AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0379330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379330 MtrunA17_Chr3g0132281 93.861 1010 29 2 1 1010 1 977 0.0 1943
Msa0379330 MtrunA17_Chr7g0268031 36.228 403 212 9 12 411 88 448 3.92e-70 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0379330 AT1G78280.1 58.292 1007 340 13 11 1006 6 943 0.0 1177
Msa0379330 AT5G06550.1 35.338 399 213 9 12 408 73 428 1.59e-70 244
Msa0379330 AT5G63080.1 26.690 281 164 11 165 411 7 279 9.37e-19 90.9

Find 232 sgRNAs with CRISPR-Local

Find 800 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTAATGCTAACATATT+TGG 0.141224 3_1:+80414520 Msa0379330:CDS
CCTCTTCTTTGTTAAGATTC+TGG 0.145954 3_1:-80420172 None:intergenic
GCATGGAATACTCTTCTTTC+TGG 0.157901 3_1:+80416148 Msa0379330:CDS
TGACTTGATACCAATTTATT+TGG 0.164384 3_1:+80422597 Msa0379330:CDS
TGATTTCAGTGATCTTTCTA+TGG 0.200906 3_1:+80420948 Msa0379330:CDS
GTCTACATCTTTCAGAGTTT+TGG 0.213866 3_1:-80417900 None:intergenic
GGACTGGAAGCATCGCTTTA+TGG 0.213881 3_1:+80419405 Msa0379330:CDS
CATCCAGAAGCTATAATTTA+TGG 0.214640 3_1:+80417954 Msa0379330:CDS
GATATAAATGAATTATTTAA+AGG 0.220719 3_1:-80420054 None:intergenic
CGAATTTGTATGTTTGGATA+TGG 0.225637 3_1:+80417736 Msa0379330:CDS
TTGCTGCATTTAAATATTTC+CGG 0.228971 3_1:+80424724 Msa0379330:three_prime_UTR
CTCTTCTTTCTGGCCGTAAA+AGG 0.234128 3_1:+80416158 Msa0379330:CDS
TCCTATAGGTGGCTTATAAT+TGG 0.239011 3_1:+80416076 Msa0379330:CDS
CACCCTCAGGTCATGCTAAA+TGG 0.250190 3_1:+80415645 Msa0379330:intron
CATATTAGATCTCTCATATC+TGG 0.253644 3_1:-80418121 None:intergenic
ACGTGGATGGTTTCCCGTTT+GGG 0.269531 3_1:+80419687 Msa0379330:CDS
TTGGATACACACTGACATTA+TGG 0.277456 3_1:+80420792 Msa0379330:CDS
CTAAACACATCCAAATAAAT+TGG 0.279520 3_1:-80422607 None:intergenic
TAACTTCGAATTTGTATGTT+TGG 0.284606 3_1:+80417730 Msa0379330:CDS
TTTGATATGTTGCCAGAAAA+AGG 0.286273 3_1:-80422676 None:intergenic
AACAAACTTGGCCTCCTTCC+TGG 0.289607 3_1:+80419993 Msa0379330:CDS
TTGTTTGAGTATAGGAATAC+TGG 0.294582 3_1:+80419725 Msa0379330:CDS
TCAATCAGTTTGCTAGGAAT+TGG 0.295536 3_1:-80420583 None:intergenic
TTTCCATAAATTATAGCTTC+TGG 0.297974 3_1:-80417957 None:intergenic
AGAATCCATCAAATCTAAAA+TGG 0.298662 3_1:-80413597 None:intergenic
CAGATATGAGAGATCTAATA+TGG 0.307979 3_1:+80418122 Msa0379330:CDS
TGGTTTCCCGTTTGGGGTAT+GGG 0.311759 3_1:+80419694 Msa0379330:CDS
GACATAATCCTTGAACTTCA+TGG 0.326012 3_1:-80415775 None:intergenic
CTCGCGTCGCTTGCGTTAGC+AGG 0.327432 3_1:+80413738 Msa0379330:CDS
CATCGCTTAATTATCAAATA+TGG 0.329184 3_1:-80419797 None:intergenic
ATGGTTTCCCGTTTGGGGTA+TGG 0.336226 3_1:+80419693 Msa0379330:CDS
AACGTGGATGGTTTCCCGTT+TGG 0.339996 3_1:+80419686 Msa0379330:CDS
CATCCATAGTGGTTCTTCAT+TGG 0.346934 3_1:-80414371 None:intergenic
TTGGGCTCGATCGTGCATTC+AGG 0.356498 3_1:-80424749 None:intergenic
TGGCACTCTTTGTACTTCTC+TGG 0.357779 3_1:-80414574 None:intergenic
ATCCCAACTTAAATTGGTAT+AGG 0.361855 3_1:-80419609 None:intergenic
GAGAATGGTTGTCCAAGCTT+TGG 0.365534 3_1:+80418089 Msa0379330:CDS
GATCAGCTGTTACAAAACTA+TGG 0.367650 3_1:+80415708 Msa0379330:CDS
GAAAGGCTTCCTGTTGGTTC+GGG 0.369837 3_1:+80418332 Msa0379330:CDS
TTTCGTCGAAAATATATAAT+GGG 0.370958 3_1:-80415827 None:intergenic
CGAAAGGCTTCCTGTTGGTT+CGG 0.372369 3_1:+80418331 Msa0379330:CDS
CATGGCCTGCCAGGCAGAAA+TGG 0.378327 3_1:+80415679 Msa0379330:CDS
AATGTAAAGGCTGCTGTCTA+TGG 0.380107 3_1:-80414594 None:intergenic
ATTTATTTGGATGTGTTTAG+AGG 0.384148 3_1:+80422610 Msa0379330:CDS
ATCAAACAATGCAGCAGAAT+GGG 0.387429 3_1:+80420140 Msa0379330:CDS
TAGCCGGTAACTCAAGTATA+TGG 0.392078 3_1:+80419774 Msa0379330:CDS
TGGCCATATACTTGAGTTAC+CGG 0.392860 3_1:-80419777 None:intergenic
TGGATGACTCTATGCCTAAA+AGG 0.397240 3_1:+80414388 Msa0379330:CDS
CCTCCTGGAAAAGTGCCTTT+AGG 0.405897 3_1:+80417348 Msa0379330:CDS
TGCCTAAAAGGAGGAGCATC+TGG 0.408109 3_1:+80414400 Msa0379330:CDS
GGGCAACAGCATTGGTCAAC+GGG 0.409974 3_1:+80418060 Msa0379330:CDS
GGTAGTTGTGTACATTCAAT+TGG 0.411189 3_1:-80417614 None:intergenic
GTATAGGAATACTGGGATTC+CGG 0.412569 3_1:+80419733 Msa0379330:CDS
ACAAACTTGGCCTCCTTCCT+GGG 0.419271 3_1:+80419994 Msa0379330:CDS
GTTGTCCATTTCTGCCTGGC+AGG 0.425101 3_1:-80415684 None:intergenic
GAAACATATTCCTAGTGTTA+TGG 0.425446 3_1:+80419556 Msa0379330:CDS
CAGGCATTCTAACCACTTGC+CGG 0.427854 3_1:-80418264 None:intergenic
ATATTGAACGTGAATTAAAC+TGG 0.429371 3_1:+80420079 Msa0379330:CDS
AATCCTATACCAATTTAAGT+TGG 0.431151 3_1:+80419606 Msa0379330:CDS
TTGCATGACGATAATGTCTT+GGG 0.433068 3_1:+80424594 Msa0379330:CDS
TGGCGAATACATGGCCTGCC+AGG 0.433299 3_1:+80415670 Msa0379330:CDS
GATTTCAGTGATCTTTCTAT+GGG 0.433748 3_1:+80420949 Msa0379330:CDS
AATGCTAACATATTTGGAAT+CGG 0.435803 3_1:+80414526 Msa0379330:CDS
ACATGCCCCTAGCTTATTGA+AGG 0.436977 3_1:+80415988 Msa0379330:CDS
ACAGAGGGTGGTCTAAAGTT+TGG 0.438033 3_1:+80422709 Msa0379330:CDS
GCAAGCAATTGTTTGAGTAT+AGG 0.439732 3_1:+80419717 Msa0379330:CDS
ATCCTATACCAATTTAAGTT+GGG 0.441548 3_1:+80419607 Msa0379330:CDS
ATCAGTTGTCCATTTCTGCC+TGG 0.443048 3_1:-80415688 None:intergenic
GAAGCATCGCTTTATGGTTT+AGG 0.443732 3_1:+80419411 Msa0379330:CDS
CACAGAGATCTGGTGCCTCT+TGG 0.445712 3_1:+80416101 Msa0379330:CDS
AAAGATCTCCATGAAGTTCA+AGG 0.447205 3_1:+80415767 Msa0379330:CDS
TGCTTGCCCCATACCCCAAA+CGG 0.447802 3_1:-80419701 None:intergenic
TGTAAATAGGTTTATCTAGT+GGG 0.450022 3_1:+80419351 Msa0379330:intron
GCACCTGGTTATCGTCATAA+AGG 0.453039 3_1:+80417758 Msa0379330:CDS
TTCTTCAATACAAAGGCTCT+TGG 0.456556 3_1:+80414425 Msa0379330:CDS
TATCCAATGAAGAACCACTA+TGG 0.457458 3_1:+80414368 Msa0379330:CDS
TTTGCATGACGATAATGTCT+TGG 0.462274 3_1:+80424593 Msa0379330:CDS
CTGAAATCAAGGAGGTAACT+AGG 0.465174 3_1:-80420934 None:intergenic
GCACTTCTAAACCCTGCTCT+TGG 0.465947 3_1:+80420773 Msa0379330:CDS
TTCCATGCACTTGTAAGAGC+TGG 0.466147 3_1:-80416133 None:intergenic
TTCCTAGTGTTATGGCCAGT+GGG 0.468965 3_1:+80419564 Msa0379330:CDS
TAGAAAGATCACTGAAATCA+AGG 0.469489 3_1:-80420945 None:intergenic
GTCAGTGTGTATCCAAGAGC+AGG 0.469541 3_1:-80420785 None:intergenic
AAGTATACCACTTGGTCAAA+CGG 0.469956 3_1:-80420209 None:intergenic
CAGATAAACGACCATCCTAT+AGG 0.470762 3_1:+80416062 Msa0379330:CDS
CCTTTCGTCATCTGTGGGAG+GGG 0.475975 3_1:-80418315 None:intergenic
TTGAAGCCAACTCCCCTCTC+AGG 0.479773 3_1:+80419534 Msa0379330:CDS
TCGATCGTGCATTCAGGCTC+CGG 0.481122 3_1:-80424743 None:intergenic
TCTAGAACCTGCAGTGATGA+TGG 0.481252 3_1:-80417420 None:intergenic
TCCAATTATAAGCCACCTAT+AGG 0.486415 3_1:-80416077 None:intergenic
AAATATTTAAATGCAGCAAA+TGG 0.488889 3_1:-80424720 None:intergenic
ATAATTGGACCACAGAGATC+TGG 0.489173 3_1:+80416091 Msa0379330:CDS
GCCTTTCGTCATCTGTGGGA+GGG 0.490405 3_1:-80418316 None:intergenic
GAATTATTTAAAGGTGGATG+TGG 0.496530 3_1:-80420045 None:intergenic
AATCAAACAATGCAGCAGAA+TGG 0.499094 3_1:+80420139 Msa0379330:CDS
CAATTTATGTTCCGAGTGGA+TGG 0.499365 3_1:+80417645 Msa0379330:CDS
GGTTTCCCGTTTGGGGTATG+GGG 0.499368 3_1:+80419695 Msa0379330:CDS
ACATGCACCGTCACACCTAA+AGG 0.501322 3_1:-80417363 None:intergenic
TTTACGGTTAATTTAAGCCA+AGG 0.503126 3_1:-80424955 None:intergenic
AGGTGGGCATTATATCCTCC+TGG 0.509762 3_1:+80417333 Msa0379330:intron
GCTTGCCCCATACCCCAAAC+GGG 0.510621 3_1:-80419700 None:intergenic
ATGTTTCCTGAGAGGGGAGT+TGG 0.512138 3_1:-80419540 None:intergenic
AGAAGTTGAGATGACAGTGT+GGG 0.513193 3_1:+80424665 Msa0379330:CDS
TGGAGCTCGGGCAACAGCAT+TGG 0.513686 3_1:+80418052 Msa0379330:CDS
TATACCAATTTAAGTTGGGA+TGG 0.514509 3_1:+80419611 Msa0379330:CDS
TAAATGGACTGGCGAATACA+TGG 0.516680 3_1:+80415661 Msa0379330:CDS
ATTGAGCAGAGGATTTCATC+GGG 0.517061 3_1:-80413686 None:intergenic
AATTTAAGTTGGGATGGAAA+AGG 0.517463 3_1:+80419617 Msa0379330:CDS
CAGTAATCCTTCAATAAGCT+AGG 0.518812 3_1:-80415995 None:intergenic
AACTGAGATCATCAGAGTCA+TGG 0.520852 3_1:+80424640 Msa0379330:CDS
AATTGAGCAGAGGATTTCAT+CGG 0.521661 3_1:-80413687 None:intergenic
AATAAATGACATCTCAATGA+AGG 0.522634 3_1:+80414833 Msa0379330:CDS
CAAGTATGACATGAAGAAAC+CGG 0.525208 3_1:+80414866 Msa0379330:CDS
TAAGTTACTCTGATTTGTCA+AGG 0.527231 3_1:+80417864 Msa0379330:CDS
TTGATAATTAAGCGATGTGA+GGG 0.528989 3_1:+80419803 Msa0379330:CDS
TAGGAATATGTTTCCTGAGA+GGG 0.530545 3_1:-80419547 None:intergenic
TCTTCTTAAGCGCTTTCTGT+CGG 0.530677 3_1:-80413468 None:intergenic
CGGGCAACAGCATTGGTCAA+CGG 0.534919 3_1:+80418059 Msa0379330:CDS
TGGAGGTGGCGTAGGAATAA+CGG 0.535993 3_1:+80413433 Msa0379330:five_prime_UTR
AGGCATAGAGTCATCCATAG+TGG 0.536115 3_1:-80414382 None:intergenic
ATAAATGAATTATTTAAAGG+TGG 0.536575 3_1:-80420051 None:intergenic
TATGGATGATAATATTTACA+TGG 0.536763 3_1:+80420810 Msa0379330:CDS
ATTGCTCTTCAAAATGACAC+TGG 0.537117 3_1:-80419645 None:intergenic
AGTAATCCTTCAATAAGCTA+GGG 0.541163 3_1:-80415994 None:intergenic
TGTTTGAGTATAGGAATACT+GGG 0.542687 3_1:+80419726 Msa0379330:CDS
CAAGGATTATGTCTCATACA+TGG 0.543266 3_1:+80415785 Msa0379330:CDS
GCATGCATTGCACTAAATGC+CGG 0.547137 3_1:+80418245 Msa0379330:CDS
CTGTAAATAGGTTTATCTAG+TGG 0.547357 3_1:+80419350 Msa0379330:intron
TAAGCTGCTAAATATAAATG+AGG 0.548356 3_1:+80420639 Msa0379330:CDS
GGAACATAAATTGTCTCTCC+AGG 0.550858 3_1:-80417635 None:intergenic
AGGAAGCCTTTCGTCATCTG+TGG 0.551264 3_1:-80418321 None:intergenic
AAACTAACTGATCCGTCCGC+CGG 0.551543 3_1:-80419752 None:intergenic
GATCGCAGAATAGACGCTCT+TGG 0.552054 3_1:+80413647 Msa0379330:CDS
ATCCAGCTCTTACAAGTGCA+TGG 0.557351 3_1:+80416131 Msa0379330:CDS
ACCACGTTGGAGTGAAATCC+TGG 0.558962 3_1:+80420908 Msa0379330:CDS
GACGGATCAGTTAGTTTAGC+CGG 0.560179 3_1:+80419758 Msa0379330:CDS
GCGACGCGAGCAGCATCTTG+AGG 0.560780 3_1:-80413725 None:intergenic
GGATTGCTACCCGAACCAAC+AGG 0.563415 3_1:-80418341 None:intergenic
GTGGGAAGATACAACAAACT+TGG 0.564350 3_1:+80419981 Msa0379330:CDS
GAGGTAGAGCAAATCGATGA+TGG 0.564450 3_1:-80420835 None:intergenic
TTGCATTTAAAATTTCTCAA+AGG 0.564534 3_1:+80415736 Msa0379330:CDS
CGTGGATGGTTTCCCGTTTG+GGG 0.564553 3_1:+80419688 Msa0379330:CDS
TTGTTACCATCAAAATGTAA+AGG 0.567945 3_1:-80414607 None:intergenic
AGAAGCTATAATTTATGGAA+AGG 0.568532 3_1:+80417959 Msa0379330:CDS
TGAGACTCCATCATCACTGC+AGG 0.568853 3_1:+80417413 Msa0379330:CDS
CATAAAGGAGTCTGCCGTGT+GGG 0.569358 3_1:+80417773 Msa0379330:CDS
CCAGAATCTTAACAAAGAAG+AGG 0.570253 3_1:+80420172 Msa0379330:CDS
AGCCTTTCGTCATCTGTGGG+AGG 0.570411 3_1:-80418317 None:intergenic
ACCCCACTGGCCATAACACT+AGG 0.575861 3_1:-80419566 None:intergenic
TCAGGTCATGCTAAATGGAC+TGG 0.577021 3_1:+80415650 Msa0379330:intron
AGCATCTTCTGTATTCCCAC+TGG 0.577196 3_1:-80420857 None:intergenic
ACTGAGATCATCAGAGTCAT+GGG 0.579147 3_1:+80424641 Msa0379330:CDS
AGCTATAATTTATGGAAAGG+TGG 0.579530 3_1:+80417962 Msa0379330:CDS
ATTCCTAGTGTTATGGCCAG+TGG 0.580711 3_1:+80419563 Msa0379330:CDS
ATCAAAGTACGAGTCAACAG+AGG 0.583079 3_1:+80422693 Msa0379330:CDS
GAAGTTGAGATGACAGTGTG+GGG 0.583600 3_1:+80424666 Msa0379330:CDS
TCTCAAGCCGTTTGACCAAG+TGG 0.584548 3_1:+80420202 Msa0379330:CDS
CTTTCGTCATCTGTGGGAGG+GGG 0.587951 3_1:-80418314 None:intergenic
TCCTAGTGTTATGGCCAGTG+GGG 0.588471 3_1:+80419565 Msa0379330:CDS
AATACTGGGATTCCGGCGGA+CGG 0.589838 3_1:+80419740 Msa0379330:CDS
GTCAACGGGAACTAAGAGAA+TGG 0.591171 3_1:+80418074 Msa0379330:CDS
AGCAGCTTAGATAAATCAGA+TGG 0.592390 3_1:-80420625 None:intergenic
TTTGATAATTAAGCGATGTG+AGG 0.594501 3_1:+80419802 Msa0379330:CDS
TCGATTTGCTCTACCTCCAG+TGG 0.595230 3_1:+80420841 Msa0379330:CDS
ACAGAGAAATGCAACGTGGA+TGG 0.595885 3_1:+80419674 Msa0379330:CDS
GTAAATAGGTTTATCTAGTG+GGG 0.600129 3_1:+80419352 Msa0379330:intron
ATCTTCTGTATTCCCACTGG+AGG 0.600340 3_1:-80420854 None:intergenic
TATGAGAGATCTAATATGGA+AGG 0.601472 3_1:+80418126 Msa0379330:CDS
TGACTTCAGAATTTCTCAAG+TGG 0.604991 3_1:+80420751 Msa0379330:intron
CTATGTGATGGAGGTGGCGT+AGG 0.605203 3_1:+80413425 Msa0379330:five_prime_UTR
AATCTTAACAAAGAAGAGGA+AGG 0.605956 3_1:+80420176 Msa0379330:CDS
AATACAGAAGATGCTGCCGA+GGG 0.606356 3_1:+80420865 Msa0379330:CDS
GTATGTTTGGATATGGCACC+TGG 0.607998 3_1:+80417743 Msa0379330:CDS
ATTATAAGCCACCTATAGGA+TGG 0.608178 3_1:-80416073 None:intergenic
CCCCTCCCACAGATGACGAA+AGG 0.610507 3_1:+80418315 Msa0379330:CDS
TTGCACTAAATGCCGGCAAG+TGG 0.611811 3_1:+80418252 Msa0379330:CDS
GTGCATGTTAATGAAGAAGA+TGG 0.611852 3_1:+80417378 Msa0379330:CDS
AGCTCCACTCAAAATTGTAG+TGG 0.612842 3_1:-80418036 None:intergenic
GGAAGCCTTTCGTCATCTGT+GGG 0.613871 3_1:-80418320 None:intergenic
CAGAAGAGACAGACTATCGT+GGG 0.616345 3_1:+80419963 Msa0379330:intron
CAAACTTGGCCTCCTTCCTG+GGG 0.618358 3_1:+80419995 Msa0379330:CDS
TGTTTAGAAAGAGAAATAAG+TGG 0.619138 3_1:+80417929 Msa0379330:CDS
TTGCTCTTCAAAATGACACT+GGG 0.620536 3_1:-80419644 None:intergenic
GAATACAGAAGATGCTGCCG+AGG 0.621862 3_1:+80420864 Msa0379330:CDS
CTACGCCACCTCCATCACAT+AGG 0.622116 3_1:-80413424 None:intergenic
TACAGAAGATGCTGCCGAGG+GGG 0.626315 3_1:+80420867 Msa0379330:CDS
TTGTCTTCGTCAGCAAGAAG+AGG 0.627512 3_1:-80417590 None:intergenic
AGGAATATGTTTCCTGAGAG+GGG 0.628568 3_1:-80419546 None:intergenic
GTGGATGTGGTAAAAGATGA+AGG 0.628693 3_1:-80420032 None:intergenic
CGATTTGCTCTACCTCCAGT+GGG 0.629855 3_1:+80420842 Msa0379330:CDS
ATACAGTGCCACCATCCACT+CGG 0.631096 3_1:-80417656 None:intergenic
TCAAACAATGCAGCAGAATG+GGG 0.631106 3_1:+80420141 Msa0379330:CDS
GACGTTCGAGAATTGAGCAG+AGG 0.634922 3_1:-80413697 None:intergenic
GATGACGAAAGGCTTCCTGT+TGG 0.636057 3_1:+80418326 Msa0379330:CDS
TTTATGTTCCGAGTGGATGG+TGG 0.637501 3_1:+80417648 Msa0379330:CDS
TTAAACTGGTCTGAGGTGAA+AGG 0.638216 3_1:+80420093 Msa0379330:CDS
TTCAAGATAAACAACCCCAC+TGG 0.638268 3_1:-80419579 None:intergenic
ATTGAATGTACACAACTACC+TGG 0.639305 3_1:+80417617 Msa0379330:CDS
GCAGAAGAGACAGACTATCG+TGG 0.640708 3_1:+80419962 Msa0379330:intron
CTAGGAATATGTTTCCTGAG+AGG 0.644586 3_1:-80419548 None:intergenic
ACTCCTTTATGACGATAACC+AGG 0.653563 3_1:-80417761 None:intergenic
CAAGAGCAAGCAAACCCACA+CGG 0.656542 3_1:-80417787 None:intergenic
GAGACAATTTATGTTCCGAG+TGG 0.659270 3_1:+80417641 Msa0379330:CDS
TCAAAGTACGAGTCAACAGA+GGG 0.660427 3_1:+80422694 Msa0379330:CDS
TCAGTGTGTATCCAAGAGCA+GGG 0.663517 3_1:-80420784 None:intergenic
AAGGAGGTAACTAGGACACC+AGG 0.663763 3_1:-80420926 None:intergenic
GTAATCCTTCAATAAGCTAG+GGG 0.667445 3_1:-80415993 None:intergenic
AAAAGTGCCTTTAGGTGTGA+CGG 0.668167 3_1:+80417356 Msa0379330:CDS
GGAGAGTTGAACAATTACAA+AGG 0.673689 3_1:+80424687 Msa0379330:CDS
GGTTTATTGAGTGACCACGT+TGG 0.675486 3_1:+80420895 Msa0379330:CDS
AAGAAGTTGAGATGACAGTG+TGG 0.676854 3_1:+80424664 Msa0379330:CDS
AGCTGGATCAACATGCCAAG+AGG 0.677057 3_1:-80416116 None:intergenic
TGTATAAAATGTATCCAGTG+TGG 0.684015 3_1:-80414790 None:intergenic
TATCCAGTGTGGTATGACAC+CGG 0.684470 3_1:-80414779 None:intergenic
ATAAACGACCATCCTATAGG+TGG 0.685021 3_1:+80416065 Msa0379330:CDS
AAACTTGGCCTCCTTCCTGG+GGG 0.689807 3_1:+80419996 Msa0379330:CDS
TGATAATTAAGCGATGTGAG+GGG 0.689937 3_1:+80419804 Msa0379330:CDS
AAGTACGAGTCAACAGAGGG+TGG 0.691127 3_1:+80422697 Msa0379330:CDS
ATGACTCTATGCCTAAAAGG+AGG 0.692833 3_1:+80414391 Msa0379330:CDS
TTATACAGAGGGTGGCAATG+TGG 0.697663 3_1:+80414806 Msa0379330:CDS
TCATAAAGGAGTCTGCCGTG+TGG 0.699636 3_1:+80417772 Msa0379330:CDS
ATACCGGTGTCATACCACAC+TGG 0.707579 3_1:+80414776 Msa0379330:CDS
CTGTATCTAAGATATCGAAG+AGG 0.711016 3_1:-80416042 None:intergenic
TAGGAATACTGGGATTCCGG+CGG 0.711408 3_1:+80419736 Msa0379330:CDS
ACGTGAATTAAACTGGTCTG+AGG 0.711510 3_1:+80420086 Msa0379330:CDS
GCTTTATGGTTTAGGCACAG+AGG 0.719101 3_1:+80419419 Msa0379330:CDS
ATACAGAAGATGCTGCCGAG+GGG 0.739771 3_1:+80420866 Msa0379330:CDS
CAAGAGGCACCAGATCTCTG+TGG 0.740954 3_1:-80416100 None:intergenic
CATCACAGAGAAATGCAACG+TGG 0.742244 3_1:+80419670 Msa0379330:CDS
AAAGATCACTGAAATCAAGG+AGG 0.742693 3_1:-80420942 None:intergenic
ACCAGGATTTCACTCCAACG+TGG 0.759662 3_1:-80420909 None:intergenic
GATGTGGTAAAAGATGAAGG+TGG 0.808325 3_1:-80420029 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAAATGAATAAAAC+AGG - chr3_1:80414505-80414524 None:intergenic 10.0%
!!! AACTTAAATTTTATGTAATT+TGG + chr3_1:80417230-80417249 Msa0379330:intron 10.0%
!! GATATAAATGAATTATTTAA+AGG - chr3_1:80420057-80420076 None:intergenic 10.0%
!! TGAAAAAAAAAAATTATGTT+GGG - chr3_1:80420689-80420708 None:intergenic 10.0%
!! ATGAAAAAAAAAAATTATGT+TGG - chr3_1:80420690-80420709 None:intergenic 10.0%
!!! ACATAATTTTTTTTTTTCAT+TGG + chr3_1:80420690-80420709 Msa0379330:intron 10.0%
!!! AATTTTATAAATAGGATAAA+AGG + chr3_1:80421628-80421647 Msa0379330:intron 10.0%
!!! ATTTTATAAATAGGATAAAA+GGG + chr3_1:80421629-80421648 Msa0379330:intron 10.0%
!! ATATTAGAATTTAATCTTTA+AGG - chr3_1:80423752-80423771 None:intergenic 10.0%
!! TAAGAAATTCAAAATTCAAA+CGG - chr3_1:80413910-80413929 None:intergenic 15.0%
!! AATAGAAATAGTTTATACAT+AGG - chr3_1:80414026-80414045 None:intergenic 15.0%
!! ATATTTAATGCTAACATATT+TGG + chr3_1:80414520-80414539 Msa0379330:CDS 15.0%
!!! TGAATTTTTTATTTGCATTA+TGG + chr3_1:80416199-80416218 Msa0379330:intron 15.0%
!!! TTCTTTTTCTAGTTAAAATT+AGG + chr3_1:80416353-80416372 Msa0379330:intron 15.0%
!! AATGCTTCATAAAAAATAAT+TGG + chr3_1:80418441-80418460 Msa0379330:intron 15.0%
!!! ATTATATTCTAATTTTGAAG+CGG - chr3_1:80418495-80418514 None:intergenic 15.0%
!! AAAATTAGAATATAATTCAG+TGG + chr3_1:80418499-80418518 Msa0379330:intron 15.0%
!! ATATTGATAAAGTACATTAA+GGG - chr3_1:80418629-80418648 None:intergenic 15.0%
!! AATATTGATAAAGTACATTA+AGG - chr3_1:80418630-80418649 None:intergenic 15.0%
!!! AATGTACTTTATCAATATTT+TGG + chr3_1:80418631-80418650 Msa0379330:intron 15.0%
!!! AATCATGAATTTTAAAAAGT+TGG - chr3_1:80418817-80418836 None:intergenic 15.0%
!! TTGTATGATTAATATTACAA+AGG - chr3_1:80419081-80419100 None:intergenic 15.0%
!! TTGTAATATTAATCATACAA+AGG + chr3_1:80419081-80419100 Msa0379330:intron 15.0%
!! ATAAATGAATTATTTAAAGG+TGG - chr3_1:80420054-80420073 None:intergenic 15.0%
!!! TTTAAAGTTTCAAAGTTTTA+TGG + chr3_1:80420339-80420358 Msa0379330:intron 15.0%
!! AGTTATAAGATGTTATAAAT+TGG + chr3_1:80422142-80422161 Msa0379330:intron 15.0%
!!! TTTTTTTTCATTTATTTTGC+AGG + chr3_1:80422562-80422581 Msa0379330:intron 15.0%
!! TAAATTCAAATTGAAATACT+TGG - chr3_1:80422789-80422808 None:intergenic 15.0%
!! AGTATTTCAATTTGAATTTA+TGG + chr3_1:80422789-80422808 Msa0379330:intron 15.0%
!!! TGACATTAATTGTTAATTTT+TGG + chr3_1:80424270-80424289 Msa0379330:intron 15.0%
!!! GACATTAATTGTTAATTTTT+GGG + chr3_1:80424271-80424290 Msa0379330:intron 15.0%
!! ATAAAAATGTATTATCACTT+GGG - chr3_1:80424770-80424789 None:intergenic 15.0%
!! TATAAAAATGTATTATCACT+TGG - chr3_1:80424771-80424790 None:intergenic 15.0%
!!! TTTTTTTTTTTTGCGATTTA+CGG - chr3_1:80424974-80424993 None:intergenic 15.0%
!!! TTTGTTTTTATAAGCTATCT+TGG + chr3_1:80414090-80414109 Msa0379330:intron 20.0%
!! AAAGTTTCCTGAAAAAATAT+AGG - chr3_1:80414660-80414679 None:intergenic 20.0%
!! TCCTATTTATAAGAGAAAAT+TGG + chr3_1:80415105-80415124 Msa0379330:intron 20.0%
!! CCTATTTATAAGAGAAAATT+GGG + chr3_1:80415106-80415125 Msa0379330:intron 20.0%
!! CCTATTTATAAGAGAAAATT+GGG - chr3_1:80415106-80415125 None:intergenic 20.0%
!! TCCTATTTATAAGAGAAAAT+TGG - chr3_1:80415105-80415124 None:intergenic 20.0%
!!! ATTTTGCATTTTAGATATCT+TGG + chr3_1:80415553-80415572 Msa0379330:intron 20.0%
!!! TTGCATTTAAAATTTCTCAA+AGG + chr3_1:80415736-80415755 Msa0379330:CDS 20.0%
!! TTTCGTCGAAAATATATAAT+GGG - chr3_1:80415830-80415849 None:intergenic 20.0%
!!! TTTTCGTCGAAAATATATAA+TGG - chr3_1:80415831-80415850 None:intergenic 20.0%
!!! ATTATATATTTTCGACGAAA+AGG + chr3_1:80415830-80415849 Msa0379330:CDS 20.0%
!!! TGTTTTCAAATTTGAGATTT+TGG + chr3_1:80415926-80415945 Msa0379330:intron 20.0%
!!! TTTTAATTTAACCAACAGTT+TGG + chr3_1:80415962-80415981 Msa0379330:intron 20.0%
!!! GAATCATTAAAAGCATAAAA+TGG - chr3_1:80416591-80416610 None:intergenic 20.0%
!! TTTATTGAAACATTAACACT+AGG + chr3_1:80417043-80417062 Msa0379330:intron 20.0%
!!! TTTTAAGAATGCGTTAATTT+TGG - chr3_1:80417135-80417154 None:intergenic 20.0%
!! TAAATATTTAAATACGCTTC+TGG - chr3_1:80417167-80417186 None:intergenic 20.0%
!! AATTACTTAAACCCAAAAAA+AGG - chr3_1:80417473-80417492 None:intergenic 20.0%
!! TTTAAGTAATTATTGCCATT+AGG + chr3_1:80417482-80417501 Msa0379330:intron 20.0%
!!! AAATTTCTTATCCATGTTTT+TGG + chr3_1:80418000-80418019 Msa0379330:CDS 20.0%
!! TTACATAAATAAAAACTCAC+AGG - chr3_1:80418365-80418384 None:intergenic 20.0%
!! CATAAAAAATAATTGGTCAT+AGG + chr3_1:80418448-80418467 Msa0379330:intron 20.0%
!! GAAATTATTTATAAACCACA+AGG - chr3_1:80419858-80419877 None:intergenic 20.0%
!! AAAGAGAGTTTATAAACAAT+TGG - chr3_1:80420409-80420428 None:intergenic 20.0%
!!! TGATAAATGTATTCCATTTT+TGG + chr3_1:80420467-80420486 Msa0379330:intron 20.0%
!!! GATAAATGTATTCCATTTTT+GGG + chr3_1:80420468-80420487 Msa0379330:intron 20.0%
!! TATGGATGATAATATTTACA+TGG + chr3_1:80420810-80420829 Msa0379330:CDS 20.0%
!! TATGTGAGTAGAAATAAAAA+GGG + chr3_1:80421509-80421528 Msa0379330:intron 20.0%
!! TAACTAAATTTGTATTCTTG+AGG - chr3_1:80421553-80421572 None:intergenic 20.0%
!! TATAAGAAAATGCCATAAAT+AGG + chr3_1:80421575-80421594 Msa0379330:intron 20.0%
!! TTTGTATTCTATCCTATTTA+TGG - chr3_1:80421590-80421609 None:intergenic 20.0%
!!! AGAAATCAGAGAAATATTTT+GGG + chr3_1:80421838-80421857 Msa0379330:intron 20.0%
!!! TAATTTTAGAAACTGTTATG+TGG + chr3_1:80422927-80422946 Msa0379330:intron 20.0%
!!! TGATTGGTTAAAATTTACAT+CGG - chr3_1:80423347-80423366 None:intergenic 20.0%
!!! TAAATTTTAACCAATCAAAG+AGG + chr3_1:80423350-80423369 Msa0379330:intron 20.0%
!!! AAATTTTAACCAATCAAAGA+GGG + chr3_1:80423351-80423370 Msa0379330:intron 20.0%
!! TTTATTCTAGATCTGTTATT+GGG + chr3_1:80423782-80423801 Msa0379330:intron 20.0%
!!! TCTTTTCAATTTCATAATCA+AGG - chr3_1:80424170-80424189 None:intergenic 20.0%
!! ACATTAACAAATAACCAAAT+TGG - chr3_1:80424236-80424255 None:intergenic 20.0%
!!! TTTGGTTATTTGTTAATGTT+CGG + chr3_1:80424237-80424256 Msa0379330:intron 20.0%
!!! TTAATTTTTGGGTTTTTGAT+AGG + chr3_1:80424282-80424301 Msa0379330:intron 20.0%
!!! AATAAAAGGATATGGTTTTA+AGG - chr3_1:80424358-80424377 None:intergenic 20.0%
!! AATATTGGATATTTAATGAC+GGG - chr3_1:80424394-80424413 None:intergenic 20.0%
!! CAATATTGGATATTTAATGA+CGG - chr3_1:80424395-80424414 None:intergenic 20.0%
!!! CAAAACATTTTTGTTTGTAT+GGG - chr3_1:80424475-80424494 None:intergenic 20.0%
!!! TCTTTATTGTTTTTCATTGT+AGG + chr3_1:80424559-80424578 Msa0379330:intron 20.0%
!! AAATATTTAAATGCAGCAAA+TGG - chr3_1:80424723-80424742 None:intergenic 20.0%
!!! AGATATAACATTTTTTTCCT+TGG + chr3_1:80424938-80424957 Msa0379330:three_prime_UTR 20.0%
! GAAAGAAAGAAAAAAAAACG+CGG + chr3_1:80413489-80413508 Msa0379330:five_prime_UTR 25.0%
!! AAGTTCCATTTTAGATTTGA+TGG + chr3_1:80413592-80413611 Msa0379330:exon 25.0%
! AGAATCCATCAAATCTAAAA+TGG - chr3_1:80413600-80413619 None:intergenic 25.0%
!!! TTTTCCATATCGATTTGATA+AGG + chr3_1:80413786-80413805 Msa0379330:intron 25.0%
! TGATTCATCACATTAATCAA+CGG + chr3_1:80413854-80413873 Msa0379330:intron 25.0%
! TTTATACTATTGCCATAAAC+AGG - chr3_1:80413882-80413901 None:intergenic 25.0%
! ATAAAGCTATTTATCCTAAC+AGG - chr3_1:80413962-80413981 None:intergenic 25.0%
! TCAAATAAGTCAATCTAAAC+AGG + chr3_1:80414218-80414237 Msa0379330:intron 25.0%
! ACTTTAGCTGTTATAAATGA+CGG + chr3_1:80414300-80414319 Msa0379330:intron 25.0%
!! AATGCTAACATATTTGGAAT+CGG + chr3_1:80414526-80414545 Msa0379330:CDS 25.0%
! TTGTTACCATCAAAATGTAA+AGG - chr3_1:80414610-80414629 None:intergenic 25.0%
! TATGGAGTTAAAAAGTCATA+TGG + chr3_1:80414686-80414705 Msa0379330:intron 25.0%
!!! TCAACTCTTTGTTTTTGTAT+CGG + chr3_1:80414748-80414767 Msa0379330:CDS 25.0%
! AATAAATGACATCTCAATGA+AGG + chr3_1:80414833-80414852 Msa0379330:CDS 25.0%
! AATTCTTTAAATCTCTGTAC+CGG - chr3_1:80414888-80414907 None:intergenic 25.0%
!!! TTTTCCATTGTTTATTTTGC+TGG + chr3_1:80415014-80415033 Msa0379330:intron 25.0%
! AATTCCAGCAAAATAAACAA+TGG - chr3_1:80415021-80415040 None:intergenic 25.0%
!! TTTTCTCTTATAAATAGGAC+CGG - chr3_1:80415193-80415212 None:intergenic 25.0%
!! CCCAATTTTCTCTTATAAAT+AGG - chr3_1:80415188-80415207 None:intergenic 25.0%
!! CCCAATTTTCTCTTATAAAT+AGG + chr3_1:80415188-80415207 Msa0379330:intron 25.0%
!! TTTTCTCTTATAAATAGGAC+CGG + chr3_1:80415193-80415212 Msa0379330:intron 25.0%
!!! GTATTTCTCTTTTGAAAAAG+AGG + chr3_1:80415338-80415357 Msa0379330:intron 25.0%
!! AATTTTGAACCATCAAACAT+TGG + chr3_1:80415584-80415603 Msa0379330:intron 25.0%
! TGAAAACAAGAAAAACTGAA+AGG - chr3_1:80415914-80415933 None:intergenic 25.0%
!!! AGCATCTTTTTTACCTTTTA+CGG - chr3_1:80416174-80416193 None:intergenic 25.0%
! TAAGGCTTAAACTAAAAACA+AGG - chr3_1:80416286-80416305 None:intergenic 25.0%
! AAGCCTTAAACATAATTAGT+TGG + chr3_1:80416298-80416317 Msa0379330:intron 25.0%
! TAGCCAACTAATTATGTTTA+AGG - chr3_1:80416304-80416323 None:intergenic 25.0%
!! TATCCCCTTCATTAAATTTT+GGG - chr3_1:80416381-80416400 None:intergenic 25.0%
! AAAATTTAATGAAGGGGATA+GGG + chr3_1:80416381-80416400 Msa0379330:intron 25.0%
! AAATAGTTAAATGTCTACAG+AGG - chr3_1:80416774-80416793 None:intergenic 25.0%
!! GTAGACATTTAACTATTTTC+AGG + chr3_1:80416776-80416795 Msa0379330:intron 25.0%
!! TAGTTGAGTTTGATAATACT+TGG - chr3_1:80416867-80416886 None:intergenic 25.0%
! TTAATTATGCAGTAGTAGTA+CGG + chr3_1:80416904-80416923 Msa0379330:intron 25.0%
!!! ATTTTATGTAATTTGGTGCA+TGG + chr3_1:80417237-80417256 Msa0379330:intron 25.0%
!!! GATCTACATATCCTTTTTTT+GGG + chr3_1:80417459-80417478 Msa0379330:intron 25.0%
! TAACTTCGAATTTGTATGTT+TGG + chr3_1:80417730-80417749 Msa0379330:CDS 25.0%
! TGTTTAGAAAGAGAAATAAG+TGG + chr3_1:80417929-80417948 Msa0379330:CDS 25.0%
! TTTCCATAAATTATAGCTTC+TGG - chr3_1:80417960-80417979 None:intergenic 25.0%
! AGAAGCTATAATTTATGGAA+AGG + chr3_1:80417959-80417978 Msa0379330:CDS 25.0%
! GGATCATTTAGAAAATTAGA+AGG + chr3_1:80418520-80418539 Msa0379330:intron 25.0%
!! AGAAAATTAGAAGGATTTTC+TGG + chr3_1:80418529-80418548 Msa0379330:intron 25.0%
!! TGAGAATTTGTTTCTTACAA+GGG - chr3_1:80418591-80418610 None:intergenic 25.0%
!! ATGAGAATTTGTTTCTTACA+AGG - chr3_1:80418592-80418611 None:intergenic 25.0%
!!! CAAAGCATAGTTTTAAAACT+CGG - chr3_1:80419029-80419048 None:intergenic 25.0%
! TATTAATCATACAAAGGAGT+CGG + chr3_1:80419087-80419106 Msa0379330:intron 25.0%
! AAAATTTCTCTTCAAACAGT+CGG + chr3_1:80419145-80419164 Msa0379330:intron 25.0%
!! ACATTTTCCATTCTGTAAAT+AGG + chr3_1:80419338-80419357 Msa0379330:intron 25.0%
! AGATAAACCTATTTACAGAA+TGG - chr3_1:80419348-80419367 None:intergenic 25.0%
! TGTAAATAGGTTTATCTAGT+GGG + chr3_1:80419351-80419370 Msa0379330:intron 25.0%
! AATCCTATACCAATTTAAGT+TGG + chr3_1:80419606-80419625 Msa0379330:CDS 25.0%
!! ATCCTATACCAATTTAAGTT+GGG + chr3_1:80419607-80419626 Msa0379330:CDS 25.0%
! CATCGCTTAATTATCAAATA+TGG - chr3_1:80419800-80419819 None:intergenic 25.0%
! ATATTGAACGTGAATTAAAC+TGG + chr3_1:80420079-80420098 Msa0379330:CDS 25.0%
! ATAAAACTAAGTATACCACT+TGG - chr3_1:80420220-80420239 None:intergenic 25.0%
! TATCCTGTTTATCAAGAAAT+TGG - chr3_1:80420251-80420270 None:intergenic 25.0%
!!! TATAAACTCTCTTTTGACTT+TGG + chr3_1:80420415-80420434 Msa0379330:intron 25.0%
!!! GCTTCACATTTTTATTTGTA+TGG + chr3_1:80420519-80420538 Msa0379330:intron 25.0%
!!! TCACATTTTTATTTGTATGG+CGG + chr3_1:80420522-80420541 Msa0379330:intron 25.0%
! TAAGCTGCTAAATATAAATG+AGG + chr3_1:80420639-80420658 Msa0379330:CDS 25.0%
! TGAAGTTGGATGTAAATTTA+TGG - chr3_1:80421001-80421020 None:intergenic 25.0%
! TAAGCCATTTCTAATAAAGA+CGG - chr3_1:80421031-80421050 None:intergenic 25.0%
! TTATTAGAAATGGCTTACAT+TGG + chr3_1:80421034-80421053 Msa0379330:intron 25.0%
! TGTGGTATCATAATTTATCA+AGG + chr3_1:80421070-80421089 Msa0379330:intron 25.0%
! GTGGTATCATAATTTATCAA+GGG + chr3_1:80421071-80421090 Msa0379330:intron 25.0%
! TGGTATCATAATTTATCAAG+GGG + chr3_1:80421072-80421091 Msa0379330:intron 25.0%
! AAAATTAAACCCTACATGTA+GGG - chr3_1:80421184-80421203 None:intergenic 25.0%
! TTGGCTGAAAATCATAAAAA+TGG - chr3_1:80421237-80421256 None:intergenic 25.0%
!!! TTTTGTTATGAAGTCATTGT+TGG + chr3_1:80421318-80421337 Msa0379330:intron 25.0%
! GTATGTGAGTAGAAATAAAA+AGG + chr3_1:80421508-80421527 Msa0379330:intron 25.0%
!! CAGAAATCAGAGAAATATTT+TGG + chr3_1:80421837-80421856 Msa0379330:intron 25.0%
!!! TAGTTTTTGAAGTCAATTAG+TGG - chr3_1:80421874-80421893 None:intergenic 25.0%
!! TAATTGACTTCAAAAACTAC+CGG + chr3_1:80421875-80421894 Msa0379330:intron 25.0%
!!! TAGTTTTTGAAGTCAATTAG+TGG - chr3_1:80421874-80421893 None:intergenic 25.0%
!! TAATTGACTTCAAAAACTAC+TGG + chr3_1:80421875-80421894 Msa0379330:intron 25.0%
! TATGTGAGGAGAAATAAAAA+GGG + chr3_1:80422075-80422094 Msa0379330:intron 25.0%
! TAAATAATAGCTAGCTAACA+GGG + chr3_1:80422103-80422122 Msa0379330:intron 25.0%
! GATGTTATAAATTGGTGAAA+CGG + chr3_1:80422150-80422169 Msa0379330:intron 25.0%
! ATGTTATAAATTGGTGAAAC+GGG + chr3_1:80422151-80422170 Msa0379330:intron 25.0%
!! AGAGAGAATGTTTTCTTAAT+GGG - chr3_1:80422285-80422304 None:intergenic 25.0%
! TCTCTCTATATCTATATCTA+TGG + chr3_1:80422300-80422319 Msa0379330:intron 25.0%
!!! TTGTTTTAACCTTTTTCGAA+CGG + chr3_1:80422338-80422357 Msa0379330:intron 25.0%
! GTTTCAAAAATATCTTTGAG+TGG - chr3_1:80422497-80422516 None:intergenic 25.0%
! AAAACATTAGATTCCTTTCA+CGG - chr3_1:80422529-80422548 None:intergenic 25.0%
! ATTGGTATCAAGTCAAAAAT+AGG - chr3_1:80422592-80422611 None:intergenic 25.0%
! TGACTTGATACCAATTTATT+TGG + chr3_1:80422597-80422616 Msa0379330:CDS 25.0%
! CTAAACACATCCAAATAAAT+TGG - chr3_1:80422610-80422629 None:intergenic 25.0%
! ATTTATTTGGATGTGTTTAG+AGG + chr3_1:80422610-80422629 Msa0379330:CDS 25.0%
! GTTTATTCTAGATCTGTTAT+TGG + chr3_1:80423781-80423800 Msa0379330:intron 25.0%
!! AAAGCTCAAATTCTAAGAAA+TGG + chr3_1:80424023-80424042 Msa0379330:intron 25.0%
! AAAAGAAACTGATCTTTGTA+TGG + chr3_1:80424184-80424203 Msa0379330:intron 25.0%
! TGGAATTGAATAAAAGGATA+TGG - chr3_1:80424366-80424385 None:intergenic 25.0%
! GTGAAATGGAATTGAATAAA+AGG - chr3_1:80424372-80424391 None:intergenic 25.0%
! AAACACTATATAGGCAATAT+TGG - chr3_1:80424409-80424428 None:intergenic 25.0%
!!! GCAAAACATTTTTGTTTGTA+TGG - chr3_1:80424476-80424495 None:intergenic 25.0%
! TTGCTGCATTTAAATATTTC+CGG + chr3_1:80424724-80424743 Msa0379330:three_prime_UTR 25.0%
AAAATGAAAGCAAACGATGA+AGG - chr3_1:80413769-80413788 None:intergenic 30.0%
GATTCCTTATCAAATCGATA+TGG - chr3_1:80413793-80413812 None:intergenic 30.0%
!! TATCGATTTGATAAGGAATC+TGG + chr3_1:80413793-80413812 Msa0379330:intron 30.0%
TGTTTCATTCAAGTACACTT+TGG + chr3_1:80413822-80413841 Msa0379330:intron 30.0%
CTATTACAAAAGATAGCACA+AGG + chr3_1:80414041-80414060 Msa0379330:intron 30.0%
!!! TCTGGTTTTCTTCAATACAA+AGG + chr3_1:80414418-80414437 Msa0379330:CDS 30.0%
!!! GATCTGTCCTATATTTTTTC+AGG + chr3_1:80414650-80414669 Msa0379330:intron 30.0%
! TTTTGTATCGGAGATTATAC+CGG + chr3_1:80414760-80414779 Msa0379330:CDS 30.0%
TGTATAAAATGTATCCAGTG+TGG - chr3_1:80414793-80414812 None:intergenic 30.0%
! ACTGGATACATTTTATACAG+AGG + chr3_1:80414794-80414813 Msa0379330:CDS 30.0%
! CTGGATACATTTTATACAGA+GGG + chr3_1:80414795-80414814 Msa0379330:CDS 30.0%
TCAAGAAAACTTGATGTATC+TGG + chr3_1:80415129-80415148 Msa0379330:intron 30.0%
!! TCAACAAAAGTTGATGTATC+TGG - chr3_1:80415168-80415187 None:intergenic 30.0%
TAAAAAAGAGATACTACCTC+CGG - chr3_1:80415215-80415234 None:intergenic 30.0%
TAAAAAATGACCAGTTTACG+AGG + chr3_1:80415252-80415271 Msa0379330:intron 30.0%
ATCTTTACAAGAAAAAGCTG+GGG - chr3_1:80415463-80415482 None:intergenic 30.0%
CATCTTTACAAGAAAAAGCT+GGG - chr3_1:80415464-80415483 None:intergenic 30.0%
AGTAATCCTTCAATAAGCTA+GGG - chr3_1:80415997-80416016 None:intergenic 30.0%
AACATAATTAGTTGGCTACT+CGG + chr3_1:80416306-80416325 Msa0379330:intron 30.0%
! CTATCCCCTTCATTAAATTT+TGG - chr3_1:80416382-80416401 None:intergenic 30.0%
CAAAATTTAATGAAGGGGAT+AGG + chr3_1:80416380-80416399 Msa0379330:intron 30.0%
!!! ATCAGTTTTTTTTCCCCATT+GGG + chr3_1:80416454-80416473 Msa0379330:intron 30.0%
AACAGAACAACATATTTGCA+TGG - chr3_1:80416518-80416537 None:intergenic 30.0%
! ATTCAAAGCAAAGTTTTCTC+TGG + chr3_1:80416607-80416626 Msa0379330:intron 30.0%
!! TTCTCTGGAATTTGTAAGAT+TGG + chr3_1:80416622-80416641 Msa0379330:intron 30.0%
! GATTCAAGAGTCATTGTTTT+AGG - chr3_1:80416752-80416771 None:intergenic 30.0%
! TTTTAACATGACAAGAGTGA+AGG - chr3_1:80416990-80417009 None:intergenic 30.0%
!! GCTAATAGAATGTGTTGATT+TGG - chr3_1:80417021-80417040 None:intergenic 30.0%
TGAAACATTAACACTAGGAT+AGG + chr3_1:80417048-80417067 Msa0379330:intron 30.0%
! TTTTTCCAATTAAGCAAACC+TGG - chr3_1:80417075-80417094 None:intergenic 30.0%
TTTAAGAAAGTGAAACTGCA+TGG + chr3_1:80417108-80417127 Msa0379330:intron 30.0%
ACGCATTCTTAAAACTACAA+TGG + chr3_1:80417141-80417160 Msa0379330:intron 30.0%
CCTCTTGAGCATTAATTATT+TGG - chr3_1:80417291-80417310 None:intergenic 30.0%
CCAAATAATTAATGCTCAAG+AGG + chr3_1:80417288-80417307 Msa0379330:intron 30.0%
TGTCTTGCTTAATATTTGCT+AGG + chr3_1:80417313-80417332 Msa0379330:intron 30.0%
! TTGCTTAATATTTGCTAGGT+GGG + chr3_1:80417317-80417336 Msa0379330:intron 30.0%
!!! CGATCTACATATCCTTTTTT+TGG + chr3_1:80417458-80417477 Msa0379330:intron 30.0%
ACATTTATGTTTGCTTACAG+TGG + chr3_1:80417552-80417571 Msa0379330:intron 30.0%
!! GTGGCACTGTATTTTAAATT+TGG + chr3_1:80417667-80417686 Msa0379330:CDS 30.0%
CGAATTTGTATGTTTGGATA+TGG + chr3_1:80417736-80417755 Msa0379330:CDS 30.0%
! TAAGTTACTCTGATTTGTCA+AGG + chr3_1:80417864-80417883 Msa0379330:CDS 30.0%
CATCCAGAAGCTATAATTTA+TGG + chr3_1:80417954-80417973 Msa0379330:CDS 30.0%
AGCTATAATTTATGGAAAGG+TGG + chr3_1:80417962-80417981 Msa0379330:CDS 30.0%
!!! CTTATCCATGTTTTTGGATA+AGG + chr3_1:80418006-80418025 Msa0379330:CDS 30.0%
TCTATCCTTATCCAAAAACA+TGG - chr3_1:80418014-80418033 None:intergenic 30.0%
CATATTAGATCTCTCATATC+TGG - chr3_1:80418124-80418143 None:intergenic 30.0%
CAGATATGAGAGATCTAATA+TGG + chr3_1:80418122-80418141 Msa0379330:CDS 30.0%
TATGAGAGATCTAATATGGA+AGG + chr3_1:80418126-80418145 Msa0379330:CDS 30.0%
! TTTTCTGTTTATACATGTCC+AGG + chr3_1:80418220-80418239 Msa0379330:intron 30.0%
TTTCTGTTTATACATGTCCA+GGG + chr3_1:80418221-80418240 Msa0379330:intron 30.0%
TTGATAAAGTACATTAAGGG+AGG - chr3_1:80418626-80418645 None:intergenic 30.0%
!! CAATATTTTGGACCTGTATT+TGG + chr3_1:80418643-80418662 Msa0379330:intron 30.0%
! TGTAATTAGTCTCCAAATAC+AGG - chr3_1:80418658-80418677 None:intergenic 30.0%
AGACTAATTACAACAGTCTT+AGG + chr3_1:80418666-80418685 Msa0379330:intron 30.0%
TTAAAAAGTTGGAGCCTATA+GGG - chr3_1:80418806-80418825 None:intergenic 30.0%
TTTAAAAAGTTGGAGCCTAT+AGG - chr3_1:80418807-80418826 None:intergenic 30.0%
! AATTACATGACCGATTCATA+AGG + chr3_1:80418943-80418962 Msa0379330:intron 30.0%
!!! CGAGTTTTAAAACTATGCTT+TGG + chr3_1:80419027-80419046 Msa0379330:intron 30.0%
!!! GTTTTAAAACTATGCTTTGG+TGG + chr3_1:80419030-80419049 Msa0379330:intron 30.0%
CAGCAATTAGTAAAACATGA+TGG + chr3_1:80419113-80419132 Msa0379330:intron 30.0%
!! TCATTCTGAAATTATCTCGT+TGG + chr3_1:80419170-80419189 Msa0379330:intron 30.0%
AAGCAGAATCATAAGAAACA+TGG - chr3_1:80419238-80419257 None:intergenic 30.0%
TGAATGACTATACCAAAAAC+CGG - chr3_1:80419279-80419298 None:intergenic 30.0%
CTGTAAATAGGTTTATCTAG+TGG + chr3_1:80419350-80419369 Msa0379330:intron 30.0%
GTAAATAGGTTTATCTAGTG+GGG + chr3_1:80419352-80419371 Msa0379330:intron 30.0%
! GTTAAGATTTTTGTCGAAGA+AGG + chr3_1:80419384-80419403 Msa0379330:CDS 30.0%
AGTTAGATATGTACAGAAGA+TGG - chr3_1:80419471-80419490 None:intergenic 30.0%
GAAACATATTCCTAGTGTTA+TGG + chr3_1:80419556-80419575 Msa0379330:CDS 30.0%
ATCCCAACTTAAATTGGTAT+AGG - chr3_1:80419612-80419631 None:intergenic 30.0%
!! TATACCAATTTAAGTTGGGA+TGG + chr3_1:80419611-80419630 Msa0379330:CDS 30.0%
! TTTTCCATCCCAACTTAAAT+TGG - chr3_1:80419618-80419637 None:intergenic 30.0%
!! AATTTAAGTTGGGATGGAAA+AGG + chr3_1:80419617-80419636 Msa0379330:CDS 30.0%
TTGTTTGAGTATAGGAATAC+TGG + chr3_1:80419725-80419744 Msa0379330:CDS 30.0%
TGTTTGAGTATAGGAATACT+GGG + chr3_1:80419726-80419745 Msa0379330:CDS 30.0%
! TTTGATAATTAAGCGATGTG+AGG + chr3_1:80419802-80419821 Msa0379330:CDS 30.0%
! TTGATAATTAAGCGATGTGA+GGG + chr3_1:80419803-80419822 Msa0379330:CDS 30.0%
ACAATATTAAGAGAGTTGTG+TGG - chr3_1:80419921-80419940 None:intergenic 30.0%
GAATTATTTAAAGGTGGATG+TGG - chr3_1:80420048-80420067 None:intergenic 30.0%
AATCTTAACAAAGAAGAGGA+AGG + chr3_1:80420176-80420195 Msa0379330:CDS 30.0%
TCTCCAATTTCTTGATAAAC+AGG + chr3_1:80420245-80420264 Msa0379330:intron 30.0%
! TTATGGCTTTTCCTGATTAA+AGG + chr3_1:80420356-80420375 Msa0379330:intron 30.0%
!!! ATTAAAGGAAGTGCTACTTT+TGG + chr3_1:80420371-80420390 Msa0379330:intron 30.0%
TGGAATACATTTATCATGCA+TGG - chr3_1:80420463-80420482 None:intergenic 30.0%
!! CACATTTTTATTTGTATGGC+GGG + chr3_1:80420523-80420542 Msa0379330:intron 30.0%
!! ATTTTCTCAATCAGTTTGCT+AGG - chr3_1:80420592-80420611 None:intergenic 30.0%
TAGAAAGATCACTGAAATCA+AGG - chr3_1:80420948-80420967 None:intergenic 30.0%
TGATTTCAGTGATCTTTCTA+TGG + chr3_1:80420948-80420967 Msa0379330:CDS 30.0%
GATTTCAGTGATCTTTCTAT+GGG + chr3_1:80420949-80420968 Msa0379330:CDS 30.0%
TGGATGTAAATTTATGGAAC+AGG - chr3_1:80420995-80421014 None:intergenic 30.0%
ATACCCGTCTTTATTAGAAA+TGG + chr3_1:80421024-80421043 Msa0379330:intron 30.0%
AAGCCATTTCTAATAAAGAC+GGG - chr3_1:80421030-80421049 None:intergenic 30.0%
ATAATCTTGCAGATACTGAA+AGG - chr3_1:80421098-80421117 None:intergenic 30.0%
!! GTTTTCTTTAAAGAAGAGCA+AGG + chr3_1:80421144-80421163 Msa0379330:intron 30.0%
AAATTAAACCCTACATGTAG+GGG - chr3_1:80421183-80421202 None:intergenic 30.0%
GAAAATTAAACCCTACATGT+AGG - chr3_1:80421185-80421204 None:intergenic 30.0%
GAAAATCATAAAAATGGTGG+AGG - chr3_1:80421231-80421250 None:intergenic 30.0%
GCTGAAAATCATAAAAATGG+TGG - chr3_1:80421234-80421253 None:intergenic 30.0%
ATTACATGCAGAACATCATT+TGG - chr3_1:80421256-80421275 None:intergenic 30.0%
ACATACACTTTCTTAATGAG+TGG - chr3_1:80421369-80421388 None:intergenic 30.0%
ATAGGATAAAAGGGAATTTG+TGG + chr3_1:80421638-80421657 Msa0379330:intron 30.0%
TAGGATAAAAGGGAATTTGT+GGG + chr3_1:80421639-80421658 Msa0379330:intron 30.0%
GGTGTTAAAATCGGAAATAA+CGG + chr3_1:80421666-80421685 Msa0379330:intron 30.0%
!!! TACCGGTTCATTATTGTTTT+GGG + chr3_1:80421892-80421911 Msa0379330:intron 30.0%
TTCCCAAAACAATAATGAAC+CGG - chr3_1:80421897-80421916 None:intergenic 30.0%
!!! TGTTTTGGGAAAAATGTTTC+TGG + chr3_1:80421906-80421925 Msa0379330:intron 30.0%
ATCATCATTAACCCTTTGTT+TGG + chr3_1:80421936-80421955 Msa0379330:intron 30.0%
AAACATCATAGCCAAACAAA+GGG - chr3_1:80421950-80421969 None:intergenic 30.0%
TAAACATCATAGCCAAACAA+AGG - chr3_1:80421951-80421970 None:intergenic 30.0%
CAAATATCATTGGCAAACTT+GGG - chr3_1:80422029-80422048 None:intergenic 30.0%
TCAAATATCATTGGCAAACT+TGG - chr3_1:80422030-80422049 None:intergenic 30.0%
GGTCTACTATCAAATATCAT+TGG - chr3_1:80422039-80422058 None:intergenic 30.0%
GTATGTGAGGAGAAATAAAA+AGG + chr3_1:80422074-80422093 Msa0379330:intron 30.0%
GTAAATAATAGCTAGCTAAC+AGG + chr3_1:80422102-80422121 Msa0379330:intron 30.0%
!! AATGTTTTCTTAATGGGTCT+TGG - chr3_1:80422279-80422298 None:intergenic 30.0%
! GAGAGAGAATGTTTTCTTAA+TGG - chr3_1:80422286-80422305 None:intergenic 30.0%
AGATTTGAGAGATAAACAGA+TGG - chr3_1:80422410-80422429 None:intergenic 30.0%
AATTCATAAGTGACTCCATT+TGG + chr3_1:80422451-80422470 Msa0379330:intron 30.0%
AAACATATTATTGCCGTGAA+AGG + chr3_1:80422513-80422532 Msa0379330:intron 30.0%
! AGTTACAAACTTCCTTTTTC+TGG + chr3_1:80422664-80422683 Msa0379330:CDS 30.0%
TTTGATATGTTGCCAGAAAA+AGG - chr3_1:80422679-80422698 None:intergenic 30.0%
ATATACCTATAACCCTGATA+AGG + chr3_1:80422833-80422852 Msa0379330:intron 30.0%
!!! CAATAGATCTAAGTTGGTTT+TGG - chr3_1:80422866-80422885 None:intergenic 30.0%
TGAACAGACATAATCTCTTA+AGG + chr3_1:80423148-80423167 Msa0379330:intron 30.0%
TGCTTTAATAATGTGTACCT+TGG + chr3_1:80423200-80423219 Msa0379330:intron 30.0%
TCTAACATTAAACAACACCA+AGG - chr3_1:80423220-80423239 None:intergenic 30.0%
CGGACCTACAAAATTTATAT+GGG - chr3_1:80423327-80423346 None:intergenic 30.0%
TCGGACCTACAAAATTTATA+TGG - chr3_1:80423328-80423347 None:intergenic 30.0%
TCAACTACTAATACCTAGTT+GGG - chr3_1:80423491-80423510 None:intergenic 30.0%
TAACAATCACAAAACAAGGT+GGG - chr3_1:80423574-80423593 None:intergenic 30.0%
TTAACAATCACAAAACAAGG+TGG - chr3_1:80423575-80423594 None:intergenic 30.0%
GAGTTAACAATCACAAAACA+AGG - chr3_1:80423578-80423597 None:intergenic 30.0%
AACTAAGTTTCTATTGATGC+TGG + chr3_1:80423622-80423641 Msa0379330:intron 30.0%
TCTAACTTCTAAGCAAGATA+AGG + chr3_1:80423848-80423867 Msa0379330:intron 30.0%
!! GCAAGATAAGGTATTGTTAT+TGG + chr3_1:80423860-80423879 Msa0379330:intron 30.0%
!!! TCATCTATTGAACTAGCTTT+TGG + chr3_1:80423984-80424003 Msa0379330:intron 30.0%
!!! CATCTATTGAACTAGCTTTT+GGG + chr3_1:80423985-80424004 Msa0379330:intron 30.0%
!!! AGGTTTACTGACTTTTCTTT+TGG + chr3_1:80424210-80424229 Msa0379330:intron 30.0%
AGTAAAATAGCATGGAATAG+AGG - chr3_1:80424331-80424350 None:intergenic 30.0%
AAGGTATGAGTAAAATAGCA+TGG - chr3_1:80424339-80424358 None:intergenic 30.0%
!! ATATTTAATGACGGGTGAAA+TGG - chr3_1:80424386-80424405 None:intergenic 30.0%
ACTCACATCAAACACTATAT+AGG - chr3_1:80424418-80424437 None:intergenic 30.0%
TTTACGGTTAATTTAAGCCA+AGG - chr3_1:80424958-80424977 None:intergenic 30.0%
!! AATCACTTTTGCCTATGTGA+TGG + chr3_1:80413413-80413432 Msa0379330:five_prime_UTR 35.0%
GAAAAAAAAACGCGGTTAAG+AGG + chr3_1:80413497-80413516 Msa0379330:five_prime_UTR 35.0%
AATTGAGCAGAGGATTTCAT+CGG - chr3_1:80413690-80413709 None:intergenic 35.0%
TAATCAACGGAACCTGTTTA+TGG + chr3_1:80413867-80413886 Msa0379330:intron 35.0%
TGATTGATTACGATCCTGTT+AGG + chr3_1:80413945-80413964 Msa0379330:intron 35.0%
TATCCAATGAAGAACCACTA+TGG + chr3_1:80414368-80414387 Msa0379330:CDS 35.0%
TTCTTCAATACAAAGGCTCT+TGG + chr3_1:80414425-80414444 Msa0379330:CDS 35.0%
ATAGGACAGATCAGATTCTT+AGG - chr3_1:80414642-80414661 None:intergenic 35.0%
!! TCAGGAAACTTTTTGCTGTA+TGG + chr3_1:80414668-80414687 Msa0379330:intron 35.0%
! GATACATTTTATACAGAGGG+TGG + chr3_1:80414798-80414817 Msa0379330:CDS 35.0%
CAAGTATGACATGAAGAAAC+CGG + chr3_1:80414866-80414885 Msa0379330:CDS 35.0%
! ATAAACTTTTCCCCTCTTGT+TGG + chr3_1:80414923-80414942 Msa0379330:intron 35.0%
GGAAGACAGCTCAAAATTAA+TGG - chr3_1:80414966-80414985 None:intergenic 35.0%
! TTAATTTTGAGCTGTCTTCC+TGG + chr3_1:80414966-80414985 Msa0379330:intron 35.0%
AACAATGGAAAATAGAGCTC+AGG - chr3_1:80415006-80415025 None:intergenic 35.0%
TGTGAAAGAAATGAATGCTG+TGG + chr3_1:80415043-80415062 Msa0379330:intron 35.0%
!!! ACGTTTTAAAGTCAACACAC+TGG - chr3_1:80415278-80415297 None:intergenic 35.0%
!! AGTGTGTTGACTTTAAAACG+TGG + chr3_1:80415277-80415296 Msa0379330:intron 35.0%
!! TCTTGATCTCTGAAGCATTT+GGG + chr3_1:80415419-80415438 Msa0379330:intron 35.0%
CCATCTTTACAAGAAAAAGC+TGG - chr3_1:80415465-80415484 None:intergenic 35.0%
!! CCAGCTTTTTCTTGTAAAGA+TGG + chr3_1:80415462-80415481 Msa0379330:intron 35.0%
ACTATAACCCAACTACACAA+AGG - chr3_1:80415531-80415550 None:intergenic 35.0%
TTTGAACCATCAAACATTGG+TGG + chr3_1:80415587-80415606 Msa0379330:intron 35.0%
AGAAAACCACCAATGTTTGA+TGG - chr3_1:80415596-80415615 None:intergenic 35.0%
GATCAGCTGTTACAAAACTA+TGG + chr3_1:80415708-80415727 Msa0379330:CDS 35.0%
! GAACTTCATGGAGATCTTTT+TGG - chr3_1:80415766-80415785 None:intergenic 35.0%
AAAGATCTCCATGAAGTTCA+AGG + chr3_1:80415767-80415786 Msa0379330:CDS 35.0%
GACATAATCCTTGAACTTCA+TGG - chr3_1:80415778-80415797 None:intergenic 35.0%
CAAGGATTATGTCTCATACA+TGG + chr3_1:80415785-80415804 Msa0379330:CDS 35.0%
!! AGGGAAGAGCATTATTGAAA+CGG - chr3_1:80415875-80415894 None:intergenic 35.0%
AAAACTGAAAGGAGTAGTGT+GGG - chr3_1:80415903-80415922 None:intergenic 35.0%
AAAAACTGAAAGGAGTAGTG+TGG - chr3_1:80415904-80415923 None:intergenic 35.0%
GTAATCCTTCAATAAGCTAG+GGG - chr3_1:80415996-80416015 None:intergenic 35.0%
CAGTAATCCTTCAATAAGCT+AGG - chr3_1:80415998-80416017 None:intergenic 35.0%
AGGTCTTCTTGAAAAAGATG+AGG - chr3_1:80416025-80416044 None:intergenic 35.0%
! CTGTATCTAAGATATCGAAG+AGG - chr3_1:80416045-80416064 None:intergenic 35.0%
ATTATAAGCCACCTATAGGA+TGG - chr3_1:80416076-80416095 None:intergenic 35.0%
TCCTATAGGTGGCTTATAAT+TGG + chr3_1:80416076-80416095 Msa0379330:CDS 35.0%
TCCAATTATAAGCCACCTAT+AGG - chr3_1:80416080-80416099 None:intergenic 35.0%
!!! TGGTTTTGAATCATGTAGCT+TGG + chr3_1:80416219-80416238 Msa0379330:intron 35.0%
AGATACCATGTAAACAGTCA+TGG - chr3_1:80416246-80416265 None:intergenic 35.0%
AGGCTCCCAAAATTTAATGA+AGG + chr3_1:80416373-80416392 Msa0379330:intron 35.0%
GGCTCCCAAAATTTAATGAA+GGG + chr3_1:80416374-80416393 Msa0379330:intron 35.0%
GCTCCCAAAATTTAATGAAG+GGG + chr3_1:80416375-80416394 Msa0379330:intron 35.0%
!!! CATCAGTTTTTTTTCCCCAT+TGG + chr3_1:80416453-80416472 Msa0379330:intron 35.0%
!! GAGAGTGCTAATATCTTGTT+AGG + chr3_1:80416683-80416702 Msa0379330:intron 35.0%
! CTTGCTTAATATTTGCTAGG+TGG + chr3_1:80417316-80417335 Msa0379330:intron 35.0%
GTGCATGTTAATGAAGAAGA+TGG + chr3_1:80417378-80417397 Msa0379330:CDS 35.0%
CAATGTAGTTGACATCCTAA+TGG - chr3_1:80417500-80417519 None:intergenic 35.0%
TTTATGTTTGCTTACAGTGG+TGG + chr3_1:80417555-80417574 Msa0379330:intron 35.0%
GGTAGTTGTGTACATTCAAT+TGG - chr3_1:80417617-80417636 None:intergenic 35.0%
ATTGAATGTACACAACTACC+TGG + chr3_1:80417617-80417636 Msa0379330:CDS 35.0%
! GTCTACATCTTTCAGAGTTT+TGG - chr3_1:80417903-80417922 None:intergenic 35.0%
! TGGTTTTTGAATCCAAAGCT+TGG - chr3_1:80418104-80418123 None:intergenic 35.0%
!! TGAAGGCACAAATTTTTGAC+AGG - chr3_1:80418286-80418305 None:intergenic 35.0%
AGCGGTCATCAATATTGTTT+GGG - chr3_1:80418477-80418496 None:intergenic 35.0%
AAGCGGTCATCAATATTGTT+TGG - chr3_1:80418478-80418497 None:intergenic 35.0%
AGTCTCGATGCAAATATGAA+AGG - chr3_1:80418721-80418740 None:intergenic 35.0%
CTAGAACAAGTTACCTTTGT+AGG + chr3_1:80418739-80418758 Msa0379330:intron 35.0%
AACAAGTTACCTTTGTAGGA+AGG + chr3_1:80418743-80418762 Msa0379330:intron 35.0%
CCGGTATAACATTAAATGCA+CGG - chr3_1:80418851-80418870 None:intergenic 35.0%
CCGTGCATTTAATGTTATAC+CGG + chr3_1:80418848-80418867 Msa0379330:intron 35.0%
AAGGCATAAAGATAGTATGC+AGG - chr3_1:80419062-80419081 None:intergenic 35.0%
TAGCATATCATGCCAAGTTA+TGG - chr3_1:80419202-80419221 None:intergenic 35.0%
TTTGAATTCTGACATGAGAC+CGG + chr3_1:80419257-80419276 Msa0379330:intron 35.0%
TAGGAATATGTTTCCTGAGA+GGG - chr3_1:80419550-80419569 None:intergenic 35.0%
TTGCTCTTCAAAATGACACT+GGG - chr3_1:80419647-80419666 None:intergenic 35.0%
ATTGCTCTTCAAAATGACAC+TGG - chr3_1:80419648-80419667 None:intergenic 35.0%
GCAAGCAATTGTTTGAGTAT+AGG + chr3_1:80419717-80419736 Msa0379330:CDS 35.0%
TGATAATTAAGCGATGTGAG+GGG + chr3_1:80419804-80419823 Msa0379330:CDS 35.0%
TTCAAATTTCCTACTTCTGC+AGG + chr3_1:80419895-80419914 Msa0379330:intron 35.0%
AATCAAACAATGCAGCAGAA+TGG + chr3_1:80420139-80420158 Msa0379330:CDS 35.0%
ATCAAACAATGCAGCAGAAT+GGG + chr3_1:80420140-80420159 Msa0379330:CDS 35.0%
CCTCTTCTTTGTTAAGATTC+TGG - chr3_1:80420175-80420194 None:intergenic 35.0%
CCAGAATCTTAACAAAGAAG+AGG + chr3_1:80420172-80420191 Msa0379330:CDS 35.0%
AAGTATACCACTTGGTCAAA+CGG - chr3_1:80420212-80420231 None:intergenic 35.0%
GATAGTTCAAGAATGAGAGA+GGG + chr3_1:80420267-80420286 Msa0379330:intron 35.0%
ATAGTTCAAGAATGAGAGAG+GGG + chr3_1:80420268-80420287 Msa0379330:intron 35.0%
AAGTAGCACTTCCTTTAATC+AGG - chr3_1:80420370-80420389 None:intergenic 35.0%
CTTCGTACTAAAACTTTGCA+GGG + chr3_1:80420555-80420574 Msa0379330:intron 35.0%
TTCGTACTAAAACTTTGCAG+GGG + chr3_1:80420556-80420575 Msa0379330:intron 35.0%
!! TCAATCAGTTTGCTAGGAAT+TGG - chr3_1:80420586-80420605 None:intergenic 35.0%
AGCAGCTTAGATAAATCAGA+TGG - chr3_1:80420628-80420647 None:intergenic 35.0%
TGACTTCAGAATTTCTCAAG+TGG + chr3_1:80420751-80420770 Msa0379330:intron 35.0%
TTGGATACACACTGACATTA+TGG + chr3_1:80420792-80420811 Msa0379330:CDS 35.0%
AAAGATCACTGAAATCAAGG+AGG - chr3_1:80420945-80420964 None:intergenic 35.0%
TGGAACAGGTAGAAAAGAAA+AGG - chr3_1:80420981-80421000 None:intergenic 35.0%
ATTGGAATGTTGTCATGATG+TGG + chr3_1:80421052-80421071 Msa0379330:intron 35.0%
! TAAAAATGGTGGAGGAAGAA+AGG - chr3_1:80421223-80421242 None:intergenic 35.0%
ATTCTCCCCAATGTCAATTT+GGG + chr3_1:80421452-80421471 Msa0379330:intron 35.0%
AGGATAAAAGGGAATTTGTG+GGG + chr3_1:80421640-80421659 Msa0379330:intron 35.0%
AACTATTACCAGTTGAGAAC+TGG - chr3_1:80421807-80421826 None:intergenic 35.0%
!!! CTACCGGTTCATTATTGTTT+TGG + chr3_1:80421891-80421910 Msa0379330:intron 35.0%
!! GGGAAAAATGTTTCTGGTTT+AGG + chr3_1:80421912-80421931 Msa0379330:intron 35.0%
ACATACACTCTCTTAATGAG+TGG - chr3_1:80422060-80422079 None:intergenic 35.0%
! TCATTAAGAGAGTGTATGTG+AGG + chr3_1:80422061-80422080 Msa0379330:intron 35.0%
CAGATGAAACGTAAATCTTG+AGG - chr3_1:80422245-80422264 None:intergenic 35.0%
!!! TTTTAACCTTTTTCGAACGG+AGG + chr3_1:80422341-80422360 Msa0379330:intron 35.0%
AAACAGATGGAAGTAAAGCA+AGG - chr3_1:80422397-80422416 None:intergenic 35.0%
ATCTTTGAGTGGAGTCTAAA+AGG - chr3_1:80422486-80422505 None:intergenic 35.0%
ACCAACTTAGATCTATTGTC+TGG + chr3_1:80422868-80422887 Msa0379330:intron 35.0%
TCCAGACAATAGATCTAAGT+TGG - chr3_1:80422872-80422891 None:intergenic 35.0%
! AAGTCCATTCTAGGAAACTT+TGG + chr3_1:80422892-80422911 Msa0379330:intron 35.0%
AAGACCAAAGTTTCCTAGAA+TGG - chr3_1:80422899-80422918 None:intergenic 35.0%
TACCCCACTAATAAATACGA+CGG - chr3_1:80423089-80423108 None:intergenic 35.0%
AGACATAATCTCTTAAGGAG+TGG + chr3_1:80423153-80423172 Msa0379330:intron 35.0%
! ACTAATCAAAGAGAGTGTGT+TGG - chr3_1:80423269-80423288 None:intergenic 35.0%
! GGGTCCCATATAAATTTTGT+AGG + chr3_1:80423320-80423339 Msa0379330:intron 35.0%
TTCAACATACCCTCTTTGAT+TGG - chr3_1:80423363-80423382 None:intergenic 35.0%
TTAGTGTTCTATCATATGCC+AGG + chr3_1:80423442-80423461 Msa0379330:intron 35.0%
TAGTGTTCTATCATATGCCA+GGG + chr3_1:80423443-80423462 Msa0379330:intron 35.0%
AATAAGCATGACTATTTCCC+TGG - chr3_1:80423463-80423482 None:intergenic 35.0%
CTCAACTACTAATACCTAGT+TGG - chr3_1:80423492-80423511 None:intergenic 35.0%
!! AACACCAAAAGTTAGCTCTA+GGG - chr3_1:80423722-80423741 None:intergenic 35.0%
TCTTGCTTAGAAGTTAGAAC+TGG - chr3_1:80423846-80423865 None:intergenic 35.0%
! ACTCTAGAGGATTAGACATA+TGG - chr3_1:80423893-80423912 None:intergenic 35.0%
!! TATGTCTAATCCTCTAGAGT+AGG + chr3_1:80423893-80423912 Msa0379330:intron 35.0%
! GAGTATTGCTCAACCTTATA+AGG - chr3_1:80423966-80423985 None:intergenic 35.0%
!!! TAGCTTTTGGGATTGAGTTT+AGG + chr3_1:80423997-80424016 Msa0379330:intron 35.0%
! GACTTTTCTTTTGGCCAATT+TGG + chr3_1:80424219-80424238 Msa0379330:intron 35.0%
TTTGCATGACGATAATGTCT+TGG + chr3_1:80424593-80424612 Msa0379330:CDS 35.0%
TTGCATGACGATAATGTCTT+GGG + chr3_1:80424594-80424613 Msa0379330:CDS 35.0%
!!! TGGGAGCTATTTTTAGCATA+TGG + chr3_1:80424613-80424632 Msa0379330:CDS 35.0%
!!! GGGAGCTATTTTTAGCATAT+GGG + chr3_1:80424614-80424633 Msa0379330:CDS 35.0%
GGAGAGTTGAACAATTACAA+AGG + chr3_1:80424687-80424706 Msa0379330:CDS 35.0%
TCTTCTTAAGCGCTTTCTGT+CGG - chr3_1:80413471-80413490 None:intergenic 40.0%
ATTGAGCAGAGGATTTCATC+GGG - chr3_1:80413689-80413708 None:intergenic 40.0%
!!! GTTCATAAGCTGCTGTTTTC+AGG - chr3_1:80414133-80414152 None:intergenic 40.0%
CTTACAAGTGCTTATGCGTT+AGG + chr3_1:80414190-80414209 Msa0379330:intron 40.0%
! TAAAGTGCTCAAGAGCTATG+TGG - chr3_1:80414286-80414305 None:intergenic 40.0%
CATCCATAGTGGTTCTTCAT+TGG - chr3_1:80414374-80414393 None:intergenic 40.0%
TGGATGACTCTATGCCTAAA+AGG + chr3_1:80414388-80414407 Msa0379330:CDS 40.0%
ATGACTCTATGCCTAAAAGG+AGG + chr3_1:80414391-80414410 Msa0379330:CDS 40.0%
AATGTAAAGGCTGCTGTCTA+TGG - chr3_1:80414597-80414616 None:intergenic 40.0%
! CAGCAGCCTTTACATTTTGA+TGG + chr3_1:80414601-80414620 Msa0379330:CDS 40.0%
AACAAAGAGTTGAATCCTGC+AGG - chr3_1:80414741-80414760 None:intergenic 40.0%
AAGAGGGGAAAAGTTTATGC+GGG - chr3_1:80414921-80414940 None:intergenic 40.0%
CAAGAGGGGAAAAGTTTATG+CGG - chr3_1:80414922-80414941 None:intergenic 40.0%
TGAAACAGAACCAACAAGAG+GGG - chr3_1:80414936-80414955 None:intergenic 40.0%
CTGAAACAGAACCAACAAGA+GGG - chr3_1:80414937-80414956 None:intergenic 40.0%
ACTGAAACAGAACCAACAAG+AGG - chr3_1:80414938-80414957 None:intergenic 40.0%
! CAGGATATTTTCTTTTCGCC+AGG - chr3_1:80414987-80415006 None:intergenic 40.0%
GTGATACAAAATACTCCCTC+CGG + chr3_1:80415082-80415101 Msa0379330:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr3_1:80415197-80415216 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr3_1:80415196-80415215 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr3_1:80415196-80415215 Msa0379330:intron 40.0%
!! CTCTTGATCTCTGAAGCATT+TGG + chr3_1:80415418-80415437 Msa0379330:intron 40.0%
TAACCCAACTACACAAAGGA+CGG - chr3_1:80415527-80415546 None:intergenic 40.0%
! TTTTGATGAATCACACCCTC+AGG + chr3_1:80415632-80415651 Msa0379330:intron 40.0%
!! TAAATGGACTGGCGAATACA+TGG + chr3_1:80415661-80415680 Msa0379330:CDS 40.0%
!! GGGAAGAGCATTATTGAAAC+GGG - chr3_1:80415874-80415893 None:intergenic 40.0%
AAACTGAAAGGAGTAGTGTG+GGG - chr3_1:80415902-80415921 None:intergenic 40.0%
CAGATAAACGACCATCCTAT+AGG + chr3_1:80416062-80416081 Msa0379330:CDS 40.0%
ATAAACGACCATCCTATAGG+TGG + chr3_1:80416065-80416084 Msa0379330:CDS 40.0%
ATAATTGGACCACAGAGATC+TGG + chr3_1:80416091-80416110 Msa0379330:CDS 40.0%
GCATGGAATACTCTTCTTTC+TGG + chr3_1:80416148-80416167 Msa0379330:CDS 40.0%
TTGGACCATGACTGTTTACA+TGG + chr3_1:80416238-80416257 Msa0379330:intron 40.0%
GACTGTTTACATGGTATCTG+AGG + chr3_1:80416247-80416266 Msa0379330:intron 40.0%
!! TTTGAGCATTGAGACTCACT+AGG + chr3_1:80416418-80416437 Msa0379330:intron 40.0%
!! TTGAGCATTGAGACTCACTA+GGG + chr3_1:80416419-80416438 Msa0379330:intron 40.0%
TAGCACTCTCAGTCTAAAAG+TGG - chr3_1:80416673-80416692 None:intergenic 40.0%
ATAATGTACCACCCGTGAAT+AGG + chr3_1:80416952-80416971 Msa0379330:intron 40.0%
ATTAACACTAGGATAGGACC+AGG + chr3_1:80417054-80417073 Msa0379330:intron 40.0%
! TAGGACCAGGTTTGCTTAAT+TGG + chr3_1:80417067-80417086 Msa0379330:intron 40.0%
!! AAAAGTGCCTTTAGGTGTGA+CGG + chr3_1:80417356-80417375 Msa0379330:CDS 40.0%
GGAACATAAATTGTCTCTCC+AGG - chr3_1:80417638-80417657 None:intergenic 40.0%
GAGACAATTTATGTTCCGAG+TGG + chr3_1:80417641-80417660 Msa0379330:CDS 40.0%
CAATTTATGTTCCGAGTGGA+TGG + chr3_1:80417645-80417664 Msa0379330:CDS 40.0%
ACTCCTTTATGACGATAACC+AGG - chr3_1:80417764-80417783 None:intergenic 40.0%
! GAGACCACTACAATTTTGAG+TGG + chr3_1:80418032-80418051 Msa0379330:CDS 40.0%
AGCTCCACTCAAAATTGTAG+TGG - chr3_1:80418039-80418058 None:intergenic 40.0%
!! CTACAATTTTGAGTGGAGCT+CGG + chr3_1:80418039-80418058 Msa0379330:CDS 40.0%
!! TACAATTTTGAGTGGAGCTC+GGG + chr3_1:80418040-80418059 Msa0379330:CDS 40.0%
GTAATTAGACCAGTGTGAAC+CGG - chr3_1:80418929-80418948 None:intergenic 40.0%
! TACATGACCGATTCATAAGG+TGG + chr3_1:80418946-80418965 Msa0379330:intron 40.0%
!!! TTTTAAAACTCGGCTCGAAC+CGG - chr3_1:80419019-80419038 None:intergenic 40.0%
! GATTTTTGTCGAAGAAGGAC+TGG + chr3_1:80419389-80419408 Msa0379330:CDS 40.0%
!! GAAGCATCGCTTTATGGTTT+AGG + chr3_1:80419411-80419430 Msa0379330:CDS 40.0%
AGGAATATGTTTCCTGAGAG+GGG - chr3_1:80419549-80419568 None:intergenic 40.0%
CTAGGAATATGTTTCCTGAG+AGG - chr3_1:80419551-80419570 None:intergenic 40.0%
TTCAAGATAAACAACCCCAC+TGG - chr3_1:80419582-80419601 None:intergenic 40.0%
GTATAGGAATACTGGGATTC+CGG + chr3_1:80419733-80419752 Msa0379330:CDS 40.0%
TAGCCGGTAACTCAAGTATA+TGG + chr3_1:80419774-80419793 Msa0379330:CDS 40.0%
TGGCCATATACTTGAGTTAC+CGG - chr3_1:80419780-80419799 None:intergenic 40.0%
! ACTTGTAAGTGTTGTCCTTG+TGG + chr3_1:80419840-80419859 Msa0379330:intron 40.0%
GTGGGAAGATACAACAAACT+TGG + chr3_1:80419981-80420000 Msa0379330:CDS 40.0%
GATGTGGTAAAAGATGAAGG+TGG - chr3_1:80420032-80420051 None:intergenic 40.0%
GTGGATGTGGTAAAAGATGA+AGG - chr3_1:80420035-80420054 None:intergenic 40.0%
! ACGTGAATTAAACTGGTCTG+AGG + chr3_1:80420086-80420105 Msa0379330:CDS 40.0%
! TTAAACTGGTCTGAGGTGAA+AGG + chr3_1:80420093-80420112 Msa0379330:CDS 40.0%
TCAAACAATGCAGCAGAATG+GGG + chr3_1:80420141-80420160 Msa0379330:CDS 40.0%
GGATAGTTCAAGAATGAGAG+AGG + chr3_1:80420266-80420285 Msa0379330:intron 40.0%
!!! TTCCATTTTTGGGTTTGCCT+TGG + chr3_1:80420478-80420497 Msa0379330:intron 40.0%
!! GTTTTAGTACGAAGCATCAG+AGG - chr3_1:80420549-80420568 None:intergenic 40.0%
GCTTCGTACTAAAACTTTGC+AGG + chr3_1:80420554-80420573 Msa0379330:intron 40.0%
CTGAAATCAAGGAGGTAACT+AGG - chr3_1:80420937-80420956 None:intergenic 40.0%
TGTTATTGACCCCTACATGT+AGG + chr3_1:80421171-80421190 Msa0379330:intron 40.0%
GTTATTGACCCCTACATGTA+GGG + chr3_1:80421172-80421191 Msa0379330:intron 40.0%
AGAAAGGAAGTGACGATCAT+AGG - chr3_1:80421207-80421226 None:intergenic 40.0%
TGCAGTCAATATGCATCTCA+AGG - chr3_1:80421344-80421363 None:intergenic 40.0%
GATTCTCCCCAATGTCAATT+TGG + chr3_1:80421451-80421470 Msa0379330:intron 40.0%
TTTATGCTCCAGTTCTCAAC+TGG + chr3_1:80421796-80421815 Msa0379330:intron 40.0%
! GGTGTTGAGATTGGACATAT+TGG + chr3_1:80422188-80422207 Msa0379330:intron 40.0%
AGATTGGACATATTGGACTG+TGG + chr3_1:80422195-80422214 Msa0379330:intron 40.0%
AAAGCAAGGACTAAAAGCTC+AGG - chr3_1:80422383-80422402 None:intergenic 40.0%
!! AAAAGGTGCTCTAGACCAAA+TGG - chr3_1:80422469-80422488 None:intergenic 40.0%
ATCAAAGTACGAGTCAACAG+AGG + chr3_1:80422693-80422712 Msa0379330:CDS 40.0%
TCAAAGTACGAGTCAACAGA+GGG + chr3_1:80422694-80422713 Msa0379330:CDS 40.0%
TTGTCTGGAAAGTCCATTCT+AGG + chr3_1:80422883-80422902 Msa0379330:intron 40.0%
! TTATTAGTGGGGTACCTTTC+AGG + chr3_1:80423095-80423114 Msa0379330:intron 40.0%
! TATTAGTGGGGTACCTTTCA+GGG + chr3_1:80423096-80423115 Msa0379330:intron 40.0%
CTCATATAACTGTCCCTGAA+AGG - chr3_1:80423112-80423131 None:intergenic 40.0%
CTTTCAGGGACAGTTATATG+AGG + chr3_1:80423110-80423129 Msa0379330:intron 40.0%
TATATGGGACCCACATGATT+TGG - chr3_1:80423312-80423331 None:intergenic 40.0%
TGAGAAGATTGATGCACACT+AGG + chr3_1:80423508-80423527 Msa0379330:intron 40.0%
AAGATTGCTCAAGTGCTACA+TGG - chr3_1:80423696-80423715 None:intergenic 40.0%
!! ACACCAAAAGTTAGCTCTAG+GGG - chr3_1:80423721-80423740 None:intergenic 40.0%
! CAACACCAAAAGTTAGCTCT+AGG - chr3_1:80423723-80423742 None:intergenic 40.0%
!! CTAGAGCTAACTTTTGGTGT+TGG + chr3_1:80423721-80423740 Msa0379330:intron 40.0%
ACCAGAGTACACACCTTATA+AGG + chr3_1:80423950-80423969 Msa0379330:intron 40.0%
ACCTTATAAGGTGTGTACTC+TGG - chr3_1:80423954-80423973 None:intergenic 40.0%
AACTGATCTTTGTATGGTCG+AGG + chr3_1:80424190-80424209 Msa0379330:intron 40.0%
AACTGAGATCATCAGAGTCA+TGG + chr3_1:80424640-80424659 Msa0379330:CDS 40.0%
ACTGAGATCATCAGAGTCAT+GGG + chr3_1:80424641-80424660 Msa0379330:CDS 40.0%
AAGAAGTTGAGATGACAGTG+TGG + chr3_1:80424664-80424683 Msa0379330:CDS 40.0%
AGAAGTTGAGATGACAGTGT+GGG + chr3_1:80424665-80424684 Msa0379330:CDS 40.0%
! CACTTTTGCCTATGTGATGG+AGG + chr3_1:80413416-80413435 Msa0379330:five_prime_UTR 45.0%
!! TTTTGCCTATGTGATGGAGG+TGG + chr3_1:80413419-80413438 Msa0379330:five_prime_UTR 45.0%
AGGCATAGAGTCATCCATAG+TGG - chr3_1:80414385-80414404 None:intergenic 45.0%
! AACCAGATGCTCCTCCTTTT+AGG - chr3_1:80414405-80414424 None:intergenic 45.0%
TGGCACTCTTTGTACTTCTC+TGG - chr3_1:80414577-80414596 None:intergenic 45.0%
AAGAGTTGAATCCTGCAGGA+AGG - chr3_1:80414737-80414756 None:intergenic 45.0%
TATCCAGTGTGGTATGACAC+CGG - chr3_1:80414782-80414801 None:intergenic 45.0%
TTATACAGAGGGTGGCAATG+TGG + chr3_1:80414806-80414825 Msa0379330:CDS 45.0%
ACAACCGTCCTTTGTGTAGT+TGG + chr3_1:80415520-80415539 Msa0379330:intron 45.0%
CAACCGTCCTTTGTGTAGTT+GGG + chr3_1:80415521-80415540 Msa0379330:intron 45.0%
GTCCATTTAGCATGACCTGA+GGG - chr3_1:80415650-80415669 None:intergenic 45.0%
AGTCCATTTAGCATGACCTG+AGG - chr3_1:80415651-80415670 None:intergenic 45.0%
TCAGGTCATGCTAAATGGAC+TGG + chr3_1:80415650-80415669 Msa0379330:intron 45.0%
ATCAGTTGTCCATTTCTGCC+TGG - chr3_1:80415691-80415710 None:intergenic 45.0%
ACATGCCCCTAGCTTATTGA+AGG + chr3_1:80415988-80416007 Msa0379330:CDS 45.0%
ATCCAGCTCTTACAAGTGCA+TGG + chr3_1:80416131-80416150 Msa0379330:CDS 45.0%
TTCCATGCACTTGTAAGAGC+TGG - chr3_1:80416136-80416155 None:intergenic 45.0%
! CTCTTCTTTCTGGCCGTAAA+AGG + chr3_1:80416158-80416177 Msa0379330:CDS 45.0%
TTAATGAAGGGGATAGGGAG+AGG + chr3_1:80416386-80416405 Msa0379330:intron 45.0%
AGACTCACTAGGGATCTAAC+TGG + chr3_1:80416429-80416448 Msa0379330:intron 45.0%
GACTCACTAGGGATCTAACT+GGG + chr3_1:80416430-80416449 Msa0379330:intron 45.0%
!!! TTTTTTCCCCATTGGGAAGC+TGG + chr3_1:80416461-80416480 Msa0379330:intron 45.0%
! TTTTTCCCCATTGGGAAGCT+GGG + chr3_1:80416462-80416481 Msa0379330:intron 45.0%
CGTTTAGGCTGCAAGTCAAT+TGG + chr3_1:80416487-80416506 Msa0379330:intron 45.0%
CGTCTTAGATGGGAGTAGAT+AGG + chr3_1:80416805-80416824 Msa0379330:intron 45.0%
AGATGGGAGTAGATAGGAGT+TGG + chr3_1:80416811-80416830 Msa0379330:intron 45.0%
AAGAGTGAAGGATAACCTCC+CGG - chr3_1:80416978-80416997 None:intergenic 45.0%
! GGTGCATGGATTTTCTGTGT+TGG + chr3_1:80417251-80417270 Msa0379330:intron 45.0%
!!! ACACCTAAAGGCACTTTTCC+AGG - chr3_1:80417354-80417373 None:intergenic 45.0%
! TCTAGAACCTGCAGTGATGA+TGG - chr3_1:80417423-80417442 None:intergenic 45.0%
TTGTCTTCGTCAGCAAGAAG+AGG - chr3_1:80417593-80417612 None:intergenic 45.0%
TTTATGTTCCGAGTGGATGG+TGG + chr3_1:80417648-80417667 Msa0379330:CDS 45.0%
GTATGTTTGGATATGGCACC+TGG + chr3_1:80417743-80417762 Msa0379330:CDS 45.0%
GCACCTGGTTATCGTCATAA+AGG + chr3_1:80417758-80417777 Msa0379330:CDS 45.0%
GTCAACGGGAACTAAGAGAA+TGG + chr3_1:80418074-80418093 Msa0379330:CDS 45.0%
GAGAATGGTTGTCCAAGCTT+TGG + chr3_1:80418089-80418108 Msa0379330:CDS 45.0%
GCATGCATTGCACTAAATGC+CGG + chr3_1:80418245-80418264 Msa0379330:CDS 45.0%
CATTAAGGGAGGACATGTTG+AGG - chr3_1:80418615-80418634 None:intergenic 45.0%
!! ACCTTTGTAGGAAGGCACTT+TGG + chr3_1:80418751-80418770 Msa0379330:intron 45.0%
! ACCAAAGTGCCTTCCTACAA+AGG - chr3_1:80418755-80418774 None:intergenic 45.0%
GAACCATGTGCACCAAACTT+CGG - chr3_1:80418780-80418799 None:intergenic 45.0%
AGTCGAGCCACCTTATGAAT+CGG - chr3_1:80418956-80418975 None:intergenic 45.0%
ATTCATAAGGTGGCTCGACT+CGG + chr3_1:80418956-80418975 Msa0379330:intron 45.0%
! CGTTGGTGCTTACCATAACT+TGG + chr3_1:80419187-80419206 Msa0379330:intron 45.0%
!! TCTGACATGAGACCGGTTTT+TGG + chr3_1:80419264-80419283 Msa0379330:intron 45.0%
GCTTTATGGTTTAGGCACAG+AGG + chr3_1:80419419-80419438 Msa0379330:CDS 45.0%
ATTCCTAGTGTTATGGCCAG+TGG + chr3_1:80419563-80419582 Msa0379330:CDS 45.0%
TTCCTAGTGTTATGGCCAGT+GGG + chr3_1:80419564-80419583 Msa0379330:CDS 45.0%
CATCACAGAGAAATGCAACG+TGG + chr3_1:80419670-80419689 Msa0379330:CDS 45.0%
ACAGAGAAATGCAACGTGGA+TGG + chr3_1:80419674-80419693 Msa0379330:CDS 45.0%
! GACGGATCAGTTAGTTTAGC+CGG + chr3_1:80419758-80419777 Msa0379330:CDS 45.0%
CAGAAGAGACAGACTATCGT+GGG + chr3_1:80419963-80419982 Msa0379330:intron 45.0%
CACCAAGGCAAACCCAAAAA+TGG - chr3_1:80420483-80420502 None:intergenic 45.0%
TCAGTGTGTATCCAAGAGCA+GGG - chr3_1:80420787-80420806 None:intergenic 45.0%
GAGGTAGAGCAAATCGATGA+TGG - chr3_1:80420838-80420857 None:intergenic 45.0%
ATCTTCTGTATTCCCACTGG+AGG - chr3_1:80420857-80420876 None:intergenic 45.0%
AGCATCTTCTGTATTCCCAC+TGG - chr3_1:80420860-80420879 None:intergenic 45.0%
AATACAGAAGATGCTGCCGA+GGG + chr3_1:80420865-80420884 Msa0379330:CDS 45.0%
CAATAAACCATTGTCCCCCT+CGG - chr3_1:80420884-80420903 None:intergenic 45.0%
GGTTTATTGAGTGACCACGT+TGG + chr3_1:80420895-80420914 Msa0379330:CDS 45.0%
AAGACGGGTATGACTGAAGT+TGG - chr3_1:80421015-80421034 None:intergenic 45.0%
AGTGTATGTGAGAACCCACT+TGG + chr3_1:80421380-80421399 Msa0379330:intron 45.0%
GTGTATGTGAGAACCCACTT+GGG + chr3_1:80421381-80421400 Msa0379330:intron 45.0%
CATTGGGGAGAATCGAACAT+GGG - chr3_1:80421445-80421464 None:intergenic 45.0%
ACATTGGGGAGAATCGAACA+TGG - chr3_1:80421446-80421465 None:intergenic 45.0%
TCCCCAATGTCAATTTGGGT+GGG + chr3_1:80421456-80421475 Msa0379330:intron 45.0%
AGCCCACCCAAATTGACATT+GGG - chr3_1:80421461-80421480 None:intergenic 45.0%
TAGCCCACCCAAATTGACAT+TGG - chr3_1:80421462-80421481 None:intergenic 45.0%
AAAAGGGAATTTGTGGGGAC+AGG + chr3_1:80421645-80421664 Msa0379330:intron 45.0%
GTGGGGACAGGTGTTAAAAT+CGG + chr3_1:80421657-80421676 Msa0379330:intron 45.0%
! CACGCAAAAGCACAGTCTTA+AGG - chr3_1:80421714-80421733 None:intergenic 45.0%
ATTGGTGAAACGGGAACTAG+TGG + chr3_1:80422160-80422179 Msa0379330:intron 45.0%
TTGGTGAAACGGGAACTAGT+GGG + chr3_1:80422161-80422180 Msa0379330:intron 45.0%
TATTGGACTGTGGAGAGTTG+AGG + chr3_1:80422205-80422224 Msa0379330:intron 45.0%
ATCAGTCCTCCGTTCGAAAA+AGG - chr3_1:80422350-80422369 None:intergenic 45.0%
! ACAGAGGGTGGTCTAAAGTT+TGG + chr3_1:80422709-80422728 Msa0379330:CDS 45.0%
! TGCAGCCTTATCAGGGTTAT+AGG - chr3_1:80422841-80422860 None:intergenic 45.0%
! TTTGGTCTGCAGCCTTATCA+GGG - chr3_1:80422848-80422867 None:intergenic 45.0%
!! TTTTGGTCTGCAGCCTTATC+AGG - chr3_1:80422849-80422868 None:intergenic 45.0%
ACTAATAAATACGACGGCGG+CGG - chr3_1:80423083-80423102 None:intergenic 45.0%
CCCACTAATAAATACGACGG+CGG - chr3_1:80423086-80423105 None:intergenic 45.0%
CCGCCGTCGTATTTATTAGT+GGG + chr3_1:80423083-80423102 Msa0379330:intron 45.0%
CGCCGTCGTATTTATTAGTG+GGG + chr3_1:80423084-80423103 Msa0379330:intron 45.0%
TTAAGGAGTGGCAGAACACT+GGG + chr3_1:80423165-80423184 Msa0379330:intron 45.0%
ATGAGTCCCACCAAATCATG+TGG + chr3_1:80423299-80423318 Msa0379330:intron 45.0%
TGAGTCCCACCAAATCATGT+GGG + chr3_1:80423300-80423319 Msa0379330:intron 45.0%
TGCTTATTGCTCTCCCAACT+AGG + chr3_1:80423475-80423494 Msa0379330:intron 45.0%
ATCCGCATCTGCTAGAGATA+TGG + chr3_1:80423660-80423679 Msa0379330:intron 45.0%
GACCATATCTCTAGCAGATG+CGG - chr3_1:80423665-80423684 None:intergenic 45.0%
! TCACCCCTAGAGCTAACTTT+TGG + chr3_1:80423715-80423734 Msa0379330:intron 45.0%
AGAGCGGAGACAAATATGGT+TGG - chr3_1:80423808-80423827 None:intergenic 45.0%
ACCATATTTGTCTCCGCTCT+TGG + chr3_1:80423808-80423827 Msa0379330:intron 45.0%
TGCGTGTTCAAATCAGCTAG+AGG + chr3_1:80423923-80423942 Msa0379330:intron 45.0%
GAAGTTGAGATGACAGTGTG+GGG + chr3_1:80424666-80424685 Msa0379330:CDS 45.0%
!!! TATAAGAAAATTTTATAAAT+AGG + chr3_1:80421620-80421639 Msa0379330:intron 5.0%
!! TATATATATATGAAATTATT+TGG + chr3_1:80424141-80424160 Msa0379330:intron 5.0%
TGGAGGTGGCGTAGGAATAA+CGG + chr3_1:80413433-80413452 Msa0379330:five_prime_UTR 50.0%
GATCGCAGAATAGACGCTCT+TGG + chr3_1:80413647-80413666 Msa0379330:CDS 50.0%
GACGTTCGAGAATTGAGCAG+AGG - chr3_1:80413700-80413719 None:intergenic 50.0%
AGTGCTCAAGAGCTATGTGG+CGG - chr3_1:80414283-80414302 None:intergenic 50.0%
!! TGCCTAAAAGGAGGAGCATC+TGG + chr3_1:80414400-80414419 Msa0379330:CDS 50.0%
ACTGATGCTAACCTTCCTGC+AGG + chr3_1:80414723-80414742 Msa0379330:intron 50.0%
!! ATACCGGTGTCATACCACAC+TGG + chr3_1:80414776-80414795 Msa0379330:CDS 50.0%
! AACACACTGGCCTCGTAAAC+TGG - chr3_1:80415265-80415284 None:intergenic 50.0%
CACCCTCAGGTCATGCTAAA+TGG + chr3_1:80415645-80415664 Msa0379330:intron 50.0%
AGCTGGATCAACATGCCAAG+AGG - chr3_1:80416119-80416138 None:intergenic 50.0%
TCAGGCTTCTGCGTCTTAGA+TGG + chr3_1:80416794-80416813 Msa0379330:intron 50.0%
CAGGCTTCTGCGTCTTAGAT+GGG + chr3_1:80416795-80416814 Msa0379330:intron 50.0%
GCAGTAGTAGTACGGAGTAG+TGG + chr3_1:80416912-80416931 Msa0379330:intron 50.0%
ATAACCTCCCGGCCTATTCA+CGG - chr3_1:80416967-80416986 None:intergenic 50.0%
AGGTGGGCATTATATCCTCC+TGG + chr3_1:80417333-80417352 Msa0379330:intron 50.0%
!!! CCTAAAGGCACTTTTCCAGG+AGG - chr3_1:80417351-80417370 None:intergenic 50.0%
!! CCTCCTGGAAAAGTGCCTTT+AGG + chr3_1:80417348-80417367 Msa0379330:CDS 50.0%
ACATGCACCGTCACACCTAA+AGG - chr3_1:80417366-80417385 None:intergenic 50.0%
TGAGACTCCATCATCACTGC+AGG + chr3_1:80417413-80417432 Msa0379330:CDS 50.0%
ATACAGTGCCACCATCCACT+CGG - chr3_1:80417659-80417678 None:intergenic 50.0%
TCATAAAGGAGTCTGCCGTG+TGG + chr3_1:80417772-80417791 Msa0379330:CDS 50.0%
CATAAAGGAGTCTGCCGTGT+GGG + chr3_1:80417773-80417792 Msa0379330:CDS 50.0%
CAAGAGCAAGCAAACCCACA+CGG - chr3_1:80417790-80417809 None:intergenic 50.0%
TTAGTGCAATGCATGCTCCC+TGG - chr3_1:80418241-80418260 None:intergenic 50.0%
TTGCACTAAATGCCGGCAAG+TGG + chr3_1:80418252-80418271 Msa0379330:CDS 50.0%
CAGGCATTCTAACCACTTGC+CGG - chr3_1:80418267-80418286 None:intergenic 50.0%
GGAAGCCTTTCGTCATCTGT+GGG - chr3_1:80418323-80418342 None:intergenic 50.0%
AGGAAGCCTTTCGTCATCTG+TGG - chr3_1:80418324-80418343 None:intergenic 50.0%
GATGACGAAAGGCTTCCTGT+TGG + chr3_1:80418326-80418345 Msa0379330:CDS 50.0%
! CGAAAGGCTTCCTGTTGGTT+CGG + chr3_1:80418331-80418350 Msa0379330:CDS 50.0%
!! GAAAGGCTTCCTGTTGGTTC+GGG + chr3_1:80418332-80418351 Msa0379330:CDS 50.0%
GCACTTTGGTCACCGAAGTT+TGG + chr3_1:80418765-80418784 Msa0379330:intron 50.0%
!! TCACCGAAGTTTGGTGCACA+TGG + chr3_1:80418774-80418793 Msa0379330:intron 50.0%
GCACATGGTTCGATCCCTAT+AGG + chr3_1:80418789-80418808 Msa0379330:intron 50.0%
!!! GGTCGGTTTTCGAGTCAATC+CGG - chr3_1:80418870-80418889 None:intergenic 50.0%
TCGAAAACCGACCGAGTTAC+CGG + chr3_1:80418877-80418896 Msa0379330:intron 50.0%
GTCATAACCGGTAACTCGGT+CGG - chr3_1:80418887-80418906 None:intergenic 50.0%
! ACCGAGTTACCGGTTATGAC+CGG + chr3_1:80418887-80418906 Msa0379330:intron 50.0%
ACCGGTCATAACCGGTAACT+CGG - chr3_1:80418891-80418910 None:intergenic 50.0%
CGCTGAAAACCGGTCATAAC+CGG - chr3_1:80418899-80418918 None:intergenic 50.0%
!! TCGGTCTAATCACCGGTTCA+CGG + chr3_1:80418975-80418994 Msa0379330:intron 50.0%
!! TCTAATCACCGGTTCACGGT+CGG + chr3_1:80418979-80418998 Msa0379330:intron 50.0%
!! GGACTGGAAGCATCGCTTTA+TGG + chr3_1:80419405-80419424 Msa0379330:CDS 50.0%
ATGTTTCCTGAGAGGGGAGT+TGG - chr3_1:80419543-80419562 None:intergenic 50.0%
TCCTAGTGTTATGGCCAGTG+GGG + chr3_1:80419565-80419584 Msa0379330:CDS 50.0%
AACGTGGATGGTTTCCCGTT+TGG + chr3_1:80419686-80419705 Msa0379330:CDS 50.0%
ACGTGGATGGTTTCCCGTTT+GGG + chr3_1:80419687-80419706 Msa0379330:CDS 50.0%
! ATGGTTTCCCGTTTGGGGTA+TGG + chr3_1:80419693-80419712 Msa0379330:CDS 50.0%
! TGGTTTCCCGTTTGGGGTAT+GGG + chr3_1:80419694-80419713 Msa0379330:CDS 50.0%
TAGGAATACTGGGATTCCGG+CGG + chr3_1:80419736-80419755 Msa0379330:CDS 50.0%
AAACTAACTGATCCGTCCGC+CGG - chr3_1:80419755-80419774 None:intergenic 50.0%
GCAGAAGAGACAGACTATCG+TGG + chr3_1:80419962-80419981 Msa0379330:intron 50.0%
AACAAACTTGGCCTCCTTCC+TGG + chr3_1:80419993-80420012 Msa0379330:CDS 50.0%
ACAAACTTGGCCTCCTTCCT+GGG + chr3_1:80419994-80420013 Msa0379330:CDS 50.0%
TCTCAAGCCGTTTGACCAAG+TGG + chr3_1:80420202-80420221 Msa0379330:CDS 50.0%
!! AGCATGCAACAGAAGCACCA+AGG - chr3_1:80420498-80420517 None:intergenic 50.0%
GCACTTCTAAACCCTGCTCT+TGG + chr3_1:80420773-80420792 Msa0379330:CDS 50.0%
GTCAGTGTGTATCCAAGAGC+AGG - chr3_1:80420788-80420807 None:intergenic 50.0%
! TCGATTTGCTCTACCTCCAG+TGG + chr3_1:80420841-80420860 Msa0379330:CDS 50.0%
! CGATTTGCTCTACCTCCAGT+GGG + chr3_1:80420842-80420861 Msa0379330:CDS 50.0%
GAATACAGAAGATGCTGCCG+AGG + chr3_1:80420864-80420883 Msa0379330:CDS 50.0%
ATACAGAAGATGCTGCCGAG+GGG + chr3_1:80420866-80420885 Msa0379330:CDS 50.0%
ACCACGTTGGAGTGAAATCC+TGG + chr3_1:80420908-80420927 Msa0379330:CDS 50.0%
ACCAGGATTTCACTCCAACG+TGG - chr3_1:80420912-80420931 None:intergenic 50.0%
AAGGAGGTAACTAGGACACC+AGG - chr3_1:80420929-80420948 None:intergenic 50.0%
ATGTGAGAACCCACTTGGGT+TGG + chr3_1:80421385-80421404 Msa0379330:intron 50.0%
TGTGAGAACCCACTTGGGTT+GGG + chr3_1:80421386-80421405 Msa0379330:intron 50.0%
!! GTGGTATTGGCTTGGGATCT+GGG + chr3_1:80421412-80421431 Msa0379330:intron 50.0%
CTCCCCAATGTCAATTTGGG+TGG + chr3_1:80421455-80421474 Msa0379330:intron 50.0%
GCCCACCCAAATTGACATTG+GGG - chr3_1:80421460-80421479 None:intergenic 50.0%
TGGTGAAACGGGAACTAGTG+GGG + chr3_1:80422162-80422181 Msa0379330:intron 50.0%
AAACGGGAACTAGTGGGGAA+TGG + chr3_1:80422167-80422186 Msa0379330:intron 50.0%
! GTGGGGAATGGTGTTGAGAT+TGG + chr3_1:80422179-80422198 Msa0379330:intron 50.0%
TGTGGAGAGTTGAGGAACTC+TGG + chr3_1:80422213-80422232 Msa0379330:intron 50.0%
GCAAGGACTAAAAGCTCAGG+AGG - chr3_1:80422380-80422399 None:intergenic 50.0%
AAGTACGAGTCAACAGAGGG+TGG + chr3_1:80422697-80422716 Msa0379330:CDS 50.0%
GCCGCCGTCGTATTTATTAG+TGG + chr3_1:80423082-80423101 Msa0379330:intron 50.0%
CTTAAGGAGTGGCAGAACAC+TGG + chr3_1:80423164-80423183 Msa0379330:intron 50.0%
!! TGGGACCCACATGATTTGGT+GGG - chr3_1:80423308-80423327 None:intergenic 50.0%
! ATGGGACCCACATGATTTGG+TGG - chr3_1:80423309-80423328 None:intergenic 50.0%
GCCAAGAGCGGAGACAAATA+TGG - chr3_1:80423812-80423831 None:intergenic 50.0%
! GACATCTAGAGTGCCAAGAG+CGG - chr3_1:80423824-80423843 None:intergenic 50.0%
GCACATACTGCCTACTCTAG+AGG - chr3_1:80423906-80423925 None:intergenic 50.0%
CGTGAAAGCCTGAAAGTCAG+GGG - chr3_1:80424505-80424524 None:intergenic 50.0%
CCGTGAAAGCCTGAAAGTCA+GGG - chr3_1:80424506-80424525 None:intergenic 50.0%
CCCTGACTTTCAGGCTTTCA+CGG + chr3_1:80424503-80424522 Msa0379330:intron 50.0%
TCCGTGAAAGCCTGAAAGTC+AGG - chr3_1:80424507-80424526 None:intergenic 50.0%
CTACGCCACCTCCATCACAT+AGG - chr3_1:80413427-80413446 None:intergenic 55.0%
! CTATGTGATGGAGGTGGCGT+AGG + chr3_1:80413425-80413444 Msa0379330:five_prime_UTR 55.0%
GTTGTCCATTTCTGCCTGGC+AGG - chr3_1:80415687-80415706 None:intergenic 55.0%
AGGAGTAGTGTGGGGAGACA+GGG - chr3_1:80415894-80415913 None:intergenic 55.0%
AAGGAGTAGTGTGGGGAGAC+AGG - chr3_1:80415895-80415914 None:intergenic 55.0%
GGGCATGTTCGCCAAACTGT+TGG - chr3_1:80415976-80415995 None:intergenic 55.0%
!! CAAGAGGCACCAGATCTCTG+TGG - chr3_1:80416103-80416122 None:intergenic 55.0%
CACAGAGATCTGGTGCCTCT+TGG + chr3_1:80416101-80416120 Msa0379330:CDS 55.0%
ATGAAGGGGATAGGGAGAGG+TGG + chr3_1:80416389-80416408 Msa0379330:intron 55.0%
AACGCACCCAGCTTCCCAAT+GGG - chr3_1:80416471-80416490 None:intergenic 55.0%
AAACGCACCCAGCTTCCCAA+TGG - chr3_1:80416472-80416491 None:intergenic 55.0%
TTGGGAAGCTGGGTGCGTTT+AGG + chr3_1:80416472-80416491 Msa0379330:intron 55.0%
TGTACCACCCGTGAATAGGC+CGG + chr3_1:80416956-80416975 Msa0379330:intron 55.0%
TAACCTCCCGGCCTATTCAC+GGG - chr3_1:80416966-80416985 None:intergenic 55.0%
!! CGGGCAACAGCATTGGTCAA+CGG + chr3_1:80418059-80418078 Msa0379330:CDS 55.0%
!! GGGCAACAGCATTGGTCAAC+GGG + chr3_1:80418060-80418079 Msa0379330:CDS 55.0%
CTTTCGTCATCTGTGGGAGG+GGG - chr3_1:80418317-80418336 None:intergenic 55.0%
CCTTTCGTCATCTGTGGGAG+GGG - chr3_1:80418318-80418337 None:intergenic 55.0%
GCCTTTCGTCATCTGTGGGA+GGG - chr3_1:80418319-80418338 None:intergenic 55.0%
AGCCTTTCGTCATCTGTGGG+AGG - chr3_1:80418320-80418339 None:intergenic 55.0%
GGATTGCTACCCGAACCAAC+AGG - chr3_1:80418344-80418363 None:intergenic 55.0%
CGGTGAGACTCGCTGAAAAC+CGG - chr3_1:80418909-80418928 None:intergenic 55.0%
! CGGTTTTCAGCGAGTCTCAC+CGG + chr3_1:80418907-80418926 Msa0379330:intron 55.0%
!! GCTCGACTCGGTCTAATCAC+CGG + chr3_1:80418968-80418987 Msa0379330:intron 55.0%
TTGAAGCCAACTCCCCTCTC+AGG + chr3_1:80419534-80419553 Msa0379330:CDS 55.0%
ACCCCACTGGCCATAACACT+AGG - chr3_1:80419569-80419588 None:intergenic 55.0%
CGTGGATGGTTTCCCGTTTG+GGG + chr3_1:80419688-80419707 Msa0379330:CDS 55.0%
! GGTTTCCCGTTTGGGGTATG+GGG + chr3_1:80419695-80419714 Msa0379330:CDS 55.0%
TGCTTGCCCCATACCCCAAA+CGG - chr3_1:80419704-80419723 None:intergenic 55.0%
AATACTGGGATTCCGGCGGA+CGG + chr3_1:80419740-80419759 Msa0379330:CDS 55.0%
GTTGTGTGGCCTGCAGAAGT+AGG - chr3_1:80419907-80419926 None:intergenic 55.0%
CAAACTTGGCCTCCTTCCTG+GGG + chr3_1:80419995-80420014 Msa0379330:CDS 55.0%
AAACTTGGCCTCCTTCCTGG+GGG + chr3_1:80419996-80420015 Msa0379330:CDS 55.0%
TACAGAAGATGCTGCCGAGG+GGG + chr3_1:80420867-80420886 Msa0379330:CDS 55.0%
!! TTGGGTTGGGCTGGTGGTAT+TGG + chr3_1:80421399-80421418 Msa0379330:intron 55.0%
!! TTGGGCTGGTGGTATTGGCT+TGG + chr3_1:80421404-80421423 Msa0379330:intron 55.0%
!! TGGGCTGGTGGTATTGGCTT+GGG + chr3_1:80421405-80421424 Msa0379330:intron 55.0%
!! GGTGGTATTGGCTTGGGATC+TGG + chr3_1:80421411-80421430 Msa0379330:intron 55.0%
AATAAATACGACGGCGGCGG+CGG - chr3_1:80423080-80423099 None:intergenic 55.0%
! GCCTTGTTCCCCTGACTTTC+AGG + chr3_1:80424494-80424513 Msa0379330:intron 55.0%
GCCTGAAAGTCAGGGGAACA+AGG - chr3_1:80424498-80424517 None:intergenic 55.0%
TCGATCGTGCATTCAGGCTC+CGG - chr3_1:80424746-80424765 None:intergenic 55.0%
TTGGGCTCGATCGTGCATTC+AGG - chr3_1:80424752-80424771 None:intergenic 55.0%
TGGCGAATACATGGCCTGCC+AGG + chr3_1:80415670-80415689 Msa0379330:CDS 60.0%
CATGGCCTGCCAGGCAGAAA+TGG + chr3_1:80415679-80415698 Msa0379330:CDS 60.0%
ACGCACCCAGCTTCCCAATG+GGG - chr3_1:80416470-80416489 None:intergenic 60.0%
GTACCACCCGTGAATAGGCC+GGG + chr3_1:80416957-80416976 Msa0379330:intron 60.0%
TGGAGCTCGGGCAACAGCAT+TGG + chr3_1:80418052-80418071 Msa0379330:CDS 60.0%
GGGAGGGGGCAAGTTGTTGA+AGG - chr3_1:80418303-80418322 None:intergenic 60.0%
CCCCTCCCACAGATGACGAA+AGG + chr3_1:80418315-80418334 Msa0379330:CDS 60.0%
!! CGAGTCTCACCGGTTCACAC+TGG + chr3_1:80418917-80418936 Msa0379330:intron 60.0%
! AAAACTCGGCTCGAACCGGC+CGG - chr3_1:80419015-80419034 None:intergenic 60.0%
GCTTGCCCCATACCCCAAAC+GGG - chr3_1:80419703-80419722 None:intergenic 60.0%
CATTTGCTCCCCCAGGAAGG+AGG - chr3_1:80420007-80420026 None:intergenic 60.0%
!! AGAACCCACTTGGGTTGGGC+TGG + chr3_1:80421390-80421409 Msa0379330:intron 60.0%
ACCACCAGCCCAACCCAAGT+GGG - chr3_1:80421397-80421416 None:intergenic 60.0%
TACCACCAGCCCAACCCAAG+TGG - chr3_1:80421398-80421417 None:intergenic 60.0%
GCGACGCGAGCAGCATCTTG+AGG - chr3_1:80413728-80413747 None:intergenic 65.0%
CTCGCGTCGCTTGCGTTAGC+AGG + chr3_1:80413738-80413757 Msa0379330:CDS 65.0%
!! TCACCGGTTCACGGTCGGAC+CGG + chr3_1:80418984-80419003 Msa0379330:intron 65.0%
GAACCGGTCCGACCGTGAAC+CGG - chr3_1:80418990-80419009 None:intergenic 65.0%
! CACGGTCGGACCGGTTCAAC+CGG + chr3_1:80418993-80419012 Msa0379330:intron 65.0%
CTCGAACCGGCCGGTTGAAC+CGG - chr3_1:80419006-80419025 None:intergenic 65.0%
GCGCATTTGCTCCCCCAGGA+AGG - chr3_1:80420010-80420029 None:intergenic 65.0%
GATGCTGCCGAGGGGGACAA+TGG + chr3_1:80420874-80420893 Msa0379330:CDS 65.0%
!! ACCCACTTGGGTTGGGCTGG+TGG + chr3_1:80421393-80421412 Msa0379330:intron 65.0%
CCTCCCGGCCTATTCACGGG+TGG - chr3_1:80416963-80416982 None:intergenic 70.0%
CCACCCGTGAATAGGCCGGG+AGG + chr3_1:80416960-80416979 Msa0379330:intron 70.0%
! GTCGGACCGGTTCAACCGGC+CGG + chr3_1:80418997-80419016 Msa0379330:intron 70.0%
GGTGGCGCATTTGCTCCCCC+AGG - chr3_1:80420014-80420033 None:intergenic 70.0%
AAATACGACGGCGGCGGCGG+CGG - chr3_1:80423077-80423096 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 80413412 80425030 80413412 ID=Msa0379330;Name=Msa0379330
chr3_1 mRNA 80413412 80425030 80413412 ID=Msa0379330-mRNA-1;Parent=Msa0379330;Name=Msa0379330-mRNA-1;_AED=0.06;_eAED=0.06;_QI=199|1|0.93|1|1|1|15|311|1010
chr3_1 exon 80413412 80413759 80413412 ID=Msa0379330-mRNA-1:exon:20055;Parent=Msa0379330-mRNA-1
chr3_1 exon 80414354 80414622 80414354 ID=Msa0379330-mRNA-1:exon:20056;Parent=Msa0379330-mRNA-1
chr3_1 exon 80414745 80414887 80414745 ID=Msa0379330-mRNA-1:exon:20057;Parent=Msa0379330-mRNA-1
chr3_1 exon 80415654 80415851 80415654 ID=Msa0379330-mRNA-1:exon:20058;Parent=Msa0379330-mRNA-1
chr3_1 exon 80415980 80416179 80415980 ID=Msa0379330-mRNA-1:exon:20059;Parent=Msa0379330-mRNA-1
chr3_1 exon 80417335 80417434 80417335 ID=Msa0379330-mRNA-1:exon:20060;Parent=Msa0379330-mRNA-1
chr3_1 exon 80417572 80418147 80417572 ID=Msa0379330-mRNA-1:exon:20061;Parent=Msa0379330-mRNA-1
chr3_1 exon 80418242 80418364 80418242 ID=Msa0379330-mRNA-1:exon:20062;Parent=Msa0379330-mRNA-1
chr3_1 exon 80419360 80419440 80419360 ID=Msa0379330-mRNA-1:exon:20063;Parent=Msa0379330-mRNA-1
chr3_1 exon 80419512 80419843 80419512 ID=Msa0379330-mRNA-1:exon:20064;Parent=Msa0379330-mRNA-1
chr3_1 exon 80419966 80420223 80419966 ID=Msa0379330-mRNA-1:exon:20065;Parent=Msa0379330-mRNA-1
chr3_1 exon 80420576 80420660 80420576 ID=Msa0379330-mRNA-1:exon:20066;Parent=Msa0379330-mRNA-1
chr3_1 exon 80420760 80420970 80420760 ID=Msa0379330-mRNA-1:exon:20067;Parent=Msa0379330-mRNA-1
chr3_1 exon 80422584 80422752 80422584 ID=Msa0379330-mRNA-1:exon:20068;Parent=Msa0379330-mRNA-1
chr3_1 exon 80424581 80425030 80424581 ID=Msa0379330-mRNA-1:exon:20069;Parent=Msa0379330-mRNA-1
chr3_1 five_prime_UTR 80413412 80413610 80413412 ID=Msa0379330-mRNA-1:five_prime_utr;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80413611 80413759 80413611 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80414354 80414622 80414354 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80414745 80414887 80414745 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80415654 80415851 80415654 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80415980 80416179 80415980 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80417335 80417434 80417335 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80417572 80418147 80417572 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80418242 80418364 80418242 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80419360 80419440 80419360 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80419512 80419843 80419512 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80419966 80420223 80419966 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80420576 80420660 80420576 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80420760 80420970 80420760 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80422584 80422752 80422584 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 CDS 80424581 80424719 80424581 ID=Msa0379330-mRNA-1:cds;Parent=Msa0379330-mRNA-1
chr3_1 three_prime_UTR 80424720 80425030 80424720 ID=Msa0379330-mRNA-1:three_prime_utr;Parent=Msa0379330-mRNA-1
Gene Sequence

>Msa0379330

ATGGATTCTCAACAAGCTCACACTCACATTCAGATAGATCGCAGAATAGACGCTCTTGGCGATCTTCGAGTTCTTCCCGATGAAATCCTCTGCTCAATTCTCGAACGTCTCACTCCTCAAGATGCTGCTCGCGTCGCTTGCGTTAGCAGTGTGATGTATATACTATCCAATGAAGAACCACTATGGATGACTCTATGCCTAAAAGGAGGAGCATCTGGTTTTCTTCAATACAAAGGCTCTTGGAAGAAAACTGCTCTGCATAAGTACAATGTCGCTCACTCTCTCAATGTACAATTGCCTGTTTTATTCATTTTTATATTTAATGCTAACATATTTGGAATCGGATATTTTGAATGCAGTTTGAATCTTCCAGAGAAGTACAAAGAGTGCCATAGACAGCAGCCTTTACATTTTGATGGATTCAACTCTTTGTTTTTGTATCGGAGATTATACCGGTGTCATACCACACTGGATACATTTTATACAGAGGGTGGCAATGTGGAAAGAATAAATGACATCTCAATGAAGGACTTCAACGACAAGTATGACATGAAGAAACCGGTCATGCTAAATGGACTGGCGAATACATGGCCTGCCAGGCAGAAATGGACAACTGATCAGCTGTTACAAAACTATGGAGATGTTGCATTTAAAATTTCTCAAAGGAGTTCCAAAAAGATCTCCATGAAGTTCAAGGATTATGTCTCATACATGGAAGTTCAACACGATGAAGACCCATTATATATTTTCGACGAAAAGTTTGGCGAACATGCCCCTAGCTTATTGAAGGATTACTGCGTGCCTCATCTTTTTCAAGAAGACCTCTTCGATATCTTAGATACAGATAAACGACCATCCTATAGGTGGCTTATAATTGGACCACAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACAAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCATTATATCCTCCTGGAAAAGTGCCTTTAGGTGTGACGGTGCATGTTAATGAAGAAGATGGTGATGTCAGTATTGAGACTCCATCATCACTGCAGTGGTGGTTAGATTTTTATCCTCTTCTTGCTGACGAAGACAAGCCAATTGAATGTACACAACTACCTGGAGAGACAATTTATGTTCCGAGTGGATGGTGGCACTGTATTTTAAATTTGGAAACAACTATTGCAGTCACGCAGAATTTTGTGAATTCTAATAACTTCGAATTTGTATGTTTGGATATGGCACCTGGTTATCGTCATAAAGGAGTCTGCCGTGTGGGTTTGCTTGCTCTTGAAGAAGATGTTTATGAAAATGTCATACAGAACATGTCATGTAATGAAGAAAACTTAAGTTACTCTGATTTGTCAAGGAAAGAGAAAAGATCCAAAACTCTGAAAGATGTAGACGATCTATGTTTAGAAAGAGAAATAAGTGGTGCATCCAGAAGCTATAATTTATGGAAAGGTGGATTTTCTTATGATATAAATTTCTTATCCATGTTTTTGGATAAGGATAGAGACCACTACAATTTTGAGTGGAGCTCGGGCAACAGCATTGGTCAACGGGAACTAAGAGAATGGTTGTCCAAGCTTTGGATTCAAAAACCAGATATGAGAGATCTAATATGGAAGGGAGCATGCATTGCACTAAATGCCGGCAAGTGGTTAGAATGCCTGTCAAAAATTTGTGCCTTCAACAACTTGCCCCCTCCCACAGATGACGAAAGGCTTCCTGTTGGTTCGGGTAGCAATCCTGTTTATCTAGTGGGGAACTATGTTGTTAAGATTTTTGTCGAAGAAGGACTGGAAGCATCGCTTTATGGTTTAGGCACAGAGTTAGAGTTTTACAGTCTGCTGCTTGAAGCCAACTCCCCTCTCAGGAAACATATTCCTAGTGTTATGGCCAGTGGGGTTGTTTATCTTGAAGACGAATCCTATACCAATTTAAGTTGGGATGGAAAAGGAGTTCCCAGTGTCATTTTGAAGAGCAATATCATCACAGAGAAATGCAACGTGGATGGTTTCCCGTTTGGGGTATGGGGCAAGCAATTGTTTGAGTATAGGAATACTGGGATTCCGGCGGACGGATCAGTTAGTTTAGCCGGTAACTCAAGTATATGGCCATATTTGATAATTAAGCGATGTGAGGGGAATATGTTTGCAGACTTAAGAGACAGACTATCGTGGGAAGATACAACAAACTTGGCCTCCTTCCTGGGGGAGCAAATGCGCCACCTTCATCTTTTACCACATCCACCTTTAAATAATTCATTTATATCTGATATTGAACGTGAATTAAACTGGTCTGAGGTGAAAGGTTGCACTGCAAATGTTAATTGTAAATCAAACAATGCAGCAGAATGGGGACTCTTCACCAGAATCTTAACAAAGAAGAGGAAGGACGTCTCAAGCCGTTTGACCAAGTGGGGAGATCCAATTCCTAGCAAACTGATTGAGAAAATCGATGAATATCTACCATCTGATTTATCTAAGCTGCTAAATATAAATGAGAATTTCTCAAGTGGCACTTCTAAACCCTGCTCTTGGATACACACTGACATTATGGATGATAATATTTACATGGAACCATCATCGATTTGCTCTACCTCCAGTGGGAATACAGAAGATGCTGCCGAGGGGGACAATGGTTTATTGAGTGACCACGTTGGAGTGAAATCCTGGTGTCCTAGTTACCTCCTTGATTTCAGTGATCTTTCTATGGGTGATCCTATTTTTGACTTGATACCAATTTATTTGGATGTGTTTAGAGGCGATTCATATCTTCTTAAGCAATTTTTAGAAAGTTACAAACTTCCTTTTTCTGGCAACATATCAAAGTACGAGTCAACAGAGGGTGGTCTAAAGTTTGGTCGACTTTCATATGTTGCTATGTGTTATTGTATTTTGCATGACGATAATGTCTTGGGAGCTATTTTTAGCATATGGGACGAACTGAGATCATCAGAGTCATGGGAAGAAGTTGAGATGACAGTGTGGGGAGAGTTGAACAATTACAAAGGCTTTCTTTGA
Protein sequence

>Msa0379330

MDSQQAHTHIQIDRRIDALGDLRVLPDEILCSILERLTPQDAARVACVSSVMYILSNEEPLWMTLCLKGGASGFLQYKGSWKKTALHKYNVAHSLNVQLPVLFIFIFNANIFGIGYFECSLNLPEKYKECHRQQPLHFDGFNSLFLYRRLYRCHTTLDTFYTEGGNVERINDISMKDFNDKYDMKKPVMLNGLANTWPARQKWTTDQLLQNYGDVAFKISQRSSKKISMKFKDYVSYMEVQHDEDPLYIFDEKFGEHAPSLLKDYCVPHLFQEDLFDILDTDKRPSYRWLIIGPQRSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVSIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCILNLETTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRVGLLALEEDVYENVIQNMSCNEENLSYSDLSRKEKRSKTLKDVDDLCLEREISGASRSYNLWKGGFSYDINFLSMFLDKDRDHYNFEWSSGNSIGQRELREWLSKLWIQKPDMRDLIWKGACIALNAGKWLECLSKICAFNNLPPPTDDERLPVGSGSNPVYLVGNYVVKIFVEEGLEASLYGLGTELEFYSLLLEANSPLRKHIPSVMASGVVYLEDESYTNLSWDGKGVPSVILKSNIITEKCNVDGFPFGVWGKQLFEYRNTGIPADGSVSLAGNSSIWPYLIIKRCEGNMFADLRDRLSWEDTTNLASFLGEQMRHLHLLPHPPLNNSFISDIERELNWSEVKGCTANVNCKSNNAAEWGLFTRILTKKRKDVSSRLTKWGDPIPSKLIEKIDEYLPSDLSKLLNINENFSSGTSKPCSWIHTDIMDDNIYMEPSSICSTSSGNTEDAAEGDNGLLSDHVGVKSWCPSYLLDFSDLSMGDPIFDLIPIYLDVFRGDSYLLKQFLESYKLPFSGNISKYESTEGGLKFGRLSYVAMCYCILHDDNVLGAIFSIWDELRSSESWEEVEMTVWGELNNYKGFL*