AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0475180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475180 MtrunA17_Chr3g0132281 93.663 1010 31 2 1 1010 1 977 0.0 1940
Msa0475180 MtrunA17_Chr7g0268031 36.228 403 212 9 12 411 88 448 3.92e-70 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0475180 AT1G78280.1 58.193 1007 341 13 11 1006 6 943 0.0 1174
Msa0475180 AT5G06550.1 35.088 399 214 9 12 408 73 428 1.61e-70 244
Msa0475180 AT5G63080.1 26.690 281 164 11 165 411 7 279 9.45e-19 90.9

Find 232 sgRNAs with CRISPR-Local

Find 796 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTAATGCTAACATATT+TGG 0.141224 3_3:-78238138 Msa0475180:CDS
CCTCTTCTTTGTTAAGATTC+TGG 0.145954 3_3:+78232488 None:intergenic
GCATGGAATACTCTTCTTTC+TGG 0.157901 3_3:-78236512 Msa0475180:CDS
TGACTTGATACCAATTTATT+TGG 0.164384 3_3:-78230064 Msa0475180:CDS
TGATTTCAGTGATCTTTCTA+TGG 0.200906 3_3:-78231712 Msa0475180:CDS
GTCTACATCTTTCAGAGTTT+TGG 0.213866 3_3:+78234760 None:intergenic
GGACTGGAAGCATCGCTTTA+TGG 0.213881 3_3:-78233255 Msa0475180:CDS
CATCCAGAAGCTATAATTTA+TGG 0.214640 3_3:-78234706 Msa0475180:CDS
GATATAAATGAATTATTTAA+AGG 0.220719 3_3:+78232606 None:intergenic
CGAATTTGTATGTTTGGATA+TGG 0.225637 3_3:-78234924 Msa0475180:CDS
TTGCTGCATTTAAATATTTC+CGG 0.228971 3_3:-78227933 Msa0475180:three_prime_UTR
CTCTTCTTTCTGGCCGTAAA+AGG 0.234128 3_3:-78236502 Msa0475180:intron
TCCTATAGGTGGCTTATAAT+TGG 0.239011 3_3:-78236584 Msa0475180:CDS
CACCCTCAGGTCATGCTAAA+TGG 0.250190 3_3:-78237015 Msa0475180:intron
CATATTAGATCTCTCATATC+TGG 0.253644 3_3:+78234539 None:intergenic
ACGTGGATGGTTTCCCGTTT+GGG 0.269531 3_3:-78232973 Msa0475180:CDS
TTGGATACACACTGACATTA+TGG 0.277456 3_3:-78231868 Msa0475180:CDS
CTAAACACATCCAAATAAAT+TGG 0.279520 3_3:+78230054 None:intergenic
TAACTTCGAATTTGTATGTT+TGG 0.284606 3_3:-78234930 Msa0475180:CDS
TTTGATATGTTGCCAGAAAA+AGG 0.286273 3_3:+78229985 None:intergenic
AACAAACTTGGCCTCCTTCC+TGG 0.289607 3_3:-78232667 Msa0475180:CDS
TTGTTTGAGTATAGGAATAC+TGG 0.294582 3_3:-78232935 Msa0475180:CDS
TCAATCAGTTTGCTAGGAAT+TGG 0.295536 3_3:+78232077 None:intergenic
TTTCCATAAATTATAGCTTC+TGG 0.297974 3_3:+78234703 None:intergenic
AGAATCCATCAAATCTAAAA+TGG 0.298662 3_3:+78239061 None:intergenic
CAGATATGAGAGATCTAATA+TGG 0.307979 3_3:-78234538 Msa0475180:CDS
TGGTTTCCCGTTTGGGGTAT+GGG 0.311759 3_3:-78232966 Msa0475180:CDS
GACATAATCCTTGAACTTCA+TGG 0.326012 3_3:+78236885 None:intergenic
CTCGCGTCGCTTGCGTTAGC+AGG 0.327432 3_3:-78238920 Msa0475180:intron
CATCGCTTAATTATCAAATA+TGG 0.329184 3_3:+78232863 None:intergenic
ATGGTTTCCCGTTTGGGGTA+TGG 0.336226 3_3:-78232967 Msa0475180:CDS
AACGTGGATGGTTTCCCGTT+TGG 0.339996 3_3:-78232974 Msa0475180:CDS
CATCCATAGTGGTTCTTCAT+TGG 0.346934 3_3:+78238287 None:intergenic
TTGGGCTCGATCGTGCATTC+AGG 0.356498 3_3:+78227908 None:intergenic
TGGCACTCTTTGTACTTCTC+TGG 0.357779 3_3:+78238084 None:intergenic
ATCCCAACTTAAATTGGTAT+AGG 0.361855 3_3:+78233051 None:intergenic
GAGAATGGTTGTCCAAGCTT+TGG 0.365534 3_3:-78234571 Msa0475180:CDS
GATCAGCTGTTACAAAACTA+TGG 0.367650 3_3:-78236952 Msa0475180:CDS
GAAAGGCTTCCTGTTGGTTC+GGG 0.369837 3_3:-78234328 Msa0475180:CDS
TTTCGTCGAAAATATATAAT+GGG 0.370958 3_3:+78236833 None:intergenic
CGAAAGGCTTCCTGTTGGTT+CGG 0.372369 3_3:-78234329 Msa0475180:CDS
CATGGCCTGCCAGGCAGAAA+TGG 0.378327 3_3:-78236981 Msa0475180:CDS
AATGTAAAGGCTGCTGTCTA+TGG 0.380107 3_3:+78238064 None:intergenic
ATTTATTTGGATGTGTTTAG+AGG 0.384148 3_3:-78230051 Msa0475180:CDS
ATCAAACAATGCAGCAGAAT+GGG 0.387429 3_3:-78232520 Msa0475180:CDS
TAGCCGGTAACTCAAGTATA+TGG 0.392078 3_3:-78232886 Msa0475180:CDS
TGGCCATATACTTGAGTTAC+CGG 0.392860 3_3:+78232883 None:intergenic
TGGATGACTCTATGCCTAAA+AGG 0.397240 3_3:-78238270 Msa0475180:CDS
CCTCCTGGAAAAGTGCCTTT+AGG 0.405897 3_3:-78235311 Msa0475180:CDS
TGCCTAAAAGGAGGAGCATC+TGG 0.408109 3_3:-78238258 Msa0475180:CDS
GGGCAACAGCATTGGTCAAC+GGG 0.409974 3_3:-78234600 Msa0475180:CDS
GGTAGTTGTGTACATTCAAT+TGG 0.411189 3_3:+78235046 None:intergenic
GTATAGGAATACTGGGATTC+CGG 0.412569 3_3:-78232927 Msa0475180:CDS
ACAAACTTGGCCTCCTTCCT+GGG 0.419271 3_3:-78232666 Msa0475180:CDS
GTTGTCCATTTCTGCCTGGC+AGG 0.425101 3_3:+78236976 None:intergenic
GAAACATATTCCTAGTGTTA+TGG 0.425446 3_3:-78233104 Msa0475180:CDS
CAGGCATTCTAACCACTTGC+CGG 0.427854 3_3:+78234396 None:intergenic
ATATTGAACGTGAATTAAAC+TGG 0.429371 3_3:-78232581 Msa0475180:CDS
AATCCTATACCAATTTAAGT+TGG 0.431151 3_3:-78233054 Msa0475180:CDS
TTGCATGACGATAATGTCTT+GGG 0.433068 3_3:-78228063 Msa0475180:CDS
TGGCGAATACATGGCCTGCC+AGG 0.433299 3_3:-78236990 Msa0475180:CDS
GATTTCAGTGATCTTTCTAT+GGG 0.433748 3_3:-78231711 Msa0475180:intron
AATGCTAACATATTTGGAAT+CGG 0.435803 3_3:-78238132 Msa0475180:CDS
ACATGCCCCTAGCTTATTGA+AGG 0.436977 3_3:-78236672 Msa0475180:CDS
ACAGAGGGTGGTCTAAAGTT+TGG 0.438033 3_3:-78229952 Msa0475180:CDS
GCAAGCAATTGTTTGAGTAT+AGG 0.439732 3_3:-78232943 Msa0475180:CDS
ATCCTATACCAATTTAAGTT+GGG 0.441548 3_3:-78233053 Msa0475180:CDS
ATCAGTTGTCCATTTCTGCC+TGG 0.443048 3_3:+78236972 None:intergenic
GAAGCATCGCTTTATGGTTT+AGG 0.443732 3_3:-78233249 Msa0475180:CDS
CACAGAGATCTGGTGCCTCT+TGG 0.445712 3_3:-78236559 Msa0475180:CDS
AAAGATCTCCATGAAGTTCA+AGG 0.447205 3_3:-78236893 Msa0475180:CDS
TGCTTGCCCCATACCCCAAA+CGG 0.447802 3_3:+78232959 None:intergenic
TGTAAATAGGTTTATCTAGT+GGG 0.450022 3_3:-78233309 Msa0475180:intron
GCACCTGGTTATCGTCATAA+AGG 0.453039 3_3:-78234902 Msa0475180:CDS
TTCTTCAATACAAAGGCTCT+TGG 0.456556 3_3:-78238233 Msa0475180:CDS
TATCCAATGAAGAACCACTA+TGG 0.457458 3_3:-78238290 Msa0475180:CDS
TTTGCATGACGATAATGTCT+TGG 0.462274 3_3:-78228064 Msa0475180:CDS
CTGAAATCAAGGAGGTAACT+AGG 0.465174 3_3:+78231726 None:intergenic
GCACTTCTAAACCCTGCTCT+TGG 0.465947 3_3:-78231887 Msa0475180:CDS
TTCCATGCACTTGTAAGAGC+TGG 0.466147 3_3:+78236527 None:intergenic
TTGAAGCCAACTCCCCTCTC+AGG 0.468399 3_3:-78233126 Msa0475180:CDS
TTCCTAGTGTTATGGCCAGT+GGG 0.468965 3_3:-78233096 Msa0475180:CDS
TAGAAAGATCACTGAAATCA+AGG 0.469489 3_3:+78231715 None:intergenic
GTCAGTGTGTATCCAAGAGC+AGG 0.469541 3_3:+78231875 None:intergenic
AAGTATACCACTTGGTCAAA+CGG 0.469956 3_3:+78232451 None:intergenic
CAGATAAACGACCATCCTAT+AGG 0.470762 3_3:-78236598 Msa0475180:CDS
CCTTTCGTCATCTGTGGGAG+GGG 0.475975 3_3:+78234345 None:intergenic
TCGATCGTGCATTCAGGCTC+CGG 0.481122 3_3:+78227914 None:intergenic
TCTAGAACCTGCAGTGATGA+TGG 0.481252 3_3:+78235239 None:intergenic
TCCAATTATAAGCCACCTAT+AGG 0.486415 3_3:+78236583 None:intergenic
AAATATTTAAATGCAGCAAA+TGG 0.488889 3_3:+78227937 None:intergenic
ATAATTGGACCACAGAGATC+TGG 0.489173 3_3:-78236569 Msa0475180:CDS
GCCTTTCGTCATCTGTGGGA+GGG 0.490405 3_3:+78234344 None:intergenic
GAATTATTTAAAGGTGGATG+TGG 0.496530 3_3:+78232615 None:intergenic
AATCAAACAATGCAGCAGAA+TGG 0.499094 3_3:-78232521 Msa0475180:CDS
CAATTTATGTTCCGAGTGGA+TGG 0.499365 3_3:-78235015 Msa0475180:CDS
GGTTTCCCGTTTGGGGTATG+GGG 0.499368 3_3:-78232965 Msa0475180:CDS
ACATGCACCGTCACACCTAA+AGG 0.501322 3_3:+78235296 None:intergenic
TTTACGGTTAATTTAAGCCA+AGG 0.503126 3_3:+78227702 None:intergenic
AGGTGGGCATTATATCCTCC+TGG 0.509762 3_3:-78235326 Msa0475180:CDS
GCTTGCCCCATACCCCAAAC+GGG 0.510621 3_3:+78232960 None:intergenic
ATGTTTCCTGAGAGGGGAGT+TGG 0.512138 3_3:+78233120 None:intergenic
AGAAGTTGAGATGACAGTGT+GGG 0.513193 3_3:-78227992 Msa0475180:CDS
TGGAGCTCGGGCAACAGCAT+TGG 0.513686 3_3:-78234608 Msa0475180:CDS
TATACCAATTTAAGTTGGGA+TGG 0.514509 3_3:-78233049 Msa0475180:CDS
TAAATGGACTGGCGAATACA+TGG 0.516680 3_3:-78236999 Msa0475180:CDS
ATTGAGCAGAGGATTTCATC+GGG 0.517061 3_3:+78238972 None:intergenic
AATTTAAGTTGGGATGGAAA+AGG 0.517463 3_3:-78233043 Msa0475180:CDS
CAGTAATCCTTCAATAAGCT+AGG 0.518812 3_3:+78236665 None:intergenic
AACTGAGATCATCAGAGTCA+TGG 0.520852 3_3:-78228017 Msa0475180:CDS
AATTGAGCAGAGGATTTCAT+CGG 0.521661 3_3:+78238971 None:intergenic
AATAAATGACATCTCAATGA+AGG 0.522634 3_3:-78237825 Msa0475180:CDS
CAAGTATGACATGAAGAAAC+CGG 0.525208 3_3:-78237792 Msa0475180:intron
TAAGTTACTCTGATTTGTCA+AGG 0.527231 3_3:-78234796 Msa0475180:CDS
TTGATAATTAAGCGATGTGA+GGG 0.528989 3_3:-78232857 Msa0475180:CDS
TAGGAATATGTTTCCTGAGA+GGG 0.530545 3_3:+78233113 None:intergenic
TCTTCTTAAGCGCTTTCTGT+CGG 0.530677 3_3:+78239190 None:intergenic
CGGGCAACAGCATTGGTCAA+CGG 0.534919 3_3:-78234601 Msa0475180:CDS
TGGAGGTGGCGTAGGAATAA+CGG 0.535993 3_3:-78239225 Msa0475180:five_prime_UTR
AGGCATAGAGTCATCCATAG+TGG 0.536115 3_3:+78238276 None:intergenic
ATAAATGAATTATTTAAAGG+TGG 0.536575 3_3:+78232609 None:intergenic
TATGGATGATAATATTTACA+TGG 0.536763 3_3:-78231850 Msa0475180:CDS
ATTGCTCTTCAAAATGACAC+TGG 0.537117 3_3:+78233015 None:intergenic
AGTAATCCTTCAATAAGCTA+GGG 0.541163 3_3:+78236666 None:intergenic
TGTTTGAGTATAGGAATACT+GGG 0.542687 3_3:-78232934 Msa0475180:CDS
CAAGGATTATGTCTCATACA+TGG 0.543266 3_3:-78236875 Msa0475180:CDS
GCATGCATTGCACTAAATGC+CGG 0.547137 3_3:-78234415 Msa0475180:CDS
CTGTAAATAGGTTTATCTAG+TGG 0.547357 3_3:-78233310 Msa0475180:intron
TAAGCTGCTAAATATAAATG+AGG 0.548356 3_3:-78232021 Msa0475180:intron
GGAACATAAATTGTCTCTCC+AGG 0.550858 3_3:+78235025 None:intergenic
AGGAAGCCTTTCGTCATCTG+TGG 0.551264 3_3:+78234339 None:intergenic
AAACTAACTGATCCGTCCGC+CGG 0.551543 3_3:+78232908 None:intergenic
GATCGCAGAATAGACGCTCT+TGG 0.552054 3_3:-78239011 Msa0475180:CDS
ATCCAGCTCTTACAAGTGCA+TGG 0.557351 3_3:-78236529 Msa0475180:CDS
ACCACGTTGGAGTGAAATCC+TGG 0.558962 3_3:-78231752 Msa0475180:CDS
GACGGATCAGTTAGTTTAGC+CGG 0.560179 3_3:-78232902 Msa0475180:CDS
GCGACGCGAGCAGCATCTTG+AGG 0.560780 3_3:+78238933 None:intergenic
GGATTGCTACCCGAACCAAC+AGG 0.563415 3_3:+78234319 None:intergenic
GTGGGAAGATACAACAAACT+TGG 0.564350 3_3:-78232679 Msa0475180:CDS
GAGGTAGAGCAAATCGATGA+TGG 0.564450 3_3:+78231825 None:intergenic
TTGCATTTAAAATTTCTCAA+AGG 0.564534 3_3:-78236924 Msa0475180:CDS
CGTGGATGGTTTCCCGTTTG+GGG 0.564553 3_3:-78232972 Msa0475180:CDS
TTGTTACCATCAAAATGTAA+AGG 0.567945 3_3:+78238051 None:intergenic
AGAAGCTATAATTTATGGAA+AGG 0.568532 3_3:-78234701 Msa0475180:CDS
TGAGACTCCATCATCACTGC+AGG 0.568853 3_3:-78235246 Msa0475180:intron
CATAAAGGAGTCTGCCGTGT+GGG 0.569358 3_3:-78234887 Msa0475180:CDS
CCAGAATCTTAACAAAGAAG+AGG 0.570253 3_3:-78232488 Msa0475180:CDS
AGCCTTTCGTCATCTGTGGG+AGG 0.570411 3_3:+78234343 None:intergenic
ACCCCACTGGCCATAACACT+AGG 0.575861 3_3:+78233094 None:intergenic
TCAGGTCATGCTAAATGGAC+TGG 0.577021 3_3:-78237010 Msa0475180:intron
AGCATCTTCTGTATTCCCAC+TGG 0.577196 3_3:+78231803 None:intergenic
ACTGAGATCATCAGAGTCAT+GGG 0.579147 3_3:-78228016 Msa0475180:CDS
AGCTATAATTTATGGAAAGG+TGG 0.579530 3_3:-78234698 Msa0475180:CDS
ATTCCTAGTGTTATGGCCAG+TGG 0.580711 3_3:-78233097 Msa0475180:CDS
ATCAAAGTACGAGTCAACAG+AGG 0.583079 3_3:-78229968 Msa0475180:CDS
GAAGTTGAGATGACAGTGTG+GGG 0.583600 3_3:-78227991 Msa0475180:CDS
TCTCAAGCCGTTTGACCAAG+TGG 0.584548 3_3:-78232458 Msa0475180:intron
CTTTCGTCATCTGTGGGAGG+GGG 0.587951 3_3:+78234346 None:intergenic
TCCTAGTGTTATGGCCAGTG+GGG 0.588471 3_3:-78233095 Msa0475180:CDS
AATACTGGGATTCCGGCGGA+CGG 0.589838 3_3:-78232920 Msa0475180:CDS
GTCAACGGGAACTAAGAGAA+TGG 0.591171 3_3:-78234586 Msa0475180:CDS
AGCAGCTTAGATAAATCAGA+TGG 0.592390 3_3:+78232035 None:intergenic
TTTGATAATTAAGCGATGTG+AGG 0.594501 3_3:-78232858 Msa0475180:CDS
TCGATTTGCTCTACCTCCAG+TGG 0.595230 3_3:-78231819 Msa0475180:CDS
ACAGAGAAATGCAACGTGGA+TGG 0.595885 3_3:-78232986 Msa0475180:CDS
GTAAATAGGTTTATCTAGTG+GGG 0.600129 3_3:-78233308 Msa0475180:intron
ATCTTCTGTATTCCCACTGG+AGG 0.600340 3_3:+78231806 None:intergenic
TATGAGAGATCTAATATGGA+AGG 0.601472 3_3:-78234534 Msa0475180:intron
TGACTTCAGAATTTCTCAAG+TGG 0.604991 3_3:-78231909 Msa0475180:intron
CTATGTGATGGAGGTGGCGT+AGG 0.605203 3_3:-78239233 Msa0475180:five_prime_UTR
AATCTTAACAAAGAAGAGGA+AGG 0.605956 3_3:-78232484 Msa0475180:CDS
AATACAGAAGATGCTGCCGA+GGG 0.606356 3_3:-78231795 Msa0475180:CDS
GTATGTTTGGATATGGCACC+TGG 0.607998 3_3:-78234917 Msa0475180:CDS
ATTATAAGCCACCTATAGGA+TGG 0.608178 3_3:+78236587 None:intergenic
CCCCTCCCACAGATGACGAA+AGG 0.610507 3_3:-78234345 Msa0475180:CDS
TTGCACTAAATGCCGGCAAG+TGG 0.611811 3_3:-78234408 Msa0475180:CDS
GTGCATGTTAATGAAGAAGA+TGG 0.611852 3_3:-78235281 Msa0475180:CDS
AGCTCCACTCAAAATTGTAG+TGG 0.612842 3_3:+78234624 None:intergenic
GGAAGCCTTTCGTCATCTGT+GGG 0.613871 3_3:+78234340 None:intergenic
CAGAAGAGACAGACTATCGT+GGG 0.616345 3_3:-78232697 Msa0475180:CDS
CAAACTTGGCCTCCTTCCTG+GGG 0.618358 3_3:-78232665 Msa0475180:CDS
TGTTTAGAAAGAGAAATAAG+TGG 0.619138 3_3:-78234731 Msa0475180:CDS
TTGCTCTTCAAAATGACACT+GGG 0.620536 3_3:+78233016 None:intergenic
GAATACAGAAGATGCTGCCG+AGG 0.621862 3_3:-78231796 Msa0475180:CDS
CTACGCCACCTCCATCACAT+AGG 0.622116 3_3:+78239234 None:intergenic
TACAGAAGATGCTGCCGAGG+GGG 0.626315 3_3:-78231793 Msa0475180:CDS
TTGTCTTCGTCAGCAAGAAG+AGG 0.627512 3_3:+78235070 None:intergenic
AGGAATATGTTTCCTGAGAG+GGG 0.628568 3_3:+78233114 None:intergenic
GTGGATGTGGTAAAAGATGA+AGG 0.628693 3_3:+78232628 None:intergenic
CGATTTGCTCTACCTCCAGT+GGG 0.629855 3_3:-78231818 Msa0475180:CDS
ATACAGTGCCACCATCCACT+CGG 0.631096 3_3:+78235004 None:intergenic
TCAAACAATGCAGCAGAATG+GGG 0.631106 3_3:-78232519 Msa0475180:CDS
GACGTTCGAGAATTGAGCAG+AGG 0.634922 3_3:+78238961 None:intergenic
GATGACGAAAGGCTTCCTGT+TGG 0.636057 3_3:-78234334 Msa0475180:CDS
TTTATGTTCCGAGTGGATGG+TGG 0.637501 3_3:-78235012 Msa0475180:CDS
TTAAACTGGTCTGAGGTGAA+AGG 0.638216 3_3:-78232567 Msa0475180:CDS
TTCAAGATAAACAACCCCAC+TGG 0.638268 3_3:+78233081 None:intergenic
ATTGAATGTACACAACTACC+TGG 0.639305 3_3:-78235043 Msa0475180:CDS
GCAGAAGAGACAGACTATCG+TGG 0.640708 3_3:-78232698 Msa0475180:intron
CTAGGAATATGTTTCCTGAG+AGG 0.644586 3_3:+78233112 None:intergenic
ACTCCTTTATGACGATAACC+AGG 0.653563 3_3:+78234899 None:intergenic
CAAGAGCAAGCAAACCCACA+CGG 0.656542 3_3:+78234873 None:intergenic
GAGACAATTTATGTTCCGAG+TGG 0.659270 3_3:-78235019 Msa0475180:CDS
TCAAAGTACGAGTCAACAGA+GGG 0.660427 3_3:-78229967 Msa0475180:CDS
TCAGTGTGTATCCAAGAGCA+GGG 0.663517 3_3:+78231876 None:intergenic
AAGGAGGTAACTAGGACACC+AGG 0.663763 3_3:+78231734 None:intergenic
GTAATCCTTCAATAAGCTAG+GGG 0.667445 3_3:+78236667 None:intergenic
AAAAGTGCCTTTAGGTGTGA+CGG 0.668167 3_3:-78235303 Msa0475180:CDS
GGAGAGTTGAACAATTACAA+AGG 0.673689 3_3:-78227970 Msa0475180:CDS
GGTTTATTGAGTGACCACGT+TGG 0.675486 3_3:-78231765 Msa0475180:CDS
AAGAAGTTGAGATGACAGTG+TGG 0.676854 3_3:-78227993 Msa0475180:CDS
AGCTGGATCAACATGCCAAG+AGG 0.677057 3_3:+78236544 None:intergenic
TGTATAAAATGTATCCAGTG+TGG 0.684015 3_3:+78237868 None:intergenic
TATCCAGTGTGGTATGACAC+CGG 0.684470 3_3:+78237879 None:intergenic
ATAAACGACCATCCTATAGG+TGG 0.685021 3_3:-78236595 Msa0475180:CDS
AAACTTGGCCTCCTTCCTGG+GGG 0.689807 3_3:-78232664 Msa0475180:CDS
TGATAATTAAGCGATGTGAG+GGG 0.689937 3_3:-78232856 Msa0475180:CDS
AAGTACGAGTCAACAGAGGG+TGG 0.691127 3_3:-78229964 Msa0475180:CDS
ATGACTCTATGCCTAAAAGG+AGG 0.692833 3_3:-78238267 Msa0475180:CDS
TTATACAGAGGGTGGCAATG+TGG 0.697663 3_3:-78237852 Msa0475180:CDS
TCATAAAGGAGTCTGCCGTG+TGG 0.699636 3_3:-78234888 Msa0475180:CDS
ATACCGGTGTCATACCACAC+TGG 0.707579 3_3:-78237882 Msa0475180:CDS
CTGTATCTAAGATATCGAAG+AGG 0.711016 3_3:+78236618 None:intergenic
TAGGAATACTGGGATTCCGG+CGG 0.711408 3_3:-78232924 Msa0475180:CDS
ACGTGAATTAAACTGGTCTG+AGG 0.711510 3_3:-78232574 Msa0475180:CDS
GCTTTATGGTTTAGGCACAG+AGG 0.719101 3_3:-78233241 Msa0475180:intron
ATACAGAAGATGCTGCCGAG+GGG 0.739771 3_3:-78231794 Msa0475180:CDS
CAAGAGGCACCAGATCTCTG+TGG 0.740954 3_3:+78236560 None:intergenic
CATCACAGAGAAATGCAACG+TGG 0.742244 3_3:-78232990 Msa0475180:CDS
AAAGATCACTGAAATCAAGG+AGG 0.742693 3_3:+78231718 None:intergenic
ACCAGGATTTCACTCCAACG+TGG 0.759662 3_3:+78231751 None:intergenic
GATGTGGTAAAAGATGAAGG+TGG 0.808325 3_3:+78232631 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAAAATGAATAAAAC+AGG + chr3_3:78228742-78228761 None:intergenic 10.0%
!!! AACTTAAATTTTATGTAATT+TGG - chr3_3:78231466-78231485 Msa0475180:intron 10.0%
!! GATATAAATGAATTATTTAA+AGG + chr3_3:78234292-78234311 None:intergenic 10.0%
!! TGAAAAAAAAAAATTATGTT+GGG + chr3_3:78234924-78234943 None:intergenic 10.0%
!! ATGAAAAAAAAAAATTATGT+TGG + chr3_3:78234925-78234944 None:intergenic 10.0%
!!! ACATAATTTTTTTTTTTCAT+TGG - chr3_3:78234925-78234944 Msa0475180:CDS 10.0%
!!! AATTTTATAAATAGGATAAA+AGG - chr3_3:78235862-78235881 Msa0475180:intron 10.0%
!!! ATTTTATAAATAGGATAAAA+GGG - chr3_3:78235863-78235882 Msa0475180:intron 10.0%
!! ATATTAGAATTTAATCTTTA+AGG + chr3_3:78237974-78237993 None:intergenic 10.0%
!! TAAGAAATTCAAAATTCAAA+CGG + chr3_3:78228147-78228166 None:intergenic 15.0%
!! AATAGAAATAGTTTATACAT+AGG + chr3_3:78228263-78228282 None:intergenic 15.0%
!! ATATTTAATGCTAACATATT+TGG - chr3_3:78228757-78228776 Msa0475180:intron 15.0%
!!! TGAATTTTTTATTTGCATTA+TGG - chr3_3:78230434-78230453 Msa0475180:intron 15.0%
!!! TTCTTTTTCTAGTTAAAATT+AGG - chr3_3:78230588-78230607 Msa0475180:intron 15.0%
!! AATGCTTCATAAAAAATAAT+TGG - chr3_3:78232676-78232695 Msa0475180:CDS 15.0%
!!! ATTATATTCTAATTTTGAAG+CGG + chr3_3:78232730-78232749 None:intergenic 15.0%
!! AAAATTAGAATATAATTCAG+TGG - chr3_3:78232734-78232753 Msa0475180:intron 15.0%
!!! AATCATGAATTTTAAAAAGT+TGG + chr3_3:78233052-78233071 None:intergenic 15.0%
!! TTGTATGATTAATATTACAA+AGG + chr3_3:78233316-78233335 None:intergenic 15.0%
!! TTGTAATATTAATCATACAA+AGG - chr3_3:78233316-78233335 Msa0475180:intron 15.0%
!! ATAAATGAATTATTTAAAGG+TGG + chr3_3:78234289-78234308 None:intergenic 15.0%
!!! TTTAAAGTTTCAAAGTTTTA+TGG - chr3_3:78234574-78234593 Msa0475180:CDS 15.0%
!! AGTTATAAGATGTTATAAAT+TGG - chr3_3:78236376-78236395 Msa0475180:intron 15.0%
!!! TTTTTTTTCATTTATTTTGC+AGG - chr3_3:78236796-78236815 Msa0475180:intron 15.0%
!! TAAATTCAAATTGAAATACT+TGG + chr3_3:78237023-78237042 None:intergenic 15.0%
!! AGTATTTCAATTTGAATTTA+TGG - chr3_3:78237023-78237042 Msa0475180:intron 15.0%
!!! TGACATTAATTGTTAATTTT+TGG - chr3_3:78238508-78238527 Msa0475180:intron 15.0%
!!! GACATTAATTGTTAATTTTT+GGG - chr3_3:78238509-78238528 Msa0475180:intron 15.0%
!! ATAAAAATGTATTATCACTT+GGG + chr3_3:78239008-78239027 None:intergenic 15.0%
!! TATAAAAATGTATTATCACT+TGG + chr3_3:78239009-78239028 None:intergenic 15.0%
!!! TTTTTTTTTTTTGCGATTTA+CGG + chr3_3:78239212-78239231 None:intergenic 15.0%
!!! TTTGTTTTTATAAGCTATCT+TGG - chr3_3:78228327-78228346 Msa0475180:intron 20.0%
!! AAAGTTTCCTGAAAAAATAT+AGG + chr3_3:78228897-78228916 None:intergenic 20.0%
!! TCCTATTTATAAGAGAAAAT+TGG - chr3_3:78229342-78229361 Msa0475180:intron 20.0%
!! CCTATTTATAAGAGAAAATT+GGG - chr3_3:78229343-78229362 Msa0475180:intron 20.0%
!! CCTATTTATAAGAGAAAATT+GGG + chr3_3:78229343-78229362 None:intergenic 20.0%
!! TCCTATTTATAAGAGAAAAT+TGG + chr3_3:78229342-78229361 None:intergenic 20.0%
!!! ATTTTGCATTTTAGATATCT+TGG - chr3_3:78229788-78229807 Msa0475180:intron 20.0%
!!! TTGCATTTAAAATTTCTCAA+AGG - chr3_3:78229971-78229990 Msa0475180:CDS 20.0%
!! TTTCGTCGAAAATATATAAT+GGG + chr3_3:78230065-78230084 None:intergenic 20.0%
!!! TTTTCGTCGAAAATATATAA+TGG + chr3_3:78230066-78230085 None:intergenic 20.0%
!!! ATTATATATTTTCGACGAAA+AGG - chr3_3:78230065-78230084 Msa0475180:CDS 20.0%
!!! TGTTTTCAAATTTGAGATTT+TGG - chr3_3:78230161-78230180 Msa0475180:intron 20.0%
!!! TTTTAATTTAACCAACAGTT+TGG - chr3_3:78230197-78230216 Msa0475180:intron 20.0%
!!! GAATCATTAAAAGCATAAAA+TGG + chr3_3:78230827-78230846 None:intergenic 20.0%
!! TTTATTGAAACATTAACACT+AGG - chr3_3:78231279-78231298 Msa0475180:intron 20.0%
!!! TTTTAAGAATGCGTTAATTT+TGG + chr3_3:78231371-78231390 None:intergenic 20.0%
!! TAAATATTTAAATACGCTTC+TGG + chr3_3:78231403-78231422 None:intergenic 20.0%
!! AATTACTTAAACCCAAAAAA+AGG + chr3_3:78231709-78231728 None:intergenic 20.0%
!! TTTAAGTAATTATTGCCATT+AGG - chr3_3:78231718-78231737 Msa0475180:CDS 20.0%
!!! AAATTTCTTATCCATGTTTT+TGG - chr3_3:78232235-78232254 Msa0475180:intron 20.0%
!! TTACATAAATAAAAACTCAC+AGG + chr3_3:78232600-78232619 None:intergenic 20.0%
!! CATAAAAAATAATTGGTCAT+AGG - chr3_3:78232683-78232702 Msa0475180:CDS 20.0%
!! ATATTGATAAAGTACAGTAA+GGG + chr3_3:78232864-78232883 None:intergenic 20.0%
!! AATATTGATAAAGTACAGTA+AGG + chr3_3:78232865-78232884 None:intergenic 20.0%
!!! ACTGTACTTTATCAATATTT+TGG - chr3_3:78232866-78232885 Msa0475180:CDS 20.0%
!! GAAATTATTTATAAACCACA+AGG + chr3_3:78234093-78234112 None:intergenic 20.0%
!! AAAGAGAGTTTATAAACAAT+TGG + chr3_3:78234644-78234663 None:intergenic 20.0%
!!! TGATAAATGTATTCCATTTT+TGG - chr3_3:78234702-78234721 Msa0475180:CDS 20.0%
!!! GATAAATGTATTCCATTTTT+GGG - chr3_3:78234703-78234722 Msa0475180:CDS 20.0%
!! TATGGATGATAATATTTACA+TGG - chr3_3:78235045-78235064 Msa0475180:CDS 20.0%
!! TATGTGAGTAGAAATAAAAA+GGG - chr3_3:78235743-78235762 Msa0475180:intron 20.0%
!! TAACTAAATTTGTATTCTTG+AGG + chr3_3:78235787-78235806 None:intergenic 20.0%
!! TATAAGAAAATGCCATAAAT+AGG - chr3_3:78235809-78235828 Msa0475180:intron 20.0%
!! TTTGTATTCTATCCTATTTA+TGG + chr3_3:78235824-78235843 None:intergenic 20.0%
!!! AGAAATCAGAGAAATATTTT+GGG - chr3_3:78236072-78236091 Msa0475180:intron 20.0%
!!! TAATTTTAGAAACTGTTATG+TGG - chr3_3:78237161-78237180 Msa0475180:intron 20.0%
!!! TGATTGGTTAAAATTTACAT+CGG + chr3_3:78237569-78237588 None:intergenic 20.0%
!!! TAAATTTTAACCAATCAAAG+AGG - chr3_3:78237572-78237591 Msa0475180:intron 20.0%
!!! AAATTTTAACCAATCAAAGA+GGG - chr3_3:78237573-78237592 Msa0475180:intron 20.0%
!! TTTATTCTAGATCTGTTATT+GGG - chr3_3:78238004-78238023 Msa0475180:intron 20.0%
!!! TCTTTTCAATTTCATAATCA+AGG + chr3_3:78238408-78238427 None:intergenic 20.0%
!! ACATTAACAAATAACCAAAT+TGG + chr3_3:78238474-78238493 None:intergenic 20.0%
!!! TTTGGTTATTTGTTAATGTT+CGG - chr3_3:78238475-78238494 Msa0475180:intron 20.0%
!!! TTAATTTTTGGGTTTTTGAT+AGG - chr3_3:78238520-78238539 Msa0475180:intron 20.0%
!!! AATAAAAGGATATGGTTTTA+AGG + chr3_3:78238596-78238615 None:intergenic 20.0%
!! AATATTGGATATTTAATGAC+GGG + chr3_3:78238632-78238651 None:intergenic 20.0%
!! CAATATTGGATATTTAATGA+CGG + chr3_3:78238633-78238652 None:intergenic 20.0%
!!! CAAAACATTTTTGTTTGTAT+GGG + chr3_3:78238713-78238732 None:intergenic 20.0%
!!! TCTTTATTGTTTTTCATTGT+AGG - chr3_3:78238797-78238816 Msa0475180:intron 20.0%
!! AAATATTTAAATGCAGCAAA+TGG + chr3_3:78238961-78238980 None:intergenic 20.0%
!!! AGATATAACATTTTTTTCCT+TGG - chr3_3:78239176-78239195 Msa0475180:five_prime_UTR 20.0%
! GAAAGAAAGAAAAAAAAACG+CGG - chr3_3:78227726-78227745 Msa0475180:three_prime_UTR 25.0%
!! AAGTTCCATTTTAGATTTGA+TGG - chr3_3:78227829-78227848 Msa0475180:three_prime_UTR 25.0%
! AGAATCCATCAAATCTAAAA+TGG + chr3_3:78227837-78227856 None:intergenic 25.0%
!!! TTTTCCATATCGATTTGATA+AGG - chr3_3:78228023-78228042 Msa0475180:CDS 25.0%
! TGATTCATCACATTAATCAA+CGG - chr3_3:78228091-78228110 Msa0475180:intron 25.0%
! TTTATACTATTGCCATAAAC+AGG + chr3_3:78228119-78228138 None:intergenic 25.0%
! ATAAAGCTATTTATCCTAAC+AGG + chr3_3:78228199-78228218 None:intergenic 25.0%
! TCAAATAAGTCAATCTAAAC+AGG - chr3_3:78228455-78228474 Msa0475180:intron 25.0%
! ACTTTAGCTGTTATAAATGA+CGG - chr3_3:78228537-78228556 Msa0475180:intron 25.0%
!! AATGCTAACATATTTGGAAT+CGG - chr3_3:78228763-78228782 Msa0475180:intron 25.0%
! TTGTTACCATCAAAATGTAA+AGG + chr3_3:78228847-78228866 None:intergenic 25.0%
! TATGGAGTTAAAAAGTCATA+TGG - chr3_3:78228923-78228942 Msa0475180:intron 25.0%
!!! TCAACTCTTTGTTTTTGTAT+CGG - chr3_3:78228985-78229004 Msa0475180:intron 25.0%
! AATAAATGACATCTCAATGA+AGG - chr3_3:78229070-78229089 Msa0475180:intron 25.0%
! AATTCTTTAAATCTCTGTAC+CGG + chr3_3:78229125-78229144 None:intergenic 25.0%
!!! TTTTCCATTGTTTATTTTGC+TGG - chr3_3:78229251-78229270 Msa0475180:intron 25.0%
! AATTCCAGCAAAATAAACAA+TGG + chr3_3:78229258-78229277 None:intergenic 25.0%
!! TTTTCTCTTATAAATAGGAC+CGG + chr3_3:78229430-78229449 None:intergenic 25.0%
!! CCCAATTTTCTCTTATAAAT+AGG + chr3_3:78229425-78229444 None:intergenic 25.0%
!! CCCAATTTTCTCTTATAAAT+AGG - chr3_3:78229425-78229444 Msa0475180:intron 25.0%
!! TTTTCTCTTATAAATAGGAC+CGG - chr3_3:78229430-78229449 Msa0475180:intron 25.0%
!!! GTATTTCTCTTTTGAAAAAG+AGG - chr3_3:78229575-78229594 Msa0475180:intron 25.0%
!! AATTTTGAACCATCAAACAT+TGG - chr3_3:78229819-78229838 Msa0475180:intron 25.0%
! TGAAAACAAGAAAAACTGAA+AGG + chr3_3:78230149-78230168 None:intergenic 25.0%
!!! AGCATCTTTTTTACCTTTTA+CGG + chr3_3:78230409-78230428 None:intergenic 25.0%
! TAAGGCTTAAACTAAAAACA+AGG + chr3_3:78230521-78230540 None:intergenic 25.0%
! AAGCCTTAAACATAATTAGT+TGG - chr3_3:78230533-78230552 Msa0475180:intron 25.0%
! TAGCCAACTAATTATGTTTA+AGG + chr3_3:78230539-78230558 None:intergenic 25.0%
!! TATCCCCTTCATTAAATTTT+GGG + chr3_3:78230616-78230635 None:intergenic 25.0%
! AAAATTTAATGAAGGGGATA+GGG - chr3_3:78230616-78230635 Msa0475180:intron 25.0%
! AAATAGTTAAATGTCTACAG+AGG + chr3_3:78231010-78231029 None:intergenic 25.0%
!! GTAGACATTTAACTATTTTC+AGG - chr3_3:78231012-78231031 Msa0475180:intron 25.0%
!! TAGTTGAGTTTGATAATACT+TGG + chr3_3:78231103-78231122 None:intergenic 25.0%
! TTAATTATGCAGTAGTAGTA+CGG - chr3_3:78231140-78231159 Msa0475180:intron 25.0%
!!! ATTTTATGTAATTTGGTGCA+TGG - chr3_3:78231473-78231492 Msa0475180:intron 25.0%
!!! GATCTACATATCCTTTTTTT+GGG - chr3_3:78231695-78231714 Msa0475180:intron 25.0%
! TAACTTCGAATTTGTATGTT+TGG - chr3_3:78231965-78231984 Msa0475180:intron 25.0%
! TGTTTAGAAAGAGAAATAAG+TGG - chr3_3:78232164-78232183 Msa0475180:intron 25.0%
! TTTCCATAAATTATAGCTTC+TGG + chr3_3:78232195-78232214 None:intergenic 25.0%
! AGAAGCTATAATTTATGGAA+AGG - chr3_3:78232194-78232213 Msa0475180:intron 25.0%
! GGATCATTTAGAAAATTAGA+AGG - chr3_3:78232755-78232774 Msa0475180:intron 25.0%
!! AGAAAATTAGAAGGATTTTC+TGG - chr3_3:78232764-78232783 Msa0475180:intron 25.0%
!! TGAGAATTTGTTTCTTACAA+GGG + chr3_3:78232826-78232845 None:intergenic 25.0%
!! ATGAGAATTTGTTTCTTACA+AGG + chr3_3:78232827-78232846 None:intergenic 25.0%
!!! CAAAGCATAGTTTTAAAACT+CGG + chr3_3:78233264-78233283 None:intergenic 25.0%
! TATTAATCATACAAAGGAGT+CGG - chr3_3:78233322-78233341 Msa0475180:intron 25.0%
! AAAATTTCTCTTCAAACAGT+CGG - chr3_3:78233380-78233399 Msa0475180:intron 25.0%
!! ACATTTTCCATTCTGTAAAT+AGG - chr3_3:78233573-78233592 Msa0475180:intron 25.0%
! AGATAAACCTATTTACAGAA+TGG + chr3_3:78233583-78233602 None:intergenic 25.0%
! TGTAAATAGGTTTATCTAGT+GGG - chr3_3:78233586-78233605 Msa0475180:intron 25.0%
! AATCCTATACCAATTTAAGT+TGG - chr3_3:78233841-78233860 Msa0475180:intron 25.0%
!! ATCCTATACCAATTTAAGTT+GGG - chr3_3:78233842-78233861 Msa0475180:intron 25.0%
! CATCGCTTAATTATCAAATA+TGG + chr3_3:78234035-78234054 None:intergenic 25.0%
! ATATTGAACGTGAATTAAAC+TGG - chr3_3:78234314-78234333 Msa0475180:intron 25.0%
! ATAAAACTAAGTATACCACT+TGG + chr3_3:78234455-78234474 None:intergenic 25.0%
! TATCCTGTTTATCAAGAAAT+TGG + chr3_3:78234486-78234505 None:intergenic 25.0%
!!! TATAAACTCTCTTTTGACTT+TGG - chr3_3:78234650-78234669 Msa0475180:CDS 25.0%
!!! GCTTCACATTTTTATTTGTA+TGG - chr3_3:78234754-78234773 Msa0475180:CDS 25.0%
!!! TCACATTTTTATTTGTATGG+CGG - chr3_3:78234757-78234776 Msa0475180:CDS 25.0%
! TAAGCTGCTAAATATAAATG+AGG - chr3_3:78234874-78234893 Msa0475180:CDS 25.0%
! TGAAGTTGGATGTAAATTTA+TGG + chr3_3:78235236-78235255 None:intergenic 25.0%
! TAAGCCATTTCTAATAAAGA+CGG + chr3_3:78235266-78235285 None:intergenic 25.0%
! TTATTAGAAATGGCTTACAT+TGG - chr3_3:78235269-78235288 Msa0475180:CDS 25.0%
! TGTGGTATCATAATTTATCA+AGG - chr3_3:78235305-78235324 Msa0475180:CDS 25.0%
! GTGGTATCATAATTTATCAA+GGG - chr3_3:78235306-78235325 Msa0475180:CDS 25.0%
! TGGTATCATAATTTATCAAG+GGG - chr3_3:78235307-78235326 Msa0475180:CDS 25.0%
! AAAATTAAACCCTACATGTA+GGG + chr3_3:78235419-78235438 None:intergenic 25.0%
! TTGGCTGAAAATCATAAAAA+TGG + chr3_3:78235472-78235491 None:intergenic 25.0%
!!! TTTTGTTATGAAGTCATTGT+TGG - chr3_3:78235553-78235572 Msa0475180:intron 25.0%
! GTATGTGAGTAGAAATAAAA+AGG - chr3_3:78235742-78235761 Msa0475180:intron 25.0%
!! CAGAAATCAGAGAAATATTT+TGG - chr3_3:78236071-78236090 Msa0475180:intron 25.0%
!!! TAGTTTTTGAAGTCAATTAG+TGG + chr3_3:78236108-78236127 None:intergenic 25.0%
!! TAATTGACTTCAAAAACTAC+TGG - chr3_3:78236109-78236128 Msa0475180:intron 25.0%
!!! TACTGGTTCATTATTGTTTT+GGG - chr3_3:78236126-78236145 Msa0475180:intron 25.0%
!!! TAGTTTTTGAAGTCAATTAG+TGG + chr3_3:78236108-78236127 None:intergenic 25.0%
!! TAATTGACTTCAAAAACTAC+TGG - chr3_3:78236109-78236128 Msa0475180:intron 25.0%
! TATGTGAGGAGAAATAAAAA+GGG - chr3_3:78236309-78236328 Msa0475180:intron 25.0%
! TAAATAATAGCTAGCTAACA+GGG - chr3_3:78236337-78236356 Msa0475180:intron 25.0%
! GATGTTATAAATTGGTGAAA+CGG - chr3_3:78236384-78236403 Msa0475180:intron 25.0%
! ATGTTATAAATTGGTGAAAC+GGG - chr3_3:78236385-78236404 Msa0475180:intron 25.0%
!! AGAGAGAATGTTTTCTTAAT+GGG + chr3_3:78236519-78236538 None:intergenic 25.0%
! TCTCTCTATATCTATATCTA+TGG - chr3_3:78236534-78236553 Msa0475180:CDS 25.0%
!!! TTGTTTTAACCTTTTTCGAA+CGG - chr3_3:78236572-78236591 Msa0475180:CDS 25.0%
! GTTTCAAAAATATCTTTGAG+TGG + chr3_3:78236731-78236750 None:intergenic 25.0%
! AAAACATTAGATTCCTTTCA+CGG + chr3_3:78236763-78236782 None:intergenic 25.0%
! ATTGGTATCAAGTCAAAAAT+AGG + chr3_3:78236826-78236845 None:intergenic 25.0%
! TGACTTGATACCAATTTATT+TGG - chr3_3:78236831-78236850 Msa0475180:CDS 25.0%
! CTAAACACATCCAAATAAAT+TGG + chr3_3:78236844-78236863 None:intergenic 25.0%
! ATTTATTTGGATGTGTTTAG+AGG - chr3_3:78236844-78236863 Msa0475180:CDS 25.0%
! GTTTATTCTAGATCTGTTAT+TGG - chr3_3:78238003-78238022 Msa0475180:intron 25.0%
!! AAAGCTCAAATTCTAAGAAA+TGG - chr3_3:78238245-78238264 Msa0475180:CDS 25.0%
! AAAAGAAACTGATCTTTGTA+TGG - chr3_3:78238422-78238441 Msa0475180:intron 25.0%
! TGGAATTGAATAAAAGGATA+TGG + chr3_3:78238604-78238623 None:intergenic 25.0%
! GTGAAATGGAATTGAATAAA+AGG + chr3_3:78238610-78238629 None:intergenic 25.0%
! AAACACTATTTAGGCAATAT+TGG + chr3_3:78238647-78238666 None:intergenic 25.0%
!!! GCAAAACATTTTTGTTTGTA+TGG + chr3_3:78238714-78238733 None:intergenic 25.0%
! TTGCTGCATTTAAATATTTC+CGG - chr3_3:78238962-78238981 Msa0475180:CDS 25.0%
AAAATGAAAGCAAACGATGA+AGG + chr3_3:78228006-78228025 None:intergenic 30.0%
GATTCCTTATCAAATCGATA+TGG + chr3_3:78228030-78228049 None:intergenic 30.0%
!! TATCGATTTGATAAGGAATC+TGG - chr3_3:78228030-78228049 Msa0475180:CDS 30.0%
TGTTTCATTCAAGTACACTT+TGG - chr3_3:78228059-78228078 Msa0475180:CDS 30.0%
CTATTACAAAAGATAGCACA+AGG - chr3_3:78228278-78228297 Msa0475180:intron 30.0%
!!! TCTGGTTTTCTTCAATACAA+AGG - chr3_3:78228655-78228674 Msa0475180:intron 30.0%
!!! GATCTGTCCTATATTTTTTC+AGG - chr3_3:78228887-78228906 Msa0475180:intron 30.0%
! TTTTGTATCGGAGATTATAC+CGG - chr3_3:78228997-78229016 Msa0475180:intron 30.0%
TGTATAAAATGTATCCAGTG+TGG + chr3_3:78229030-78229049 None:intergenic 30.0%
! ACTGGATACATTTTATACAG+AGG - chr3_3:78229031-78229050 Msa0475180:intron 30.0%
! CTGGATACATTTTATACAGA+GGG - chr3_3:78229032-78229051 Msa0475180:intron 30.0%
TCAACAAAACTTGATGTATC+TGG - chr3_3:78229366-78229385 Msa0475180:intron 30.0%
!! TCAACAAAAGTTGATGTATC+TGG + chr3_3:78229405-78229424 None:intergenic 30.0%
TAAAAAAGAGATACTACCTC+CGG + chr3_3:78229452-78229471 None:intergenic 30.0%
TAAAAAATGACCAGTTTACG+AGG - chr3_3:78229489-78229508 Msa0475180:intron 30.0%
ATCTTTACAAGAAAAAGCTG+GGG + chr3_3:78229698-78229717 None:intergenic 30.0%
CATCTTTACAAGAAAAAGCT+GGG + chr3_3:78229699-78229718 None:intergenic 30.0%
AGTAATCCTTCAATAAGCTA+GGG + chr3_3:78230232-78230251 None:intergenic 30.0%
AACATAATTAGTTGGCTACT+CGG - chr3_3:78230541-78230560 Msa0475180:intron 30.0%
! CTATCCCCTTCATTAAATTT+TGG + chr3_3:78230617-78230636 None:intergenic 30.0%
CAAAATTTAATGAAGGGGAT+AGG - chr3_3:78230615-78230634 Msa0475180:intron 30.0%
!!! ATCAGTTTTTTTTTCCCCAT+TGG - chr3_3:78230689-78230708 Msa0475180:intron 30.0%
!!! TCAGTTTTTTTTTCCCCATT+GGG - chr3_3:78230690-78230709 Msa0475180:intron 30.0%
AACAGAACAACATATTTGCA+TGG + chr3_3:78230754-78230773 None:intergenic 30.0%
! ATTCAAAGCAAAGTTTTCTC+TGG - chr3_3:78230843-78230862 Msa0475180:intron 30.0%
!! TTCTCTGGAATTTGTAAGAT+TGG - chr3_3:78230858-78230877 Msa0475180:intron 30.0%
! GATTCAAGAGTCATTGTTTT+AGG + chr3_3:78230988-78231007 None:intergenic 30.0%
! TTTTAACATGACAAGAGTGA+AGG + chr3_3:78231226-78231245 None:intergenic 30.0%
!! GCTAATAGAATGTGTTGATT+TGG + chr3_3:78231257-78231276 None:intergenic 30.0%
TGAAACATTAACACTAGGAT+AGG - chr3_3:78231284-78231303 Msa0475180:intron 30.0%
! TTTTTCCAATTAAGCAAACC+TGG + chr3_3:78231311-78231330 None:intergenic 30.0%
TTTAAGAAAGTGAAACTGCA+TGG - chr3_3:78231344-78231363 Msa0475180:intron 30.0%
ACGCATTCTTAAAACTACAA+TGG - chr3_3:78231377-78231396 Msa0475180:intron 30.0%
CCTCTTGAGCATTAATTATT+TGG + chr3_3:78231527-78231546 None:intergenic 30.0%
CCAAATAATTAATGCTCAAG+AGG - chr3_3:78231524-78231543 Msa0475180:intron 30.0%
TGTCTTGCTTAATATTTGCT+AGG - chr3_3:78231549-78231568 Msa0475180:intron 30.0%
! TTGCTTAATATTTGCTAGGT+GGG - chr3_3:78231553-78231572 Msa0475180:intron 30.0%
!!! CGATCTACATATCCTTTTTT+TGG - chr3_3:78231694-78231713 Msa0475180:intron 30.0%
ACATTTATGTTTGCTTACAG+TGG - chr3_3:78231787-78231806 Msa0475180:CDS 30.0%
!! GTGGCACTGTATTTTAAATT+TGG - chr3_3:78231902-78231921 Msa0475180:CDS 30.0%
CGAATTTGTATGTTTGGATA+TGG - chr3_3:78231971-78231990 Msa0475180:intron 30.0%
! TAAGTTACTCTGATTTGTCA+AGG - chr3_3:78232099-78232118 Msa0475180:intron 30.0%
CATCCAGAAGCTATAATTTA+TGG - chr3_3:78232189-78232208 Msa0475180:intron 30.0%
AGCTATAATTTATGGAAAGG+TGG - chr3_3:78232197-78232216 Msa0475180:intron 30.0%
!!! CTTATCCATGTTTTTGGATA+AGG - chr3_3:78232241-78232260 Msa0475180:intron 30.0%
TCTATCCTTATCCAAAAACA+TGG + chr3_3:78232249-78232268 None:intergenic 30.0%
CATATTAGATCTCTCATATC+TGG + chr3_3:78232359-78232378 None:intergenic 30.0%
CAGATATGAGAGATCTAATA+TGG - chr3_3:78232357-78232376 Msa0475180:intron 30.0%
TATGAGAGATCTAATATGGA+AGG - chr3_3:78232361-78232380 Msa0475180:intron 30.0%
! TTTTCTGTTTATACATGTCC+AGG - chr3_3:78232455-78232474 Msa0475180:intron 30.0%
TTTCTGTTTATACATGTCCA+GGG - chr3_3:78232456-78232475 Msa0475180:intron 30.0%
!! CAATATTTTGGACCTGTATT+TGG - chr3_3:78232878-78232897 Msa0475180:CDS 30.0%
! TGTAATTAGTCTCCAAATAC+AGG + chr3_3:78232893-78232912 None:intergenic 30.0%
AGACTAATTACAACAGTCTT+AGG - chr3_3:78232901-78232920 Msa0475180:CDS 30.0%
TTAAAAAGTTGGAGCCTATA+GGG + chr3_3:78233041-78233060 None:intergenic 30.0%
TTTAAAAAGTTGGAGCCTAT+AGG + chr3_3:78233042-78233061 None:intergenic 30.0%
! AATTACATGACCGATTCATA+AGG - chr3_3:78233178-78233197 Msa0475180:intron 30.0%
!!! CGAGTTTTAAAACTATGCTT+TGG - chr3_3:78233262-78233281 Msa0475180:CDS 30.0%
!!! GTTTTAAAACTATGCTTTGG+TGG - chr3_3:78233265-78233284 Msa0475180:CDS 30.0%
CAGCAATTAGTAAAACATGA+TGG - chr3_3:78233348-78233367 Msa0475180:intron 30.0%
!! TCATTCTGAAATTATCTCGT+TGG - chr3_3:78233405-78233424 Msa0475180:intron 30.0%
AAGCAGAATCATAAGAAACA+TGG + chr3_3:78233473-78233492 None:intergenic 30.0%
TGAATGACTATACCAAAAAC+CGG + chr3_3:78233514-78233533 None:intergenic 30.0%
CTGTAAATAGGTTTATCTAG+TGG - chr3_3:78233585-78233604 Msa0475180:intron 30.0%
GTAAATAGGTTTATCTAGTG+GGG - chr3_3:78233587-78233606 Msa0475180:intron 30.0%
! GTTAAGATTTTTGTCGAAGA+AGG - chr3_3:78233619-78233638 Msa0475180:intron 30.0%
AGTTAGATATGTACAGAAGA+TGG + chr3_3:78233706-78233725 None:intergenic 30.0%
GAAACATATTCCTAGTGTTA+TGG - chr3_3:78233791-78233810 Msa0475180:intron 30.0%
ATCCCAACTTAAATTGGTAT+AGG + chr3_3:78233847-78233866 None:intergenic 30.0%
!! TATACCAATTTAAGTTGGGA+TGG - chr3_3:78233846-78233865 Msa0475180:intron 30.0%
! TTTTCCATCCCAACTTAAAT+TGG + chr3_3:78233853-78233872 None:intergenic 30.0%
!! AATTTAAGTTGGGATGGAAA+AGG - chr3_3:78233852-78233871 Msa0475180:intron 30.0%
TTGTTTGAGTATAGGAATAC+TGG - chr3_3:78233960-78233979 Msa0475180:intron 30.0%
TGTTTGAGTATAGGAATACT+GGG - chr3_3:78233961-78233980 Msa0475180:intron 30.0%
! TTTGATAATTAAGCGATGTG+AGG - chr3_3:78234037-78234056 Msa0475180:intron 30.0%
! TTGATAATTAAGCGATGTGA+GGG - chr3_3:78234038-78234057 Msa0475180:intron 30.0%
ACAATATTAAGAGAGTTGTG+TGG + chr3_3:78234156-78234175 None:intergenic 30.0%
GAATTATTTAAAGGTGGATG+TGG + chr3_3:78234283-78234302 None:intergenic 30.0%
AATCTTAACAAAGAAGAGGA+AGG - chr3_3:78234411-78234430 Msa0475180:CDS 30.0%
TCTCCAATTTCTTGATAAAC+AGG - chr3_3:78234480-78234499 Msa0475180:intron 30.0%
! TTATGGCTTTTCCTGATTAA+AGG - chr3_3:78234591-78234610 Msa0475180:CDS 30.0%
!!! ATTAAAGGAAGTGCTACTTT+TGG - chr3_3:78234606-78234625 Msa0475180:CDS 30.0%
TGGAATACATTTATCATGCA+TGG + chr3_3:78234698-78234717 None:intergenic 30.0%
!! CACATTTTTATTTGTATGGC+GGG - chr3_3:78234758-78234777 Msa0475180:CDS 30.0%
!! ATTTTCTCAATCAGTTTGCT+AGG + chr3_3:78234827-78234846 None:intergenic 30.0%
TAGAAAGATCACTGAAATCA+AGG + chr3_3:78235183-78235202 None:intergenic 30.0%
TGATTTCAGTGATCTTTCTA+TGG - chr3_3:78235183-78235202 Msa0475180:intron 30.0%
GATTTCAGTGATCTTTCTAT+GGG - chr3_3:78235184-78235203 Msa0475180:intron 30.0%
TGGATGTAAATTTATGGAAC+AGG + chr3_3:78235230-78235249 None:intergenic 30.0%
ATACCCGTCTTTATTAGAAA+TGG - chr3_3:78235259-78235278 Msa0475180:CDS 30.0%
AAGCCATTTCTAATAAAGAC+GGG + chr3_3:78235265-78235284 None:intergenic 30.0%
ATAATCTTGCAGATACTGAA+AGG + chr3_3:78235333-78235352 None:intergenic 30.0%
!! GTTTTCTTTAAAGAAGAGCA+AGG - chr3_3:78235379-78235398 Msa0475180:intron 30.0%
AAATTAAACCCTACATGTAG+GGG + chr3_3:78235418-78235437 None:intergenic 30.0%
GAAAATTAAACCCTACATGT+AGG + chr3_3:78235420-78235439 None:intergenic 30.0%
GAAAATCATAAAAATGGTGG+AGG + chr3_3:78235466-78235485 None:intergenic 30.0%
GCTGAAAATCATAAAAATGG+TGG + chr3_3:78235469-78235488 None:intergenic 30.0%
ATTACATGCAGAACATCATT+TGG + chr3_3:78235491-78235510 None:intergenic 30.0%
ACATACACTTTCTTAATGAC+TGG + chr3_3:78235604-78235623 None:intergenic 30.0%
ATAGGATAAAAGGGAATTTG+TGG - chr3_3:78235872-78235891 Msa0475180:intron 30.0%
TAGGATAAAAGGGAATTTGT+GGG - chr3_3:78235873-78235892 Msa0475180:intron 30.0%
GGTGTTAAAATCGGAAATAA+CGG - chr3_3:78235900-78235919 Msa0475180:intron 30.0%
!!! CTACTGGTTCATTATTGTTT+TGG - chr3_3:78236125-78236144 Msa0475180:intron 30.0%
!!! TGTTTTGGGAAAAATGTTTC+TGG - chr3_3:78236140-78236159 Msa0475180:intron 30.0%
ATCATCATTAACCCTTTGTT+TGG - chr3_3:78236170-78236189 Msa0475180:intron 30.0%
AAACATCATAGCCAAACAAA+GGG + chr3_3:78236184-78236203 None:intergenic 30.0%
TAAACATCATAGCCAAACAA+AGG + chr3_3:78236185-78236204 None:intergenic 30.0%
CAAATATCATTGGCAAACTT+GGG + chr3_3:78236263-78236282 None:intergenic 30.0%
TCAAATATCATTGGCAAACT+TGG + chr3_3:78236264-78236283 None:intergenic 30.0%
GGTCTACTATCAAATATCAT+TGG + chr3_3:78236273-78236292 None:intergenic 30.0%
GTATGTGAGGAGAAATAAAA+AGG - chr3_3:78236308-78236327 Msa0475180:intron 30.0%
GTAAATAATAGCTAGCTAAC+AGG - chr3_3:78236336-78236355 Msa0475180:intron 30.0%
!! AATGTTTTCTTAATGGGTCT+TGG + chr3_3:78236513-78236532 None:intergenic 30.0%
! GAGAGAGAATGTTTTCTTAA+TGG + chr3_3:78236520-78236539 None:intergenic 30.0%
AGATTTGAGAGATAAACAGA+TGG + chr3_3:78236644-78236663 None:intergenic 30.0%
AATTCATAAGTGACTCCATT+TGG - chr3_3:78236685-78236704 Msa0475180:intron 30.0%
AAACATATTATTGCCGTGAA+AGG - chr3_3:78236747-78236766 Msa0475180:intron 30.0%
! AGTTACAAACTTCCTTTTTC+TGG - chr3_3:78236898-78236917 Msa0475180:CDS 30.0%
TTTGATATGTTGCCAGAAAA+AGG + chr3_3:78236913-78236932 None:intergenic 30.0%
ATATACCTATAACCCTGATA+AGG - chr3_3:78237067-78237086 Msa0475180:intron 30.0%
!!! CAATAGATCTAAGTTGGTTT+TGG + chr3_3:78237100-78237119 None:intergenic 30.0%
TGAACAGACATAATCTCTTA+AGG - chr3_3:78237370-78237389 Msa0475180:intron 30.0%
TGCTTTAATAATGTGTACCT+TGG - chr3_3:78237422-78237441 Msa0475180:intron 30.0%
TCTAACATTAAACAACACCA+AGG + chr3_3:78237442-78237461 None:intergenic 30.0%
CGGACCTACAAAATTTATAT+GGG + chr3_3:78237549-78237568 None:intergenic 30.0%
TCGGACCTACAAAATTTATA+TGG + chr3_3:78237550-78237569 None:intergenic 30.0%
TCAACTACTAATACCTAGTT+GGG + chr3_3:78237713-78237732 None:intergenic 30.0%
TAACAATCACAAAACAAGGT+GGG + chr3_3:78237796-78237815 None:intergenic 30.0%
TTAACAATCACAAAACAAGG+TGG + chr3_3:78237797-78237816 None:intergenic 30.0%
GAGTTAACAATCACAAAACA+AGG + chr3_3:78237800-78237819 None:intergenic 30.0%
AACTAAGTTTCTATTGATGC+TGG - chr3_3:78237844-78237863 Msa0475180:CDS 30.0%
TCTAACTTCTAAGCAAGATA+AGG - chr3_3:78238070-78238089 Msa0475180:CDS 30.0%
!! GCAAGATAAGGTATTGTTAT+TGG - chr3_3:78238082-78238101 Msa0475180:CDS 30.0%
!!! TCATCTATTGAACTAGCTTT+TGG - chr3_3:78238206-78238225 Msa0475180:CDS 30.0%
!!! CATCTATTGAACTAGCTTTT+GGG - chr3_3:78238207-78238226 Msa0475180:CDS 30.0%
!!! AGGTTTACTGACTTTTCTTT+TGG - chr3_3:78238448-78238467 Msa0475180:intron 30.0%
AGTAAAATAGCATGGAATAG+AGG + chr3_3:78238569-78238588 None:intergenic 30.0%
AAGGTATGAGTAAAATAGCA+TGG + chr3_3:78238577-78238596 None:intergenic 30.0%
!! ATATTTAATGACGGGTGAAA+TGG + chr3_3:78238624-78238643 None:intergenic 30.0%
ACTCACATCAAACACTATTT+AGG + chr3_3:78238656-78238675 None:intergenic 30.0%
TTTACGGTTAATTTAAGCCA+AGG + chr3_3:78239196-78239215 None:intergenic 30.0%
!! AATCACTTTTGCCTATGTGA+TGG - chr3_3:78227650-78227669 Msa0475180:three_prime_UTR 35.0%
GAAAAAAAAACGCGGTTAAG+AGG - chr3_3:78227734-78227753 Msa0475180:three_prime_UTR 35.0%
AATTGAGCAGAGGATTTCAT+CGG + chr3_3:78227927-78227946 None:intergenic 35.0%
TAATCAACGGAACCTGTTTA+TGG - chr3_3:78228104-78228123 Msa0475180:intron 35.0%
TGATTGATTACGATCCTGTT+AGG - chr3_3:78228182-78228201 Msa0475180:intron 35.0%
TATCCAATGAAGAACCACTA+TGG - chr3_3:78228605-78228624 Msa0475180:intron 35.0%
TTCTTCAATACAAAGGCTCT+TGG - chr3_3:78228662-78228681 Msa0475180:intron 35.0%
ATAGGACAGATCAGATTCTT+AGG + chr3_3:78228879-78228898 None:intergenic 35.0%
!! TCAGGAAACTTTTTGCTGTA+TGG - chr3_3:78228905-78228924 Msa0475180:intron 35.0%
! GATACATTTTATACAGAGGG+TGG - chr3_3:78229035-78229054 Msa0475180:intron 35.0%
CAAGTATGACATGAAGAAAC+CGG - chr3_3:78229103-78229122 Msa0475180:intron 35.0%
! ATAAACTTTTCCCCTCTTGT+TGG - chr3_3:78229160-78229179 Msa0475180:intron 35.0%
GGAAGACAGCTCAAAATTAA+TGG + chr3_3:78229203-78229222 None:intergenic 35.0%
! TTAATTTTGAGCTGTCTTCC+TGG - chr3_3:78229203-78229222 Msa0475180:intron 35.0%
AACAATGGAAAATAGAGCTC+AGG + chr3_3:78229243-78229262 None:intergenic 35.0%
TGTGAAAGAAATGAATGCTG+TGG - chr3_3:78229280-78229299 Msa0475180:intron 35.0%
!!! ACGTTTTAAAGTCAACACAC+TGG + chr3_3:78229515-78229534 None:intergenic 35.0%
!! AGTGTGTTGACTTTAAAACG+TGG - chr3_3:78229514-78229533 Msa0475180:intron 35.0%
!! TCTTGATCTCTGAAGCATTT+GGG - chr3_3:78229654-78229673 Msa0475180:intron 35.0%
CCATCTTTACAAGAAAAAGC+TGG + chr3_3:78229700-78229719 None:intergenic 35.0%
!! CCAGCTTTTTCTTGTAAAGA+TGG - chr3_3:78229697-78229716 Msa0475180:intron 35.0%
ACTATAACCCAACTACACAA+AGG + chr3_3:78229766-78229785 None:intergenic 35.0%
TTTGAACCATCAAACATTGG+TGG - chr3_3:78229822-78229841 Msa0475180:intron 35.0%
AGAAAACCACCAATGTTTGA+TGG + chr3_3:78229831-78229850 None:intergenic 35.0%
GATCAGCTGTTACAAAACTA+TGG - chr3_3:78229943-78229962 Msa0475180:CDS 35.0%
! GAACTTCATGGAGATCTTTT+TGG + chr3_3:78230001-78230020 None:intergenic 35.0%
AAAGATCTCCATGAAGTTCA+AGG - chr3_3:78230002-78230021 Msa0475180:CDS 35.0%
GACATAATCCTTGAACTTCA+TGG + chr3_3:78230013-78230032 None:intergenic 35.0%
CAAGGATTATGTCTCATACA+TGG - chr3_3:78230020-78230039 Msa0475180:CDS 35.0%
!! AGGGAAGAGCATTATTGAAA+CGG + chr3_3:78230110-78230129 None:intergenic 35.0%
AAAACTGAAAGGAGTAGTGT+GGG + chr3_3:78230138-78230157 None:intergenic 35.0%
AAAAACTGAAAGGAGTAGTG+TGG + chr3_3:78230139-78230158 None:intergenic 35.0%
GTAATCCTTCAATAAGCTAG+GGG + chr3_3:78230231-78230250 None:intergenic 35.0%
CAGTAATCCTTCAATAAGCT+AGG + chr3_3:78230233-78230252 None:intergenic 35.0%
AGGTCTTCTTGAAAAAGATG+AGG + chr3_3:78230260-78230279 None:intergenic 35.0%
! CTGTATCTAAGATATCGAAG+AGG + chr3_3:78230280-78230299 None:intergenic 35.0%
ATTATAAGCCACCTATAGGA+TGG + chr3_3:78230311-78230330 None:intergenic 35.0%
TCCTATAGGTGGCTTATAAT+TGG - chr3_3:78230311-78230330 Msa0475180:intron 35.0%
TCCAATTATAAGCCACCTAT+AGG + chr3_3:78230315-78230334 None:intergenic 35.0%
!!! TGGTTTTGAATCATGTAGCT+TGG - chr3_3:78230454-78230473 Msa0475180:intron 35.0%
AGATACCATGTAAACAGTCA+TGG + chr3_3:78230481-78230500 None:intergenic 35.0%
AGGCTCCCAAAATTTAATGA+AGG - chr3_3:78230608-78230627 Msa0475180:intron 35.0%
GGCTCCCAAAATTTAATGAA+GGG - chr3_3:78230609-78230628 Msa0475180:intron 35.0%
GCTCCCAAAATTTAATGAAG+GGG - chr3_3:78230610-78230629 Msa0475180:intron 35.0%
!! GAGAGTGCTAATATCTTGTT+AGG - chr3_3:78230919-78230938 Msa0475180:intron 35.0%
! CTTGCTTAATATTTGCTAGG+TGG - chr3_3:78231552-78231571 Msa0475180:intron 35.0%
GTGCATGTTAATGAAGAAGA+TGG - chr3_3:78231614-78231633 Msa0475180:intron 35.0%
CAATGTAGTTGACATCCTAA+TGG + chr3_3:78231736-78231755 None:intergenic 35.0%
TTTATGTTTGCTTACAGTGG+TGG - chr3_3:78231790-78231809 Msa0475180:CDS 35.0%
GGTAGTTGTGTACATTCAAT+TGG + chr3_3:78231852-78231871 None:intergenic 35.0%
ATTGAATGTACACAACTACC+TGG - chr3_3:78231852-78231871 Msa0475180:CDS 35.0%
! GTCTACATCTTTCAGAGTTT+TGG + chr3_3:78232138-78232157 None:intergenic 35.0%
! TGGTTTTTGAATCCAAAGCT+TGG + chr3_3:78232339-78232358 None:intergenic 35.0%
!! TGAAGGCACAAATTTTTGAC+AGG + chr3_3:78232521-78232540 None:intergenic 35.0%
AGCGGTCATCAATATTGTTT+GGG + chr3_3:78232712-78232731 None:intergenic 35.0%
AAGCGGTCATCAATATTGTT+TGG + chr3_3:78232713-78232732 None:intergenic 35.0%
TTGATAAAGTACAGTAAGGG+AGG + chr3_3:78232861-78232880 None:intergenic 35.0%
AGTCTCGATGCAAATATGAA+AGG + chr3_3:78232956-78232975 None:intergenic 35.0%
CTAGAACAAGTTACCTTTGT+AGG - chr3_3:78232974-78232993 Msa0475180:CDS 35.0%
AACAAGTTACCTTTGTAGGA+AGG - chr3_3:78232978-78232997 Msa0475180:CDS 35.0%
CCGGTATAACATTAAATGCA+CGG + chr3_3:78233086-78233105 None:intergenic 35.0%
CCGTGCATTTAATGTTATAC+CGG - chr3_3:78233083-78233102 Msa0475180:CDS 35.0%
AAGGCATAAAGATAGTATGC+AGG + chr3_3:78233297-78233316 None:intergenic 35.0%
TAGCATATCATGCCAAGTTA+TGG + chr3_3:78233437-78233456 None:intergenic 35.0%
TTTGAATTCTGACATGAGAC+CGG - chr3_3:78233492-78233511 Msa0475180:intron 35.0%
! AGTTAGAGTTTTACAGTCTG+CGG - chr3_3:78233745-78233764 Msa0475180:intron 35.0%
TAGGAATATGTTTCCTGAGA+GGG + chr3_3:78233785-78233804 None:intergenic 35.0%
TTGCTCTTCAAAATGACACT+GGG + chr3_3:78233882-78233901 None:intergenic 35.0%
ATTGCTCTTCAAAATGACAC+TGG + chr3_3:78233883-78233902 None:intergenic 35.0%
GCAAGCAATTGTTTGAGTAT+AGG - chr3_3:78233952-78233971 Msa0475180:intron 35.0%
TGATAATTAAGCGATGTGAG+GGG - chr3_3:78234039-78234058 Msa0475180:intron 35.0%
TTCAAATTTCCTACTTCTGC+AGG - chr3_3:78234130-78234149 Msa0475180:intron 35.0%
AATCAAACAATGCAGCAGAA+TGG - chr3_3:78234374-78234393 Msa0475180:CDS 35.0%
ATCAAACAATGCAGCAGAAT+GGG - chr3_3:78234375-78234394 Msa0475180:CDS 35.0%
CCTCTTCTTTGTTAAGATTC+TGG + chr3_3:78234410-78234429 None:intergenic 35.0%
CCAGAATCTTAACAAAGAAG+AGG - chr3_3:78234407-78234426 Msa0475180:CDS 35.0%
AAGTATACCACTTGGTCAAA+CGG + chr3_3:78234447-78234466 None:intergenic 35.0%
GATAGTTCAAGAATGAGAGA+GGG - chr3_3:78234502-78234521 Msa0475180:intron 35.0%
ATAGTTCAAGAATGAGAGAG+GGG - chr3_3:78234503-78234522 Msa0475180:intron 35.0%
AAGTAGCACTTCCTTTAATC+AGG + chr3_3:78234605-78234624 None:intergenic 35.0%
CTTCGTACTAAAACTTTGCA+GGG - chr3_3:78234790-78234809 Msa0475180:CDS 35.0%
TTCGTACTAAAACTTTGCAG+GGG - chr3_3:78234791-78234810 Msa0475180:CDS 35.0%
!! TCAATCAGTTTGCTAGGAAT+TGG + chr3_3:78234821-78234840 None:intergenic 35.0%
AGCAGCTTAGATAAATCAGA+TGG + chr3_3:78234863-78234882 None:intergenic 35.0%
TGACTTCAGAATTTCTCAAG+TGG - chr3_3:78234986-78235005 Msa0475180:CDS 35.0%
TTGGATACACACTGACATTA+TGG - chr3_3:78235027-78235046 Msa0475180:CDS 35.0%
AAAGATCACTGAAATCAAGG+AGG + chr3_3:78235180-78235199 None:intergenic 35.0%
TGGAACAGGTAGAAAAGAAA+AGG + chr3_3:78235216-78235235 None:intergenic 35.0%
ATTGGAATGTTGTCATGATG+TGG - chr3_3:78235287-78235306 Msa0475180:CDS 35.0%
! TAAAAATGGTGGAGGAAGAA+AGG + chr3_3:78235458-78235477 None:intergenic 35.0%
ATTCTCCCCAATGTCAATTT+GGG - chr3_3:78235687-78235706 Msa0475180:intron 35.0%
AGGATAAAAGGGAATTTGTG+GGG - chr3_3:78235874-78235893 Msa0475180:intron 35.0%
AACTATTACCAGTTGAGAAC+TGG + chr3_3:78236041-78236060 None:intergenic 35.0%
!! GGGAAAAATGTTTCTGGTTT+AGG - chr3_3:78236146-78236165 Msa0475180:intron 35.0%
ACATACACTCTCTTAATGAG+TGG + chr3_3:78236294-78236313 None:intergenic 35.0%
! TCATTAAGAGAGTGTATGTG+AGG - chr3_3:78236295-78236314 Msa0475180:intron 35.0%
CAGATGAAACGTAAATCTTG+AGG + chr3_3:78236479-78236498 None:intergenic 35.0%
!!! TTTTAACCTTTTTCGAACGG+AGG - chr3_3:78236575-78236594 Msa0475180:CDS 35.0%
AAACAGATGGAAGTAAAGCA+AGG + chr3_3:78236631-78236650 None:intergenic 35.0%
ATCTTTGAGTGGAGTCTAAA+AGG + chr3_3:78236720-78236739 None:intergenic 35.0%
ACCAACTTAGATCTATTGTC+TGG - chr3_3:78237102-78237121 Msa0475180:intron 35.0%
TCCAGACAATAGATCTAAGT+TGG + chr3_3:78237106-78237125 None:intergenic 35.0%
! AAGTCCATTCTAGGAAACTT+TGG - chr3_3:78237126-78237145 Msa0475180:intron 35.0%
AAGACCAAAGTTTCCTAGAA+TGG + chr3_3:78237133-78237152 None:intergenic 35.0%
TACCCCACTAATAAATACGA+CGG + chr3_3:78237311-78237330 None:intergenic 35.0%
AGACATAATCTCTTAAGGAG+TGG - chr3_3:78237375-78237394 Msa0475180:intron 35.0%
! ACTAATCAAAGAGAGTGTGT+TGG + chr3_3:78237491-78237510 None:intergenic 35.0%
! GGGTCCCATATAAATTTTGT+AGG - chr3_3:78237542-78237561 Msa0475180:intron 35.0%
TTCAACATACCCTCTTTGAT+TGG + chr3_3:78237585-78237604 None:intergenic 35.0%
TTAGTGTTCTATCATATGCC+AGG - chr3_3:78237664-78237683 Msa0475180:intron 35.0%
TAGTGTTCTATCATATGCCA+GGG - chr3_3:78237665-78237684 Msa0475180:intron 35.0%
AATAAGCATGACTATTTCCC+TGG + chr3_3:78237685-78237704 None:intergenic 35.0%
CTCAACTACTAATACCTAGT+TGG + chr3_3:78237714-78237733 None:intergenic 35.0%
!! AACACCAAAAGTTAGCTCTA+GGG + chr3_3:78237944-78237963 None:intergenic 35.0%
TCTTGCTTAGAAGTTAGAAC+TGG + chr3_3:78238068-78238087 None:intergenic 35.0%
! ACTCTAGAGGATTAGACATA+TGG + chr3_3:78238115-78238134 None:intergenic 35.0%
!! TATGTCTAATCCTCTAGAGT+AGG - chr3_3:78238115-78238134 Msa0475180:CDS 35.0%
! GAGTATTGCTCAACCTTATA+AGG + chr3_3:78238188-78238207 None:intergenic 35.0%
!!! TAGCTTTTGGGATTGAGTTT+AGG - chr3_3:78238219-78238238 Msa0475180:CDS 35.0%
! GACTTTTCTTTTGGCCAATT+TGG - chr3_3:78238457-78238476 Msa0475180:intron 35.0%
TTTGCATGACGATAATGTCT+TGG - chr3_3:78238831-78238850 Msa0475180:intron 35.0%
TTGCATGACGATAATGTCTT+GGG - chr3_3:78238832-78238851 Msa0475180:intron 35.0%
!!! TGGGAGCTATTTTTAGCATA+TGG - chr3_3:78238851-78238870 Msa0475180:intron 35.0%
!!! GGGAGCTATTTTTAGCATAT+GGG - chr3_3:78238852-78238871 Msa0475180:intron 35.0%
GGAGAGTTGAACAATTACAA+AGG - chr3_3:78238925-78238944 Msa0475180:CDS 35.0%
TCTTCTTAAGCGCTTTCTGT+CGG + chr3_3:78227708-78227727 None:intergenic 40.0%
ATTGAGCAGAGGATTTCATC+GGG + chr3_3:78227926-78227945 None:intergenic 40.0%
!!! GTTCATAAGCTGCTGTTTTC+AGG + chr3_3:78228370-78228389 None:intergenic 40.0%
CTTACAAGTGCTTATGCGTT+AGG - chr3_3:78228427-78228446 Msa0475180:intron 40.0%
! TAAAGTGCTCAAGAGCTATG+TGG + chr3_3:78228523-78228542 None:intergenic 40.0%
CATCCATAGTGGTTCTTCAT+TGG + chr3_3:78228611-78228630 None:intergenic 40.0%
TGGATGACTCTATGCCTAAA+AGG - chr3_3:78228625-78228644 Msa0475180:intron 40.0%
ATGACTCTATGCCTAAAAGG+AGG - chr3_3:78228628-78228647 Msa0475180:intron 40.0%
AATGTAAAGGCTGCTGTCTA+TGG + chr3_3:78228834-78228853 None:intergenic 40.0%
! CAGCAGCCTTTACATTTTGA+TGG - chr3_3:78228838-78228857 Msa0475180:intron 40.0%
AACAAAGAGTTGAATCCTGC+AGG + chr3_3:78228978-78228997 None:intergenic 40.0%
AAGAGGGGAAAAGTTTATGC+GGG + chr3_3:78229158-78229177 None:intergenic 40.0%
CAAGAGGGGAAAAGTTTATG+CGG + chr3_3:78229159-78229178 None:intergenic 40.0%
TGAAACAGAACCAACAAGAG+GGG + chr3_3:78229173-78229192 None:intergenic 40.0%
CTGAAACAGAACCAACAAGA+GGG + chr3_3:78229174-78229193 None:intergenic 40.0%
ACTGAAACAGAACCAACAAG+AGG + chr3_3:78229175-78229194 None:intergenic 40.0%
! CAGGATATTTTCTTTTCGCC+AGG + chr3_3:78229224-78229243 None:intergenic 40.0%
GTGATACAAAATACTCCCTC+CGG - chr3_3:78229319-78229338 Msa0475180:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG + chr3_3:78229434-78229453 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr3_3:78229433-78229452 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr3_3:78229433-78229452 Msa0475180:intron 40.0%
!! CTCTTGATCTCTGAAGCATT+TGG - chr3_3:78229653-78229672 Msa0475180:intron 40.0%
TAACCCAACTACACAAAGGA+CGG + chr3_3:78229762-78229781 None:intergenic 40.0%
! TTTTGATGAATCACACCCTC+AGG - chr3_3:78229867-78229886 Msa0475180:intron 40.0%
!! TAAATGGACTGGCGAATACA+TGG - chr3_3:78229896-78229915 Msa0475180:intron 40.0%
!! GGGAAGAGCATTATTGAAAC+GGG + chr3_3:78230109-78230128 None:intergenic 40.0%
AAACTGAAAGGAGTAGTGTG+GGG + chr3_3:78230137-78230156 None:intergenic 40.0%
CAGATAAACGACCATCCTAT+AGG - chr3_3:78230297-78230316 Msa0475180:intron 40.0%
ATAAACGACCATCCTATAGG+TGG - chr3_3:78230300-78230319 Msa0475180:intron 40.0%
ATAATTGGACCACAGAGATC+TGG - chr3_3:78230326-78230345 Msa0475180:intron 40.0%
GCATGGAATACTCTTCTTTC+TGG - chr3_3:78230383-78230402 Msa0475180:intron 40.0%
TTGGACCATGACTGTTTACA+TGG - chr3_3:78230473-78230492 Msa0475180:intron 40.0%
GACTGTTTACATGGTATCTG+AGG - chr3_3:78230482-78230501 Msa0475180:intron 40.0%
!! TTTGAGCATTGAGACTCACT+AGG - chr3_3:78230653-78230672 Msa0475180:intron 40.0%
!! TTGAGCATTGAGACTCACTA+GGG - chr3_3:78230654-78230673 Msa0475180:intron 40.0%
TAGCACTCTCAGTCTAAAAG+TGG + chr3_3:78230909-78230928 None:intergenic 40.0%
ATAATGTACCACCCGTGAAT+AGG - chr3_3:78231188-78231207 Msa0475180:intron 40.0%
ATTAACACTAGGATAGGACC+AGG - chr3_3:78231290-78231309 Msa0475180:intron 40.0%
! TAGGACCAGGTTTGCTTAAT+TGG - chr3_3:78231303-78231322 Msa0475180:intron 40.0%
!! AAAAGTGCCTTTAGGTGTGA+CGG - chr3_3:78231592-78231611 Msa0475180:intron 40.0%
GGAACATAAATTGTCTCTCC+AGG + chr3_3:78231873-78231892 None:intergenic 40.0%
GAGACAATTTATGTTCCGAG+TGG - chr3_3:78231876-78231895 Msa0475180:CDS 40.0%
CAATTTATGTTCCGAGTGGA+TGG - chr3_3:78231880-78231899 Msa0475180:CDS 40.0%
ACTCCTTTATGACGATAACC+AGG + chr3_3:78231999-78232018 None:intergenic 40.0%
! GAGACCACTACAATTTTGAG+TGG - chr3_3:78232267-78232286 Msa0475180:intron 40.0%
AGCTCCACTCAAAATTGTAG+TGG + chr3_3:78232274-78232293 None:intergenic 40.0%
!! CTACAATTTTGAGTGGAGCT+CGG - chr3_3:78232274-78232293 Msa0475180:intron 40.0%
!! TACAATTTTGAGTGGAGCTC+GGG - chr3_3:78232275-78232294 Msa0475180:intron 40.0%
GTAATTAGACCAGTGTGAAC+CGG + chr3_3:78233164-78233183 None:intergenic 40.0%
! TACATGACCGATTCATAAGG+TGG - chr3_3:78233181-78233200 Msa0475180:intron 40.0%
!!! TTTTAAAACTCGGCTCGAAC+CGG + chr3_3:78233254-78233273 None:intergenic 40.0%
! GATTTTTGTCGAAGAAGGAC+TGG - chr3_3:78233624-78233643 Msa0475180:intron 40.0%
!! GAAGCATCGCTTTATGGTTT+AGG - chr3_3:78233646-78233665 Msa0475180:intron 40.0%
AGGAATATGTTTCCTGAGAG+GGG + chr3_3:78233784-78233803 None:intergenic 40.0%
CTAGGAATATGTTTCCTGAG+AGG + chr3_3:78233786-78233805 None:intergenic 40.0%
TTCAAGATAAACAACCCCAC+TGG + chr3_3:78233817-78233836 None:intergenic 40.0%
GTATAGGAATACTGGGATTC+CGG - chr3_3:78233968-78233987 Msa0475180:intron 40.0%
TAGCCGGTAACTCAAGTATA+TGG - chr3_3:78234009-78234028 Msa0475180:intron 40.0%
TGGCCATATACTTGAGTTAC+CGG + chr3_3:78234015-78234034 None:intergenic 40.0%
! ACTTGTAAGTGTTGTCCTTG+TGG - chr3_3:78234075-78234094 Msa0475180:intron 40.0%
GTGGGAAGATACAACAAACT+TGG - chr3_3:78234216-78234235 Msa0475180:intron 40.0%
GATGTGGTAAAAGATGAAGG+TGG + chr3_3:78234267-78234286 None:intergenic 40.0%
GTGGATGTGGTAAAAGATGA+AGG + chr3_3:78234270-78234289 None:intergenic 40.0%
! ACGTGAATTAAACTGGTCTG+AGG - chr3_3:78234321-78234340 Msa0475180:CDS 40.0%
! TTAAACTGGTCTGAGGTGAA+AGG - chr3_3:78234328-78234347 Msa0475180:CDS 40.0%
TCAAACAATGCAGCAGAATG+GGG - chr3_3:78234376-78234395 Msa0475180:CDS 40.0%
GGATAGTTCAAGAATGAGAG+AGG - chr3_3:78234501-78234520 Msa0475180:intron 40.0%
!!! TTCCATTTTTGGGTTTGCCT+TGG - chr3_3:78234713-78234732 Msa0475180:CDS 40.0%
!! GTTTTAGTACGAAGCATCAG+AGG + chr3_3:78234784-78234803 None:intergenic 40.0%
GCTTCGTACTAAAACTTTGC+AGG - chr3_3:78234789-78234808 Msa0475180:CDS 40.0%
CTGAAATCAAGGAGGTAACT+AGG + chr3_3:78235172-78235191 None:intergenic 40.0%
TGTTATTGACCCCTACATGT+AGG - chr3_3:78235406-78235425 Msa0475180:intron 40.0%
GTTATTGACCCCTACATGTA+GGG - chr3_3:78235407-78235426 Msa0475180:intron 40.0%
AGAAAGGAAGTGACGATCAT+AGG + chr3_3:78235442-78235461 None:intergenic 40.0%
TGCAGTCAATATGCATCTCA+AGG + chr3_3:78235579-78235598 None:intergenic 40.0%
GATTCTCCCCAATGTCAATT+TGG - chr3_3:78235686-78235705 Msa0475180:intron 40.0%
TTTATGCTCCAGTTCTCAAC+TGG - chr3_3:78236030-78236049 Msa0475180:intron 40.0%
! GGTGTTGAGATTGGACATAT+TGG - chr3_3:78236422-78236441 Msa0475180:intron 40.0%
AGATTGGACATATTGGACTG+TGG - chr3_3:78236429-78236448 Msa0475180:intron 40.0%
AAAGCAAGGACTAAAAGCTC+AGG + chr3_3:78236617-78236636 None:intergenic 40.0%
!! AAAAGGTGCTCTAGACCAAA+TGG + chr3_3:78236703-78236722 None:intergenic 40.0%
ATCAAAGTACGAGTCAACAG+AGG - chr3_3:78236927-78236946 Msa0475180:CDS 40.0%
TCAAAGTACGAGTCAACAGA+GGG - chr3_3:78236928-78236947 Msa0475180:CDS 40.0%
TTGTCTGGAAAGTCCATTCT+AGG - chr3_3:78237117-78237136 Msa0475180:intron 40.0%
! TTATTAGTGGGGTACCTTTC+AGG - chr3_3:78237317-78237336 Msa0475180:intron 40.0%
! TATTAGTGGGGTACCTTTCA+GGG - chr3_3:78237318-78237337 Msa0475180:intron 40.0%
CTCATATAACTGTCCCTGAA+AGG + chr3_3:78237334-78237353 None:intergenic 40.0%
CTTTCAGGGACAGTTATATG+AGG - chr3_3:78237332-78237351 Msa0475180:intron 40.0%
TATATGGGACCCACATGATT+TGG + chr3_3:78237534-78237553 None:intergenic 40.0%
TGAGAAGATTGATGCACACT+AGG - chr3_3:78237730-78237749 Msa0475180:intron 40.0%
AAGATTGCTCAAGTGCTACA+TGG + chr3_3:78237918-78237937 None:intergenic 40.0%
!! ACACCAAAAGTTAGCTCTAG+GGG + chr3_3:78237943-78237962 None:intergenic 40.0%
! CAACACCAAAAGTTAGCTCT+AGG + chr3_3:78237945-78237964 None:intergenic 40.0%
!! CTAGAGCTAACTTTTGGTGT+TGG - chr3_3:78237943-78237962 Msa0475180:intron 40.0%
ACCAGAGTACACACCTTATA+AGG - chr3_3:78238172-78238191 Msa0475180:CDS 40.0%
ACCTTATAAGGTGTGTACTC+TGG + chr3_3:78238176-78238195 None:intergenic 40.0%
AACTGATCTTTGTATGGTCG+AGG - chr3_3:78238428-78238447 Msa0475180:intron 40.0%
AACTGAGATCATCAGAGTCA+TGG - chr3_3:78238878-78238897 Msa0475180:intron 40.0%
ACTGAGATCATCAGAGTCAT+GGG - chr3_3:78238879-78238898 Msa0475180:intron 40.0%
AAGAAGTTGAGATGACAGTG+TGG - chr3_3:78238902-78238921 Msa0475180:intron 40.0%
AGAAGTTGAGATGACAGTGT+GGG - chr3_3:78238903-78238922 Msa0475180:intron 40.0%
! CACTTTTGCCTATGTGATGG+AGG - chr3_3:78227653-78227672 Msa0475180:three_prime_UTR 45.0%
!! TTTTGCCTATGTGATGGAGG+TGG - chr3_3:78227656-78227675 Msa0475180:three_prime_UTR 45.0%
AGGCATAGAGTCATCCATAG+TGG + chr3_3:78228622-78228641 None:intergenic 45.0%
! AACCAGATGCTCCTCCTTTT+AGG + chr3_3:78228642-78228661 None:intergenic 45.0%
TGGCACTCTTTGTACTTCTC+TGG + chr3_3:78228814-78228833 None:intergenic 45.0%
AAGAGTTGAATCCTGCAGGA+AGG + chr3_3:78228974-78228993 None:intergenic 45.0%
TATCCAGTGTGGTATGACAC+CGG + chr3_3:78229019-78229038 None:intergenic 45.0%
TTATACAGAGGGTGGCAATG+TGG - chr3_3:78229043-78229062 Msa0475180:intron 45.0%
ACAACCGTCCTTTGTGTAGT+TGG - chr3_3:78229755-78229774 Msa0475180:intron 45.0%
CAACCGTCCTTTGTGTAGTT+GGG - chr3_3:78229756-78229775 Msa0475180:intron 45.0%
GTCCATTTAGCATGACCTGA+GGG + chr3_3:78229885-78229904 None:intergenic 45.0%
AGTCCATTTAGCATGACCTG+AGG + chr3_3:78229886-78229905 None:intergenic 45.0%
TCAGGTCATGCTAAATGGAC+TGG - chr3_3:78229885-78229904 Msa0475180:intron 45.0%
ATCAGTTGTCCATTTCTGCC+TGG + chr3_3:78229926-78229945 None:intergenic 45.0%
ACATGCCCCTAGCTTATTGA+AGG - chr3_3:78230223-78230242 Msa0475180:intron 45.0%
ATCCAGCTCTTACAAGTGCA+TGG - chr3_3:78230366-78230385 Msa0475180:intron 45.0%
TTCCATGCACTTGTAAGAGC+TGG + chr3_3:78230371-78230390 None:intergenic 45.0%
! CTCTTCTTTCTGGCCGTAAA+AGG - chr3_3:78230393-78230412 Msa0475180:intron 45.0%
TTAATGAAGGGGATAGGGAG+AGG - chr3_3:78230621-78230640 Msa0475180:intron 45.0%
AGACTCACTAGGGATCTAAC+TGG - chr3_3:78230664-78230683 Msa0475180:intron 45.0%
GACTCACTAGGGATCTAACT+GGG - chr3_3:78230665-78230684 Msa0475180:intron 45.0%
!!! TTTTTTCCCCATTGGGAAGC+TGG - chr3_3:78230697-78230716 Msa0475180:intron 45.0%
! TTTTTCCCCATTGGGAAGCT+GGG - chr3_3:78230698-78230717 Msa0475180:intron 45.0%
CGTTTAGGCTGCAAGTCAAT+TGG - chr3_3:78230723-78230742 Msa0475180:intron 45.0%
CGTCTTAGATGGGAGTAGAT+AGG - chr3_3:78231041-78231060 Msa0475180:intron 45.0%
AGATGGGAGTAGATAGGAGT+TGG - chr3_3:78231047-78231066 Msa0475180:intron 45.0%
AAGAGTGAAGGATAACCTCC+CGG + chr3_3:78231214-78231233 None:intergenic 45.0%
! GGTGCATGGATTTTCTGTGT+TGG - chr3_3:78231487-78231506 Msa0475180:intron 45.0%
!!! ACACCTAAAGGCACTTTTCC+AGG + chr3_3:78231590-78231609 None:intergenic 45.0%
! TCTAGAACCTGCAGTGATGA+TGG + chr3_3:78231659-78231678 None:intergenic 45.0%
TTGTCTTCGTCAGCAAGAAG+AGG + chr3_3:78231828-78231847 None:intergenic 45.0%
TTTATGTTCCGAGTGGATGG+TGG - chr3_3:78231883-78231902 Msa0475180:CDS 45.0%
GTATGTTTGGATATGGCACC+TGG - chr3_3:78231978-78231997 Msa0475180:intron 45.0%
GCACCTGGTTATCGTCATAA+AGG - chr3_3:78231993-78232012 Msa0475180:intron 45.0%
GTCAACGGGAACTAAGAGAA+TGG - chr3_3:78232309-78232328 Msa0475180:intron 45.0%
GAGAATGGTTGTCCAAGCTT+TGG - chr3_3:78232324-78232343 Msa0475180:intron 45.0%
GCATGCATTGCACTAAATGC+CGG - chr3_3:78232480-78232499 Msa0475180:CDS 45.0%
!! ACCTTTGTAGGAAGGCACTT+TGG - chr3_3:78232986-78233005 Msa0475180:CDS 45.0%
! ACCAAAGTGCCTTCCTACAA+AGG + chr3_3:78232990-78233009 None:intergenic 45.0%
GAACCATGTGCACCAAACTT+CGG + chr3_3:78233015-78233034 None:intergenic 45.0%
AGTCGAGCCACCTTATGAAT+CGG + chr3_3:78233191-78233210 None:intergenic 45.0%
ATTCATAAGGTGGCTCGACT+CGG - chr3_3:78233191-78233210 Msa0475180:intron 45.0%
! CGTTGGTGCTTACCATAACT+TGG - chr3_3:78233422-78233441 Msa0475180:intron 45.0%
!! TCTGACATGAGACCGGTTTT+TGG - chr3_3:78233499-78233518 Msa0475180:intron 45.0%
GCTTTATGGTTTAGGCACAG+AGG - chr3_3:78233654-78233673 Msa0475180:intron 45.0%
ATTCCTAGTGTTATGGCCAG+TGG - chr3_3:78233798-78233817 Msa0475180:intron 45.0%
TTCCTAGTGTTATGGCCAGT+GGG - chr3_3:78233799-78233818 Msa0475180:intron 45.0%
CATCACAGAGAAATGCAACG+TGG - chr3_3:78233905-78233924 Msa0475180:intron 45.0%
ACAGAGAAATGCAACGTGGA+TGG - chr3_3:78233909-78233928 Msa0475180:intron 45.0%
! GACGGATCAGTTAGTTTAGC+CGG - chr3_3:78233993-78234012 Msa0475180:intron 45.0%
CAGAAGAGACAGACTATCGT+GGG - chr3_3:78234198-78234217 Msa0475180:intron 45.0%
CACCAAGGCAAACCCAAAAA+TGG + chr3_3:78234718-78234737 None:intergenic 45.0%
TCAGTGTGTATCCAAGAGCA+GGG + chr3_3:78235022-78235041 None:intergenic 45.0%
GAGGTAGAGCAAATCGATGA+TGG + chr3_3:78235073-78235092 None:intergenic 45.0%
ATCTTCTGTATTCCCACTGG+AGG + chr3_3:78235092-78235111 None:intergenic 45.0%
AGCATCTTCTGTATTCCCAC+TGG + chr3_3:78235095-78235114 None:intergenic 45.0%
AATACAGAAGATGCTGCCGA+GGG - chr3_3:78235100-78235119 Msa0475180:intron 45.0%
CAATAAACCATTGTCCCCCT+CGG + chr3_3:78235119-78235138 None:intergenic 45.0%
GGTTTATTGAGTGACCACGT+TGG - chr3_3:78235130-78235149 Msa0475180:intron 45.0%
AAGACGGGTATGACTGAAGT+TGG + chr3_3:78235250-78235269 None:intergenic 45.0%
AGTGTATGTGAGAACCCACT+TGG - chr3_3:78235615-78235634 Msa0475180:intron 45.0%
GTGTATGTGAGAACCCACTT+GGG - chr3_3:78235616-78235635 Msa0475180:intron 45.0%
AGCGCACCCAAATTGACATT+GGG + chr3_3:78235696-78235715 None:intergenic 45.0%
TAGCGCACCCAAATTGACAT+TGG + chr3_3:78235697-78235716 None:intergenic 45.0%
AAAAGGGAATTTGTGGGGAC+AGG - chr3_3:78235879-78235898 Msa0475180:intron 45.0%
GTGGGGACAGGTGTTAAAAT+CGG - chr3_3:78235891-78235910 Msa0475180:intron 45.0%
! CACGCAAAAGCACAGTCTTA+AGG + chr3_3:78235948-78235967 None:intergenic 45.0%
ATTGGTGAAACGGGAACTAG+TGG - chr3_3:78236394-78236413 Msa0475180:intron 45.0%
TTGGTGAAACGGGAACTAGT+GGG - chr3_3:78236395-78236414 Msa0475180:intron 45.0%
TATTGGACTGTGGAGAGTTG+AGG - chr3_3:78236439-78236458 Msa0475180:intron 45.0%
ATCAGTCCTCCGTTCGAAAA+AGG + chr3_3:78236584-78236603 None:intergenic 45.0%
! ACAGAGGGTGGTCTAAAGTT+TGG - chr3_3:78236943-78236962 Msa0475180:CDS 45.0%
! TGCAGCCTTATCAGGGTTAT+AGG + chr3_3:78237075-78237094 None:intergenic 45.0%
! TTTGGTCTGCAGCCTTATCA+GGG + chr3_3:78237082-78237101 None:intergenic 45.0%
!! TTTTGGTCTGCAGCCTTATC+AGG + chr3_3:78237083-78237102 None:intergenic 45.0%
CCCACTAATAAATACGACGG+CGG + chr3_3:78237308-78237327 None:intergenic 45.0%
CCGCCGTCGTATTTATTAGT+GGG - chr3_3:78237305-78237324 Msa0475180:intron 45.0%
CGCCGTCGTATTTATTAGTG+GGG - chr3_3:78237306-78237325 Msa0475180:intron 45.0%
TTAAGGAGTGGCAGAACACT+GGG - chr3_3:78237387-78237406 Msa0475180:intron 45.0%
ATGAGTCCCACCAAATCATG+TGG - chr3_3:78237521-78237540 Msa0475180:intron 45.0%
TGAGTCCCACCAAATCATGT+GGG - chr3_3:78237522-78237541 Msa0475180:intron 45.0%
TGCTTATTGCTCTCCCAACT+AGG - chr3_3:78237697-78237716 Msa0475180:intron 45.0%
ATCCGCATCTGCTAGAGATA+TGG - chr3_3:78237882-78237901 Msa0475180:CDS 45.0%
GACCATATCTCTAGCAGATG+CGG + chr3_3:78237887-78237906 None:intergenic 45.0%
! TCACCCCTAGAGCTAACTTT+TGG - chr3_3:78237937-78237956 Msa0475180:intron 45.0%
AGAGCGGAGACAAATATGGT+TGG + chr3_3:78238030-78238049 None:intergenic 45.0%
ACCATATTTGTCTCCGCTCT+TGG - chr3_3:78238030-78238049 Msa0475180:intron 45.0%
TGCGTGTTCAAATCAGCTAG+AGG - chr3_3:78238145-78238164 Msa0475180:CDS 45.0%
GAAGTTGAGATGACAGTGTG+GGG - chr3_3:78238904-78238923 Msa0475180:intron 45.0%
!!! TATAAGAAAATTTTATAAAT+AGG - chr3_3:78235854-78235873 Msa0475180:intron 5.0%
!! TATATATATATGAAATTATT+TGG - chr3_3:78238379-78238398 Msa0475180:intron 5.0%
TGGAGGTGGCGTAGGAATAA+CGG - chr3_3:78227670-78227689 Msa0475180:three_prime_UTR 50.0%
GATCGCAGAATAGACGCTCT+TGG - chr3_3:78227884-78227903 Msa0475180:three_prime_UTR 50.0%
GACGTTCGAGAATTGAGCAG+AGG + chr3_3:78227937-78227956 None:intergenic 50.0%
AGTGCTCAAGAGCTATGTGG+CGG + chr3_3:78228520-78228539 None:intergenic 50.0%
!! TGCCTAAAAGGAGGAGCATC+TGG - chr3_3:78228637-78228656 Msa0475180:intron 50.0%
ACTGATGCTAACCTTCCTGC+AGG - chr3_3:78228960-78228979 Msa0475180:intron 50.0%
!! ATACCGGTGTCATACCACAC+TGG - chr3_3:78229013-78229032 Msa0475180:intron 50.0%
! AACACACTGGCCTCGTAAAC+TGG + chr3_3:78229502-78229521 None:intergenic 50.0%
CACCCTCAGGTCATGCTAAA+TGG - chr3_3:78229880-78229899 Msa0475180:intron 50.0%
AGCTGGATCAACATGCCAAG+AGG + chr3_3:78230354-78230373 None:intergenic 50.0%
TCAGGCTTCTGCGTCTTAGA+TGG - chr3_3:78231030-78231049 Msa0475180:intron 50.0%
CAGGCTTCTGCGTCTTAGAT+GGG - chr3_3:78231031-78231050 Msa0475180:intron 50.0%
GCAGTAGTAGTACGGAGTAG+TGG - chr3_3:78231148-78231167 Msa0475180:intron 50.0%
ATAACCTCCCGGCCTATTCA+CGG + chr3_3:78231203-78231222 None:intergenic 50.0%
AGGTGGGCATTATATCCTCC+TGG - chr3_3:78231569-78231588 Msa0475180:intron 50.0%
!!! CCTAAAGGCACTTTTCCAGG+AGG + chr3_3:78231587-78231606 None:intergenic 50.0%
!! CCTCCTGGAAAAGTGCCTTT+AGG - chr3_3:78231584-78231603 Msa0475180:intron 50.0%
ACATGCACCGTCACACCTAA+AGG + chr3_3:78231602-78231621 None:intergenic 50.0%
TGAGACTCCATCATCACTGC+AGG - chr3_3:78231649-78231668 Msa0475180:intron 50.0%
ATACAGTGCCACCATCCACT+CGG + chr3_3:78231894-78231913 None:intergenic 50.0%
TCATAAAGGAGTCTGCCGTG+TGG - chr3_3:78232007-78232026 Msa0475180:intron 50.0%
CATAAAGGAGTCTGCCGTGT+GGG - chr3_3:78232008-78232027 Msa0475180:intron 50.0%
CAAGAGCAAGCAAACCCACA+CGG + chr3_3:78232025-78232044 None:intergenic 50.0%
TTAGTGCAATGCATGCTCCC+TGG + chr3_3:78232476-78232495 None:intergenic 50.0%
TTGCACTAAATGCCGGCAAG+TGG - chr3_3:78232487-78232506 Msa0475180:CDS 50.0%
CAGGCATTCTAACCACTTGC+CGG + chr3_3:78232502-78232521 None:intergenic 50.0%
GGAAGCCTTTCGTCATCTGT+GGG + chr3_3:78232558-78232577 None:intergenic 50.0%
AGGAAGCCTTTCGTCATCTG+TGG + chr3_3:78232559-78232578 None:intergenic 50.0%
GATGACGAAAGGCTTCCTGT+TGG - chr3_3:78232561-78232580 Msa0475180:CDS 50.0%
! CGAAAGGCTTCCTGTTGGTT+CGG - chr3_3:78232566-78232585 Msa0475180:CDS 50.0%
!! GAAAGGCTTCCTGTTGGTTC+GGG - chr3_3:78232567-78232586 Msa0475180:CDS 50.0%
CAGTAAGGGAGGACATGTTG+AGG + chr3_3:78232850-78232869 None:intergenic 50.0%
GCACTTTGGTCACCGAAGTT+TGG - chr3_3:78233000-78233019 Msa0475180:CDS 50.0%
!! TCACCGAAGTTTGGTGCACA+TGG - chr3_3:78233009-78233028 Msa0475180:CDS 50.0%
GCACATGGTTCGATCCCTAT+AGG - chr3_3:78233024-78233043 Msa0475180:CDS 50.0%
!!! GGTCGGTTTTCGAGTCAATC+CGG + chr3_3:78233105-78233124 None:intergenic 50.0%
TCGAAAACCGACCGAGTTAC+CGG - chr3_3:78233112-78233131 Msa0475180:CDS 50.0%
GTCATAACCGGTAACTCGGT+CGG + chr3_3:78233122-78233141 None:intergenic 50.0%
! ACCGAGTTACCGGTTATGAC+CGG - chr3_3:78233122-78233141 Msa0475180:CDS 50.0%
ACCGGTCATAACCGGTAACT+CGG + chr3_3:78233126-78233145 None:intergenic 50.0%
CGCTGAAAACCGGTCATAAC+CGG + chr3_3:78233134-78233153 None:intergenic 50.0%
!! TCGGTCTAATCACCGGTTCA+CGG - chr3_3:78233210-78233229 Msa0475180:intron 50.0%
!! TCTAATCACCGGTTCACGGT+CGG - chr3_3:78233214-78233233 Msa0475180:intron 50.0%
!! GGACTGGAAGCATCGCTTTA+TGG - chr3_3:78233640-78233659 Msa0475180:intron 50.0%
ATGTTTCCTGAGAGGGGAGT+TGG + chr3_3:78233778-78233797 None:intergenic 50.0%
TCCTAGTGTTATGGCCAGTG+GGG - chr3_3:78233800-78233819 Msa0475180:intron 50.0%
AACGTGGATGGTTTCCCGTT+TGG - chr3_3:78233921-78233940 Msa0475180:intron 50.0%
ACGTGGATGGTTTCCCGTTT+GGG - chr3_3:78233922-78233941 Msa0475180:intron 50.0%
! ATGGTTTCCCGTTTGGGGTA+TGG - chr3_3:78233928-78233947 Msa0475180:intron 50.0%
! TGGTTTCCCGTTTGGGGTAT+GGG - chr3_3:78233929-78233948 Msa0475180:intron 50.0%
TAGGAATACTGGGATTCCGG+CGG - chr3_3:78233971-78233990 Msa0475180:intron 50.0%
AAACTAACTGATCCGTCCGC+CGG + chr3_3:78233990-78234009 None:intergenic 50.0%
GCAGAAGAGACAGACTATCG+TGG - chr3_3:78234197-78234216 Msa0475180:intron 50.0%
AACAAACTTGGCCTCCTTCC+TGG - chr3_3:78234228-78234247 Msa0475180:intron 50.0%
ACAAACTTGGCCTCCTTCCT+GGG - chr3_3:78234229-78234248 Msa0475180:intron 50.0%
TCTCAAGCCGTTTGACCAAG+TGG - chr3_3:78234437-78234456 Msa0475180:intron 50.0%
!! AGCATGCAACAGAAGCACCA+AGG + chr3_3:78234733-78234752 None:intergenic 50.0%
GCACTTCTAAACCCTGCTCT+TGG - chr3_3:78235008-78235027 Msa0475180:CDS 50.0%
GTCAGTGTGTATCCAAGAGC+AGG + chr3_3:78235023-78235042 None:intergenic 50.0%
! TCGATTTGCTCTACCTCCAG+TGG - chr3_3:78235076-78235095 Msa0475180:CDS 50.0%
! CGATTTGCTCTACCTCCAGT+GGG - chr3_3:78235077-78235096 Msa0475180:CDS 50.0%
GAATACAGAAGATGCTGCCG+AGG - chr3_3:78235099-78235118 Msa0475180:intron 50.0%
ATACAGAAGATGCTGCCGAG+GGG - chr3_3:78235101-78235120 Msa0475180:intron 50.0%
ACCACGTTGGAGTGAAATCC+TGG - chr3_3:78235143-78235162 Msa0475180:intron 50.0%
ACCAGGATTTCACTCCAACG+TGG + chr3_3:78235147-78235166 None:intergenic 50.0%
AAGGAGGTAACTAGGACACC+AGG + chr3_3:78235164-78235183 None:intergenic 50.0%
ATGTGAGAACCCACTTGGGT+TGG - chr3_3:78235620-78235639 Msa0475180:intron 50.0%
TGTGAGAACCCACTTGGGTT+GGG - chr3_3:78235621-78235640 Msa0475180:intron 50.0%
!! GTGGTATTGGCTTGGGATCT+GGG - chr3_3:78235647-78235666 Msa0475180:intron 50.0%
GCGCACCCAAATTGACATTG+GGG + chr3_3:78235695-78235714 None:intergenic 50.0%
TGGTGAAACGGGAACTAGTG+GGG - chr3_3:78236396-78236415 Msa0475180:intron 50.0%
AAACGGGAACTAGTGGGGAA+TGG - chr3_3:78236401-78236420 Msa0475180:intron 50.0%
! GTGGGGAATGGTGTTGAGAT+TGG - chr3_3:78236413-78236432 Msa0475180:intron 50.0%
TGTGGAGAGTTGAGGAACTC+TGG - chr3_3:78236447-78236466 Msa0475180:intron 50.0%
GCAAGGACTAAAAGCTCAGG+AGG + chr3_3:78236614-78236633 None:intergenic 50.0%
AAGTACGAGTCAACAGAGGG+TGG - chr3_3:78236931-78236950 Msa0475180:CDS 50.0%
GCCGCCGTCGTATTTATTAG+TGG - chr3_3:78237304-78237323 Msa0475180:intron 50.0%
CTTAAGGAGTGGCAGAACAC+TGG - chr3_3:78237386-78237405 Msa0475180:intron 50.0%
!! TGGGACCCACATGATTTGGT+GGG + chr3_3:78237530-78237549 None:intergenic 50.0%
! ATGGGACCCACATGATTTGG+TGG + chr3_3:78237531-78237550 None:intergenic 50.0%
GCCAAGAGCGGAGACAAATA+TGG + chr3_3:78238034-78238053 None:intergenic 50.0%
! GACATCTAGAGTGCCAAGAG+CGG + chr3_3:78238046-78238065 None:intergenic 50.0%
GCACATACTGCCTACTCTAG+AGG + chr3_3:78238128-78238147 None:intergenic 50.0%
CGTGAAAGCCTGAAAGTCAG+GGG + chr3_3:78238743-78238762 None:intergenic 50.0%
CCGTGAAAGCCTGAAAGTCA+GGG + chr3_3:78238744-78238763 None:intergenic 50.0%
CCCTGACTTTCAGGCTTTCA+CGG - chr3_3:78238741-78238760 Msa0475180:intron 50.0%
TCCGTGAAAGCCTGAAAGTC+AGG + chr3_3:78238745-78238764 None:intergenic 50.0%
CTACGCCACCTCCATCACAT+AGG + chr3_3:78227664-78227683 None:intergenic 55.0%
! CTATGTGATGGAGGTGGCGT+AGG - chr3_3:78227662-78227681 Msa0475180:three_prime_UTR 55.0%
GTTGTCCATTTCTGCCTGGC+AGG + chr3_3:78229922-78229941 None:intergenic 55.0%
AGGAGTAGTGTGGGGAGACA+GGG + chr3_3:78230129-78230148 None:intergenic 55.0%
AAGGAGTAGTGTGGGGAGAC+AGG + chr3_3:78230130-78230149 None:intergenic 55.0%
GGGCATGTTCGCCAAACTGT+TGG + chr3_3:78230211-78230230 None:intergenic 55.0%
!! CAAGAGGCACCAGATCTCTG+TGG + chr3_3:78230338-78230357 None:intergenic 55.0%
CACAGAGATCTGGTGCCTCT+TGG - chr3_3:78230336-78230355 Msa0475180:intron 55.0%
ATGAAGGGGATAGGGAGAGG+TGG - chr3_3:78230624-78230643 Msa0475180:intron 55.0%
AACGCACCCAGCTTCCCAAT+GGG + chr3_3:78230707-78230726 None:intergenic 55.0%
AAACGCACCCAGCTTCCCAA+TGG + chr3_3:78230708-78230727 None:intergenic 55.0%
TTGGGAAGCTGGGTGCGTTT+AGG - chr3_3:78230708-78230727 Msa0475180:intron 55.0%
TGTACCACCCGTGAATAGGC+CGG - chr3_3:78231192-78231211 Msa0475180:intron 55.0%
TAACCTCCCGGCCTATTCAC+GGG + chr3_3:78231202-78231221 None:intergenic 55.0%
!! CGGGCAACAGCATTGGTCAA+CGG - chr3_3:78232294-78232313 Msa0475180:intron 55.0%
!! GGGCAACAGCATTGGTCAAC+GGG - chr3_3:78232295-78232314 Msa0475180:intron 55.0%
CTTTCGTCATCTGTGGGAGG+GGG + chr3_3:78232552-78232571 None:intergenic 55.0%
CCTTTCGTCATCTGTGGGAG+GGG + chr3_3:78232553-78232572 None:intergenic 55.0%
GCCTTTCGTCATCTGTGGGA+GGG + chr3_3:78232554-78232573 None:intergenic 55.0%
AGCCTTTCGTCATCTGTGGG+AGG + chr3_3:78232555-78232574 None:intergenic 55.0%
GGATTGCTACCCGAACCAAC+AGG + chr3_3:78232579-78232598 None:intergenic 55.0%
CGGTGAGACTCGCTGAAAAC+CGG + chr3_3:78233144-78233163 None:intergenic 55.0%
! CGGTTTTCAGCGAGTCTCAC+CGG - chr3_3:78233142-78233161 Msa0475180:CDS 55.0%
!! GCTCGACTCGGTCTAATCAC+CGG - chr3_3:78233203-78233222 Msa0475180:intron 55.0%
TTGAAGCCAACTCCCCTCTC+AGG - chr3_3:78233769-78233788 Msa0475180:intron 55.0%
ACCCCACTGGCCATAACACT+AGG + chr3_3:78233804-78233823 None:intergenic 55.0%
CGTGGATGGTTTCCCGTTTG+GGG - chr3_3:78233923-78233942 Msa0475180:intron 55.0%
! GGTTTCCCGTTTGGGGTATG+GGG - chr3_3:78233930-78233949 Msa0475180:intron 55.0%
TGCTTGCCCCATACCCCAAA+CGG + chr3_3:78233939-78233958 None:intergenic 55.0%
AATACTGGGATTCCGGCGGA+CGG - chr3_3:78233975-78233994 Msa0475180:intron 55.0%
GTTGTGTGGCCTGCAGAAGT+AGG + chr3_3:78234142-78234161 None:intergenic 55.0%
CAAACTTGGCCTCCTTCCTG+GGG - chr3_3:78234230-78234249 Msa0475180:intron 55.0%
AAACTTGGCCTCCTTCCTGG+GGG - chr3_3:78234231-78234250 Msa0475180:intron 55.0%
TACAGAAGATGCTGCCGAGG+GGG - chr3_3:78235102-78235121 Msa0475180:intron 55.0%
!! TTGGGTTGGGCTGGTGGTAT+TGG - chr3_3:78235634-78235653 Msa0475180:intron 55.0%
!! TTGGGCTGGTGGTATTGGCT+TGG - chr3_3:78235639-78235658 Msa0475180:intron 55.0%
!! TGGGCTGGTGGTATTGGCTT+GGG - chr3_3:78235640-78235659 Msa0475180:intron 55.0%
!! GGTGGTATTGGCTTGGGATC+TGG - chr3_3:78235646-78235665 Msa0475180:intron 55.0%
CATTGGGGAGAATCGAGCCT+GGG + chr3_3:78235680-78235699 None:intergenic 55.0%
ACATTGGGGAGAATCGAGCC+TGG + chr3_3:78235681-78235700 None:intergenic 55.0%
! GCCTTGTTCCCCTGACTTTC+AGG - chr3_3:78238732-78238751 Msa0475180:intron 55.0%
GCCTGAAAGTCAGGGGAACA+AGG + chr3_3:78238736-78238755 None:intergenic 55.0%
TCGATCGTGCATTCAGGCTC+CGG + chr3_3:78238984-78239003 None:intergenic 55.0%
TTGGGCTCGATCGTGCATTC+AGG + chr3_3:78238990-78239009 None:intergenic 55.0%
TGGCGAATACATGGCCTGCC+AGG - chr3_3:78229905-78229924 Msa0475180:intron 60.0%
CATGGCCTGCCAGGCAGAAA+TGG - chr3_3:78229914-78229933 Msa0475180:intron 60.0%
ACGCACCCAGCTTCCCAATG+GGG + chr3_3:78230706-78230725 None:intergenic 60.0%
GTACCACCCGTGAATAGGCC+GGG - chr3_3:78231193-78231212 Msa0475180:intron 60.0%
TGGAGCTCGGGCAACAGCAT+TGG - chr3_3:78232287-78232306 Msa0475180:intron 60.0%
GGGAGGGGGCAAGTTGTTGA+AGG + chr3_3:78232538-78232557 None:intergenic 60.0%
CCCCTCCCACAGATGACGAA+AGG - chr3_3:78232550-78232569 Msa0475180:CDS 60.0%
!! CGAGTCTCACCGGTTCACAC+TGG - chr3_3:78233152-78233171 Msa0475180:intron 60.0%
! AAAACTCGGCTCGAACCGGC+CGG + chr3_3:78233250-78233269 None:intergenic 60.0%
GCTTGCCCCATACCCCAAAC+GGG + chr3_3:78233938-78233957 None:intergenic 60.0%
CATTTGCTCCCCCAGGAAGG+AGG + chr3_3:78234242-78234261 None:intergenic 60.0%
!! AGAACCCACTTGGGTTGGGC+TGG - chr3_3:78235625-78235644 Msa0475180:intron 60.0%
ACCACCAGCCCAACCCAAGT+GGG + chr3_3:78235632-78235651 None:intergenic 60.0%
TACCACCAGCCCAACCCAAG+TGG + chr3_3:78235633-78235652 None:intergenic 60.0%
GCGACGCGAGCAGCATCTTG+AGG + chr3_3:78227965-78227984 None:intergenic 65.0%
CTCGCGTCGCTTGCGTTAGC+AGG - chr3_3:78227975-78227994 Msa0475180:CDS 65.0%
!! TCACCGGTTCACGGTCGGAC+CGG - chr3_3:78233219-78233238 Msa0475180:intron 65.0%
GAACCGGTCCGACCGTGAAC+CGG + chr3_3:78233225-78233244 None:intergenic 65.0%
! CACGGTCGGACCGGTTCAAC+CGG - chr3_3:78233228-78233247 Msa0475180:intron 65.0%
CTCGAACCGGCCGGTTGAAC+CGG + chr3_3:78233241-78233260 None:intergenic 65.0%
GCGCATTTGCTCCCCCAGGA+AGG + chr3_3:78234245-78234264 None:intergenic 65.0%
GATGCTGCCGAGGGGGACAA+TGG - chr3_3:78235109-78235128 Msa0475180:intron 65.0%
!! ACCCACTTGGGTTGGGCTGG+TGG - chr3_3:78235628-78235647 Msa0475180:intron 65.0%
! GGGATCTGGGAGTGTGTCCC+AGG - chr3_3:78235660-78235679 Msa0475180:intron 65.0%
CCTCCCGGCCTATTCACGGG+TGG + chr3_3:78231199-78231218 None:intergenic 70.0%
CCACCCGTGAATAGGCCGGG+AGG - chr3_3:78231196-78231215 Msa0475180:intron 70.0%
! GTCGGACCGGTTCAACCGGC+CGG - chr3_3:78233232-78233251 Msa0475180:intron 70.0%
GGTGGCGCATTTGCTCCCCC+AGG + chr3_3:78234249-78234268 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 78227649 78239268 78227649 ID=Msa0475180;Name=Msa0475180
chr3_3 mRNA 78227649 78239268 78227649 ID=Msa0475180-mRNA-1;Parent=Msa0475180;Name=Msa0475180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=199|1|0.93|1|1|1|15|311|1010
chr3_3 exon 78227649 78228098 78227649 ID=Msa0475180-mRNA-1:exon:21065;Parent=Msa0475180-mRNA-1
chr3_3 exon 78229931 78230099 78229931 ID=Msa0475180-mRNA-1:exon:21064;Parent=Msa0475180-mRNA-1
chr3_3 exon 78231712 78231922 78231712 ID=Msa0475180-mRNA-1:exon:21063;Parent=Msa0475180-mRNA-1
chr3_3 exon 78232022 78232106 78232022 ID=Msa0475180-mRNA-1:exon:21062;Parent=Msa0475180-mRNA-1
chr3_3 exon 78232459 78232716 78232459 ID=Msa0475180-mRNA-1:exon:21061;Parent=Msa0475180-mRNA-1
chr3_3 exon 78232839 78233170 78232839 ID=Msa0475180-mRNA-1:exon:21060;Parent=Msa0475180-mRNA-1
chr3_3 exon 78233242 78233322 78233242 ID=Msa0475180-mRNA-1:exon:21059;Parent=Msa0475180-mRNA-1
chr3_3 exon 78234318 78234440 78234318 ID=Msa0475180-mRNA-1:exon:21058;Parent=Msa0475180-mRNA-1
chr3_3 exon 78234535 78235110 78234535 ID=Msa0475180-mRNA-1:exon:21057;Parent=Msa0475180-mRNA-1
chr3_3 exon 78235247 78235346 78235247 ID=Msa0475180-mRNA-1:exon:21056;Parent=Msa0475180-mRNA-1
chr3_3 exon 78236503 78236702 78236503 ID=Msa0475180-mRNA-1:exon:21055;Parent=Msa0475180-mRNA-1
chr3_3 exon 78236831 78237028 78236831 ID=Msa0475180-mRNA-1:exon:21054;Parent=Msa0475180-mRNA-1
chr3_3 exon 78237793 78237935 78237793 ID=Msa0475180-mRNA-1:exon:21053;Parent=Msa0475180-mRNA-1
chr3_3 exon 78238058 78238326 78238058 ID=Msa0475180-mRNA-1:exon:21052;Parent=Msa0475180-mRNA-1
chr3_3 exon 78238921 78239268 78238921 ID=Msa0475180-mRNA-1:exon:21051;Parent=Msa0475180-mRNA-1
chr3_3 five_prime_UTR 78239070 78239268 78239070 ID=Msa0475180-mRNA-1:five_prime_utr;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78238921 78239069 78238921 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78238058 78238326 78238058 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78237793 78237935 78237793 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78236831 78237028 78236831 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78236503 78236702 78236503 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78235247 78235346 78235247 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78234535 78235110 78234535 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78234318 78234440 78234318 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78233242 78233322 78233242 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78232839 78233170 78232839 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78232459 78232716 78232459 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78232022 78232106 78232022 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78231712 78231922 78231712 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78229931 78230099 78229931 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 CDS 78227960 78228098 78227960 ID=Msa0475180-mRNA-1:cds;Parent=Msa0475180-mRNA-1
chr3_3 three_prime_UTR 78227649 78227959 78227649 ID=Msa0475180-mRNA-1:three_prime_utr;Parent=Msa0475180-mRNA-1
Gene Sequence

>Msa0475180

ATGGATTCTCAACAAGCTCACGCTCACATTCAGATAGATCGCAGAATAGACGCTCTTGGCGATCTTCGAGTTCTTCCCGATGAAATCCTCTGCTCAATTCTCGAACGTCTCACTCCTCAAGATGCTGCTCGCGTCGCTTGCGTTAGCAGTGTGATGTATATACTATCCAATGAAGAACCACTATGGATGACTCTATGCCTAAAAGGAGGAGCATCTGGTTTTCTTCAATACAAAGGCTCTTGGAAGAAAACTGCTCTGCATAAGTACAATGTCGCTCACTCTCTCAATGTACAATTGCCTGTTTTATTCATTTTTATATTTAATGCTAACATATTTGGAATCGGATATTTTGAATGCAGTTTGAATCTTCCAGAGAAGTACAAAGAGTGCCATAGACAGCAGCCTTTACATTTTGATGGATTCAACTCTTTGTTTTTGTATCGGAGATTATACCGGTGTCATACCACACTGGATACATTTTATACAGAGGGTGGCAATGTGGAAAGAATAAATGACATCTCAATGAAGGACTTCAACGACAAGTATGACATGAAGAAACCGGTCATGCTAAATGGACTGGCGAATACATGGCCTGCCAGGCAGAAATGGACAACTGATCAGCTGTTACAAAACTATGGAGATGTTGCATTTAAAATTTCTCAAAGGAGTTCCAAAAAGATCTCCATGAAGTTCAAGGATTATGTCTCATACATGGAAGTTCAACACGATGAAGACCCATTATATATTTTCGACGAAAAGTTTGGCGAACATGCCCCTAGCTTATTGAAGGATTACTGCGTGCCTCATCTTTTTCAAGAAGACCTCTTCGATATCTTAGATACAGATAAACGACCATCCTATAGGTGGCTTATAATTGGACCACAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACAAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCATTATATCCTCCTGGAAAAGTGCCTTTAGGTGTGACGGTGCATGTTAATGAAGAAGATGGTGATGTCAGTATTGAGACTCCATCATCACTGCAGTGGTGGTTAGATTTTTATCCTCTTCTTGCTGACGAAGACAAGCCAATTGAATGTACACAACTACCTGGAGAGACAATTTATGTTCCGAGTGGATGGTGGCACTGTATTTTAAATTTGGAAACAACTATTGCAGTCACGCAGAATTTTGTGAATTCTAATAACTTCGAATTTGTATGTTTGGATATGGCACCTGGTTATCGTCATAAAGGAGTCTGCCGTGTGGGTTTGCTTGCTCTTGAAGAAGATGTTTATGAAAATGTCATACAGAACATGTCATGTAATGAAGAAAACTTAAGTTACTCTGATTTGTCAAGGAAAGAGAAAAGATCCAAAACTCTGAAAGATGTAGACGATCTATGTTTAGAAAGAGAAATAAGTGGTGCATCCAGAAGCTATAATTTATGGAAAGGTGGATTTTCTTATGATATAAATTTCTTATCCATGTTTTTGGATAAGGATAGAGACCACTACAATTTTGAGTGGAGCTCGGGCAACAGCATTGGTCAACGGGAACTAAGAGAATGGTTGTCCAAGCTTTGGATTCAAAAACCAGATATGAGAGATCTAATATGGAAGGGAGCATGCATTGCACTAAATGCCGGCAAGTGGTTAGAATGCCTGTCAAAAATTTGTGCCTTCAACAACTTGCCCCCTCCCACAGATGACGAAAGGCTTCCTGTTGGTTCGGGTAGCAATCCTGTTTATCTAGTGGGGAACTATGTTGTTAAGATTTTTGTCGAAGAAGGACTGGAAGCATCGCTTTATGGTTTAGGCACAGAGTTAGAGTTTTACAGTCTGCGGCTTGAAGCCAACTCCCCTCTCAGGAAACATATTCCTAGTGTTATGGCCAGTGGGGTTGTTTATCTTGAAGACGAATCCTATACCAATTTAAGTTGGGATGGAAAAGGAGTTCCCAGTGTCATTTTGAAGAGCAATATCATCACAGAGAAATGCAACGTGGATGGTTTCCCGTTTGGGGTATGGGGCAAGCAATTGTTTGAGTATAGGAATACTGGGATTCCGGCGGACGGATCAGTTAGTTTAGCCGGTAACTCAAGTATATGGCCATATTTGATAATTAAGCGATGTGAGGGGAATATGTTTGCAGACTTAAGAGACAGACTATCGTGGGAAGATACAACAAACTTGGCCTCCTTCCTGGGGGAGCAAATGCGCCACCTTCATCTTTTACCACATCCACCTTTAAATAATTCATTTATATCTGATATTGAACGTGAATTAAACTGGTCTGAGGTGAAAGGTTGCACTGCAAATGTTAATTGTAAATCAAACAATGCAGCAGAATGGGGACTCTTCACCAGAATCTTAACAAAGAAGAGGAAGGACGTCTCAAGCCGTTTGACCAAGTGGGGAGATCCAATTCCTAGCAAACTGATTGAGAAAATCGATGAATATCTACCATCTGATTTATCTAAGCTGCTAAATATAAATGAGAATTTCTCAAGTGGCACTTCTAAACCCTGCTCTTGGATACACACTGACATTATGGATGATAATATTTACATGGAACCATCATCGATTTGCTCTACCTCCAGTGGGAATACAGAAGATGCTGCCGAGGGGGACAATGGTTTATTGAGTGACCACGTTGGAGTGAAATCCTGGTGTCCTAGTTACCTCCTTGATTTCAGTGATCTTTCTATGGGTGATCCTATTTTTGACTTGATACCAATTTATTTGGATGTGTTTAGAGGCGATTCATATCTTCTTAAGCAATTTTTAGAAAGTTACAAACTTCCTTTTTCTGGCAACATATCAAAGTACGAGTCAACAGAGGGTGGTCTAAAGTTTGGTCGACTTTCATATGTTGCTATGTGTTATTGTATTTTGCATGACGATAATGTCTTGGGAGCTATTTTTAGCATATGGGACGAACTGAGATCATCAGAGTCATGGGAAGAAGTTGAGATGACAGTGTGGGGAGAGTTGAACAATTACAAAGGCTTTCTTTGA
Protein sequence

>Msa0475180

MDSQQAHAHIQIDRRIDALGDLRVLPDEILCSILERLTPQDAARVACVSSVMYILSNEEPLWMTLCLKGGASGFLQYKGSWKKTALHKYNVAHSLNVQLPVLFIFIFNANIFGIGYFECSLNLPEKYKECHRQQPLHFDGFNSLFLYRRLYRCHTTLDTFYTEGGNVERINDISMKDFNDKYDMKKPVMLNGLANTWPARQKWTTDQLLQNYGDVAFKISQRSSKKISMKFKDYVSYMEVQHDEDPLYIFDEKFGEHAPSLLKDYCVPHLFQEDLFDILDTDKRPSYRWLIIGPQRSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVSIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCILNLETTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRVGLLALEEDVYENVIQNMSCNEENLSYSDLSRKEKRSKTLKDVDDLCLEREISGASRSYNLWKGGFSYDINFLSMFLDKDRDHYNFEWSSGNSIGQRELREWLSKLWIQKPDMRDLIWKGACIALNAGKWLECLSKICAFNNLPPPTDDERLPVGSGSNPVYLVGNYVVKIFVEEGLEASLYGLGTELEFYSLRLEANSPLRKHIPSVMASGVVYLEDESYTNLSWDGKGVPSVILKSNIITEKCNVDGFPFGVWGKQLFEYRNTGIPADGSVSLAGNSSIWPYLIIKRCEGNMFADLRDRLSWEDTTNLASFLGEQMRHLHLLPHPPLNNSFISDIERELNWSEVKGCTANVNCKSNNAAEWGLFTRILTKKRKDVSSRLTKWGDPIPSKLIEKIDEYLPSDLSKLLNINENFSSGTSKPCSWIHTDIMDDNIYMEPSSICSTSSGNTEDAAEGDNGLLSDHVGVKSWCPSYLLDFSDLSMGDPIFDLIPIYLDVFRGDSYLLKQFLESYKLPFSGNISKYESTEGGLKFGRLSYVAMCYCILHDDNVLGAIFSIWDELRSSESWEEVEMTVWGELNNYKGFL*