200:intron | 65.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | - | chr3_1:80150930-80150949 | Msa0379190:CDS | 75.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | + | chr3_1:80150935-80150954 | Msa0379200:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 80143591 | 80151427 | 80143591 | ID=Msa0379190;Name=Msa0379190 |
| chr3_1 | mRNA | 80143591 | 80151427 | 80143591 | ID=Msa0379190-mRNA-1;Parent=Msa0379190;Name=Msa0379190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168|1|1|1|0.66|0.57|7|236|222 |
| chr3_1 | exon | 80143591 | 80143922 | 80143591 | ID=Msa0379190-mRNA-1:exon:19922;Parent=Msa0379190-mRNA-1 |
| chr3_1 | exon | 80144634 | 80144690 | 80144634 | ID=Msa0379190-mRNA-1:exon:19921;Parent=Msa0379190-mRNA-1 |
| chr3_1 | exon | 80146136 | 80146249 | 80146136 | ID=Msa0379190-mRNA-1:exon:19920;Parent=Msa0379190-mRNA-1 |
| chr3_1 | exon | 80146357 | 80146512 | 80146357 | ID=Msa0379190-mRNA-1:exon:19919;Parent=Msa0379190-mRNA-1 |
| chr3_1 | exon | 80146687 | 80146809 | 80146687 | ID=Msa0379190-mRNA-1:exon:19918;Parent=Msa0379190-mRNA-1 |
| chr3_1 | exon | 80150884 | 80151006 | 80150884 | ID=Msa0379190-mRNA-1:exon:19917;Parent=Msa0379190-mRNA-1 |
| chr3_1 | exon | 80151260 | 80151427 | 80151260 | ID=Msa0379190-mRNA-1:exon:19916;Parent=Msa0379190-mRNA-1 |
| chr3_1 | five_prime_UTR | 80151260 | 80151427 | 80151260 | ID=Msa0379190-mRNA-1:five_prime_utr;Parent=Msa0379190-mRNA-1 |
| chr3_1 | CDS | 80150884 | 80151006 | 80150884 | ID=Msa0379190-mRNA-1:cds;Parent=Msa0379190-mRNA-1 |
| chr3_1 | CDS | 80146687 | 80146809 | 80146687 | ID=Msa0379190-mRNA-1:cds;Parent=Msa0379190-mRNA-1 |
| chr3_1 | CDS | 80146357 | 80146512 | 80146357 | ID=Msa0379190-mRNA-1:cds;Parent=Msa0379190-mRNA-1 |
| chr3_1 | CDS | 80146136 | 80146249 | 80146136 | ID=Msa0379190-mRNA-1:cds;Parent=Msa0379190-mRNA-1 |
| chr3_1 | CDS | 80144634 | 80144690 | 80144634 | ID=Msa0379190-mRNA-1:cds;Parent=Msa0379190-mRNA-1 |
| chr3_1 | CDS | 80143827 | 80143922 | 80143827 | ID=Msa0379190-mRNA-1:cds;Parent=Msa0379190-mRNA-1 |
| chr3_1 | three_prime_UTR | 80143591 | 80143826 | 80143591 | ID=Msa0379190-mRNA-1:three_prime_utr;Parent=Msa0379190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
