Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379310 | GAU23671.1 | 62.150 | 214 | 76 | 3 | 4 | 212 | 241 | 454 | 4.07e-79 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379310 | sp|Q56X46|MSL2_ARATH | 57.944 | 214 | 85 | 3 | 4 | 212 | 239 | 452 | 4.80e-76 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379310 | A0A2Z6LVY4 | 62.150 | 214 | 76 | 3 | 4 | 212 | 241 | 454 | 1.95e-79 | 261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0379190 | Msa0379310 | 0.998551 | 1.700273e-268 | -8.615850e-47 |
| Msa0379310 | Msa0518930 | 0.803610 | 3.210708e-49 | -8.615850e-47 |
| Msa0379310 | Msa0518980 | 0.802732 | 4.878023e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379310 | MtrunA17_Chr3g0132931 | 61.215 | 214 | 78 | 3 | 4 | 212 | 248 | 461 | 2.97e-81 | 256 |
| Msa0379310 | MtrunA17_Chr5g0412241 | 55.607 | 214 | 90 | 3 | 4 | 212 | 236 | 449 | 1.28e-75 | 241 |
| Msa0379310 | MtrunA17_Chr3g0132961 | 55.607 | 214 | 90 | 3 | 4 | 212 | 251 | 464 | 9.34e-74 | 234 |
| Msa0379310 | MtrunA17_Chr3g0132941 | 30.380 | 237 | 110 | 9 | 3 | 212 | 51 | 259 | 2.17e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379310 | AT5G10490.2 | 57.944 | 214 | 85 | 3 | 4 | 212 | 211 | 424 | 2.34e-77 | 245 |
| Msa0379310 | AT5G10490.3 | 57.944 | 214 | 85 | 3 | 4 | 212 | 237 | 450 | 4.50e-77 | 244 |
| Msa0379310 | AT5G10490.1 | 57.944 | 214 | 85 | 3 | 4 | 212 | 239 | 452 | 4.88e-77 | 244 |
| Msa0379310 | AT1G58200.2 | 52.336 | 214 | 97 | 3 | 4 | 212 | 241 | 454 | 7.11e-72 | 231 |
| Msa0379310 | AT1G58200.1 | 52.336 | 214 | 97 | 3 | 4 | 212 | 241 | 454 | 7.11e-72 | 231 |
Find 63 sgRNAs with CRISPR-Local
Find 502 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGGATATGAAGTTTC+TGG | 0.152550 | 3_1:+80381016 | Msa0379310:CDS |
| ATCCAATCATTCAACATAAA+TGG | 0.209184 | 3_1:-80380983 | None:intergenic |
| TGATTATCAGCCATTTAAAT+TGG | 0.236867 | 3_1:+80383907 | Msa0379310:exon |
| GTTCACTGCTCCAATTTAAA+TGG | 0.260482 | 3_1:-80383917 | None:intergenic |
| GATTAATTTATGAAAAGATT+TGG | 0.285849 | 3_1:+80376316 | Msa0379310:five_prime_UTR |
| AGATATCATTTATAGGGTTT+TGG | 0.289713 | 3_1:+80376402 | Msa0379310:five_prime_UTR |
| GCGATTAGATATCATTTATA+GGG | 0.298881 | 3_1:+80376396 | Msa0379310:five_prime_UTR |
| AGCTGGTATGCGCGAGGTTT+TGG | 0.299009 | 3_1:+80381494 | Msa0379310:CDS |
| TACCATTTATGTTGAATGAT+TGG | 0.320995 | 3_1:+80380981 | Msa0379310:CDS |
| GTTGCACGAACTGGCCCTTT+TGG | 0.326824 | 3_1:+80381545 | Msa0379310:CDS |
| AGCGATTAGATATCATTTAT+AGG | 0.350520 | 3_1:+80376395 | Msa0379310:five_prime_UTR |
| GCTGATTGGGAGTGGCTAAC+CGG | 0.377557 | 3_1:-80383861 | None:intergenic |
| AATGGCTGATAATCACCTAT+TGG | 0.400439 | 3_1:-80383899 | None:intergenic |
| CGGGATTGCTGTCCTCCAAA+AGG | 0.402231 | 3_1:-80381560 | None:intergenic |
| GCAGTATAAGTTGCACGAAC+TGG | 0.409088 | 3_1:+80381536 | Msa0379310:CDS |
| GGAAATTTGACTTGGCTGAT+TGG | 0.409855 | 3_1:-80383875 | None:intergenic |
| GAAATTTGACTTGGCTGATT+GGG | 0.416073 | 3_1:-80383874 | None:intergenic |
| TTGCCGGTGAACTTGTGATT+AGG | 0.417014 | 3_1:-80381280 | None:intergenic |
| TTACATTGCTATCAGTCCCT+TGG | 0.440977 | 3_1:+80381339 | Msa0379310:CDS |
| CTGTGGTATTTCACATGAAC+TGG | 0.444183 | 3_1:+80376769 | Msa0379310:CDS |
| CGGATTCCTCACAACATTGC+CGG | 0.448860 | 3_1:-80381296 | None:intergenic |
| CAAGTCAAATTTCCACCAAT+AGG | 0.455503 | 3_1:+80383884 | Msa0379310:CDS |
| GGTATGTAAGAAGATATCTA+TGG | 0.458058 | 3_1:+80380925 | Msa0379310:intron |
| ACCATCTTCACCTGTGATAG+TGG | 0.459519 | 3_1:-80381242 | None:intergenic |
| TGGATTAAAACAAATATTGA+AGG | 0.472982 | 3_1:+80381001 | Msa0379310:CDS |
| CATAGATCATTATACTTGAA+AGG | 0.485878 | 3_1:-80380952 | None:intergenic |
| CTATTGGTGGAAATTTGACT+TGG | 0.486666 | 3_1:-80383883 | None:intergenic |
| GCCTGCTCTTGTTGTTCTTG+AGG | 0.487218 | 3_1:+80376830 | Msa0379310:CDS |
| TTCTCCAGCATGTGGGTTGG+TGG | 0.495902 | 3_1:+80381215 | Msa0379310:intron |
| CTGATTGGGAGTGGCTAACC+GGG | 0.497919 | 3_1:-80383860 | None:intergenic |
| TTCATTCAGAGTATTGTAGC+TGG | 0.502944 | 3_1:+80381477 | Msa0379310:intron |
| GGCTGATAATCACCTATTGG+TGG | 0.521784 | 3_1:-80383896 | None:intergenic |
| GGGATTGCTGTCCTCCAAAA+GGG | 0.523816 | 3_1:-80381559 | None:intergenic |
| TTGTGAGGAATCCGTCTCAT+TGG | 0.524908 | 3_1:+80381305 | Msa0379310:CDS |
| TTCTGTATTTGTCACTGCTG+TGG | 0.532878 | 3_1:+80376752 | Msa0379310:CDS |
| GCTTAGACTGTTCGACTCGC+AGG | 0.535534 | 3_1:+80376454 | Msa0379310:five_prime_UTR |
| TTGACTTGGCTGATTGGGAG+TGG | 0.537340 | 3_1:-80383869 | None:intergenic |
| TTCGACGCTGTTAAAACGAA+AGG | 0.539678 | 3_1:+80376425 | Msa0379310:five_prime_UTR |
| ACCACTATCACAGGTGAAGA+TGG | 0.540890 | 3_1:+80381241 | Msa0379310:CDS |
| GGCGAGGTTACTCCATGCGC+TGG | 0.546892 | 3_1:+80376790 | Msa0379310:CDS |
| TGAGGAGTACCTCAGTGTAA+AGG | 0.550190 | 3_1:+80383080 | Msa0379310:CDS |
| AAATTGACTGACAGATGGAT+AGG | 0.552124 | 3_1:+80376715 | Msa0379310:intron |
| ATTCCTAATCACAAGTTCAC+CGG | 0.554353 | 3_1:+80381277 | Msa0379310:CDS |
| GTGTTTGGTTTCAATTCTAG+AGG | 0.554473 | 3_1:+80384028 | Msa0379310:three_prime_UTR |
| ACCTCAAGAACAACAAGAGC+AGG | 0.555189 | 3_1:-80376831 | None:intergenic |
| AGAGCATAAAACAAAATCAC+GGG | 0.576450 | 3_1:-80383943 | None:intergenic |
| CTCTGATAGGGGAAGGACAA+GGG | 0.588846 | 3_1:+80383962 | Msa0379310:three_prime_UTR |
| TGACTGACAGATGGATAGGA+AGG | 0.593228 | 3_1:+80376719 | Msa0379310:intron |
| AACTTATACTGCTCCACATG+AGG | 0.603642 | 3_1:-80381525 | None:intergenic |
| CAGAGCATAAAACAAAATCA+CGG | 0.609310 | 3_1:-80383944 | None:intergenic |
| TGAAGTTTCTGGCAAAGTCG+AGG | 0.609380 | 3_1:+80381027 | Msa0379310:CDS |
| TTGTCAGTAATCATCAAGCC+CGG | 0.613234 | 3_1:+80383842 | Msa0379310:CDS |
| TGGTGGTTGACCACTATCAC+AGG | 0.613392 | 3_1:+80381232 | Msa0379310:CDS |
| AACACTGCAGCTAAAACGAA+AGG | 0.622852 | 3_1:+80376369 | Msa0379310:five_prime_UTR |
| CTCTTGATACGCCAATGAGA+CGG | 0.624002 | 3_1:-80381316 | None:intergenic |
| ACTATCACAGGTGAAGATGG+TGG | 0.624871 | 3_1:+80381244 | Msa0379310:CDS |
| GCTCTGATAGGGGAAGGACA+AGG | 0.628561 | 3_1:+80383961 | Msa0379310:three_prime_UTR |
| GTATTTCACATGAACTGGCG+AGG | 0.635437 | 3_1:+80376774 | Msa0379310:CDS |
| CTATCACAGGTGAAGATGGT+GGG | 0.637016 | 3_1:+80381245 | Msa0379310:CDS |
| AGTTCACCGGCAATGTTGTG+AGG | 0.651060 | 3_1:+80381290 | Msa0379310:CDS |
| TATTGTAGCTGGTATGCGCG+AGG | 0.657038 | 3_1:+80381488 | Msa0379310:CDS |
| TGCACATATACACCAGCGCA+TGG | 0.659296 | 3_1:-80376802 | None:intergenic |
| ATTAATTTACCTTTACACTG+AGG | 0.690812 | 3_1:-80383089 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTTAATAAAATGATAT+AGG | + | chr3_1:80376967-80376986 | Msa0379310:intron | 10.0% |
| !!! | ATTAAGAAAAAAATAGATTT+TGG | - | chr3_1:80377152-80377171 | None:intergenic | 10.0% |
| !! | AAAAAAAAGTAAAAATTGTT+TGG | + | chr3_1:80377577-80377596 | Msa0379310:intron | 10.0% |
| !! | AAAAAAAAATAAAAAATGGA+AGG | - | chr3_1:80380645-80380664 | None:intergenic | 10.0% |
| !! | ATGCAAAAAAAAATAAAAAA+TGG | - | chr3_1:80380649-80380668 | None:intergenic | 10.0% |
| !!! | AAAAAAGTTCTTTTTTTATT+AGG | + | chr3_1:80380673-80380692 | Msa0379310:intron | 10.0% |
| !!! | TATATATAAAAGTTACTTTA+AGG | - | chr3_1:80381063-80381082 | None:intergenic | 10.0% |
| !! | TGATCATAATTATAATTATT+TGG | + | chr3_1:80383409-80383428 | Msa0379310:intron | 10.0% |
| !!! | TTTTCTGATAAATATAATTA+AGG | + | chr3_1:80383767-80383786 | Msa0379310:intron | 10.0% |
| !! | GATTAATTTATGAAAAGATT+TGG | + | chr3_1:80376316-80376335 | Msa0379310:five_prime_UTR | 15.0% |
| !!! | ATTTGAAATTAAAATTAGGA+TGG | + | chr3_1:80376600-80376619 | Msa0379310:intron | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | - | chr3_1:80377092-80377111 | None:intergenic | 15.0% |
| !!! | ATTACTATAAATTTTGCTAT+AGG | + | chr3_1:80377392-80377411 | Msa0379310:intron | 15.0% |
| !!! | TATTACGTTTTATTGTATTT+TGG | - | chr3_1:80378417-80378436 | None:intergenic | 15.0% |
| !! | ATTGAAATTAACAATTCTAT+TGG | - | chr3_1:80378768-80378787 | None:intergenic | 15.0% |
| !! | GAAGAAAATATATATAAGTA+TGG | + | chr3_1:80380434-80380453 | Msa0379310:intron | 15.0% |
| !! | TAGAAAAATCATATAAAATG+TGG | + | chr3_1:80380534-80380553 | Msa0379310:intron | 15.0% |
| !! | GTAAACATAAGTATTAAAAA+GGG | - | chr3_1:80380874-80380893 | None:intergenic | 15.0% |
| !! | AGTAAACATAAGTATTAAAA+AGG | - | chr3_1:80380875-80380894 | None:intergenic | 15.0% |
| !!! | TTAATCTTTAAGTTTCAAAT+AGG | + | chr3_1:80381819-80381838 | Msa0379310:intron | 15.0% |
| !! | GACATAGTTTATTAATTAAA+AGG | + | chr3_1:80382206-80382225 | Msa0379310:intron | 15.0% |
| !! | ATTAGAATTAAATAATATGC+TGG | - | chr3_1:80383307-80383326 | None:intergenic | 15.0% |
| !! | TTAGATTGCATTGAAAAAAT+AGG | - | chr3_1:80376531-80376550 | None:intergenic | 20.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | - | chr3_1:80376994-80377013 | None:intergenic | 20.0% |
| !!! | TCTATTTTTTTCTTAATGCA+AGG | + | chr3_1:80377155-80377174 | Msa0379310:intron | 20.0% |
| !! | AAAGTTCGTTTAAATGATAA+TGG | - | chr3_1:80377451-80377470 | None:intergenic | 20.0% |
| !!! | TTTGTTTGAAAAGTAACTTT+TGG | - | chr3_1:80377535-80377554 | None:intergenic | 20.0% |
| !!! | TTTTTAAGCTAAAAGTTGTT+TGG | + | chr3_1:80377630-80377649 | Msa0379310:intron | 20.0% |
| !! | TTAATATGGATGAAGAAAAT+GGG | - | chr3_1:80377953-80377972 | None:intergenic | 20.0% |
| !! | ATTAATATGGATGAAGAAAA+TGG | - | chr3_1:80377954-80377973 | None:intergenic | 20.0% |
| !!! | TGTTGTTTAATTAGTGAAAA+TGG | + | chr3_1:80378087-80378106 | Msa0379310:intron | 20.0% |
| !! | TCTAGAAAATTACTAAGATT+TGG | + | chr3_1:80378449-80378468 | Msa0379310:intron | 20.0% |
| !! | GAATTGTTAATTTCAATAGT+TGG | + | chr3_1:80378771-80378790 | Msa0379310:intron | 20.0% |
| !!! | TAAGTTTGGAATTCAAAATA+TGG | - | chr3_1:80379090-80379109 | None:intergenic | 20.0% |
| !! | AAAATATCAGAAAGACTATA+TGG | - | chr3_1:80379143-80379162 | None:intergenic | 20.0% |
| !! | AAGAAACTATGTAGATTTAT+TGG | - | chr3_1:80379179-80379198 | None:intergenic | 20.0% |
| !! | ACATGTAAAAATGAACAAAA+CGG | + | chr3_1:80380218-80380237 | Msa0379310:intron | 20.0% |
| !! | ATAACAAGTGATATGAAATT+TGG | + | chr3_1:80380266-80380285 | Msa0379310:intron | 20.0% |
| !!! | AGCTTAATTTAAAATGTGTT+TGG | + | chr3_1:80380696-80380715 | Msa0379310:intron | 20.0% |
| !! | TGGATTAAAACAAATATTGA+AGG | + | chr3_1:80381001-80381020 | Msa0379310:CDS | 20.0% |
| !! | TTATATATAGAGTATAGTGT+AGG | + | chr3_1:80381074-80381093 | Msa0379310:intron | 20.0% |
| !!! | TTTTTATTTTCTTAAATGGG+TGG | + | chr3_1:80381108-80381127 | Msa0379310:intron | 20.0% |
| !! | AGATCTATTATTACTTTCAA+TGG | + | chr3_1:80381161-80381180 | Msa0379310:intron | 20.0% |
| !! | GATCTATTATTACTTTCAAT+GGG | + | chr3_1:80381162-80381181 | Msa0379310:intron | 20.0% |
| !!! | TCAATTTTGTTAAAATCCAA+GGG | - | chr3_1:80381358-80381377 | None:intergenic | 20.0% |
| !! | TGAAACTTAAAGATTAACTT+GGG | - | chr3_1:80381816-80381835 | None:intergenic | 20.0% |
| !! | TTGAAACTTAAAGATTAACT+TGG | - | chr3_1:80381817-80381836 | None:intergenic | 20.0% |
| !! | ATTAATTATTAACTTACAGC+AGG | + | chr3_1:80382174-80382193 | Msa0379310:intron | 20.0% |
| !! | TTAATTATTAACTTACAGCA+GGG | + | chr3_1:80382175-80382194 | Msa0379310:intron | 20.0% |
| !! | TTTAAAAACTATGGTGTATT+GGG | + | chr3_1:80382479-80382498 | Msa0379310:intron | 20.0% |
| !! | AGTAGTTTATTTAAATTCTC+TGG | - | chr3_1:80382853-80382872 | None:intergenic | 20.0% |
| !!! | AATTTTCCATATCTTACTAA+TGG | + | chr3_1:80383007-80383026 | Msa0379310:intron | 20.0% |
| !! | TATCAATATCTACAATCAAA+AGG | - | chr3_1:80383034-80383053 | None:intergenic | 20.0% |
| !!! | ATTGATTCATTCAATAAATG+TGG | - | chr3_1:80383169-80383188 | None:intergenic | 20.0% |
| !! | AATAATAGAAACACTTTGTA+TGG | + | chr3_1:80383324-80383343 | Msa0379310:intron | 20.0% |
| !!! | CTGTTTTTTTACATTTGTAA+AGG | - | chr3_1:80383384-80383403 | None:intergenic | 20.0% |
| !!! | TGAAAAAAGTGTTTTACTTA+CGG | + | chr3_1:80383473-80383492 | Msa0379310:intron | 20.0% |
| !! | TAAGCATGCAAAAAAAAAAA+AGG | + | chr3_1:80383526-80383545 | Msa0379310:intron | 20.0% |
| !! | AAGGAATTTATTACCATAAA+AGG | + | chr3_1:80383545-80383564 | Msa0379310:intron | 20.0% |
| !!! | AAACTTTGTTGACTTATTTA+TGG | + | chr3_1:80383568-80383587 | Msa0379310:intron | 20.0% |
| !! | TTTATCACTTCATAAGTAAA+CGG | - | chr3_1:80383683-80383702 | None:intergenic | 20.0% |
| ! | AGCGATTAGATATCATTTAT+AGG | + | chr3_1:80376395-80376414 | Msa0379310:five_prime_UTR | 25.0% |
| ! | GCGATTAGATATCATTTATA+GGG | + | chr3_1:80376396-80376415 | Msa0379310:five_prime_UTR | 25.0% |
| !! | AGATATCATTTATAGGGTTT+TGG | + | chr3_1:80376402-80376421 | Msa0379310:five_prime_UTR | 25.0% |
| ! | AAACAATTTGTAATCATGTG+CGG | - | chr3_1:80376494-80376513 | None:intergenic | 25.0% |
| ! | TCTTTCGTTAATCTGTTTAT+CGG | + | chr3_1:80376676-80376695 | Msa0379310:intron | 25.0% |
| ! | TAACCAATAATCACATGTTT+CGG | + | chr3_1:80377315-80377334 | Msa0379310:intron | 25.0% |
| ! | TAAAGAGTTAGAAATCAAGT+AGG | - | chr3_1:80377896-80377915 | None:intergenic | 25.0% |
| ! | TTAAAGAAATAACAAACCAG+TGG | + | chr3_1:80378390-80378409 | Msa0379310:intron | 25.0% |
| ! | TAAAGAAATAACAAACCAGT+GGG | + | chr3_1:80378391-80378410 | Msa0379310:intron | 25.0% |
| !! | CTTAGGTTTTCAAAATTGTT+AGG | - | chr3_1:80378689-80378708 | None:intergenic | 25.0% |
| ! | TTAACAATTCTATTGGTACT+TGG | - | chr3_1:80378761-80378780 | None:intergenic | 25.0% |
| !!! | ATTTACATAGCTTTATGTTC+TGG | - | chr3_1:80378834-80378853 | None:intergenic | 25.0% |
| !!! | AATTATTTTGTGCAAAGCTT+TGG | - | chr3_1:80378871-80378890 | None:intergenic | 25.0% |
| ! | CTTTGCACAAAATAATTGTT+GGG | + | chr3_1:80378874-80378893 | Msa0379310:intron | 25.0% |
| ! | CAAACATACTTGAAAAATCA+TGG | + | chr3_1:80378931-80378950 | Msa0379310:intron | 25.0% |
| !!! | TGTATTCATTTCTAGCATAA+TGG | - | chr3_1:80379015-80379034 | None:intergenic | 25.0% |
| !!! | GGTAATAGGTTTTATAAGTT+TGG | - | chr3_1:80379104-80379123 | None:intergenic | 25.0% |
| ! | CATTTAAGGATAAGATTGAA+AGG | - | chr3_1:80379240-80379259 | None:intergenic | 25.0% |
| ! | AGGATTAGATAAACTCATAA+TGG | - | chr3_1:80379284-80379303 | None:intergenic | 25.0% |
| ! | TTTGATTACAAAAGCTTATC+AGG | - | chr3_1:80379319-80379338 | None:intergenic | 25.0% |
| ! | TACTATAATGTTTGGAAAGA+GGG | - | chr3_1:80379380-80379399 | None:intergenic | 25.0% |
| ! | TTTGATTACAAAAGCTTATC+AGG | - | chr3_1:80379319-80379338 | None:intergenic | 25.0% |
| ! | TACTATAATGTTTGGAAAGA+GGG | - | chr3_1:80379380-80379399 | None:intergenic | 25.0% |
| ! | GTTTGACATATGGATAATAT+GGG | + | chr3_1:80379779-80379798 | Msa0379310:intron | 25.0% |
| !!! | TAAAAAAAAGGCATCTGATA+TGG | + | chr3_1:80380361-80380380 | Msa0379310:intron | 25.0% |
| ! | AAGTATGGTTATATAGCATT+TGG | + | chr3_1:80380449-80380468 | Msa0379310:intron | 25.0% |
| !! | GGAATCCTCTAAAAAAAATT+GGG | + | chr3_1:80380474-80380493 | Msa0379310:intron | 25.0% |
| !!! | TGAAACCCAATTTTTTTTAG+AGG | - | chr3_1:80380482-80380501 | None:intergenic | 25.0% |
| ! | CTAAAAAAAATTGGGTTTCA+CGG | + | chr3_1:80380482-80380501 | Msa0379310:intron | 25.0% |
| ! | TTACTTTGTAATAGCTTACA+CGG | - | chr3_1:80380597-80380616 | None:intergenic | 25.0% |
| ! | CATAGATCATTATACTTGAA+AGG | - | chr3_1:80380955-80380974 | None:intergenic | 25.0% |
| ! | TACCATTTATGTTGAATGAT+TGG | + | chr3_1:80380981-80381000 | Msa0379310:CDS | 25.0% |
| ! | ATCCAATCATTCAACATAAA+TGG | - | chr3_1:80380986-80381005 | None:intergenic | 25.0% |
| !!! | TTTTATTTGTCACATGATTG+TGG | - | chr3_1:80381142-80381161 | None:intergenic | 25.0% |
| !! | GTCAATTTTGTTAAAATCCA+AGG | - | chr3_1:80381359-80381378 | None:intergenic | 25.0% |
| !!! | TCATTTTTTAATGTGTAAGC+TGG | + | chr3_1:80381433-80381452 | Msa0379310:intron | 25.0% |
| !! | TAACAAATGTGACATTTTCT+TGG | + | chr3_1:80381653-80381672 | Msa0379310:intron | 25.0% |
| ! | TTGAAACTTTCGAAACTTAA+AGG | - | chr3_1:80381781-80381800 | None:intergenic | 25.0% |
| ! | AAGTTTCGAAAGTTTCAATT+AGG | + | chr3_1:80381783-80381802 | Msa0379310:intron | 25.0% |
| !! | TTAAAGATTAACTTGGGAAA+AGG | - | chr3_1:80381810-80381829 | None:intergenic | 25.0% |
| ! | GATCAAAATCAACAACTTAA+CGG | - | chr3_1:80381911-80381930 | None:intergenic | 25.0% |
| ! | TAATTATTAACTTACAGCAG+GGG | + | chr3_1:80382176-80382195 | Msa0379310:intron | 25.0% |
| !! | AGGATCTATTTGAAACTTAA+AGG | + | chr3_1:80382226-80382245 | Msa0379310:intron | 25.0% |
| ! | TAAATGAGTTAAGGAGTTAA+AGG | - | chr3_1:80382336-80382355 | None:intergenic | 25.0% |
| !!! | TTAGTGGATTAAATGAGTTA+AGG | - | chr3_1:80382345-80382364 | None:intergenic | 25.0% |
| !! | AGTCAAATGATAAGTGTTTT+CGG | + | chr3_1:80382393-80382412 | Msa0379310:intron | 25.0% |
| ! | ATGAATTGTAAGTAAGACTA+AGG | + | chr3_1:80382424-80382443 | Msa0379310:intron | 25.0% |
| !! | CTTTAAAAACTATGGTGTAT+TGG | + | chr3_1:80382478-80382497 | Msa0379310:intron | 25.0% |
| !!! | AAGCTTAATGTTTTAATGAG+CGG | + | chr3_1:80382524-80382543 | Msa0379310:intron | 25.0% |
| ! | GATACATTAGACAAAAAGAT+GGG | + | chr3_1:80382575-80382594 | Msa0379310:intron | 25.0% |
| ! | ATACATTAGACAAAAAGATG+GGG | + | chr3_1:80382576-80382595 | Msa0379310:intron | 25.0% |
| !!! | TTTATGTGATTTGTTTTGTG+TGG | + | chr3_1:80382634-80382653 | Msa0379310:intron | 25.0% |
| ! | TTGTTAAATAGTGCTTATAG+TGG | + | chr3_1:80382749-80382768 | Msa0379310:intron | 25.0% |
| ! | ATTAATTTACCTTTACACTG+AGG | - | chr3_1:80383092-80383111 | None:intergenic | 25.0% |
| ! | GAATCAATGAATCTAAAAAG+TGG | + | chr3_1:80383181-80383200 | Msa0379310:intron | 25.0% |
| ! | TATTTGGTATCTTGATTTCT+TGG | + | chr3_1:80383425-80383444 | Msa0379310:intron | 25.0% |
| !!! | GAAAAAAGTGTTTTACTTAC+GGG | + | chr3_1:80383474-80383493 | Msa0379310:intron | 25.0% |
| !!! | TTTTTTTTTGCATGCTTAAC+CGG | - | chr3_1:80383524-80383543 | None:intergenic | 25.0% |
| ! | AAGTGATAAATTCAGATGTA+TGG | + | chr3_1:80383693-80383712 | Msa0379310:intron | 25.0% |
| ! | ATTCACATGTGTAATAAAAC+AGG | + | chr3_1:80383792-80383811 | Msa0379310:intron | 25.0% |
| !!! | AAAACAGGATGCAATTTTTT+TGG | + | chr3_1:80383807-80383826 | Msa0379310:intron | 25.0% |
| ! | TGATTATCAGCCATTTAAAT+TGG | + | chr3_1:80383907-80383926 | Msa0379310:exon | 25.0% |
| !!! | ATTTTGTTTTATGCTCTGAT+AGG | + | chr3_1:80383949-80383968 | Msa0379310:three_prime_UTR | 25.0% |
| !!! | TTTTGTTTTATGCTCTGATA+GGG | + | chr3_1:80383950-80383969 | Msa0379310:three_prime_UTR | 25.0% |
| !!! | TTTTGACTTAATCATGTGTT+TGG | + | chr3_1:80384013-80384032 | Msa0379310:three_prime_UTR | 25.0% |
| TTGTCAATCGAATCAATACT+TGG | + | chr3_1:80376554-80376573 | Msa0379310:intron | 30.0% | |
| ACAAAATGCAATGAATATGG+GGG | - | chr3_1:80376910-80376929 | None:intergenic | 30.0% | |
| CACAAAATGCAATGAATATG+GGG | - | chr3_1:80376911-80376930 | None:intergenic | 30.0% | |
| CCACAAAATGCAATGAATAT+GGG | - | chr3_1:80376912-80376931 | None:intergenic | 30.0% | |
| TCCACAAAATGCAATGAATA+TGG | - | chr3_1:80376913-80376932 | None:intergenic | 30.0% | |
| TAAAAAAAACCAGGACAAAC+GGG | - | chr3_1:80377508-80377527 | None:intergenic | 30.0% | |
| GTAAAAAAAACCAGGACAAA+CGG | - | chr3_1:80377509-80377528 | None:intergenic | 30.0% | |
| !!! | GTTTGTCCTGGTTTTTTTTA+CGG | + | chr3_1:80377508-80377527 | Msa0379310:intron | 30.0% |
| ! | AATATGTGGTGTTGAAAACA+AGG | - | chr3_1:80378030-80378049 | None:intergenic | 30.0% |
| CGTAACTATATTCGAATATG+TGG | - | chr3_1:80378044-80378063 | None:intergenic | 30.0% | |
| ! | AGATTTTCTCTCAATTATGG+TGG | - | chr3_1:80378309-80378328 | None:intergenic | 30.0% |
| ! | TCGAGATTTTCTCTCAATTA+TGG | - | chr3_1:80378312-80378331 | None:intergenic | 30.0% |
| TTTATCAGAATGAGAACTTG+GGG | - | chr3_1:80378548-80378567 | None:intergenic | 30.0% | |
| CTTTATCAGAATGAGAACTT+GGG | - | chr3_1:80378549-80378568 | None:intergenic | 30.0% | |
| TCTTTATCAGAATGAGAACT+TGG | - | chr3_1:80378550-80378569 | None:intergenic | 30.0% | |
| GCTTTGCACAAAATAATTGT+TGG | + | chr3_1:80378873-80378892 | Msa0379310:intron | 30.0% | |
| ATGTTTGACATGTGTGAAAT+TGG | - | chr3_1:80378918-80378937 | None:intergenic | 30.0% | |
| CTATGACTAACAAGAATGTA+TGG | + | chr3_1:80379035-80379054 | Msa0379310:intron | 30.0% | |
| ATCTTATCCTTAAATGCCTT+CGG | + | chr3_1:80379244-80379263 | Msa0379310:intron | 30.0% | |
| ATTACAAAAGCTTATCAGGA+AGG | - | chr3_1:80379315-80379334 | None:intergenic | 30.0% | |
| GTACTATAATGTTTGGAAAG+AGG | - | chr3_1:80379381-80379400 | None:intergenic | 30.0% | |
| ACTGTCAGTACTATAATGTT+TGG | - | chr3_1:80379388-80379407 | None:intergenic | 30.0% | |
| CATGTAGCAATTCAATAGTA+AGG | + | chr3_1:80379466-80379485 | Msa0379310:intron | 30.0% | |
| GTACTATAATGTTTGGAAAG+AGG | - | chr3_1:80379381-80379400 | None:intergenic | 30.0% | |
| ACTGTCAGTACTATAATGTT+TGG | - | chr3_1:80379388-80379407 | None:intergenic | 30.0% | |
| GGTTTGACATATGGATAATA+TGG | + | chr3_1:80379778-80379797 | Msa0379310:intron | 30.0% | |
| TAATATGGGTATGATGAAAG+TGG | + | chr3_1:80379793-80379812 | Msa0379310:intron | 30.0% | |
| ! | TGACGTTGTTGATGAAATAA+AGG | - | chr3_1:80380046-80380065 | None:intergenic | 30.0% |
| ! | ATAAGTAAGGATCTTTGAGA+TGG | - | chr3_1:80380117-80380136 | None:intergenic | 30.0% |
| CATATATTATCCTACTGATG+AGG | - | chr3_1:80380154-80380173 | None:intergenic | 30.0% | |
| CTCATCAGTAGGATAATATA+TGG | + | chr3_1:80380152-80380171 | Msa0379310:intron | 30.0% | |
| ! | TGCTGTTTATGTAGTATATC+AGG | - | chr3_1:80380199-80380218 | None:intergenic | 30.0% |
| TATGGTTATATAGCATTTGG+CGG | + | chr3_1:80380452-80380471 | Msa0379310:intron | 30.0% | |
| ! | GGGAATCCTCTAAAAAAAAT+TGG | + | chr3_1:80380473-80380492 | Msa0379310:intron | 30.0% |
| TCATATAAAATGTGGCTTGA+AGG | + | chr3_1:80380542-80380561 | Msa0379310:intron | 30.0% | |
| !! | TCTCTACACTTTTAAGAAGA+AGG | - | chr3_1:80380726-80380745 | None:intergenic | 30.0% |
| AGAGAAGTAGAAAAAAAGTC+AGG | + | chr3_1:80380741-80380760 | Msa0379310:intron | 30.0% | |
| AGATATCTTCTTACATACCT+GGG | - | chr3_1:80380924-80380943 | None:intergenic | 30.0% | |
| TAGATATCTTCTTACATACC+TGG | - | chr3_1:80380925-80380944 | None:intergenic | 30.0% | |
| GGTATGTAAGAAGATATCTA+TGG | + | chr3_1:80380925-80380944 | Msa0379310:intron | 30.0% | |
| ATTGAAGGATATGAAGTTTC+TGG | + | chr3_1:80381016-80381035 | Msa0379310:CDS | 30.0% | |
| ATATAGAGTATAGTGTAGGT+AGG | + | chr3_1:80381078-80381097 | Msa0379310:intron | 30.0% | |
| TCTGAATGAAGAAAACAGAA+TGG | - | chr3_1:80381467-80381486 | None:intergenic | 30.0% | |
| GAAACTTAAAGGACTAACTT+GGG | - | chr3_1:80382237-80382256 | None:intergenic | 30.0% | |
| TGGTCACAAATGATCATTTA+TGG | + | chr3_1:80381979-80381998 | Msa0379310:intron | 30.0% | |
| TGTCAAAACGTTACGTTTAA+TGG | - | chr3_1:80382089-80382108 | None:intergenic | 30.0% | |
| !! | GATGCCTTTTAAAAGTTTCA+GGG | - | chr3_1:80382112-80382131 | None:intergenic | 30.0% |
| GATCCAAATCAACAACTTAA+CGG | + | chr3_1:80382137-80382156 | Msa0379310:intron | 30.0% | |
| GAGAATTCTGTCAAACTAAA+AGG | + | chr3_1:80382257-80382276 | Msa0379310:intron | 30.0% | |
| AAAGGACCAAATGTGATATT+TGG | + | chr3_1:80382275-80382294 | Msa0379310:intron | 30.0% | |
| AATAGGCCAAATATCACATT+TGG | - | chr3_1:80382284-80382303 | None:intergenic | 30.0% | |
| !! | ACACTTATCATTTGACTTGA+GGG | - | chr3_1:80382390-80382409 | None:intergenic | 30.0% |
| !! | AACACTTATCATTTGACTTG+AGG | - | chr3_1:80382391-80382410 | None:intergenic | 30.0% |
| TAAGTAAGACTAAGGCATAA+TGG | + | chr3_1:80382432-80382451 | Msa0379310:intron | 30.0% | |
| AAGTAAGACTAAGGCATAAT+GGG | + | chr3_1:80382433-80382452 | Msa0379310:intron | 30.0% | |
| CACTAACATAAGATAGGATT+AGG | + | chr3_1:80382548-80382567 | Msa0379310:intron | 30.0% | |
| ACATAAGATAGGATTAGGAT+TGG | + | chr3_1:80382553-80382572 | Msa0379310:intron | 30.0% | |
| GGATACATTAGACAAAAAGA+TGG | + | chr3_1:80382574-80382593 | Msa0379310:intron | 30.0% | |
| GACTTGTATAAAGTGCAATA+AGG | + | chr3_1:80382661-80382680 | Msa0379310:intron | 30.0% | |
| ! | AGGAGAGTATATCAAATAGA+TGG | + | chr3_1:80382681-80382700 | Msa0379310:intron | 30.0% |
| TAAAGCAATATTGTCAATCG+CGG | - | chr3_1:80382888-80382907 | None:intergenic | 30.0% | |
| !! | AGACATTTTTGTTTGATCCA+TGG | + | chr3_1:80382921-80382940 | Msa0379310:intron | 30.0% |
| AAAGGACCATTAGTAAGATA+TGG | - | chr3_1:80383016-80383035 | None:intergenic | 30.0% | |
| ! | TGTGAAAACTTCACATTTTG+AGG | + | chr3_1:80383062-80383081 | Msa0379310:CDS | 30.0% |
| GGTAAATTAATAGAAACCCA+AGG | + | chr3_1:80383101-80383120 | Msa0379310:intron | 30.0% | |
| TAAGAAATTGCAATTGCCTT+GGG | - | chr3_1:80383120-80383139 | None:intergenic | 30.0% | |
| ATAAGAAATTGCAATTGCCT+TGG | - | chr3_1:80383121-80383140 | None:intergenic | 30.0% | |
| AAGGCAATTGCAATTTCTTA+TGG | + | chr3_1:80383120-80383139 | Msa0379310:intron | 30.0% | |
| TTCATTCAATAAATGTGGTG+TGG | - | chr3_1:80383164-80383183 | None:intergenic | 30.0% | |
| ! | GTCAACAAAGTTTCCTTTTA+TGG | - | chr3_1:80383561-80383580 | None:intergenic | 30.0% |
| AGAGCATAAAACAAAATCAC+GGG | - | chr3_1:80383946-80383965 | None:intergenic | 30.0% | |
| CAGAGCATAAAACAAAATCA+CGG | - | chr3_1:80383947-80383966 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTATGCTCTGATAG+GGG | + | chr3_1:80383951-80383970 | Msa0379310:three_prime_UTR | 30.0% |
| !! | TTTTAGCTGCAGTGTTTTTG+TGG | - | chr3_1:80376365-80376384 | None:intergenic | 35.0% |
| AAGAGAAATTGACTGACAGA+TGG | + | chr3_1:80376710-80376729 | Msa0379310:intron | 35.0% | |
| AAATTGACTGACAGATGGAT+AGG | + | chr3_1:80376715-80376734 | Msa0379310:intron | 35.0% | |
| AGACAGTGCAAAAGAAAGAA+TGG | - | chr3_1:80376860-80376879 | None:intergenic | 35.0% | |
| ! | CCCATATTCATTGCATTTTG+TGG | + | chr3_1:80376909-80376928 | Msa0379310:intron | 35.0% |
| CAATAATCACATGTTTCGGT+CGG | + | chr3_1:80377319-80377338 | Msa0379310:intron | 35.0% | |
| ! | CTTCTAGGCTTGTTTATTGT+CGG | + | chr3_1:80377422-80377441 | Msa0379310:intron | 35.0% |
| AAAAAAAACCAGGACAAACG+GGG | - | chr3_1:80377507-80377526 | None:intergenic | 35.0% | |
| TTTGGACCGTAAAAAAAACC+AGG | - | chr3_1:80377517-80377536 | None:intergenic | 35.0% | |
| AATCCAATAACAGTGCAAGA+TGG | - | chr3_1:80377923-80377942 | None:intergenic | 35.0% | |
| GCGCGAAGAAGAAATTAATA+TGG | - | chr3_1:80377967-80377986 | None:intergenic | 35.0% | |
| GATAAATGTGATGCTATCTC+TGG | - | chr3_1:80378002-80378021 | None:intergenic | 35.0% | |
| TATCACATAAGATGTGTGCA+TGG | + | chr3_1:80378115-80378134 | Msa0379310:intron | 35.0% | |
| !! | TGACTTCCATCTCTAAAATC+AGG | + | chr3_1:80378165-80378184 | Msa0379310:intron | 35.0% |
| AACCTAAAAGATCAAGAGAC+AGG | + | chr3_1:80378244-80378263 | Msa0379310:intron | 35.0% | |
| ! | AACCTGTCTCTTGATCTTTT+AGG | - | chr3_1:80378249-80378268 | None:intergenic | 35.0% |
| AGCGACAAACCTATCAAATA+AGG | + | chr3_1:80378272-80378291 | Msa0379310:intron | 35.0% | |
| GCGACAAACCTATCAAATAA+GGG | + | chr3_1:80378273-80378292 | Msa0379310:intron | 35.0% | |
| ACCTATCAAATAAGGGTTTC+CGG | + | chr3_1:80378280-80378299 | Msa0379310:intron | 35.0% | |
| !! | AATCAAAAAGTGTCCCTCTT+AGG | + | chr3_1:80378344-80378363 | Msa0379310:intron | 35.0% |
| AGAACTTATGTAGCCTAAGA+GGG | - | chr3_1:80378360-80378379 | None:intergenic | 35.0% | |
| !!! | TTTATTGTATTTTGGCCCAC+TGG | - | chr3_1:80378409-80378428 | None:intergenic | 35.0% |
| GCAATTACATACCACTCAAT+GGG | - | chr3_1:80378625-80378644 | None:intergenic | 35.0% | |
| AGCAATTACATACCACTCAA+TGG | - | chr3_1:80378626-80378645 | None:intergenic | 35.0% | |
| GTATGTAATTGCTTGACAGT+TGG | + | chr3_1:80378633-80378652 | Msa0379310:intron | 35.0% | |
| AGTTGATTGGCATATAGCTT+AGG | - | chr3_1:80378706-80378725 | None:intergenic | 35.0% | |
| ATGACAATCATGCAGTTGAT+TGG | - | chr3_1:80378719-80378738 | None:intergenic | 35.0% | |
| !!! | TTCCACCAAATTTTGACTCT+TGG | - | chr3_1:80378797-80378816 | None:intergenic | 35.0% |
| TCTAGCATAATGGTTCATGA+TGG | - | chr3_1:80379005-80379024 | None:intergenic | 35.0% | |
| ! | AGAGCTTTGTCATTGGTAAT+AGG | - | chr3_1:80379118-80379137 | None:intergenic | 35.0% |
| TAGCTACTGAAGTACAACAT+CGG | - | chr3_1:80379216-80379235 | None:intergenic | 35.0% | |
| TTATCAGGAAGGCTAGAAAT+AGG | - | chr3_1:80379304-80379323 | None:intergenic | 35.0% | |
| ACTTCATGTGTCCTTACTAT+TGG | - | chr3_1:80379436-80379455 | None:intergenic | 35.0% | |
| AAGTGTGATAAAGTTGAAGG+AGG | - | chr3_1:80379581-80379600 | None:intergenic | 35.0% | |
| ! | GGAAAGTGTGATAAAGTTGA+AGG | - | chr3_1:80379584-80379603 | None:intergenic | 35.0% |
| ACTTCATGTGTCCTTACTAT+TGG | - | chr3_1:80379436-80379455 | None:intergenic | 35.0% | |
| !!! | TGAAGATTTGGTGGTTTTAC+CGG | + | chr3_1:80379748-80379767 | Msa0379310:intron | 35.0% |
| ! | ACTGCCATAGTTTCAGTTTT+CGG | + | chr3_1:80379838-80379857 | Msa0379310:intron | 35.0% |
| TGCTGATATGGAAAAGAAGA+AGG | - | chr3_1:80380076-80380095 | None:intergenic | 35.0% | |
| ATTATCGCATGATGCTGATA+TGG | - | chr3_1:80380088-80380107 | None:intergenic | 35.0% | |
| ATGGTTATATAGCATTTGGC+GGG | + | chr3_1:80380453-80380472 | Msa0379310:intron | 35.0% | |
| TTACACGGAAGCTTAATTCT+AGG | - | chr3_1:80380582-80380601 | None:intergenic | 35.0% | |
| !! | TACACTTTTAAGAAGAAGGC+AGG | - | chr3_1:80380722-80380741 | None:intergenic | 35.0% |
| TCTCGTGTAAAAACAAGGTA+AGG | + | chr3_1:80380773-80380792 | Msa0379310:intron | 35.0% | |
| CTGCATACAATACACCAAAA+TGG | + | chr3_1:80380796-80380815 | Msa0379310:intron | 35.0% | |
| TACAATACACCAAAATGGTG+CGG | + | chr3_1:80380801-80380820 | Msa0379310:intron | 35.0% | |
| AAGTATTAAAAAGGGCAGTC+TGG | - | chr3_1:80380866-80380885 | None:intergenic | 35.0% | |
| AATTCATGCGTAATTAACCC+AGG | + | chr3_1:80380904-80380923 | Msa0379310:intron | 35.0% | |
| ! | ATTTTCTTAAATGGGTGGTC+TGG | + | chr3_1:80381113-80381132 | Msa0379310:intron | 35.0% |
| ! | TAATGTTTTCTCCAGCATGT+GGG | + | chr3_1:80381208-80381227 | Msa0379310:intron | 35.0% |
| ATTCCTAATCACAAGTTCAC+CGG | + | chr3_1:80381277-80381296 | Msa0379310:CDS | 35.0% | |
| GCATCTTAAACTGCTTGAAT+AGG | - | chr3_1:80381413-80381432 | None:intergenic | 35.0% | |
| !! | TTCATTCAGAGTATTGTAGC+TGG | + | chr3_1:80381477-80381496 | Msa0379310:intron | 35.0% |
| TTTGGCTAAAAATCCTCATG+TGG | + | chr3_1:80381512-80381531 | Msa0379310:CDS | 35.0% | |
| !!! | TACTTTTAGAGCTTGGTCTT+CGG | - | chr3_1:80381583-80381602 | None:intergenic | 35.0% |
| !!! | CGACATTTACTTTTAGAGCT+TGG | - | chr3_1:80381590-80381609 | None:intergenic | 35.0% |
| GATCTATTGCACGTAATGAT+GGG | + | chr3_1:80381675-80381694 | Msa0379310:intron | 35.0% | |
| ATACTCTCATTTGACTCACT+CGG | - | chr3_1:80381724-80381743 | None:intergenic | 35.0% | |
| CGAAACTTAAAGGACTAACT+TGG | - | chr3_1:80381771-80381790 | None:intergenic | 35.0% | |
| TTAAACAGATACTGACAGCA+GGG | - | chr3_1:80381878-80381897 | None:intergenic | 35.0% | |
| TGTCCAAACGCTATGTTTAA+TGG | + | chr3_1:80381959-80381978 | Msa0379310:intron | 35.0% | |
| TGACCATTAAACATAGCGTT+TGG | - | chr3_1:80381965-80381984 | None:intergenic | 35.0% | |
| ! | GACACCCTGAAACTTTTAAA+AGG | + | chr3_1:80382105-80382124 | Msa0379310:intron | 35.0% |
| !! | CGATGCCTTTTAAAAGTTTC+AGG | - | chr3_1:80382113-80382132 | None:intergenic | 35.0% |
| ! | TAGCCGTTAAGTTGTTGATT+TGG | - | chr3_1:80381905-80381924 | None:intergenic | 35.0% |
| AACTTAGCAAGGGAGAAAAT+AGG | - | chr3_1:80382301-80382320 | None:intergenic | 35.0% | |
| GTTAAGGAGTTAAAGGTCTA+GGG | - | chr3_1:80382329-80382348 | None:intergenic | 35.0% | |
| AGTTAAGGAGTTAAAGGTCT+AGG | - | chr3_1:80382330-80382349 | None:intergenic | 35.0% | |
| !! | TATCATTTGACTTGAGGGAT+GGG | - | chr3_1:80382385-80382404 | None:intergenic | 35.0% |
| !! | TTATCATTTGACTTGAGGGA+TGG | - | chr3_1:80382386-80382405 | None:intergenic | 35.0% |
| !!! | TTTTTAAAGCTACGAGGTTG+TGG | - | chr3_1:80382467-80382486 | None:intergenic | 35.0% |
| !!! | CCATAGTTTTTAAAGCTACG+AGG | - | chr3_1:80382473-80382492 | None:intergenic | 35.0% |
| !! | CCTCGTAGCTTTAAAAACTA+TGG | + | chr3_1:80382470-80382489 | Msa0379310:intron | 35.0% |
| ! | TGTATTGGGCTGAATTTTGA+TGG | + | chr3_1:80382493-80382512 | Msa0379310:intron | 35.0% |
| ! | ACCTTTTGTGAAAAAGATGG+CGG | + | chr3_1:80382603-80382622 | Msa0379310:intron | 35.0% |
| GGATCAAACAAAAATGTCTC+AGG | - | chr3_1:80382920-80382939 | None:intergenic | 35.0% | |
| !! | CAATAGAGCATTTTCCTACT+AGG | - | chr3_1:80382963-80382982 | None:intergenic | 35.0% |
| TTGCTTATAATAGTGACCAG+AGG | + | chr3_1:80383208-80383227 | Msa0379310:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | + | chr3_1:80383209-80383228 | Msa0379310:intron | 35.0% | |
| AAGGCAAAGATACCAAATCA+TGG | - | chr3_1:80383365-80383384 | None:intergenic | 35.0% | |
| !!! | ACACTTTTTTCACCTCACAA+AGG | - | chr3_1:80383465-80383484 | None:intergenic | 35.0% |
| AAGTAAACGGAAATGCTAAC+CGG | - | chr3_1:80383670-80383689 | None:intergenic | 35.0% | |
| !! | GAAATTTGACTTGGCTGATT+GGG | - | chr3_1:80383877-80383896 | None:intergenic | 35.0% |
| CTATTGGTGGAAATTTGACT+TGG | - | chr3_1:80383886-80383905 | None:intergenic | 35.0% | |
| CAAGTCAAATTTCCACCAAT+AGG | + | chr3_1:80383884-80383903 | Msa0379310:CDS | 35.0% | |
| AATGGCTGATAATCACCTAT+TGG | - | chr3_1:80383902-80383921 | None:intergenic | 35.0% | |
| GTTCACTGCTCCAATTTAAA+TGG | - | chr3_1:80383920-80383939 | None:intergenic | 35.0% | |
| ! | GTGTTTGGTTTCAATTCTAG+AGG | + | chr3_1:80384028-80384047 | Msa0379310:three_prime_UTR | 35.0% |
| AACACTGCAGCTAAAACGAA+AGG | + | chr3_1:80376369-80376388 | Msa0379310:five_prime_UTR | 40.0% | |
| TTCGACGCTGTTAAAACGAA+AGG | + | chr3_1:80376425-80376444 | Msa0379310:five_prime_UTR | 40.0% | |
| TTCTGTATTTGTCACTGCTG+TGG | + | chr3_1:80376752-80376771 | Msa0379310:CDS | 40.0% | |
| CTGTGGTATTTCACATGAAC+TGG | + | chr3_1:80376769-80376788 | Msa0379310:CDS | 40.0% | |
| ! | GATATAGGGCCTGTTTGTTT+TGG | + | chr3_1:80376982-80377001 | Msa0379310:intron | 40.0% |
| CGACCGAAACATGTGATTAT+TGG | - | chr3_1:80377321-80377340 | None:intergenic | 40.0% | |
| TTTAGAGATGGAAGTCAAGC+AGG | - | chr3_1:80378162-80378181 | None:intergenic | 40.0% | |
| !! | CGCATTCCTGATTTTAGAGA+TGG | - | chr3_1:80378174-80378193 | None:intergenic | 40.0% |
| ! | TTTCACCTTTTGACGCAGTA+CGG | + | chr3_1:80378199-80378218 | Msa0379310:intron | 40.0% |
| ! | TCCGGAAACCCTTATTTGAT+AGG | - | chr3_1:80378284-80378303 | None:intergenic | 40.0% |
| !! | CTCTCAATTATGGTGGATTC+CGG | - | chr3_1:80378302-80378321 | None:intergenic | 40.0% |
| CAGAACTTATGTAGCCTAAG+AGG | - | chr3_1:80378361-80378380 | None:intergenic | 40.0% | |
| TTAGGGAAGTCAACAAGCAT+GGG | - | chr3_1:80378577-80378596 | None:intergenic | 40.0% | |
| ATTAGGGAAGTCAACAAGCA+TGG | - | chr3_1:80378578-80378597 | None:intergenic | 40.0% | |
| GGGTGGTTTCTTGTTCATTA+GGG | - | chr3_1:80378594-80378613 | None:intergenic | 40.0% | |
| AGGGTGGTTTCTTGTTCATT+AGG | - | chr3_1:80378595-80378614 | None:intergenic | 40.0% | |
| GGAGTATATCTTCTGCACAA+AGG | - | chr3_1:80378668-80378687 | None:intergenic | 40.0% | |
| GTTGGCCAAGAGTCAAAATT+TGG | + | chr3_1:80378789-80378808 | Msa0379310:intron | 40.0% | |
| ACATGTGTGAAATTGGACCA+TGG | - | chr3_1:80378911-80378930 | None:intergenic | 40.0% | |
| ! | GACTTCAGAAAGTATGTTGC+AGG | - | chr3_1:80378966-80378985 | None:intergenic | 40.0% |
| ! | TATGGAGAGAGCTTTGTCAT+TGG | - | chr3_1:80379125-80379144 | None:intergenic | 40.0% |
| AGTACAACATCGGATATCTG+AGG | - | chr3_1:80379206-80379225 | None:intergenic | 40.0% | |
| !! | TAGACAACCGAAGGCATTTA+AGG | - | chr3_1:80379254-80379273 | None:intergenic | 40.0% |
| AAGCGTGATAAAGTTGAAGG+AGG | - | chr3_1:80379344-80379363 | None:intergenic | 40.0% | |
| ! | GGAAAGCGTGATAAAGTTGA+AGG | - | chr3_1:80379347-80379366 | None:intergenic | 40.0% |
| TTACTATTGGACCATCACCA+CGG | - | chr3_1:80379423-80379442 | None:intergenic | 40.0% | |
| TTACTATTGGACCATCACCA+CGG | - | chr3_1:80379423-80379442 | None:intergenic | 40.0% | |
| CATATTGCAACTTGTCGATC+CGG | + | chr3_1:80379703-80379722 | Msa0379310:intron | 40.0% | |
| GGGTATGATGAAAGTGGTTT+AGG | + | chr3_1:80379799-80379818 | Msa0379310:intron | 40.0% | |
| ! | CATAGTTTCAGTTTTCGGCA+CGG | + | chr3_1:80379843-80379862 | Msa0379310:intron | 40.0% |
| ! | TGCTGCTTCTACTTTCATCT+CGG | + | chr3_1:80379891-80379910 | Msa0379310:intron | 40.0% |
| TTCATCTCGGTGACAATTTC+AGG | + | chr3_1:80379904-80379923 | Msa0379310:intron | 40.0% | |
| ! | GGACTAATTTTTGTTGCTGC+AGG | + | chr3_1:80379973-80379992 | Msa0379310:intron | 40.0% |
| ! | TGCAGGAAGAGTCTTATCAT+TGG | + | chr3_1:80379990-80380009 | Msa0379310:intron | 40.0% |
| ! | AGGAAGAGTCTTATCATTGG+TGG | + | chr3_1:80379993-80380012 | Msa0379310:intron | 40.0% |
| ! | GTCTTATCATTGGTGGATGT+TGG | + | chr3_1:80380000-80380019 | Msa0379310:intron | 40.0% |
| !! | GTAAGGATCTTTGAGATGGT+GGG | - | chr3_1:80380113-80380132 | None:intergenic | 40.0% |
| !! | AGTAAGGATCTTTGAGATGG+TGG | - | chr3_1:80380114-80380133 | None:intergenic | 40.0% |
| TATGAGGGAGCAGATAAGTA+AGG | - | chr3_1:80380130-80380149 | None:intergenic | 40.0% | |
| TCCTACTGATGAGGATATGA+GGG | - | chr3_1:80380145-80380164 | None:intergenic | 40.0% | |
| ATCCTACTGATGAGGATATG+AGG | - | chr3_1:80380146-80380165 | None:intergenic | 40.0% | |
| ! | CAGGATTTTGTCATACGTAG+TGG | - | chr3_1:80380180-80380199 | None:intergenic | 40.0% |
| AAAACGGCACAATACGACAA+TGG | + | chr3_1:80380234-80380253 | Msa0379310:intron | 40.0% | |
| CAGAAAGCAACTCACAGAAA+TGG | + | chr3_1:80380384-80380403 | Msa0379310:intron | 40.0% | |
| AAAGCAACTCACAGAAATGG+CGG | + | chr3_1:80380387-80380406 | Msa0379310:intron | 40.0% | |
| CGCAATGGAAAATTGTGAGT+AGG | + | chr3_1:80380410-80380429 | Msa0379310:intron | 40.0% | |
| !! | TGGAAGGAGCTTTAAGCAAA+AGG | - | chr3_1:80380629-80380648 | None:intergenic | 40.0% |
| ACGAGTCTCGTGTAAAAACA+AGG | + | chr3_1:80380768-80380787 | Msa0379310:intron | 40.0% | |
| ! | GTAATGTTTTCTCCAGCATG+TGG | + | chr3_1:80381207-80381226 | Msa0379310:intron | 40.0% |
| TTACATTGCTATCAGTCCCT+TGG | + | chr3_1:80381339-80381358 | Msa0379310:CDS | 40.0% | |
| AACTTATACTGCTCCACATG+AGG | - | chr3_1:80381528-80381547 | None:intergenic | 40.0% | |
| !!! | ACTTTTAGAGCTTGGTCTTC+GGG | - | chr3_1:80381582-80381601 | None:intergenic | 40.0% |
| GGATCTATTGCACGTAATGA+TGG | + | chr3_1:80381674-80381693 | Msa0379310:intron | 40.0% | |
| TAAACAGATACTGACAGCAG+GGG | - | chr3_1:80381877-80381896 | None:intergenic | 40.0% | |
| GTTAAACAGATACTGACAGC+AGG | - | chr3_1:80381879-80381898 | None:intergenic | 40.0% | |
| TTAACTTACAGCAGGGGTAA+CGG | + | chr3_1:80382182-80382201 | Msa0379310:intron | 40.0% | |
| TAGGGTTCGAAACTTAGCAA+GGG | - | chr3_1:80382311-80382330 | None:intergenic | 40.0% | |
| AGCGGTCACTAACATAAGAT+AGG | + | chr3_1:80382542-80382561 | Msa0379310:intron | 40.0% | |
| CATTAGACAAAAAGATGGGG+TGG | + | chr3_1:80382579-80382598 | Msa0379310:intron | 40.0% | |
| ! | GGCACCTTTTGTGAAAAAGA+TGG | + | chr3_1:80382600-80382619 | Msa0379310:intron | 40.0% |
| !! | TCCGCCATCTTTTTCACAAA+AGG | - | chr3_1:80382607-80382626 | None:intergenic | 40.0% |
| CCAATCTATAGTCTGCTCAA+TGG | - | chr3_1:80382711-80382730 | None:intergenic | 40.0% | |
| CCATTGAGCAGACTATAGAT+TGG | + | chr3_1:80382708-80382727 | Msa0379310:intron | 40.0% | |
| TCATAATGTACTACACCCTC+TGG | - | chr3_1:80383227-80383246 | None:intergenic | 40.0% | |
| CTGGCATTTACGACAAAATC+AGG | - | chr3_1:80383288-80383307 | None:intergenic | 40.0% | |
| CTTTGTTCACGACCATGATT+TGG | + | chr3_1:80383350-80383369 | Msa0379310:intron | 40.0% | |
| TACTTACGGGTCATGTTAAC+CGG | + | chr3_1:80383487-80383506 | Msa0379310:intron | 40.0% | |
| TTGTCAGTAATCATCAAGCC+CGG | + | chr3_1:80383842-80383861 | Msa0379310:CDS | 40.0% | |
| !! | GGAAATTTGACTTGGCTGAT+TGG | - | chr3_1:80383878-80383897 | None:intergenic | 40.0% |
| ! | TTTTATGCTCTGATAGGGGA+AGG | + | chr3_1:80383955-80383974 | Msa0379310:three_prime_UTR | 40.0% |
| TTGTAATCATGTGCGGCGAA+AGG | - | chr3_1:80376487-80376506 | None:intergenic | 45.0% | |
| TGACTGACAGATGGATAGGA+AGG | + | chr3_1:80376719-80376738 | Msa0379310:intron | 45.0% | |
| GTATTTCACATGAACTGGCG+AGG | + | chr3_1:80376774-80376793 | Msa0379310:CDS | 45.0% | |
| ACCTCAAGAACAACAAGAGC+AGG | - | chr3_1:80376834-80376853 | None:intergenic | 45.0% | |
| GCTATAGGAGTGAGTCTTCT+AGG | + | chr3_1:80377407-80377426 | Msa0379310:intron | 45.0% | |
| CCAATAACAGTGCAAGATGG+AGG | - | chr3_1:80377920-80377939 | None:intergenic | 45.0% | |
| CCTCCATCTTGCACTGTTAT+TGG | + | chr3_1:80377917-80377936 | Msa0379310:intron | 45.0% | |
| GGCCAAGAGTCAAAATTTGG+TGG | + | chr3_1:80378792-80378811 | Msa0379310:intron | 45.0% | |
| !! | GTGCAAAGCTTTGGATGATG+AGG | - | chr3_1:80378862-80378881 | None:intergenic | 45.0% |
| TGTGTGAAATTGGACCATGG+TGG | - | chr3_1:80378908-80378927 | None:intergenic | 45.0% | |
| GGAGTTGTGCATGTGATACT+TGG | + | chr3_1:80379056-80379075 | Msa0379310:intron | 45.0% | |
| GGAACATGATAGACAACCGA+AGG | - | chr3_1:80379263-80379282 | None:intergenic | 45.0% | |
| !! | GTGGTGATGGTCCAATAGTA+AGG | + | chr3_1:80379422-80379441 | Msa0379310:intron | 45.0% |
| CATGTAGCAACTTGTCGATC+CGG | + | chr3_1:80379510-80379529 | Msa0379310:intron | 45.0% | |
| !! | GTGGTGATGGTCCAATAGTA+AGG | + | chr3_1:80379422-80379441 | Msa0379310:intron | 45.0% |
| !!! | AGATTTGGTGGTTTTACCGG+TGG | + | chr3_1:80379751-80379770 | Msa0379310:intron | 45.0% |
| ATATGTCAAACCTCCTCCAC+CGG | - | chr3_1:80379770-80379789 | None:intergenic | 45.0% | |
| CGTGCCGAAAACTGAAACTA+TGG | - | chr3_1:80379845-80379864 | None:intergenic | 45.0% | |
| TTCGGCACGGAGTTTATTTC+AGG | + | chr3_1:80379856-80379875 | Msa0379310:intron | 45.0% | |
| ACGGAGTTTATTTCAGGAGC+AGG | + | chr3_1:80379862-80379881 | Msa0379310:intron | 45.0% | |
| TCCCTCATATCCTCATCAGT+AGG | + | chr3_1:80380141-80380160 | Msa0379310:intron | 45.0% | |
| !! | TGAAGTTTCTGGCAAAGTCG+AGG | + | chr3_1:80381027-80381046 | Msa0379310:CDS | 45.0% |
| ACCACTATCACAGGTGAAGA+TGG | + | chr3_1:80381241-80381260 | Msa0379310:CDS | 45.0% | |
| ACCATCTTCACCTGTGATAG+TGG | - | chr3_1:80381245-80381264 | None:intergenic | 45.0% | |
| ACTATCACAGGTGAAGATGG+TGG | + | chr3_1:80381244-80381263 | Msa0379310:CDS | 45.0% | |
| CTATCACAGGTGAAGATGGT+GGG | + | chr3_1:80381245-80381264 | Msa0379310:CDS | 45.0% | |
| TTGCCGGTGAACTTGTGATT+AGG | - | chr3_1:80381283-80381302 | None:intergenic | 45.0% | |
| CTCTTGATACGCCAATGAGA+CGG | - | chr3_1:80381319-80381338 | None:intergenic | 45.0% | |
| GCAGTATAAGTTGCACGAAC+TGG | + | chr3_1:80381536-80381555 | Msa0379310:CDS | 45.0% | |
| ! | CTCACTCGGCTTGAATTTCA+TGG | - | chr3_1:80381710-80381729 | None:intergenic | 45.0% |
| AAACAGATACTGACAGCAGG+GGG | - | chr3_1:80381876-80381895 | None:intergenic | 45.0% | |
| !! | TGCTGCCTTTTAAAAGCTCC+TGG | + | chr3_1:80381935-80381954 | Msa0379310:intron | 45.0% |
| !! | GCTGCCTTTTAAAAGCTCCT+GGG | + | chr3_1:80381936-80381955 | Msa0379310:intron | 45.0% |
| ! | GACACCCAGGAGCTTTTAAA+AGG | - | chr3_1:80381943-80381962 | None:intergenic | 45.0% |
| CTAGGGTTCGAAACTTAGCA+AGG | - | chr3_1:80382312-80382331 | None:intergenic | 45.0% | |
| AATAGTGCTTATAGTGGCGC+TGG | + | chr3_1:80382755-80382774 | Msa0379310:intron | 45.0% | |
| !! | TGAGGAGTACCTCAGTGTAA+AGG | + | chr3_1:80383080-80383099 | Msa0379310:CDS | 45.0% |
| TTCTTATGGAGTACACCCTC+TGG | + | chr3_1:80383134-80383153 | Msa0379310:intron | 45.0% | |
| AGTAATCTTAACCAGTGCCC+CGG | + | chr3_1:80383639-80383658 | Msa0379310:intron | 45.0% | |
| GGCTGATAATCACCTATTGG+TGG | - | chr3_1:80383899-80383918 | None:intergenic | 45.0% | |
| !!! | AATAATTTGAAATTAAAATT+AGG | + | chr3_1:80376596-80376615 | Msa0379310:intron | 5.0% |
| !! | TAATTTAATAAAATGATATA+GGG | + | chr3_1:80376968-80376987 | Msa0379310:intron | 5.0% |
| !! | AATAAAAACAAATAAAAAAA+AGG | + | chr3_1:80380349-80380368 | Msa0379310:intron | 5.0% |
| !!! | TTATTTTTTATTTTCTTAAA+TGG | + | chr3_1:80381104-80381123 | Msa0379310:intron | 5.0% |
| !!! | TATTTTTTATTTTCTTAAAT+GGG | + | chr3_1:80381105-80381124 | Msa0379310:intron | 5.0% |
| TGCACATATACACCAGCGCA+TGG | - | chr3_1:80376805-80376824 | None:intergenic | 50.0% | |
| !! | GCCTGCTCTTGTTGTTCTTG+AGG | + | chr3_1:80376830-80376849 | Msa0379310:CDS | 50.0% |
| ATACTTAGCCCCGTTTGTCC+TGG | + | chr3_1:80377496-80377515 | Msa0379310:intron | 50.0% | |
| AGAGATGGAAGTCAAGCAGG+AGG | - | chr3_1:80378159-80378178 | None:intergenic | 50.0% | |
| TGCTTCCGTACTGCGTCAAA+AGG | - | chr3_1:80378207-80378226 | None:intergenic | 50.0% | |
| TTTGACGCAGTACGGAAGCA+AGG | + | chr3_1:80378207-80378226 | Msa0379310:intron | 50.0% | |
| TTGACGCAGTACGGAAGCAA+GGG | + | chr3_1:80378208-80378227 | Msa0379310:intron | 50.0% | |
| ! | GTCGAGTTCTTTAGAGGTGG+AGG | - | chr3_1:80378526-80378545 | None:intergenic | 50.0% |
| CTTGGGGTCGAGTTCTTTAG+AGG | - | chr3_1:80378532-80378551 | None:intergenic | 50.0% | |
| TGAACAAGAAACCACCCTCC+TGG | + | chr3_1:80378597-80378616 | Msa0379310:intron | 50.0% | |
| CATACCACTCAATGGGATCC+AGG | - | chr3_1:80378618-80378637 | None:intergenic | 50.0% | |
| GTTTGGAAAGAGGGCTATGC+AGG | - | chr3_1:80379371-80379390 | None:intergenic | 50.0% | |
| TGTCGATCCGGTGGTTTCTT+CGG | + | chr3_1:80379522-80379541 | Msa0379310:intron | 50.0% | |
| GTTTGGAAAGAGGGCTATGC+AGG | - | chr3_1:80379371-80379390 | None:intergenic | 50.0% | |
| ATTGCAACTTGTCGATCCGG+TGG | + | chr3_1:80379706-80379725 | Msa0379310:intron | 50.0% | |
| TGTCGATCCGGTGGTTTCTT+CGG | + | chr3_1:80379522-80379541 | Msa0379310:intron | 50.0% | |
| AGCGGCGATTGAAGATTTGG+TGG | + | chr3_1:80379739-80379758 | Msa0379310:intron | 50.0% | |
| !! | TTTGGTGGTTTTACCGGTGG+AGG | + | chr3_1:80379754-80379773 | Msa0379310:intron | 50.0% |
| GGTGGAGGAGGTTTGACATA+TGG | + | chr3_1:80379769-80379788 | Msa0379310:intron | 50.0% | |
| ACGGCACAATACGACAATGG+TGG | + | chr3_1:80380237-80380256 | Msa0379310:intron | 50.0% | |
| GTGGCTTGAAGGAATCGAAG+AGG | + | chr3_1:80380553-80380572 | Msa0379310:intron | 50.0% | |
| ! | GTTTTCTCCAGCATGTGGGT+TGG | + | chr3_1:80381212-80381231 | Msa0379310:intron | 50.0% |
| TGGTGGTTGACCACTATCAC+AGG | + | chr3_1:80381232-80381251 | Msa0379310:CDS | 50.0% | |
| TATTGTAGCTGGTATGCGCG+AGG | + | chr3_1:80381488-80381507 | Msa0379310:CDS | 50.0% | |
| GGGATTGCTGTCCTCCAAAA+GGG | - | chr3_1:80381562-80381581 | None:intergenic | 50.0% | |
| ATACTGACAGCAGGGGGTAA+TGG | - | chr3_1:80381870-80381889 | None:intergenic | 50.0% | |
| AACATAGCGTTTGGACACCC+AGG | - | chr3_1:80381956-80381975 | None:intergenic | 50.0% | |
| CACTCACGTGGTTGAGTTAG+TGG | - | chr3_1:80382361-80382380 | None:intergenic | 50.0% | |
| ! | ATAGTGGCGCTGGAACATAG+CGG | + | chr3_1:80382765-80382784 | Msa0379310:intron | 50.0% |
| AGCGCATCGCAAAGCAATAG+TGG | - | chr3_1:80382803-80382822 | None:intergenic | 50.0% | |
| ATGTGGTGTGGTCTACCAGA+GGG | - | chr3_1:80383152-80383171 | None:intergenic | 50.0% | |
| AATGTGGTGTGGTCTACCAG+AGG | - | chr3_1:80383153-80383172 | None:intergenic | 50.0% | |
| GTTTCATGTGCGCCTTTGTG+AGG | + | chr3_1:80383450-80383469 | Msa0379310:intron | 50.0% | |
| GTAATCTTAACCAGTGCCCC+GGG | + | chr3_1:80383640-80383659 | Msa0379310:intron | 50.0% | |
| TAATCTTAACCAGTGCCCCG+GGG | + | chr3_1:80383641-80383660 | Msa0379310:intron | 50.0% | |
| !! | TTGACTTGGCTGATTGGGAG+TGG | - | chr3_1:80383872-80383891 | None:intergenic | 50.0% |
| CTCTGATAGGGGAAGGACAA+GGG | + | chr3_1:80383962-80383981 | Msa0379310:three_prime_UTR | 50.0% | |
| ! | GCTTAGACTGTTCGACTCGC+AGG | + | chr3_1:80376454-80376473 | Msa0379310:five_prime_UTR | 55.0% |
| TGGAGGAGACTGATGCAGGA+GGG | - | chr3_1:80378509-80378528 | None:intergenic | 55.0% | |
| ! | GGGGTCGAGTTCTTTAGAGG+TGG | - | chr3_1:80378529-80378548 | None:intergenic | 55.0% |
| CCACTCAATGGGATCCAGGA+GGG | - | chr3_1:80378614-80378633 | None:intergenic | 55.0% | |
| ACCACTCAATGGGATCCAGG+AGG | - | chr3_1:80378615-80378634 | None:intergenic | 55.0% | |
| ! | GTTGGGTCGATTAGCCACCA+TGG | + | chr3_1:80378891-80378910 | Msa0379310:intron | 55.0% |
| TGGAAAGAGGGCTATGCAGG+TGG | - | chr3_1:80379368-80379387 | None:intergenic | 55.0% | |
| ACAGTCTCTCCCTTATGCCG+TGG | + | chr3_1:80379403-80379422 | Msa0379310:intron | 55.0% | |
| TCTCCCTTATGCCGTGGTGA+TGG | + | chr3_1:80379409-80379428 | Msa0379310:intron | 55.0% | |
| GGACCATCACCACGGCATAA+GGG | - | chr3_1:80379415-80379434 | None:intergenic | 55.0% | |
| TGGACCATCACCACGGCATA+AGG | - | chr3_1:80379416-80379435 | None:intergenic | 55.0% | |
| GTAGCAACTTGTCGATCCGG+TGG | + | chr3_1:80379513-80379532 | Msa0379310:intron | 55.0% | |
| TGGAAAGAGGGCTATGCAGG+TGG | - | chr3_1:80379368-80379387 | None:intergenic | 55.0% | |
| ACAGTCTCTCCCTTATGCCG+TGG | + | chr3_1:80379403-80379422 | Msa0379310:intron | 55.0% | |
| TCTCCCTTATGCCGTGGTGA+TGG | + | chr3_1:80379409-80379428 | Msa0379310:intron | 55.0% | |
| GGACCATCACCACGGCATAA+GGG | - | chr3_1:80379415-80379434 | None:intergenic | 55.0% | |
| TGGACCATCACCACGGCATA+AGG | - | chr3_1:80379416-80379435 | None:intergenic | 55.0% | |
| GGCAGCGGCGATTGAAGATT+TGG | + | chr3_1:80379736-80379755 | Msa0379310:intron | 55.0% | |
| !! | AGTCCAGAGCTTGCTACAGC+TGG | - | chr3_1:80379958-80379977 | None:intergenic | 55.0% |
| TCACAGAAATGGCGGCGCAA+TGG | + | chr3_1:80380395-80380414 | Msa0379310:intron | 55.0% | |
| AAAATGGTGCGGTGCCTTCC+CGG | + | chr3_1:80380812-80380831 | Msa0379310:intron | 55.0% | |
| CTTCCCGGACCTTGCATATG+CGG | + | chr3_1:80380827-80380846 | Msa0379310:intron | 55.0% | |
| TTCCCGGACCTTGCATATGC+GGG | + | chr3_1:80380828-80380847 | Msa0379310:intron | 55.0% | |
| CTAAGGCTCCCGCATATGCA+AGG | - | chr3_1:80380839-80380858 | None:intergenic | 55.0% | |
| AAGGGCAGTCTGGTGCACTA+AGG | - | chr3_1:80380856-80380875 | None:intergenic | 55.0% | |
| !! | TTCTCCAGCATGTGGGTTGG+TGG | + | chr3_1:80381215-80381234 | Msa0379310:intron | 55.0% |
| TCAACCACCAACCCACATGC+TGG | - | chr3_1:80381222-80381241 | None:intergenic | 55.0% | |
| ! | AGCTGGTATGCGCGAGGTTT+TGG | + | chr3_1:80381494-80381513 | Msa0379310:CDS | 55.0% |
| ! | GTTGCACGAACTGGCCCTTT+TGG | + | chr3_1:80381545-80381564 | Msa0379310:CDS | 55.0% |
| CGGGATTGCTGTCCTCCAAA+AGG | - | chr3_1:80381563-80381582 | None:intergenic | 55.0% | |
| TCGACTCAGCTCAGCCTAGT+AGG | + | chr3_1:80382946-80382965 | Msa0379310:intron | 55.0% | |
| GGTCATGTTAACCGGTGCTC+CGG | + | chr3_1:80383495-80383514 | Msa0379310:intron | 55.0% | |
| GTCATGTTAACCGGTGCTCC+GGG | + | chr3_1:80383496-80383515 | Msa0379310:intron | 55.0% | |
| TTGCATGCTTAACCGGTGCC+CGG | - | chr3_1:80383517-80383536 | None:intergenic | 55.0% | |
| AATCTTAACCAGTGCCCCGG+GGG | + | chr3_1:80383642-80383661 | Msa0379310:intron | 55.0% | |
| CTGATTGGGAGTGGCTAACC+GGG | - | chr3_1:80383863-80383882 | None:intergenic | 55.0% | |
| GCTGATTGGGAGTGGCTAAC+CGG | - | chr3_1:80383864-80383883 | None:intergenic | 55.0% | |
| GCTCTGATAGGGGAAGGACA+AGG | + | chr3_1:80383961-80383980 | Msa0379310:three_prime_UTR | 55.0% | |
| GTGGAGGAGACTGATGCAGG+AGG | - | chr3_1:80378510-80378529 | None:intergenic | 60.0% | |
| GAGGTGGAGGAGACTGATGC+AGG | - | chr3_1:80378513-80378532 | None:intergenic | 60.0% | |
| CTCAATGGGATCCAGGAGGG+TGG | - | chr3_1:80378611-80378630 | None:intergenic | 60.0% | |
| CCCTCCTGGATCCCATTGAG+TGG | + | chr3_1:80378611-80378630 | Msa0379310:intron | 60.0% | |
| TCCGGTGGTTTCTTCGGCAG+CGG | + | chr3_1:80379528-80379547 | Msa0379310:intron | 60.0% | |
| ACCGCTGCCGAAGAAACCAC+CGG | - | chr3_1:80379532-80379551 | None:intergenic | 60.0% | |
| TCCGGTGGTTTCTTCGGCAG+CGG | + | chr3_1:80379528-80379547 | Msa0379310:intron | 60.0% | |
| !! | GGTGGTTTTACCGGTGGAGG+AGG | + | chr3_1:80379757-80379776 | Msa0379310:intron | 60.0% |
| CTGCCAGCTGTAGCAAGCTC+TGG | + | chr3_1:80379952-80379971 | Msa0379310:intron | 60.0% | |
| !!! | GGGAAGGCACCGCACCATTT+TGG | - | chr3_1:80380813-80380832 | None:intergenic | 60.0% |
| CGCATATGCAAGGTCCGGGA+AGG | - | chr3_1:80380829-80380848 | None:intergenic | 60.0% | |
| CTCCCGCATATGCAAGGTCC+GGG | - | chr3_1:80380833-80380852 | None:intergenic | 60.0% | |
| GCTCCCGCATATGCAAGGTC+CGG | - | chr3_1:80380834-80380853 | None:intergenic | 60.0% | |
| ! | GCACGAACTGGCCCTTTTGG+AGG | + | chr3_1:80381548-80381567 | Msa0379310:CDS | 60.0% |
| TGAGGGATGGGTCACTCACG+TGG | - | chr3_1:80382373-80382392 | None:intergenic | 60.0% | |
| GCTGAGCTGAGTCGACACCA+TGG | - | chr3_1:80382941-80382960 | None:intergenic | 60.0% | |
| AAATGCTAACCGGTGCCCCC+GGG | - | chr3_1:80383660-80383679 | None:intergenic | 60.0% | |
| GAAATGCTAACCGGTGCCCC+CGG | - | chr3_1:80383661-80383680 | None:intergenic | 60.0% | |
| GGCGAGGTTACTCCATGCGC+TGG | + | chr3_1:80376790-80376809 | Msa0379310:CDS | 65.0% | |
| GCCGCTGCCGAAGAAACCAC+CGG | - | chr3_1:80379725-80379744 | None:intergenic | 65.0% | |
| TTAACCGGTGCTCCGGGCAC+CGG | + | chr3_1:80383502-80383521 | Msa0379310:intron | 65.0% | |
| TTAACCGGTGCCCGGAGCAC+CGG | - | chr3_1:80383509-80383528 | None:intergenic | 65.0% | |
| AATGCTAACCGGTGCCCCCG+GGG | - | chr3_1:80383659-80383678 | None:intergenic | 65.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+CGG | + | chr3_1:80383648-80383667 | Msa0379310:intron | 75.0% |
| ! | AACCGGTGCCCCCGGGGCAC+TGG | - | chr3_1:80383653-80383672 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 80376308 | 80384145 | 80376308 | ID=Msa0379310;Name=Msa0379310 |
| chr3_1 | mRNA | 80376308 | 80384145 | 80376308 | ID=Msa0379310-mRNA-1;Parent=Msa0379310;Name=Msa0379310-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168|1|1|1|0.66|0.57|7|236|222 |
| chr3_1 | exon | 80376308 | 80376475 | 80376308 | ID=Msa0379310-mRNA-1:exon:20044;Parent=Msa0379310-mRNA-1 |
| chr3_1 | exon | 80376729 | 80376851 | 80376729 | ID=Msa0379310-mRNA-1:exon:20045;Parent=Msa0379310-mRNA-1 |
| chr3_1 | exon | 80380926 | 80381048 | 80380926 | ID=Msa0379310-mRNA-1:exon:20046;Parent=Msa0379310-mRNA-1 |
| chr3_1 | exon | 80381223 | 80381378 | 80381223 | ID=Msa0379310-mRNA-1:exon:20047;Parent=Msa0379310-mRNA-1 |
| chr3_1 | exon | 80381486 | 80381599 | 80381486 | ID=Msa0379310-mRNA-1:exon:20048;Parent=Msa0379310-mRNA-1 |
| chr3_1 | exon | 80383045 | 80383101 | 80383045 | ID=Msa0379310-mRNA-1:exon:20049;Parent=Msa0379310-mRNA-1 |
| chr3_1 | exon | 80383814 | 80384145 | 80383814 | ID=Msa0379310-mRNA-1:exon:20050;Parent=Msa0379310-mRNA-1 |
| chr3_1 | five_prime_UTR | 80376308 | 80376475 | 80376308 | ID=Msa0379310-mRNA-1:five_prime_utr;Parent=Msa0379310-mRNA-1 |
| chr3_1 | CDS | 80376729 | 80376851 | 80376729 | ID=Msa0379310-mRNA-1:cds;Parent=Msa0379310-mRNA-1 |
| chr3_1 | CDS | 80380926 | 80381048 | 80380926 | ID=Msa0379310-mRNA-1:cds;Parent=Msa0379310-mRNA-1 |
| chr3_1 | CDS | 80381223 | 80381378 | 80381223 | ID=Msa0379310-mRNA-1:cds;Parent=Msa0379310-mRNA-1 |
| chr3_1 | CDS | 80381486 | 80381599 | 80381486 | ID=Msa0379310-mRNA-1:cds;Parent=Msa0379310-mRNA-1 |
| chr3_1 | CDS | 80383045 | 80383101 | 80383045 | ID=Msa0379310-mRNA-1:cds;Parent=Msa0379310-mRNA-1 |
| chr3_1 | CDS | 80383814 | 80383909 | 80383814 | ID=Msa0379310-mRNA-1:cds;Parent=Msa0379310-mRNA-1 |
| chr3_1 | three_prime_UTR | 80383910 | 80384145 | 80383910 | ID=Msa0379310-mRNA-1:three_prime_utr;Parent=Msa0379310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
