Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379810 | XP_003602916.2 | 76.305 | 498 | 68 | 7 | 12 | 459 | 1 | 498 | 0.0 | 735 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379810 | G7J542 | 76.305 | 498 | 68 | 7 | 12 | 459 | 1 | 498 | 0.0 | 735 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0379810 | Msa0475570 | 0.815258 | 1.013798e-51 | -8.615850e-47 |
| Msa0379810 | Msa0475720 | 0.946856 | 2.072901e-105 | -8.615850e-47 |
| Msa0379810 | Msa0828680 | 0.809491 | 1.843457e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379810 | MtrunA17_Chr3g0132981 | 76.305 | 498 | 68 | 7 | 12 | 459 | 1 | 498 | 0.0 | 735 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379810 | AT2G19260.2 | 60.563 | 142 | 53 | 2 | 310 | 451 | 478 | 616 | 2.64e-49 | 178 |
| Msa0379810 | AT2G19260.1 | 60.563 | 142 | 53 | 2 | 310 | 451 | 478 | 616 | 2.64e-49 | 178 |
Find 123 sgRNAs with CRISPR-Local
Find 660 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCCTGTATACCAAATT+AGG | 0.145112 | 3_1:+81205091 | None:intergenic |
| CTGCCTTCTGTCTTTCTTGA+TGG | 0.157712 | 3_1:-81204896 | Msa0379810:CDS |
| TGAAAACACTGCACCTAATT+TGG | 0.214850 | 3_1:-81205104 | Msa0379810:CDS |
| ATTTCAATTTGATGCTTAAC+TGG | 0.257269 | 3_1:+81204935 | None:intergenic |
| AGATTTCATCCCCATTTCTT+AGG | 0.268166 | 3_1:-81197987 | Msa0379810:three_prime_UTR |
| GGATTAATTTGCAATGGTTC+TGG | 0.279634 | 3_1:+81203344 | None:intergenic |
| CCACGTATCAACAGTGGAAT+AGG | 0.299158 | 3_1:-81204393 | Msa0379810:CDS |
| TTCCTCTTCAAAGTCAAATA+TGG | 0.306991 | 3_1:-81204816 | Msa0379810:CDS |
| GTCATTATGCTTGCAGTTGA+TGG | 0.308475 | 3_1:+81205127 | None:intergenic |
| GGGAAATTATATGTGGAAAA+TGG | 0.312495 | 3_1:-81203132 | Msa0379810:CDS |
| ATCTCTCAACATCAACAGTA+TGG | 0.312758 | 3_1:+81204332 | None:intergenic |
| ACTTGTGAATGAAGTAAAAT+TGG | 0.312843 | 3_1:+81205003 | None:intergenic |
| ACAAGATTATTGCAAAGAAA+TGG | 0.314663 | 3_1:+81197813 | None:intergenic |
| ACTGGTCAGGCCCTGTAAAA+AGG | 0.314665 | 3_1:-81204251 | Msa0379810:intron |
| AAAAGCCATGGACTTCTTAG+AGG | 0.335899 | 3_1:-81204669 | Msa0379810:CDS |
| AAAAGCTATAACCTAAGAAA+TGG | 0.340206 | 3_1:+81197976 | None:intergenic |
| ATCCATAGTGGTGAGAATTC+TGG | 0.347040 | 3_1:-81198138 | Msa0379810:three_prime_UTR |
| AAATCAGATTGCACAAATAA+TGG | 0.364920 | 3_1:-81198171 | Msa0379810:CDS |
| AGGCAAGTTTGCAGGAATCT+TGG | 0.369879 | 3_1:+81197777 | None:intergenic |
| AACCAATGGAAGAGGATAAT+AGG | 0.372313 | 3_1:-81205198 | Msa0379810:CDS |
| GACATGGAACACATACAATA+TGG | 0.374403 | 3_1:+81198076 | None:intergenic |
| ACTCGCACACCAGTCGTATA+TGG | 0.376421 | 3_1:+81204303 | None:intergenic |
| AAAGCTATAACCTAAGAAAT+GGG | 0.376863 | 3_1:+81197977 | None:intergenic |
| ATTCAGAATCGTATTTGAAT+TGG | 0.378334 | 3_1:-81197740 | Msa0379810:three_prime_UTR |
| GGAGTCCATTACTATTAAAC+TGG | 0.383396 | 3_1:+81204736 | None:intergenic |
| CCGTTAATAACTGCTGTTCC+AGG | 0.393854 | 3_1:-81204599 | Msa0379810:CDS |
| ATCCAGAATTCTCACCACTA+TGG | 0.394518 | 3_1:+81198136 | None:intergenic |
| TTTGGTAGAAATGATAGCTT+GGG | 0.402062 | 3_1:-81197951 | Msa0379810:three_prime_UTR |
| TTGAAGTTCAAACCGATGAC+TGG | 0.411899 | 3_1:-81199530 | Msa0379810:CDS |
| CTCCTCCAGTTTAATAGTAA+TGG | 0.416267 | 3_1:-81204741 | Msa0379810:CDS |
| GACTCAGTTCCATTGGCAAC+TGG | 0.419564 | 3_1:-81203186 | Msa0379810:CDS |
| TGCTGATTGTGCTGTACCTC+AGG | 0.420947 | 3_1:-81199472 | Msa0379810:intron |
| CCGACATAAGGCAAGTTTGC+AGG | 0.423473 | 3_1:+81197769 | None:intergenic |
| CTTCTTAGTTCAGTTGAAGC+TGG | 0.423834 | 3_1:-81205340 | Msa0379810:CDS |
| ATCTAGAACTGTCTCAGTTA+AGG | 0.430840 | 3_1:-81204367 | Msa0379810:CDS |
| CAGAATCGTATTTGAATTGG+TGG | 0.438428 | 3_1:-81197737 | None:intergenic |
| CATCAATTGGGTAATGTTGA+AGG | 0.444376 | 3_1:+81197896 | None:intergenic |
| TTCCTATTATCCTCTTCCAT+TGG | 0.446285 | 3_1:+81205196 | None:intergenic |
| CTGCACCTAATTTGGTATAC+AGG | 0.447123 | 3_1:-81205096 | Msa0379810:CDS |
| TGGCAACTGGCTTCAATGCC+GGG | 0.448378 | 3_1:-81203173 | Msa0379810:CDS |
| GCCTAGTGGTGAAACTTGTC+AGG | 0.449374 | 3_1:-81205269 | Msa0379810:CDS |
| GCAACTGAAGTATATAGAAA+TGG | 0.449691 | 3_1:-81198659 | Msa0379810:intron |
| CAAGATTATTGCAAAGAAAT+GGG | 0.450249 | 3_1:+81197814 | None:intergenic |
| TTCTGTTAATTCTTCCCTTG+TGG | 0.451346 | 3_1:+81204715 | None:intergenic |
| TTCAAGCAGCAGTCCTTGAC+TGG | 0.453183 | 3_1:-81204269 | Msa0379810:CDS |
| CCAATGGAACTGAGTCTAGT+TGG | 0.456915 | 3_1:+81203193 | None:intergenic |
| TTGGCAACTGGCTTCAATGC+CGG | 0.457404 | 3_1:-81203174 | Msa0379810:CDS |
| TAACTGGAAAAGCAGCTGTT+TGG | 0.459703 | 3_1:+81204951 | None:intergenic |
| GGTGGTAACGGCATCTTCAA+TGG | 0.462759 | 3_1:+81204620 | None:intergenic |
| GGGAGGTTATAGACAAAACT+AGG | 0.470852 | 3_1:-81203153 | Msa0379810:CDS |
| CTTAGACAGTTTGAGTTGAA+AGG | 0.472980 | 3_1:+81205163 | None:intergenic |
| GCGATGGTTTCCCTCATGAT+AGG | 0.477667 | 3_1:+81197918 | None:intergenic |
| GCAGCAGTCCTTGACTGGTC+AGG | 0.487944 | 3_1:-81204264 | Msa0379810:CDS |
| CACGTATCAACAGTGGAATA+GGG | 0.490240 | 3_1:-81204392 | Msa0379810:CDS |
| AAGGGAAGAATTAACAGAAA+AGG | 0.490860 | 3_1:-81204711 | Msa0379810:CDS |
| CAAAATGCCACTGGATGACA+TGG | 0.491712 | 3_1:+81198060 | None:intergenic |
| CTGAATATACGACCGACATA+AGG | 0.498543 | 3_1:+81197757 | None:intergenic |
| CCTGGAACAGCAGTTATTAA+CGG | 0.498635 | 3_1:+81204599 | None:intergenic |
| GTCATCCATCTCAGTTGCTA+TGG | 0.501394 | 3_1:+81204778 | None:intergenic |
| CTATGTTATGTATATGATGA+TGG | 0.506451 | 3_1:-81205316 | Msa0379810:CDS |
| ACTGGTGTGCGAGTTGGTAA+AGG | 0.509532 | 3_1:-81204294 | Msa0379810:CDS |
| AAGTTTCACCACTAGGCATC+CGG | 0.511152 | 3_1:+81205275 | None:intergenic |
| CAATATGGCTTTCTCTGACA+AGG | 0.515763 | 3_1:+81198091 | None:intergenic |
| TCTGAAGGATTAATTTGCAA+TGG | 0.523395 | 3_1:+81203338 | None:intergenic |
| TACCATATTTGACTTTGAAG+AGG | 0.529766 | 3_1:+81204814 | None:intergenic |
| TTCAGAAATTTATAGACCGC+AGG | 0.529919 | 3_1:-81203321 | Msa0379810:intron |
| CTCTGTTTCGCAGCAAGTCG+CGG | 0.535369 | 3_1:+81198195 | None:intergenic |
| TCGGTTTGAACTTCAAATAG+TGG | 0.539950 | 3_1:+81199537 | None:intergenic |
| AGAAAGACAGAAGGCAGAGT+AGG | 0.541798 | 3_1:+81204902 | None:intergenic |
| AAAAGCTGAACCAATGGAAG+AGG | 0.542617 | 3_1:-81205206 | Msa0379810:CDS |
| TTGGGTAATGTTGAAGGCGA+TGG | 0.543158 | 3_1:+81197902 | None:intergenic |
| AGATTCCATAGCAACTGAGA+TGG | 0.550596 | 3_1:-81204783 | Msa0379810:CDS |
| TTTGCACTTGTCATCAGCTG+AGG | 0.553862 | 3_1:-81204975 | Msa0379810:CDS |
| CCAACTAGACTCAGTTCCAT+TGG | 0.554372 | 3_1:-81203193 | Msa0379810:CDS |
| AAAACTAGGGAAATTATATG+TGG | 0.554778 | 3_1:-81203139 | Msa0379810:CDS |
| TTCAAAATACACACTCCCAC+CGG | 0.556938 | 3_1:-81207057 | Msa0379810:five_prime_UTR |
| TTACAGGGCCTGACCAGTCA+AGG | 0.559672 | 3_1:+81204256 | None:intergenic |
| GCACTTGTCTGCACATCGGT+CGG | 0.559798 | 3_1:+81205025 | None:intergenic |
| GCAACAAGTACCCTGCTGAC+TGG | 0.560642 | 3_1:-81205234 | Msa0379810:CDS |
| TTATATGTGGAAAATGGCGC+AGG | 0.561470 | 3_1:-81203126 | Msa0379810:intron |
| TGCGGTCTATAAATTTCTGA+AGG | 0.561834 | 3_1:+81203323 | None:intergenic |
| CCTGCAAACTTGCCTTATGT+CGG | 0.562062 | 3_1:-81197769 | Msa0379810:three_prime_UTR |
| CATTACTATTAAACTGGAGG+AGG | 0.567120 | 3_1:+81204742 | None:intergenic |
| TGAAGTTCAAACCGATGACT+GGG | 0.570865 | 3_1:-81199529 | Msa0379810:CDS |
| GCAGTTATTAACGGTGGTAA+CGG | 0.572035 | 3_1:+81204608 | None:intergenic |
| CAGAGACTCAAGAGAACGAA+GGG | 0.578831 | 3_1:+81206996 | None:intergenic |
| GTGTAGAAAAGCTGAACCAA+TGG | 0.583872 | 3_1:-81205212 | Msa0379810:CDS |
| CCTATTCCACTGTTGATACG+TGG | 0.585601 | 3_1:+81204393 | None:intergenic |
| GCATTGAAGCCAGTTGCCAA+TGG | 0.585878 | 3_1:+81203177 | None:intergenic |
| TCTCTCAACATCAACAGTAT+GGG | 0.587204 | 3_1:+81204333 | None:intergenic |
| ACAGAAGCACTCCCAGTCAT+CGG | 0.588116 | 3_1:+81199518 | None:intergenic |
| TAATAGTAATGGACTCCACA+AGG | 0.589290 | 3_1:-81204730 | Msa0379810:CDS |
| TATACGACTGGTGTGCGAGT+TGG | 0.590103 | 3_1:-81204300 | Msa0379810:CDS |
| TATGTTATGTATATGATGAT+GGG | 0.592983 | 3_1:-81205315 | Msa0379810:CDS |
| TCCAGGTCATGCAAAATATG+TGG | 0.597837 | 3_1:-81204582 | Msa0379810:intron |
| AGATACTCTTACAGATAATG+TGG | 0.604361 | 3_1:-81204646 | Msa0379810:CDS |
| GTCCATTACTATTAAACTGG+AGG | 0.605303 | 3_1:+81204739 | None:intergenic |
| ACAGCACAATCAGCATGAGA+TGG | 0.605642 | 3_1:+81199480 | None:intergenic |
| TATCTCCTCTAAGAAGTCCA+TGG | 0.605795 | 3_1:+81204664 | None:intergenic |
| GGCAATTGAAGAATCCATAG+TGG | 0.606338 | 3_1:-81198150 | Msa0379810:exon |
| ATTCCACTGTTGATACGTGG+TGG | 0.618449 | 3_1:+81204396 | None:intergenic |
| CAACGTGACCGGATGCCTAG+TGG | 0.622842 | 3_1:-81205283 | Msa0379810:CDS |
| ACCTGACAAGTTTCACCACT+AGG | 0.624843 | 3_1:+81205268 | None:intergenic |
| TCAAACTGTCTAAGAAGCTG+TGG | 0.626076 | 3_1:-81205154 | Msa0379810:CDS |
| ATCAGTGATGAATGATGTGT+GGG | 0.628861 | 3_1:+81206970 | None:intergenic |
| GATACTGAGCCATATACGAC+TGG | 0.630007 | 3_1:-81204312 | Msa0379810:CDS |
| TTGGTAGAAATGATAGCTTG+GGG | 0.631069 | 3_1:-81197950 | Msa0379810:three_prime_UTR |
| AGCTGATGACAAGTGCAAAG+AGG | 0.633110 | 3_1:+81204979 | None:intergenic |
| AAGCTATAACCTAAGAAATG+GGG | 0.639160 | 3_1:+81197978 | None:intergenic |
| GGAGGTTATAGACAAAACTA+GGG | 0.658232 | 3_1:-81203152 | Msa0379810:CDS |
| GCAGGAGGTGGAAACAGATG+AGG | 0.662977 | 3_1:-81198689 | Msa0379810:intron |
| TGGTAGAAATGATAGCTTGG+GGG | 0.671047 | 3_1:-81197949 | Msa0379810:three_prime_UTR |
| ACTCCATCAAGAAAGACAGA+AGG | 0.671873 | 3_1:+81204893 | None:intergenic |
| AATCAGTGATGAATGATGTG+TGG | 0.675306 | 3_1:+81206969 | None:intergenic |
| AAACCACCACGTATCAACAG+TGG | 0.676321 | 3_1:-81204399 | Msa0379810:CDS |
| AATAGTAATGGACTCCACAA+GGG | 0.679473 | 3_1:-81204729 | Msa0379810:CDS |
| GCAGAGACTCAAGAGAACGA+AGG | 0.680165 | 3_1:+81206995 | None:intergenic |
| ATTGGCACTTGTCTGCACAT+CGG | 0.680439 | 3_1:+81205021 | None:intergenic |
| ATGTGTTCCATGTCATCCAG+TGG | 0.680850 | 3_1:-81198067 | Msa0379810:three_prime_UTR |
| CAACTGGCTTCAATGCCGGG+AGG | 0.715328 | 3_1:-81203170 | Msa0379810:CDS |
| GCAACTGAGATGGATGACAC+TGG | 0.735945 | 3_1:-81204773 | Msa0379810:CDS |
| GGAACAGCAGTTATTAACGG+TGG | 0.741703 | 3_1:+81204602 | None:intergenic |
| AGAGACTCAAGAGAACGAAG+GGG | 0.761631 | 3_1:+81206997 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTTCAATAATAATATT+TGG | + | chr3_1:81198664-81198683 | None:intergenic | 10.0% |
| !! | AATACTATTATAAATATATG+TGG | - | chr3_1:81201333-81201352 | Msa0379810:intron | 10.0% |
| !! | TGTTATTAAATATTAGAAAT+TGG | - | chr3_1:81202455-81202474 | Msa0379810:intron | 10.0% |
| !! | GTTATTAAATATTAGAAATT+GGG | - | chr3_1:81202456-81202475 | Msa0379810:intron | 10.0% |
| !!! | AATTTTTTTTGTCAAAAATA+CGG | + | chr3_1:81204342-81204361 | None:intergenic | 10.0% |
| !!! | CATTTATGATTTTTCATTTA+TGG | - | chr3_1:81198879-81198898 | Msa0379810:intron | 15.0% |
| !! | AATATGATAACATGATAATA+TGG | + | chr3_1:81200883-81200902 | None:intergenic | 15.0% |
| !! | AGTAATATTCTTAAAAGTTA+AGG | + | chr3_1:81201091-81201110 | None:intergenic | 15.0% |
| !!! | TAAACAAAGAAGTTTTTAAT+AGG | + | chr3_1:81201779-81201798 | None:intergenic | 15.0% |
| !! | GTAATCAATAATTATTAAGA+GGG | + | chr3_1:81204406-81204425 | None:intergenic | 15.0% |
| !! | AGTAATCAATAATTATTAAG+AGG | + | chr3_1:81204407-81204426 | None:intergenic | 15.0% |
| !!! | TATTTTGAATAGAATCCAAA+AGG | + | chr3_1:81197748-81197767 | None:intergenic | 20.0% |
| !! | ATTATTGAATAAACAAAGAG+AGG | - | chr3_1:81198084-81198103 | Msa0379810:three_prime_UTR | 20.0% |
| !!! | ATTAATCTCTAGATTTTTCT+AGG | + | chr3_1:81198340-81198359 | None:intergenic | 20.0% |
| !! | ATATCTCCATAGTAAATTTA+GGG | - | chr3_1:81198680-81198699 | Msa0379810:CDS | 20.0% |
| !! | TTTGTAAAGTTAAAAGTTAC+AGG | + | chr3_1:81199129-81199148 | None:intergenic | 20.0% |
| !!! | TTTTAACTTTACAAATTTGC+AGG | - | chr3_1:81199134-81199153 | Msa0379810:intron | 20.0% |
| !!! | GAGTCTTATATTTTGTTTAA+TGG | - | chr3_1:81199169-81199188 | Msa0379810:intron | 20.0% |
| !! | TTGTTTAATGGCAAATATAT+TGG | - | chr3_1:81199181-81199200 | Msa0379810:intron | 20.0% |
| !!! | TTGTTTGTTATTTTCAAATC+AGG | - | chr3_1:81199272-81199291 | Msa0379810:intron | 20.0% |
| !! | ATTCAAGATTATTGAATCTT+TGG | + | chr3_1:81199343-81199362 | None:intergenic | 20.0% |
| !! | TATGTTATGTATATGATGAT+GGG | - | chr3_1:81199501-81199520 | Msa0379810:CDS | 20.0% |
| !!! | CATTAATATTTTAAAAGCCA+TGG | - | chr3_1:81200135-81200154 | Msa0379810:intron | 20.0% |
| !! | TTGTTCACATAAAATATACT+TGG | + | chr3_1:81200700-81200719 | None:intergenic | 20.0% |
| !! | AAAAACAAAACGATAATCAT+GGG | + | chr3_1:81201428-81201447 | None:intergenic | 20.0% |
| !! | AAAAAACAAAACGATAATCA+TGG | + | chr3_1:81201429-81201448 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAAATTGTAGAA+TGG | - | chr3_1:81201815-81201834 | Msa0379810:intron | 20.0% |
| !! | GTTTATCATTATACACATAA+AGG | + | chr3_1:81202117-81202136 | None:intergenic | 20.0% |
| !!! | CATTTTGTTCTTAGAATAAT+AGG | + | chr3_1:81202368-81202387 | None:intergenic | 20.0% |
| !!! | CTATTATTCTAAGAACAAAA+TGG | - | chr3_1:81202366-81202385 | Msa0379810:intron | 20.0% |
| !! | GATATAGAATACAAAAGATT+TGG | + | chr3_1:81202787-81202806 | None:intergenic | 20.0% |
| !!! | TTATTTTTTAAATCAGGGAA+AGG | - | chr3_1:81202888-81202907 | Msa0379810:intron | 20.0% |
| !!! | TATTTTTTAAATCAGGGAAA+GGG | - | chr3_1:81202889-81202908 | Msa0379810:intron | 20.0% |
| !!! | AAACTTTTGTAAGCTAAAAA+AGG | + | chr3_1:81203121-81203140 | None:intergenic | 20.0% |
| !!! | TTTTAGCTTACAAAAGTTTT+TGG | - | chr3_1:81203122-81203141 | Msa0379810:intron | 20.0% |
| !! | TTAAAAAATGCCTTAATACA+CGG | + | chr3_1:81203206-81203225 | None:intergenic | 20.0% |
| !!! | TTTTTAAATCAAATTGTTGC+AGG | - | chr3_1:81203219-81203238 | Msa0379810:intron | 20.0% |
| !! | GTATAGTTATAGTAATGTTT+AGG | - | chr3_1:81203495-81203514 | Msa0379810:intron | 20.0% |
| !! | AATGTTCAAATCAAAGTAAT+TGG | - | chr3_1:81203545-81203564 | Msa0379810:intron | 20.0% |
| !! | ATGTTCAAATCAAAGTAATT+GGG | - | chr3_1:81203546-81203565 | Msa0379810:intron | 20.0% |
| !! | CCAAATATTACTTTAATCAT+GGG | + | chr3_1:81204368-81204387 | None:intergenic | 20.0% |
| !! | AAAAAACGACATTATATGAT+AGG | - | chr3_1:81204559-81204578 | Msa0379810:intron | 20.0% |
| !! | AACATTTCAATAACGATTAT+GGG | + | chr3_1:81205080-81205099 | None:intergenic | 20.0% |
| !! | AAACATTTCAATAACGATTA+TGG | + | chr3_1:81205081-81205100 | None:intergenic | 20.0% |
| !! | CTAAAGACTTCAAATTTAAT+TGG | + | chr3_1:81205575-81205594 | None:intergenic | 20.0% |
| !!! | GTTTTTCAAAATTAGTCTTT+TGG | - | chr3_1:81205703-81205722 | Msa0379810:intron | 20.0% |
| !! | GCAAATAAATAAAGAAAGAT+TGG | + | chr3_1:81206106-81206125 | None:intergenic | 20.0% |
| !! | TATTATGCAACGATTAAATA+AGG | - | chr3_1:81206274-81206293 | Msa0379810:intron | 20.0% |
| !!! | ACTTAAGTTTTACATTTTCT+AGG | - | chr3_1:81206407-81206426 | Msa0379810:intron | 20.0% |
| !!! | TTAGGTTATAGCTTTTATTT+TGG | - | chr3_1:81206847-81206866 | Msa0379810:intron | 20.0% |
| !! | CAAAAAAATTGACATCAATT+GGG | + | chr3_1:81206935-81206954 | None:intergenic | 20.0% |
| !! | TCAAAAAAATTGACATCAAT+TGG | + | chr3_1:81206936-81206955 | None:intergenic | 20.0% |
| ! | ATAACAGAAAAATCAGAAAG+CGG | + | chr3_1:81197922-81197941 | None:intergenic | 25.0% |
| !!! | CTTGCTTTTGATATATTGTA+TGG | - | chr3_1:81198010-81198029 | Msa0379810:three_prime_UTR | 25.0% |
| ! | TAGCTTACGATAAAACATTA+TGG | - | chr3_1:81198376-81198395 | Msa0379810:intron | 25.0% |
| ! | CATATCTCCATAGTAAATTT+AGG | - | chr3_1:81198679-81198698 | Msa0379810:CDS | 25.0% |
| ! | TGGATAGTAATAACCAAATT+TGG | + | chr3_1:81198757-81198776 | None:intergenic | 25.0% |
| ! | TATAACTGAAGAATCAACTT+AGG | + | chr3_1:81199053-81199072 | None:intergenic | 25.0% |
| !!! | TTTGTTATTTTCAAATCAGG+TGG | - | chr3_1:81199275-81199294 | Msa0379810:intron | 25.0% |
| ! | AAGATAAAGAGTTCAGATAA+TGG | + | chr3_1:81199385-81199404 | None:intergenic | 25.0% |
| ! | TTATCTGAACTCTTTATCTT+TGG | - | chr3_1:81199385-81199404 | Msa0379810:intron | 25.0% |
| ! | TATCTGAACTCTTTATCTTT+GGG | - | chr3_1:81199386-81199405 | Msa0379810:intron | 25.0% |
| !! | ATTCTCTTTGAGTTTAATTC+AGG | - | chr3_1:81199430-81199449 | Msa0379810:intron | 25.0% |
| ! | CTATGTTATGTATATGATGA+TGG | - | chr3_1:81199500-81199519 | Msa0379810:CDS | 25.0% |
| ! | ACTTGTGAATGAAGTAAAAT+TGG | + | chr3_1:81199816-81199835 | None:intergenic | 25.0% |
| ! | ATTTCAATTTGATGCTTAAC+TGG | + | chr3_1:81199884-81199903 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGTGTGATATCTT+TGG | + | chr3_1:81199951-81199970 | None:intergenic | 25.0% |
| ! | GATATCACACAGAAAAAAAT+AGG | - | chr3_1:81199953-81199972 | Msa0379810:intron | 25.0% |
| ! | GTCATTCATGTCTTAATAAA+AGG | - | chr3_1:81200367-81200386 | Msa0379810:intron | 25.0% |
| ! | TAAAAGGCAAAAATTTCTCA+AGG | - | chr3_1:81200383-81200402 | Msa0379810:intron | 25.0% |
| ! | CGAAACAGTTATGATTAAAA+CGG | + | chr3_1:81200597-81200616 | None:intergenic | 25.0% |
| ! | AAAAACCTAGTACAATTGAT+GGG | + | chr3_1:81200639-81200658 | None:intergenic | 25.0% |
| !!! | CAAGTGAACTGTTTTTAAAA+AGG | + | chr3_1:81200826-81200845 | None:intergenic | 25.0% |
| !!! | CTTTTTAAAAACAGTTCACT+TGG | - | chr3_1:81200824-81200843 | Msa0379810:intron | 25.0% |
| ! | CATAATATTATGCATTCTTG+AGG | + | chr3_1:81200850-81200869 | None:intergenic | 25.0% |
| ! | GTACAAGATATTCATATACA+AGG | - | chr3_1:81201158-81201177 | Msa0379810:intron | 25.0% |
| ! | CTAGAGAGTTGTATAATTAA+AGG | + | chr3_1:81201234-81201253 | None:intergenic | 25.0% |
| ! | TTAATTACTTAGCACTAACT+TGG | + | chr3_1:81201291-81201310 | None:intergenic | 25.0% |
| ! | AAAACTAGGGAAATTATATG+TGG | - | chr3_1:81201677-81201696 | Msa0379810:intron | 25.0% |
| ! | TATCTTAACTGCATTCTAAA+TGG | + | chr3_1:81201930-81201949 | None:intergenic | 25.0% |
| ! | ACAATAAAATCCCTAATAAC+CGG | + | chr3_1:81201990-81202009 | None:intergenic | 25.0% |
| !! | GATTTTATTGTTAAGACTTC+AGG | - | chr3_1:81201999-81202018 | Msa0379810:intron | 25.0% |
| ! | TATCATTATACACATAAAGG+AGG | + | chr3_1:81202114-81202133 | None:intergenic | 25.0% |
| ! | TGTATAATGATAAACATCCA+TGG | - | chr3_1:81202122-81202141 | Msa0379810:intron | 25.0% |
| !! | TGAGAATATTGCAATCTTTT+TGG | + | chr3_1:81202156-81202175 | None:intergenic | 25.0% |
| ! | GTTAATAAAAGATCCTTTAC+AGG | + | chr3_1:81202230-81202249 | None:intergenic | 25.0% |
| ! | AACATCAAGTATGTTATTAC+TGG | - | chr3_1:81202247-81202266 | Msa0379810:intron | 25.0% |
| !!! | TCACATATGAACACTTTTTT+AGG | - | chr3_1:81202530-81202549 | Msa0379810:intron | 25.0% |
| !!! | TTTCTAAGATATATTGGATG+CGG | + | chr3_1:81202561-81202580 | None:intergenic | 25.0% |
| ! | CATCCAATATATCTTAGAAA+CGG | - | chr3_1:81202561-81202580 | Msa0379810:intron | 25.0% |
| ! | TTCTAATAAAATACCAGAAG+TGG | + | chr3_1:81202601-81202620 | None:intergenic | 25.0% |
| !! | ATTTAGAGTTAGTGATTGAT+AGG | + | chr3_1:81202739-81202758 | None:intergenic | 25.0% |
| ! | AAATATTGCGAAGAATCAAA+AGG | - | chr3_1:81202755-81202774 | Msa0379810:intron | 25.0% |
| ! | ACAATTTACAGTAGTATTCA+GGG | - | chr3_1:81202822-81202841 | Msa0379810:intron | 25.0% |
| ! | AGTATTTGATAAATAGAGCA+TGG | - | chr3_1:81203024-81203043 | Msa0379810:intron | 25.0% |
| !!! | AAGCTAAAAAAGGTGTTATA+CGG | + | chr3_1:81203111-81203130 | None:intergenic | 25.0% |
| ! | ACTTGAAGGAAATATTTACA+TGG | + | chr3_1:81203180-81203199 | None:intergenic | 25.0% |
| ! | TCTAGTTGCAAAAATGAATA+CGG | + | chr3_1:81203285-81203304 | None:intergenic | 25.0% |
| ! | TTCTGAATCATATAAAACAC+CGG | + | chr3_1:81203824-81203843 | None:intergenic | 25.0% |
| ! | TTATAGTACATCTGTAAGAT+TGG | - | chr3_1:81203870-81203889 | Msa0379810:intron | 25.0% |
| ! | CCCATGATTAAAGTAATATT+TGG | - | chr3_1:81204365-81204384 | Msa0379810:CDS | 25.0% |
| ! | GCCAAATATTACTTTAATCA+TGG | + | chr3_1:81204369-81204388 | None:intergenic | 25.0% |
| ! | AAAGTAATATTTGGCACTAT+CGG | - | chr3_1:81204374-81204393 | Msa0379810:CDS | 25.0% |
| ! | TCAATAATTATTAAGAGGGT+CGG | + | chr3_1:81204402-81204421 | None:intergenic | 25.0% |
| ! | ATTATATGATAGGTCTTTAG+CGG | - | chr3_1:81204569-81204588 | Msa0379810:intron | 25.0% |
| !! | AATATGAAGGACATTTTGTA+GGG | - | chr3_1:81204629-81204648 | Msa0379810:CDS | 25.0% |
| !! | AGTATCTAATATTGGTTACA+GGG | - | chr3_1:81204802-81204821 | Msa0379810:CDS | 25.0% |
| !! | GGTAAGTTTCAATTTTCTTT+TGG | + | chr3_1:81204847-81204866 | None:intergenic | 25.0% |
| !!! | TTTTGAGATGATAAGTAAAG+GGG | + | chr3_1:81205110-81205129 | None:intergenic | 25.0% |
| !!! | GTTTTGAGATGATAAGTAAA+GGG | + | chr3_1:81205111-81205130 | None:intergenic | 25.0% |
| !!! | AGTTTTGAGATGATAAGTAA+AGG | + | chr3_1:81205112-81205131 | None:intergenic | 25.0% |
| ! | AAGCATCAAAGTCATAAAAA+AGG | + | chr3_1:81205145-81205164 | None:intergenic | 25.0% |
| ! | TTTGATGCTTTCTTAATGAA+AGG | - | chr3_1:81205155-81205174 | Msa0379810:CDS | 25.0% |
| !!! | TCATCTTTCACTTTTATACA+TGG | + | chr3_1:81205185-81205204 | None:intergenic | 25.0% |
| !!! | ATTTTTCTTTTTTGTTTGCC+AGG | - | chr3_1:81205253-81205272 | Msa0379810:CDS | 25.0% |
| !!! | TTTTTCTTTTTTGTTTGCCA+GGG | - | chr3_1:81205254-81205273 | Msa0379810:CDS | 25.0% |
| ! | AGACTTCAAATTTAATTGGA+GGG | + | chr3_1:81205571-81205590 | None:intergenic | 25.0% |
| ! | AAGACTTCAAATTTAATTGG+AGG | + | chr3_1:81205572-81205591 | None:intergenic | 25.0% |
| ! | TACAATTGATGTAACCAATT+GGG | + | chr3_1:81205669-81205688 | None:intergenic | 25.0% |
| ! | TTACAATTGATGTAACCAAT+TGG | + | chr3_1:81205670-81205689 | None:intergenic | 25.0% |
| !!! | GTTTGTCAAAATTAGTCTTT+TGG | - | chr3_1:81205842-81205861 | Msa0379810:intron | 25.0% |
| !! | TTTTTGTTACACATACAGTT+CGG | + | chr3_1:81205889-81205908 | None:intergenic | 25.0% |
| ! | AAAGTTACATCAAATTACAC+AGG | + | chr3_1:81206040-81206059 | None:intergenic | 25.0% |
| !! | ATTTAGAATGATCATAATGC+AGG | + | chr3_1:81206082-81206101 | None:intergenic | 25.0% |
| !!! | TTTACATTTTCTAGGAACAT+TGG | - | chr3_1:81206415-81206434 | Msa0379810:intron | 25.0% |
| ! | AAGCTGTAATTATACAATGA+CGG | + | chr3_1:81206548-81206567 | None:intergenic | 25.0% |
| ! | AAATCAGATTGCACAAATAA+TGG | - | chr3_1:81206645-81206664 | Msa0379810:intron | 25.0% |
| ! | AAAGCTATAACCTAAGAAAT+GGG | + | chr3_1:81206842-81206861 | None:intergenic | 25.0% |
| ! | AAAAGCTATAACCTAAGAAA+TGG | + | chr3_1:81206843-81206862 | None:intergenic | 25.0% |
| ! | CAAGATTATTGCAAAGAAAT+GGG | + | chr3_1:81207005-81207024 | None:intergenic | 25.0% |
| ! | ACAAGATTATTGCAAAGAAA+TGG | + | chr3_1:81207006-81207025 | None:intergenic | 25.0% |
| ! | ATTCAGAATCGTATTTGAAT+TGG | - | chr3_1:81207076-81207095 | Msa0379810:five_prime_UTR | 25.0% |
| ! | GGTTTTTGTTAGGAATGAAA+CGG | + | chr3_1:81197801-81197820 | None:intergenic | 30.0% |
| AATCCTAATCCTAATAGAGA+GGG | + | chr3_1:81198042-81198061 | None:intergenic | 30.0% | |
| TAATCCTAATCCTAATAGAG+AGG | + | chr3_1:81198043-81198062 | None:intergenic | 30.0% | |
| TCTCTATTAGGATTAGGATT+AGG | - | chr3_1:81198042-81198061 | Msa0379810:three_prime_UTR | 30.0% | |
| ATTAGGATTAGGATTAGGAT+AGG | - | chr3_1:81198047-81198066 | Msa0379810:three_prime_UTR | 30.0% | |
| ACGGTTATAAAGGATAAGAA+CGG | + | chr3_1:81198118-81198137 | None:intergenic | 30.0% | |
| AATACCTGTAGTAGAAAAGA+CGG | - | chr3_1:81198204-81198223 | Msa0379810:CDS | 30.0% | |
| ! | AAACATTTTCCATGTTCGTA+CGG | + | chr3_1:81198518-81198537 | None:intergenic | 30.0% |
| CAAGTTCCCTAAATTTACTA+TGG | + | chr3_1:81198689-81198708 | None:intergenic | 30.0% | |
| CATAGATAATGTTGCATAGA+TGG | + | chr3_1:81198821-81198840 | None:intergenic | 30.0% | |
| CATCTATGCAACATTATCTA+TGG | - | chr3_1:81198819-81198838 | Msa0379810:intron | 30.0% | |
| AATAAGAATGTAGTGCAAGA+GGG | + | chr3_1:81199239-81199258 | None:intergenic | 30.0% | |
| TAATAAGAATGTAGTGCAAG+AGG | + | chr3_1:81199240-81199259 | None:intergenic | 30.0% | |
| ! | ATAAAGAGTTCAGATAATGG+CGG | + | chr3_1:81199382-81199401 | None:intergenic | 30.0% |
| ATCTGAACTCTTTATCTTTG+GGG | - | chr3_1:81199387-81199406 | Msa0379810:intron | 30.0% | |
| TTTCTCCTGTATACCAAATT+AGG | + | chr3_1:81199728-81199747 | None:intergenic | 30.0% | |
| !! | AATTCTTCTCTTTTCAAGCT+AGG | - | chr3_1:81199767-81199786 | Msa0379810:intron | 30.0% |
| !! | ATTCTTCTCTTTTCAAGCTA+GGG | - | chr3_1:81199768-81199787 | Msa0379810:intron | 30.0% |
| TTCCTCTTCAAAGTCAAATA+TGG | - | chr3_1:81200000-81200019 | Msa0379810:intron | 30.0% | |
| ! | TACCATATTTGACTTTGAAG+AGG | + | chr3_1:81200005-81200024 | None:intergenic | 30.0% |
| AAGGGAAGAATTAACAGAAA+AGG | - | chr3_1:81200105-81200124 | Msa0379810:intron | 30.0% | |
| AGATACTCTTACAGATAATG+TGG | - | chr3_1:81200170-81200189 | Msa0379810:intron | 30.0% | |
| ATGCAAAATATGTGGTCATT+TGG | - | chr3_1:81200242-81200261 | Msa0379810:intron | 30.0% | |
| GAAAAACCTAGTACAATTGA+TGG | + | chr3_1:81200640-81200659 | None:intergenic | 30.0% | |
| GGTAATAAAGCAATGTAAGA+GGG | + | chr3_1:81200679-81200698 | None:intergenic | 30.0% | |
| TGGTAATAAAGCAATGTAAG+AGG | + | chr3_1:81200680-81200699 | None:intergenic | 30.0% | |
| TGTGAACAAATTGTTCATTG+AGG | - | chr3_1:81200711-81200730 | Msa0379810:intron | 30.0% | |
| CCATAGACAAAGTAGATAAA+CGG | - | chr3_1:81200950-81200969 | Msa0379810:intron | 30.0% | |
| CATAGACAAAGTAGATAAAC+GGG | - | chr3_1:81200951-81200970 | Msa0379810:intron | 30.0% | |
| ATAGACAAAGTAGATAAACG+GGG | - | chr3_1:81200952-81200971 | Msa0379810:intron | 30.0% | |
| ACAAAAGTAACATATGAGGA+TGG | - | chr3_1:81200977-81200996 | Msa0379810:intron | 30.0% | |
| GTATTTACTTTGTATGACCT+TGG | - | chr3_1:81201033-81201052 | Msa0379810:intron | 30.0% | |
| AATAATTCCAAGACACACAT+AGG | - | chr3_1:81201123-81201142 | Msa0379810:intron | 30.0% | |
| !! | TCTGAAGGATTAATTTGCAA+TGG | + | chr3_1:81201481-81201500 | None:intergenic | 30.0% |
| ATAATCACAAACTTTACCTG+CGG | + | chr3_1:81201514-81201533 | None:intergenic | 30.0% | |
| GGGAAATTATATGTGGAAAA+TGG | - | chr3_1:81201684-81201703 | Msa0379810:intron | 30.0% | |
| ! | TCACTCAAGTTTATTTCTCA+AGG | - | chr3_1:81201851-81201870 | Msa0379810:intron | 30.0% |
| ! | CACTCAAGTTTATTTCTCAA+GGG | - | chr3_1:81201852-81201871 | Msa0379810:intron | 30.0% |
| TATTTCTCAAGGGTTCAATA+AGG | - | chr3_1:81201862-81201881 | Msa0379810:intron | 30.0% | |
| ATTTCTCAAGGGTTCAATAA+GGG | - | chr3_1:81201863-81201882 | Msa0379810:intron | 30.0% | |
| !!! | CTAATTAGCTTTTGCAAAGT+AGG | - | chr3_1:81201893-81201912 | Msa0379810:intron | 30.0% |
| !!! | CTGCATTCTAAATGGTTTTT+TGG | + | chr3_1:81201922-81201941 | None:intergenic | 30.0% |
| ! | TCTTTTTGGATTTGATTCCA+TGG | + | chr3_1:81202142-81202161 | None:intergenic | 30.0% |
| ATTCTCATTATCAACTTAGC+TGG | - | chr3_1:81202169-81202188 | Msa0379810:intron | 30.0% | |
| ATAAAAGATCCTTTACAGGA+AGG | + | chr3_1:81202226-81202245 | None:intergenic | 30.0% | |
| CCTTACAAATCAATTTCGTA+GGG | + | chr3_1:81202497-81202516 | None:intergenic | 30.0% | |
| ACCTTACAAATCAATTTCGT+AGG | + | chr3_1:81202498-81202517 | None:intergenic | 30.0% | |
| !! | GTTCCGTTTCTAAGATATAT+TGG | + | chr3_1:81202567-81202586 | None:intergenic | 30.0% |
| TAGTTAGGAGAAATACGAAA+GGG | + | chr3_1:81202700-81202719 | None:intergenic | 30.0% | |
| TTAGTTAGGAGAAATACGAA+AGG | + | chr3_1:81202701-81202720 | None:intergenic | 30.0% | |
| TCTCCTAACTAACTTTCTTA+AGG | - | chr3_1:81202709-81202728 | Msa0379810:intron | 30.0% | |
| CAACCTTAAGAAAGTTAGTT+AGG | + | chr3_1:81202715-81202734 | None:intergenic | 30.0% | |
| GACAATTTACAGTAGTATTC+AGG | - | chr3_1:81202821-81202840 | Msa0379810:intron | 30.0% | |
| !! | AGCTAAAAAAGGTGTTATAC+GGG | + | chr3_1:81203110-81203129 | None:intergenic | 30.0% |
| ACTGGAAAAGAATAGTACTT+GGG | + | chr3_1:81203408-81203427 | None:intergenic | 30.0% | |
| ! | AATGTTTAGGTTTGTGATGA+AGG | - | chr3_1:81203508-81203527 | Msa0379810:intron | 30.0% |
| TTCAAATCAAAGTAATTGGG+TGG | - | chr3_1:81203549-81203568 | Msa0379810:intron | 30.0% | |
| !!! | GCGAAGTATTTTTAACTTAG+AGG | - | chr3_1:81203664-81203683 | Msa0379810:intron | 30.0% |
| ATGTCATACCACAAGTTATA+CGG | - | chr3_1:81203702-81203721 | Msa0379810:intron | 30.0% | |
| TATTCAAACCGTATAACTTG+TGG | + | chr3_1:81203713-81203732 | None:intergenic | 30.0% | |
| !! | TTCTACGTTGTTTTGTACTA+TGG | + | chr3_1:81203743-81203762 | None:intergenic | 30.0% |
| ! | TTCAAGTTAGATGGTTGAAA+TGG | - | chr3_1:81203788-81203807 | Msa0379810:intron | 30.0% |
| GACTTATAGATTATGTTGCA+AGG | - | chr3_1:81204038-81204057 | Msa0379810:intron | 30.0% | |
| ! | GTCATTCTTTTATCGTAATG+TGG | + | chr3_1:81204202-81204221 | None:intergenic | 30.0% |
| TGTCAAAATTCACCAACAAA+AGG | + | chr3_1:81204298-81204317 | None:intergenic | 30.0% | |
| ATGGAAAGGTCTTTATTACT+TGG | + | chr3_1:81204480-81204499 | None:intergenic | 30.0% | |
| AAGAATTCGAGGAAAACAAT+TGG | + | chr3_1:81204515-81204534 | None:intergenic | 30.0% | |
| TTATATGATAGGTCTTTAGC+GGG | - | chr3_1:81204570-81204589 | Msa0379810:intron | 30.0% | |
| ! | GAATATGAAGGACATTTTGT+AGG | - | chr3_1:81204628-81204647 | Msa0379810:CDS | 30.0% |
| ! | ATATGAAGGACATTTTGTAG+GGG | - | chr3_1:81204630-81204649 | Msa0379810:CDS | 30.0% |
| AAGAAAATATCCACAACAGA+TGG | + | chr3_1:81204709-81204728 | None:intergenic | 30.0% | |
| CAATATTAGATACTGGATTC+TGG | + | chr3_1:81204796-81204815 | None:intergenic | 30.0% | |
| CAGAATCCAGTATCTAATAT+TGG | - | chr3_1:81204794-81204813 | Msa0379810:CDS | 30.0% | |
| CTGTAACCAATATTAGATAC+TGG | + | chr3_1:81204803-81204822 | None:intergenic | 30.0% | |
| ! | CAGTATCTAATATTGGTTAC+AGG | - | chr3_1:81204801-81204820 | Msa0379810:CDS | 30.0% |
| AATTGAAACTTACCAAGAGA+AGG | - | chr3_1:81204853-81204872 | Msa0379810:CDS | 30.0% | |
| AGACAAAGTTCAAATATCCT+TGG | + | chr3_1:81205017-81205036 | None:intergenic | 30.0% | |
| AGTTCAATATATTTCACCTG+AGG | + | chr3_1:81205363-81205382 | None:intergenic | 30.0% | |
| TCATGATATAACAATGATGG+TGG | + | chr3_1:81205540-81205559 | None:intergenic | 30.0% | |
| TGGTCATGATATAACAATGA+TGG | + | chr3_1:81205543-81205562 | None:intergenic | 30.0% | |
| ACAATTGATGTAACCAATTG+GGG | + | chr3_1:81205668-81205687 | None:intergenic | 30.0% | |
| TGCAATTGATGTAACCAATT+GGG | + | chr3_1:81205808-81205827 | None:intergenic | 30.0% | |
| TTGCAATTGATGTAACCAAT+TGG | + | chr3_1:81205809-81205828 | None:intergenic | 30.0% | |
| ! | TTTTGTTACACATACAGTTC+GGG | + | chr3_1:81205888-81205907 | None:intergenic | 30.0% |
| AAATTACACAGGAACAGAAA+AGG | + | chr3_1:81206029-81206048 | None:intergenic | 30.0% | |
| ! | TTTCTTTATTTATTTGCCGC+AGG | - | chr3_1:81206109-81206128 | Msa0379810:intron | 30.0% |
| GCAACTGAAGTATATAGAAA+TGG | - | chr3_1:81206157-81206176 | Msa0379810:intron | 30.0% | |
| ACGGTAAAAAATAGCTTCTA+TGG | + | chr3_1:81206529-81206548 | None:intergenic | 30.0% | |
| GCAAAAATATATCACGATAG+AGG | + | chr3_1:81206580-81206599 | None:intergenic | 30.0% | |
| ! | TTTTACAGTGTGACAGAATA+TGG | - | chr3_1:81206780-81206799 | Msa0379810:intron | 30.0% |
| ! | TGGAACAATATTTTGTGATG+TGG | - | chr3_1:81206800-81206819 | Msa0379810:intron | 30.0% |
| AAGCTATAACCTAAGAAATG+GGG | + | chr3_1:81206841-81206860 | None:intergenic | 30.0% | |
| ! | TTTTGGTAGAAATGATAGCT+TGG | - | chr3_1:81206864-81206883 | Msa0379810:intron | 30.0% |
| TTTGGTAGAAATGATAGCTT+GGG | - | chr3_1:81206865-81206884 | Msa0379810:intron | 30.0% | |
| ATCAGTGATGAATGATGTGT+GGG | + | chr3_1:81197849-81197868 | None:intergenic | 35.0% | |
| AATCAGTGATGAATGATGTG+TGG | + | chr3_1:81197850-81197869 | None:intergenic | 35.0% | |
| ! | TCAAACTTTTCTGATCTCAC+AGG | - | chr3_1:81197882-81197901 | Msa0379810:three_prime_UTR | 35.0% |
| TATTTCAAACCCTAGCGTAA+TGG | - | chr3_1:81197975-81197994 | Msa0379810:three_prime_UTR | 35.0% | |
| TTATGAACACCATTACGCTA+GGG | + | chr3_1:81197987-81198006 | None:intergenic | 35.0% | |
| ! | ATAAAGGATAAGAACGGGTT+TGG | + | chr3_1:81198112-81198131 | None:intergenic | 35.0% |
| CGGTTATAAAGGATAAGAAC+GGG | + | chr3_1:81198117-81198136 | None:intergenic | 35.0% | |
| ATGATGTTGCATTGAATGTG+TGG | - | chr3_1:81198148-81198167 | Msa0379810:exon | 35.0% | |
| GAATGTGTGGTAATACTAGA+CGG | - | chr3_1:81198161-81198180 | Msa0379810:exon | 35.0% | |
| AGACGGTATACGATTAGAAT+TGG | - | chr3_1:81198178-81198197 | Msa0379810:CDS | 35.0% | |
| GACGGTATACGATTAGAATT+GGG | - | chr3_1:81198179-81198198 | Msa0379810:CDS | 35.0% | |
| ACGGTATACGATTAGAATTG+GGG | - | chr3_1:81198180-81198199 | Msa0379810:CDS | 35.0% | |
| AAACTAGACTTAGGTGGTTT+GGG | - | chr3_1:81198230-81198249 | Msa0379810:intron | 35.0% | |
| ATCTTTACTACAGAATCCAC+AGG | + | chr3_1:81198271-81198290 | None:intergenic | 35.0% | |
| ! | TTGATGATAGTCAGATCACT+AGG | - | chr3_1:81198302-81198321 | Msa0379810:intron | 35.0% |
| TGATGATAGTCAGATCACTA+GGG | - | chr3_1:81198303-81198322 | Msa0379810:intron | 35.0% | |
| ATATTCCAACCGAGTATCAA+TGG | - | chr3_1:81198481-81198500 | Msa0379810:intron | 35.0% | |
| GTACGAACATGGAAAATGTT+TGG | - | chr3_1:81198517-81198536 | Msa0379810:intron | 35.0% | |
| AAGGTTTATACACCCATATG+GGG | + | chr3_1:81198549-81198568 | None:intergenic | 35.0% | |
| CAAGGTTTATACACCCATAT+GGG | + | chr3_1:81198550-81198569 | None:intergenic | 35.0% | |
| TCAAGGTTTATACACCCATA+TGG | + | chr3_1:81198551-81198570 | None:intergenic | 35.0% | |
| GATACCTAGAGTGATATGAT+AGG | - | chr3_1:81198581-81198600 | Msa0379810:intron | 35.0% | |
| TCTTCCTATCATATCACTCT+AGG | + | chr3_1:81198588-81198607 | None:intergenic | 35.0% | |
| ATGACTTAGTGAATGAGTGT+TGG | - | chr3_1:81198624-81198643 | Msa0379810:intron | 35.0% | |
| TGACTTAGTGAATGAGTGTT+GGG | - | chr3_1:81198625-81198644 | Msa0379810:intron | 35.0% | |
| CTTCTTCATAGCACCAAATT+TGG | - | chr3_1:81198741-81198760 | Msa0379810:intron | 35.0% | |
| TCTTCTCTAGTAAGCTGATA+TGG | + | chr3_1:81198777-81198796 | None:intergenic | 35.0% | |
| GCAACATTATCTATGGAGTT+TGG | - | chr3_1:81198826-81198845 | Msa0379810:intron | 35.0% | |
| ACTCATACAATACAACTCTG+AGG | - | chr3_1:81199074-81199093 | Msa0379810:intron | 35.0% | |
| ATCCAGTCAACACACTATAA+TGG | + | chr3_1:81199301-81199320 | None:intergenic | 35.0% | |
| AACCAATGGAAGAGGATAAT+AGG | - | chr3_1:81199618-81199637 | Msa0379810:intron | 35.0% | |
| TTCCTATTATCCTCTTCCAT+TGG | + | chr3_1:81199623-81199642 | None:intergenic | 35.0% | |
| !! | CTTAGACAGTTTGAGTTGAA+AGG | + | chr3_1:81199656-81199675 | None:intergenic | 35.0% |
| TGAAAACACTGCACCTAATT+TGG | - | chr3_1:81199712-81199731 | Msa0379810:intron | 35.0% | |
| CATTACTATTAAACTGGAGG+AGG | + | chr3_1:81200077-81200096 | None:intergenic | 35.0% | |
| CTCCTCCAGTTTAATAGTAA+TGG | - | chr3_1:81200075-81200094 | Msa0379810:intron | 35.0% | |
| GTCCATTACTATTAAACTGG+AGG | + | chr3_1:81200080-81200099 | None:intergenic | 35.0% | |
| GGAGTCCATTACTATTAAAC+TGG | + | chr3_1:81200083-81200102 | None:intergenic | 35.0% | |
| !! | TAATAGTAATGGACTCCACA+AGG | - | chr3_1:81200086-81200105 | Msa0379810:intron | 35.0% |
| !! | AATAGTAATGGACTCCACAA+GGG | - | chr3_1:81200087-81200106 | Msa0379810:intron | 35.0% |
| TTCTGTTAATTCTTCCCTTG+TGG | + | chr3_1:81200104-81200123 | None:intergenic | 35.0% | |
| !! | AAAGAGTACCAATTGATGAG+TGG | - | chr3_1:81200340-81200359 | Msa0379810:intron | 35.0% |
| TGACAAAACCACTCATCAAT+TGG | + | chr3_1:81200351-81200370 | None:intergenic | 35.0% | |
| ! | ATCTAGAACTGTCTCAGTTA+AGG | - | chr3_1:81200449-81200468 | Msa0379810:intron | 35.0% |
| TCTCTCAACATCAACAGTAT+GGG | + | chr3_1:81200486-81200505 | None:intergenic | 35.0% | |
| ATCTCTCAACATCAACAGTA+TGG | + | chr3_1:81200487-81200506 | None:intergenic | 35.0% | |
| ! | ACGGAAGTTACCTTTTTACA+GGG | + | chr3_1:81200578-81200597 | None:intergenic | 35.0% |
| ! | AACGGAAGTTACCTTTTTAC+AGG | + | chr3_1:81200579-81200598 | None:intergenic | 35.0% |
| TAAAGCAATGTAAGAGGGAA+GGG | + | chr3_1:81200674-81200693 | None:intergenic | 35.0% | |
| ATAAAGCAATGTAAGAGGGA+AGG | + | chr3_1:81200675-81200694 | None:intergenic | 35.0% | |
| CCGTTTATCTACTTTGTCTA+TGG | + | chr3_1:81200953-81200972 | None:intergenic | 35.0% | |
| TTAGTGCTAATGTGGAATTG+TGG | - | chr3_1:81201001-81201020 | Msa0379810:intron | 35.0% | |
| TATCTAACCTATGTGTGTCT+TGG | + | chr3_1:81201133-81201152 | None:intergenic | 35.0% | |
| AACAATTTCCTTTCCTATCG+AGG | + | chr3_1:81201188-81201207 | None:intergenic | 35.0% | |
| !! | GGATTAATTTGCAATGGTTC+TGG | + | chr3_1:81201475-81201494 | None:intergenic | 35.0% |
| TGCGGTCTATAAATTTCTGA+AGG | + | chr3_1:81201496-81201515 | None:intergenic | 35.0% | |
| TTCAGAAATTTATAGACCGC+AGG | - | chr3_1:81201495-81201514 | Msa0379810:intron | 35.0% | |
| ! | CAATTTTATCCTCAGAGTGA+TGG | - | chr3_1:81201559-81201578 | Msa0379810:intron | 35.0% |
| ! | AAAAAGGCTTTTTGTTCTGC+AGG | - | chr3_1:81201583-81201602 | Msa0379810:intron | 35.0% |
| !!! | TAGTTTTGTCTATAACCTCC+CGG | + | chr3_1:81201664-81201683 | None:intergenic | 35.0% |
| GGAGGTTATAGACAAAACTA+GGG | - | chr3_1:81201664-81201683 | Msa0379810:intron | 35.0% | |
| ATGTCACATGACATTGTTCT+TGG | - | chr3_1:81201714-81201733 | Msa0379810:intron | 35.0% | |
| TGAGATGAAAATCTCACGTA+CGG | + | chr3_1:81202084-81202103 | None:intergenic | 35.0% | |
| ! | CGTGAGATTTTCATCTCATA+CGG | - | chr3_1:81202086-81202105 | Msa0379810:intron | 35.0% |
| CTGTTGAAGTGACTAATTCT+GGG | + | chr3_1:81202321-81202340 | None:intergenic | 35.0% | |
| ACTGTTGAAGTGACTAATTC+TGG | + | chr3_1:81202322-81202341 | None:intergenic | 35.0% | |
| !! | CCCTACGAAATTGATTTGTA+AGG | - | chr3_1:81202494-81202513 | Msa0379810:intron | 35.0% |
| GATCATTTGTGATAGACGTT+GGG | + | chr3_1:81202672-81202691 | None:intergenic | 35.0% | |
| TGATCATTTGTGATAGACGT+TGG | + | chr3_1:81202673-81202692 | None:intergenic | 35.0% | |
| ATCCACATACACCAATAACA+CGG | - | chr3_1:81202983-81203002 | Msa0379810:intron | 35.0% | |
| ATCAAATACTCTGAGTCAGA+GGG | + | chr3_1:81203014-81203033 | None:intergenic | 35.0% | |
| TATCAAATACTCTGAGTCAG+AGG | + | chr3_1:81203015-81203034 | None:intergenic | 35.0% | |
| CAATCACTGTGAATGTAGTT+TGG | + | chr3_1:81203081-81203100 | None:intergenic | 35.0% | |
| TTAATACACGGAGAACTTGA+AGG | + | chr3_1:81203194-81203213 | None:intergenic | 35.0% | |
| ! | TTCAAGTTCTCCGTGTATTA+AGG | - | chr3_1:81203193-81203212 | Msa0379810:CDS | 35.0% |
| TCCTAGCAGCTAATTGTAAT+CGG | + | chr3_1:81203247-81203266 | None:intergenic | 35.0% | |
| ATACAGTAAAATACAACGCC+TGG | + | chr3_1:81203332-81203351 | None:intergenic | 35.0% | |
| CCAAATGGAAAGAAACTAGT+AGG | + | chr3_1:81203371-81203390 | None:intergenic | 35.0% | |
| ! | CCTACTAGTTTCTTTCCATT+TGG | - | chr3_1:81203368-81203387 | Msa0379810:intron | 35.0% |
| TGGAAAAGAATAGTACTTGG+GGG | + | chr3_1:81203406-81203425 | None:intergenic | 35.0% | |
| CTGGAAAAGAATAGTACTTG+GGG | + | chr3_1:81203407-81203426 | None:intergenic | 35.0% | |
| CACTGGAAAAGAATAGTACT+TGG | + | chr3_1:81203409-81203428 | None:intergenic | 35.0% | |
| TGCTTCAATTTCCAAATCCA+TGG | - | chr3_1:81203427-81203446 | Msa0379810:intron | 35.0% | |
| TACATCTTCCAATTGCTCTT+AGG | + | chr3_1:81203602-81203621 | None:intergenic | 35.0% | |
| TAAGAGCAATTGGAAGATGT+AGG | - | chr3_1:81203601-81203620 | Msa0379810:intron | 35.0% | |
| ! | ACCATCGAATTCAAGTTAGA+TGG | - | chr3_1:81203779-81203798 | Msa0379810:intron | 35.0% |
| ACCATCTAACTTGAATTCGA+TGG | + | chr3_1:81203783-81203802 | None:intergenic | 35.0% | |
| TGAATCATATAAAACACCGG+TGG | + | chr3_1:81203821-81203840 | None:intergenic | 35.0% | |
| !! | AGAAGTATTGCTCAAACTGA+GGG | - | chr3_1:81203840-81203859 | Msa0379810:intron | 35.0% |
| TAAGATTGGCGATGTTGTAT+GGG | - | chr3_1:81203884-81203903 | Msa0379810:intron | 35.0% | |
| AAACTCGACATAGATGGTTT+GGG | - | chr3_1:81204002-81204021 | Msa0379810:intron | 35.0% | |
| AAGGCTAGTAGATAAGATGA+AGG | - | chr3_1:81204057-81204076 | Msa0379810:intron | 35.0% | |
| AAGGATAGTCAAATCACTAG+AGG | - | chr3_1:81204076-81204095 | Msa0379810:intron | 35.0% | |
| TTGTTGTAGCTGAGAAGATT+TGG | - | chr3_1:81204437-81204456 | Msa0379810:intron | 35.0% | |
| CAATTGGAAATGCTAGAGAA+TGG | + | chr3_1:81204499-81204518 | None:intergenic | 35.0% | |
| !!! | TTTTTCAGGACAAGAATTCG+AGG | + | chr3_1:81204526-81204545 | None:intergenic | 35.0% |
| ! | TGACAATGCTTGTGTTTTTC+AGG | + | chr3_1:81204540-81204559 | None:intergenic | 35.0% |
| ! | CGGGTTTTTGTAGGAAAATT+AGG | - | chr3_1:81204589-81204608 | Msa0379810:CDS | 35.0% |
| TTGTAGGAAAATTAGGCTAG+TGG | - | chr3_1:81204596-81204615 | Msa0379810:CDS | 35.0% | |
| ! | AATTAGGCTAGTGGACAATA+TGG | - | chr3_1:81204605-81204624 | Msa0379810:CDS | 35.0% |
| ! | ATTAGGCTAGTGGACAATAT+GGG | - | chr3_1:81204606-81204625 | Msa0379810:CDS | 35.0% |
| TGGACAATATGGGAATATGA+AGG | - | chr3_1:81204616-81204635 | Msa0379810:CDS | 35.0% | |
| TATAAGGATTCCATCTGTTG+TGG | - | chr3_1:81204696-81204715 | Msa0379810:CDS | 35.0% | |
| ! | GTGGATATTTTCTTGTTGCT+AGG | - | chr3_1:81204715-81204734 | Msa0379810:CDS | 35.0% |
| ! | ATTTTCTTGTTGCTAGGACA+AGG | - | chr3_1:81204721-81204740 | Msa0379810:CDS | 35.0% |
| TTTACATTTCCACCTTCTCT+TGG | + | chr3_1:81204868-81204887 | None:intergenic | 35.0% | |
| AGAAGGTGGAAATGTAAACA+TGG | - | chr3_1:81204870-81204889 | Msa0379810:CDS | 35.0% | |
| !!! | ACTTTTTAGAACTGTTGCCA+AGG | - | chr3_1:81204997-81205016 | Msa0379810:CDS | 35.0% |
| ! | TCGGTTTGAACTTCAAATAG+TGG | + | chr3_1:81205282-81205301 | None:intergenic | 35.0% |
| ! | GAGGAACTTCTTTTTCTCTT+GGG | + | chr3_1:81205488-81205507 | None:intergenic | 35.0% |
| ! | AGAGGAACTTCTTTTTCTCT+TGG | + | chr3_1:81205489-81205508 | None:intergenic | 35.0% |
| ATTGCGAGAATCGTAAAAAG+AGG | + | chr3_1:81205507-81205526 | None:intergenic | 35.0% | |
| !! | AATTTAATTGGAGGGTGTCT+TGG | + | chr3_1:81205563-81205582 | None:intergenic | 35.0% |
| CAATTGATGTAACCAATTGG+GGG | + | chr3_1:81205667-81205686 | None:intergenic | 35.0% | |
| CAATTGATGTAACCAATTGG+GGG | + | chr3_1:81205667-81205686 | None:intergenic | 35.0% | |
| GCAATTGATGTAACCAATTG+GGG | + | chr3_1:81205807-81205826 | None:intergenic | 35.0% | |
| CTTACTAGTCAATGATCTTG+TGG | - | chr3_1:81206200-81206219 | Msa0379810:intron | 35.0% | |
| ATCCTATAAAAAGCCTTGGT+GGG | + | chr3_1:81206385-81206404 | None:intergenic | 35.0% | |
| GTTGATCCTATAAAAAGCCT+TGG | + | chr3_1:81206389-81206408 | None:intergenic | 35.0% | |
| ! | TTTCTAGGAACATTGGAATG+TGG | - | chr3_1:81206422-81206441 | Msa0379810:intron | 35.0% |
| GACATGGAACACATACAATA+TGG | + | chr3_1:81206743-81206762 | None:intergenic | 35.0% | |
| CTGTAAAAACAAAATGCCAC+TGG | + | chr3_1:81206768-81206787 | None:intergenic | 35.0% | |
| AGATTTCATCCCCATTTCTT+AGG | - | chr3_1:81206829-81206848 | Msa0379810:intron | 35.0% | |
| TTGGTAGAAATGATAGCTTG+GGG | - | chr3_1:81206866-81206885 | Msa0379810:intron | 35.0% | |
| CATCAATTGGGTAATGTTGA+AGG | + | chr3_1:81206923-81206942 | None:intergenic | 35.0% | |
| TTCAAAATACACACTCCCAC+CGG | - | chr3_1:81197759-81197778 | Msa0379810:three_prime_UTR | 40.0% | |
| ! | GATTCAAGTCTTTTTCCGGT+GGG | + | chr3_1:81197777-81197796 | None:intergenic | 40.0% |
| ! | AGAACGAAGGGGTTTTTGTT+AGG | + | chr3_1:81197811-81197830 | None:intergenic | 40.0% |
| GTTATGAACACCATTACGCT+AGG | + | chr3_1:81197988-81198007 | None:intergenic | 40.0% | |
| !! | TGGTTTGTTCCCTCTCTATT+AGG | - | chr3_1:81198030-81198049 | Msa0379810:three_prime_UTR | 40.0% |
| GTTCCCTCTCTATTAGGATT+AGG | - | chr3_1:81198036-81198055 | Msa0379810:three_prime_UTR | 40.0% | |
| CATGTCTGCTACGGTTATAA+AGG | + | chr3_1:81198128-81198147 | None:intergenic | 40.0% | |
| CAACATCATCATGTCTGCTA+CGG | + | chr3_1:81198137-81198156 | None:intergenic | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | - | chr3_1:81198229-81198248 | Msa0379810:intron | 40.0% | |
| GATGATAGTCAGATCACTAG+GGG | - | chr3_1:81198304-81198323 | Msa0379810:intron | 40.0% | |
| ! | AAGCCTTATCTCACAAAGTG+GGG | + | chr3_1:81198425-81198444 | None:intergenic | 40.0% |
| ! | CAAGCCTTATCTCACAAAGT+GGG | + | chr3_1:81198426-81198445 | None:intergenic | 40.0% |
| TGCATTGAGCCATTGATACT+CGG | + | chr3_1:81198493-81198512 | None:intergenic | 40.0% | |
| CGAACATGGAAAATGTTTGG+CGG | - | chr3_1:81198520-81198539 | Msa0379810:intron | 40.0% | |
| AGGTATCTCTTTCTCTCTCA+AGG | + | chr3_1:81198568-81198587 | None:intergenic | 40.0% | |
| ! | GACTTAGTGAATGAGTGTTG+GGG | - | chr3_1:81198626-81198645 | Msa0379810:intron | 40.0% |
| !! | AATGAGTGTTGGGGAATGTA+GGG | - | chr3_1:81198635-81198654 | Msa0379810:intron | 40.0% |
| TCATTGCAACTTAGCCAGTA+TGG | - | chr3_1:81199016-81199035 | Msa0379810:intron | 40.0% | |
| AGGTTATGCTCTTACCATAC+TGG | + | chr3_1:81199033-81199052 | None:intergenic | 40.0% | |
| CTTCTTAGTTCAGTTGAAGC+TGG | - | chr3_1:81199476-81199495 | Msa0379810:CDS | 40.0% | |
| ! | GGAAAGATTTTCAACGTGAC+CGG | - | chr3_1:81199522-81199541 | Msa0379810:CDS | 40.0% |
| GTGTAGAAAAGCTGAACCAA+TGG | - | chr3_1:81199604-81199623 | Msa0379810:intron | 40.0% | |
| AAAAGCTGAACCAATGGAAG+AGG | - | chr3_1:81199610-81199629 | Msa0379810:intron | 40.0% | |
| TCAAACTGTCTAAGAAGCTG+TGG | - | chr3_1:81199662-81199681 | Msa0379810:intron | 40.0% | |
| GTCATTATGCTTGCAGTTGA+TGG | + | chr3_1:81199692-81199711 | None:intergenic | 40.0% | |
| CTGCACCTAATTTGGTATAC+AGG | - | chr3_1:81199720-81199739 | Msa0379810:intron | 40.0% | |
| TAACTGGAAAAGCAGCTGTT+TGG | + | chr3_1:81199868-81199887 | None:intergenic | 40.0% | |
| ACTCCATCAAGAAAGACAGA+AGG | + | chr3_1:81199926-81199945 | None:intergenic | 40.0% | |
| AGATTCCATAGCAACTGAGA+TGG | - | chr3_1:81200033-81200052 | Msa0379810:intron | 40.0% | |
| AAAAGCCATGGACTTCTTAG+AGG | - | chr3_1:81200147-81200166 | Msa0379810:intron | 40.0% | |
| ! | TATCTCCTCTAAGAAGTCCA+TGG | + | chr3_1:81200155-81200174 | None:intergenic | 40.0% |
| GCAGTTATTAACGGTGGTAA+CGG | + | chr3_1:81200211-81200230 | None:intergenic | 40.0% | |
| CCTGGAACAGCAGTTATTAA+CGG | + | chr3_1:81200220-81200239 | None:intergenic | 40.0% | |
| TCCAGGTCATGCAAAATATG+TGG | - | chr3_1:81200234-81200253 | Msa0379810:intron | 40.0% | |
| ! | ACCACATATTTTGCATGACC+TGG | + | chr3_1:81200238-81200257 | None:intergenic | 40.0% |
| AAACGTGCATTGTAGCAAGA+TGG | + | chr3_1:81200318-81200337 | None:intergenic | 40.0% | |
| CACGTATCAACAGTGGAATA+GGG | - | chr3_1:81200424-81200443 | Msa0379810:intron | 40.0% | |
| !! | GATGGGTGTCATACAGATTT+TGG | + | chr3_1:81200622-81200641 | None:intergenic | 40.0% |
| TGACACCCATCAATTGTACT+AGG | - | chr3_1:81200631-81200650 | Msa0379810:intron | 40.0% | |
| TCTCTACAACGAATAGCATC+TGG | + | chr3_1:81200749-81200768 | None:intergenic | 40.0% | |
| GGCGACAAAAGTAACATATG+AGG | - | chr3_1:81200973-81200992 | Msa0379810:intron | 40.0% | |
| AGGATGGTTTAGTGCTAATG+TGG | - | chr3_1:81200993-81201012 | Msa0379810:intron | 40.0% | |
| GACCTTGGTCAACAAATTCA+TGG | - | chr3_1:81201048-81201067 | Msa0379810:intron | 40.0% | |
| !! | GTCCATGAATTTGTTGACCA+AGG | + | chr3_1:81201053-81201072 | None:intergenic | 40.0% |
| ! | TCCTCAGAGTGATGGAAAAA+AGG | - | chr3_1:81201567-81201586 | Msa0379810:intron | 40.0% |
| GGGAGGTTATAGACAAAACT+AGG | - | chr3_1:81201663-81201682 | Msa0379810:intron | 40.0% | |
| TTATATGTGGAAAATGGCGC+AGG | - | chr3_1:81201690-81201709 | Msa0379810:intron | 40.0% | |
| ! | GATAAAGCATCTGAGTCAGA+TGG | - | chr3_1:81201946-81201965 | Msa0379810:intron | 40.0% |
| AATAACCGGCATTCAGCAAT+AGG | + | chr3_1:81201976-81201995 | None:intergenic | 40.0% | |
| ! | ATTGCTGAATGCCGGTTATT+AGG | - | chr3_1:81201976-81201995 | Msa0379810:intron | 40.0% |
| ! | TTGCTGAATGCCGGTTATTA+GGG | - | chr3_1:81201977-81201996 | Msa0379810:intron | 40.0% |
| AAGATCCTTTACAGGAAGGT+TGG | + | chr3_1:81202222-81202241 | None:intergenic | 40.0% | |
| AACAGTCTTCAGCAGGATTT+GGG | - | chr3_1:81202336-81202355 | Msa0379810:intron | 40.0% | |
| GAAAGAATATGAGAGTTCCC+TGG | - | chr3_1:81202618-81202637 | Msa0379810:intron | 40.0% | |
| !! | TTGGGCTTTTTGGCATTAAG+AGG | + | chr3_1:81202654-81202673 | None:intergenic | 40.0% |
| TTGCGAAGAATCAAAAGGAG+AGG | - | chr3_1:81202760-81202779 | Msa0379810:intron | 40.0% | |
| TGACAAGTGACGATTAAGAG+GGG | + | chr3_1:81202953-81202972 | None:intergenic | 40.0% | |
| GTGACAAGTGACGATTAAGA+GGG | + | chr3_1:81202954-81202973 | None:intergenic | 40.0% | |
| AGTGACAAGTGACGATTAAG+AGG | + | chr3_1:81202955-81202974 | None:intergenic | 40.0% | |
| ! | AACCGTGTTATTGGTGTATG+TGG | + | chr3_1:81202988-81203007 | None:intergenic | 40.0% |
| TAAATAGAGCATGGCCTCTT+TGG | - | chr3_1:81203033-81203052 | Msa0379810:intron | 40.0% | |
| CTCTTCAAACAAAGCCAAAG+AGG | + | chr3_1:81203050-81203069 | None:intergenic | 40.0% | |
| CACTATGTTCACCATATCCA+GGG | - | chr3_1:81203148-81203167 | Msa0379810:CDS | 40.0% | |
| ACTATGTTCACCATATCCAG+GGG | - | chr3_1:81203149-81203168 | Msa0379810:CDS | 40.0% | |
| TCCGATTACAATTAGCTGCT+AGG | - | chr3_1:81203243-81203262 | Msa0379810:intron | 40.0% | |
| !!! | GTTTTCAAGTAATCCACTCC+AGG | - | chr3_1:81203311-81203330 | Msa0379810:intron | 40.0% |
| GAAAGAAACTAGTAGGATGC+AGG | + | chr3_1:81203364-81203383 | None:intergenic | 40.0% | |
| AAAGAATAGTACTTGGGGGT+TGG | + | chr3_1:81203402-81203421 | None:intergenic | 40.0% | |
| GGATTTGGAAATTGAAGCAC+TGG | + | chr3_1:81203426-81203445 | None:intergenic | 40.0% | |
| ATGGAAACAAGCCATGGATT+TGG | + | chr3_1:81203441-81203460 | None:intergenic | 40.0% | |
| ! | AAGCATTGTCTGACAGGAAA+TGG | + | chr3_1:81203460-81203479 | None:intergenic | 40.0% |
| !! | TTTCTGAAGCATTGTCTGAC+AGG | + | chr3_1:81203466-81203485 | None:intergenic | 40.0% |
| AGACAATGCTTCAGAAAGAG+AGG | - | chr3_1:81203469-81203488 | Msa0379810:intron | 40.0% | |
| AATGCTTCAGAAAGAGAGGT+AGG | - | chr3_1:81203473-81203492 | Msa0379810:intron | 40.0% | |
| ! | AAAGTAATTGGGTGGCTTGT+TGG | - | chr3_1:81203557-81203576 | Msa0379810:intron | 40.0% |
| GCATCTTTCCTAAGAGCAAT+TGG | - | chr3_1:81203591-81203610 | Msa0379810:intron | 40.0% | |
| TAGATGGTTGAAATGGAGCA+AGG | - | chr3_1:81203795-81203814 | Msa0379810:intron | 40.0% | |
| !! | CAGAAGTATTGCTCAAACTG+AGG | - | chr3_1:81203839-81203858 | Msa0379810:intron | 40.0% |
| !! | GAAGTATTGCTCAAACTGAG+GGG | - | chr3_1:81203841-81203860 | Msa0379810:intron | 40.0% |
| GTAAGATTGGCGATGTTGTA+TGG | - | chr3_1:81203883-81203902 | Msa0379810:intron | 40.0% | |
| !!! | CGCTTATTTTATTCCCGTGT+CGG | + | chr3_1:81203920-81203939 | None:intergenic | 40.0% |
| AAGACTTAGAGAGAGAGAGT+TGG | - | chr3_1:81203947-81203966 | Msa0379810:intron | 40.0% | |
| AGACTTAGAGAGAGAGAGTT+GGG | - | chr3_1:81203948-81203967 | Msa0379810:intron | 40.0% | |
| ! | ACCATCTTTTCGAAGATAGG+TGG | + | chr3_1:81203980-81203999 | None:intergenic | 40.0% |
| ACCTATCTTCGAAAAGATGG+TGG | - | chr3_1:81203979-81203998 | Msa0379810:intron | 40.0% | |
| ! | TCCACCATCTTTTCGAAGAT+AGG | + | chr3_1:81203983-81204002 | None:intergenic | 40.0% |
| GAAACTCGACATAGATGGTT+TGG | - | chr3_1:81204001-81204020 | Msa0379810:intron | 40.0% | |
| AGTCAAATCACTAGAGGTAG+AGG | - | chr3_1:81204082-81204101 | Msa0379810:intron | 40.0% | |
| ! | AAAGACACACCAAAGTATCC+TGG | - | chr3_1:81204155-81204174 | Msa0379810:intron | 40.0% |
| ! | AAGACACACCAAAGTATCCT+GGG | - | chr3_1:81204156-81204175 | Msa0379810:intron | 40.0% |
| AAGAATGACAGAACCTCCAA+CGG | - | chr3_1:81204213-81204232 | Msa0379810:intron | 40.0% | |
| TCAGCTACAACAACTCAGTT+TGG | + | chr3_1:81204430-81204449 | None:intergenic | 40.0% | |
| TTGTAGCTGAGAAGATTTGG+TGG | - | chr3_1:81204440-81204459 | Msa0379810:intron | 40.0% | |
| !! | GAAGATTTGGTGGTTGATTC+TGG | - | chr3_1:81204450-81204469 | Msa0379810:intron | 40.0% |
| GGAAATGCTAGAGAATGGAA+AGG | + | chr3_1:81204494-81204513 | None:intergenic | 40.0% | |
| ! | AAGGACATTTTGTAGGGGTA+TGG | - | chr3_1:81204635-81204654 | Msa0379810:CDS | 40.0% |
| CTTATAACTGCAACAGGTCA+AGG | + | chr3_1:81204682-81204701 | None:intergenic | 40.0% | |
| CTTGACCTGTTGCAGTTATA+AGG | - | chr3_1:81204680-81204699 | Msa0379810:CDS | 40.0% | |
| GGAATCCTTATAACTGCAAC+AGG | + | chr3_1:81204688-81204707 | None:intergenic | 40.0% | |
| TGTATAAGTGGAGAAGTCTG+TGG | - | chr3_1:81204744-81204763 | Msa0379810:CDS | 40.0% | |
| GTATAAGTGGAGAAGTCTGT+GGG | - | chr3_1:81204745-81204764 | Msa0379810:CDS | 40.0% | |
| TGAAACTTACCAAGAGAAGG+TGG | - | chr3_1:81204856-81204875 | Msa0379810:CDS | 40.0% | |
| TTGAAGTTCAAACCGATGAC+TGG | - | chr3_1:81205286-81205305 | Msa0379810:CDS | 40.0% | |
| TGAAGTTCAAACCGATGACT+GGG | - | chr3_1:81205287-81205306 | Msa0379810:CDS | 40.0% | |
| ! | AGTGCTTCTGTGCTTTTCAT+TGG | - | chr3_1:81205310-81205329 | Msa0379810:CDS | 40.0% |
| ! | GTGCTTCTGTGCTTTTCATT+GGG | - | chr3_1:81205311-81205330 | Msa0379810:CDS | 40.0% |
| GACTTAGAGTGAAGAGTTGA+AGG | - | chr3_1:81205397-81205416 | Msa0379810:intron | 40.0% | |
| GTCACTATTGTAATGAGCCT+AGG | + | chr3_1:81205452-81205471 | None:intergenic | 40.0% | |
| ! | ACTTCTTTTTCTCTTGGGAG+TGG | + | chr3_1:81205483-81205502 | None:intergenic | 40.0% |
| !! | GATATAACAATGATGGTGGC+CGG | + | chr3_1:81205536-81205555 | None:intergenic | 40.0% |
| AGCTCAATTAAGTGGCTACA+TGG | + | chr3_1:81205621-81205640 | None:intergenic | 40.0% | |
| TAGCCACTTAATTGAGCTTG+CGG | - | chr3_1:81205623-81205642 | Msa0379810:intron | 40.0% | |
| GAACAAGGTGAGCTGTTTAT+AGG | + | chr3_1:81205733-81205752 | None:intergenic | 40.0% | |
| ATCTACCAAATCCTGTCGAT+GGG | + | chr3_1:81205978-81205997 | None:intergenic | 40.0% | |
| AATCTACCAAATCCTGTCGA+TGG | + | chr3_1:81205979-81205998 | None:intergenic | 40.0% | |
| ! | TCGACAGGATTTGGTAGATT+TGG | - | chr3_1:81205979-81205998 | Msa0379810:intron | 40.0% |
| ! | CTTTATTTATTTGCCGCAGG+AGG | - | chr3_1:81206112-81206131 | Msa0379810:intron | 40.0% |
| ! | AAGCCTTATCCCACTATGTA+GGG | + | chr3_1:81206343-81206362 | None:intergenic | 40.0% |
| GATCCTATAAAAAGCCTTGG+TGG | + | chr3_1:81206386-81206405 | None:intergenic | 40.0% | |
| ACTATTTGTAGCCTGTAGGT+AGG | - | chr3_1:81206445-81206464 | Msa0379810:intron | 40.0% | |
| GGCAATTGAAGAATCCATAG+TGG | - | chr3_1:81206666-81206685 | Msa0379810:intron | 40.0% | |
| ATCCATAGTGGTGAGAATTC+TGG | - | chr3_1:81206678-81206697 | Msa0379810:intron | 40.0% | |
| ATCCAGAATTCTCACCACTA+TGG | + | chr3_1:81206683-81206702 | None:intergenic | 40.0% | |
| CAATATGGCTTTCTCTGACA+AGG | + | chr3_1:81206728-81206747 | None:intergenic | 40.0% | |
| TGGTAGAAATGATAGCTTGG+GGG | - | chr3_1:81206867-81206886 | Msa0379810:intron | 40.0% | |
| !! | GGTCATTTTGCCTATCATGA+GGG | - | chr3_1:81206888-81206907 | Msa0379810:intron | 40.0% |
| CTGAATATACGACCGACATA+AGG | + | chr3_1:81207062-81207081 | None:intergenic | 40.0% | |
| ! | CGATTCAAGTCTTTTTCCGG+TGG | + | chr3_1:81197778-81197797 | None:intergenic | 45.0% |
| ! | CGGCGATTCAAGTCTTTTTC+CGG | + | chr3_1:81197781-81197800 | None:intergenic | 45.0% |
| AGAGACTCAAGAGAACGAAG+GGG | + | chr3_1:81197822-81197841 | None:intergenic | 45.0% | |
| CAGAGACTCAAGAGAACGAA+GGG | + | chr3_1:81197823-81197842 | None:intergenic | 45.0% | |
| ACCTGTAGTAGAAAAGACGG+TGG | - | chr3_1:81198207-81198226 | Msa0379810:intron | 45.0% | |
| ! | TCCACCGTCTTTTCTACTAC+AGG | + | chr3_1:81198211-81198230 | None:intergenic | 45.0% |
| AGACGGTGGAAACTAGACTT+AGG | - | chr3_1:81198221-81198240 | Msa0379810:intron | 45.0% | |
| GCATATAGAGAGAAGACCTG+TGG | - | chr3_1:81198252-81198271 | Msa0379810:intron | 45.0% | |
| AGTCAGATCACTAGGGGAAT+AGG | - | chr3_1:81198310-81198329 | Msa0379810:intron | 45.0% | |
| CTTATCTCACAAAGTGGGGT+CGG | + | chr3_1:81198421-81198440 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCTCACAAAG+TGG | + | chr3_1:81198427-81198446 | None:intergenic | 45.0% |
| CCACTTTGTGAGATAAGGCT+TGG | - | chr3_1:81198424-81198443 | Msa0379810:intron | 45.0% | |
| TTGAGCCATTGATACTCGGT+TGG | + | chr3_1:81198489-81198508 | None:intergenic | 45.0% | |
| GAGTATCAATGGCTCAATGC+AGG | - | chr3_1:81198492-81198511 | Msa0379810:intron | 45.0% | |
| !! | GAATGAGTGTTGGGGAATGT+AGG | - | chr3_1:81198634-81198653 | Msa0379810:intron | 45.0% |
| ! | GGCCATTATAGTGTGTTGAC+TGG | - | chr3_1:81199296-81199315 | Msa0379810:intron | 45.0% |
| AAGTTTCACCACTAGGCATC+CGG | + | chr3_1:81199544-81199563 | None:intergenic | 45.0% | |
| ACCTGACAAGTTTCACCACT+AGG | + | chr3_1:81199551-81199570 | None:intergenic | 45.0% | |
| ! | CTTTTCTACACCAGTCAGCA+GGG | + | chr3_1:81199595-81199614 | None:intergenic | 45.0% |
| AGGAGAAAAAAGCTACGCGA+GGG | - | chr3_1:81199740-81199759 | Msa0379810:intron | 45.0% | |
| ATTGGCACTTGTCTGCACAT+CGG | + | chr3_1:81199798-81199817 | None:intergenic | 45.0% | |
| AGCTGATGACAAGTGCAAAG+AGG | + | chr3_1:81199840-81199859 | None:intergenic | 45.0% | |
| TTTGCACTTGTCATCAGCTG+AGG | - | chr3_1:81199841-81199860 | Msa0379810:intron | 45.0% | |
| AGAAAGACAGAAGGCAGAGT+AGG | + | chr3_1:81199917-81199936 | None:intergenic | 45.0% | |
| CTGCCTTCTGTCTTTCTTGA+TGG | - | chr3_1:81199920-81199939 | Msa0379810:intron | 45.0% | |
| GTCATCCATCTCAGTTGCTA+TGG | + | chr3_1:81200041-81200060 | None:intergenic | 45.0% | |
| GGAACAGCAGTTATTAACGG+TGG | + | chr3_1:81200217-81200236 | None:intergenic | 45.0% | |
| CCGTTAATAACTGCTGTTCC+AGG | - | chr3_1:81200217-81200236 | Msa0379810:intron | 45.0% | |
| AAACCACCACGTATCAACAG+TGG | - | chr3_1:81200417-81200436 | Msa0379810:intron | 45.0% | |
| ATTCCACTGTTGATACGTGG+TGG | + | chr3_1:81200423-81200442 | None:intergenic | 45.0% | |
| CCTATTCCACTGTTGATACG+TGG | + | chr3_1:81200426-81200445 | None:intergenic | 45.0% | |
| CCACGTATCAACAGTGGAAT+AGG | - | chr3_1:81200423-81200442 | Msa0379810:intron | 45.0% | |
| GATACTGAGCCATATACGAC+TGG | - | chr3_1:81200504-81200523 | Msa0379810:intron | 45.0% | |
| TATACAAGGTCAGCCTCGAT+AGG | - | chr3_1:81201172-81201191 | Msa0379810:intron | 45.0% | |
| !!! | GCCTTTTTTCCATCACTCTG+AGG | + | chr3_1:81201571-81201590 | None:intergenic | 45.0% |
| CCAATGGAACTGAGTCTAGT+TGG | + | chr3_1:81201626-81201645 | None:intergenic | 45.0% | |
| CCAACTAGACTCAGTTCCAT+TGG | - | chr3_1:81201623-81201642 | Msa0379810:intron | 45.0% | |
| TCTCAAGGGTTCAATAAGGG+CGG | - | chr3_1:81201866-81201885 | Msa0379810:intron | 45.0% | |
| GTTCTCCTATTGCTGAATGC+CGG | - | chr3_1:81201968-81201987 | Msa0379810:intron | 45.0% | |
| !! | ATGACGAACGTAACGGATGT+CGG | + | chr3_1:81202034-81202053 | None:intergenic | 45.0% |
| CATCCGTTACGTTCGTCATT+CGG | - | chr3_1:81202035-81202054 | Msa0379810:intron | 45.0% | |
| GAACCGAATGACGAACGTAA+CGG | + | chr3_1:81202041-81202060 | None:intergenic | 45.0% | |
| GAAAATCTCACGTACGGTTC+TGG | + | chr3_1:81202078-81202097 | None:intergenic | 45.0% | |
| TCTAGCCAACCTTCCTGTAA+AGG | - | chr3_1:81202214-81202233 | Msa0379810:intron | 45.0% | |
| TGGGAAATTTAGCAGCGTTG+AGG | + | chr3_1:81202302-81202321 | None:intergenic | 45.0% | |
| TCACTTCAACAGTCTTCAGC+AGG | - | chr3_1:81202329-81202348 | Msa0379810:intron | 45.0% | |
| CAACAGTCTTCAGCAGGATT+TGG | - | chr3_1:81202335-81202354 | Msa0379810:intron | 45.0% | |
| ! | GTGATAGACGTTGGGCTTTT+TGG | + | chr3_1:81202664-81202683 | None:intergenic | 45.0% |
| AGAGGGAGTAACCGTGTTAT+TGG | + | chr3_1:81202997-81203016 | None:intergenic | 45.0% | |
| GCACTATGTTCACCATATCC+AGG | - | chr3_1:81203147-81203166 | Msa0379810:CDS | 45.0% | |
| TATTTACATGGAACTGCCCC+TGG | + | chr3_1:81203168-81203187 | None:intergenic | 45.0% | |
| GTAAAATACAACGCCTGGAG+TGG | + | chr3_1:81203327-81203346 | None:intergenic | 45.0% | |
| GAAACTAGTAGGATGCAGGT+GGG | + | chr3_1:81203360-81203379 | None:intergenic | 45.0% | |
| AGAAACTAGTAGGATGCAGG+TGG | + | chr3_1:81203361-81203380 | None:intergenic | 45.0% | |
| !! | GGGTTGGTATCTCTACCAAA+TGG | + | chr3_1:81203386-81203405 | None:intergenic | 45.0% |
| CAGGAAATGGAAACAAGCCA+TGG | + | chr3_1:81203447-81203466 | None:intergenic | 45.0% | |
| GTTTGTGATGAAGGCTGTGT+AGG | - | chr3_1:81203517-81203536 | Msa0379810:intron | 45.0% | |
| AGATGTAGGCCCTCATAAAG+TGG | - | chr3_1:81203615-81203634 | Msa0379810:intron | 45.0% | |
| GACTTAGAGAGAGAGAGTTG+GGG | - | chr3_1:81203949-81203968 | Msa0379810:intron | 45.0% | |
| GCCACCTATCTTCGAAAAGA+TGG | - | chr3_1:81203976-81203995 | Msa0379810:intron | 45.0% | |
| TGGTGGAAACTCGACATAGA+TGG | - | chr3_1:81203996-81204015 | Msa0379810:intron | 45.0% | |
| ! | ACCAAAGTATCCTGGGAACA+AGG | - | chr3_1:81204163-81204182 | Msa0379810:intron | 45.0% |
| ACCTTGTTCCCAGGATACTT+TGG | + | chr3_1:81204167-81204186 | None:intergenic | 45.0% | |
| !! | AACCTCCAACGGACTTTTTG+AGG | - | chr3_1:81204224-81204243 | Msa0379810:intron | 45.0% |
| ACTTGCCTCAAAAAGTCCGT+TGG | + | chr3_1:81204232-81204251 | None:intergenic | 45.0% | |
| ! | GCAGTCAGAAAGCCTTTTGT+TGG | - | chr3_1:81204283-81204302 | Msa0379810:CDS | 45.0% |
| !!! | GGTCTTTAGCGGGTTTTTGT+AGG | - | chr3_1:81204580-81204599 | Msa0379810:intron | 45.0% |
| GCTAGGACAAGGTGTATAAG+TGG | - | chr3_1:81204732-81204751 | Msa0379810:CDS | 45.0% | |
| !! | TAAGGGTGTCATGCAGTCAT+TGG | - | chr3_1:81204768-81204787 | Msa0379810:CDS | 45.0% |
| ! | AACTTCAAATAGTGGAGCCC+TGG | + | chr3_1:81205274-81205293 | None:intergenic | 45.0% |
| ACAGCACAATCAGCATGAGA+TGG | + | chr3_1:81205339-81205358 | None:intergenic | 45.0% | |
| AAACTGATGAAGCAGAGCCT+AGG | - | chr3_1:81205432-81205451 | Msa0379810:intron | 45.0% | |
| CGATTCTCGCAATACATGAC+CGG | - | chr3_1:81205514-81205533 | Msa0379810:intron | 45.0% | |
| TGGCTACATGGAGTTGTACA+AGG | + | chr3_1:81205609-81205628 | None:intergenic | 45.0% | |
| AGCCACTTAATTGAGCTTGC+GGG | - | chr3_1:81205624-81205643 | Msa0379810:intron | 45.0% | |
| TTAGAGTCAACACCCCCAAT+TGG | - | chr3_1:81205652-81205671 | Msa0379810:intron | 45.0% | |
| TGGCTACATGGAGTTGAACA+AGG | + | chr3_1:81205748-81205767 | None:intergenic | 45.0% | |
| AGCTCAATTGTGTGGCTACA+TGG | + | chr3_1:81205760-81205779 | None:intergenic | 45.0% | |
| TAGCCACACAATTGAGCTTG+CGG | - | chr3_1:81205762-81205781 | Msa0379810:intron | 45.0% | |
| TTAGAGTCAACACCCCCAAT+TGG | - | chr3_1:81205652-81205671 | Msa0379810:intron | 45.0% | |
| TTTCTCTCAATCCCATCGAC+AGG | - | chr3_1:81205964-81205983 | Msa0379810:intron | 45.0% | |
| TCAATCCCATCGACAGGATT+TGG | - | chr3_1:81205970-81205989 | Msa0379810:intron | 45.0% | |
| TATTTATTTGCCGCAGGAGG+TGG | - | chr3_1:81206115-81206134 | Msa0379810:intron | 45.0% | |
| ATCTTGTGGTGAGCGTTTCT+TGG | - | chr3_1:81206214-81206233 | Msa0379810:intron | 45.0% | |
| !! | ACTATGTAGGGTTGGCTACA+TGG | + | chr3_1:81206331-81206350 | None:intergenic | 45.0% |
| ATGTAGCCAACCCTACATAG+TGG | - | chr3_1:81206330-81206349 | Msa0379810:intron | 45.0% | |
| TGTAGCCAACCCTACATAGT+GGG | - | chr3_1:81206331-81206350 | Msa0379810:intron | 45.0% | |
| CTTATCCCACTATGTAGGGT+TGG | + | chr3_1:81206339-81206358 | None:intergenic | 45.0% | |
| ! | CAACCCTACATAGTGGGATA+AGG | - | chr3_1:81206337-81206356 | Msa0379810:intron | 45.0% |
| ! | CAAGCCTTATCCCACTATGT+AGG | + | chr3_1:81206344-81206363 | None:intergenic | 45.0% |
| ! | CTACATAGTGGGATAAGGCT+TGG | - | chr3_1:81206342-81206361 | Msa0379810:intron | 45.0% |
| TGTTGTTAGAACACCCACCA+AGG | - | chr3_1:81206369-81206388 | Msa0379810:intron | 45.0% | |
| ! | CACCCACCAAGGCTTTTTAT+AGG | - | chr3_1:81206380-81206399 | Msa0379810:intron | 45.0% |
| ! | GTGGACTATTTGTAGCCTGT+AGG | - | chr3_1:81206441-81206460 | Msa0379810:intron | 45.0% |
| AGAGATAAGACGTGCCCATA+AGG | + | chr3_1:81206497-81206516 | None:intergenic | 45.0% | |
| GCCTACTTTCCATACAGTTG+AGG | - | chr3_1:81206598-81206617 | Msa0379810:intron | 45.0% | |
| GCCTCAACTGTATGGAAAGT+AGG | + | chr3_1:81206602-81206621 | None:intergenic | 45.0% | |
| ATGTGTTCCATGTCATCCAG+TGG | - | chr3_1:81206749-81206768 | Msa0379810:intron | 45.0% | |
| CAAAATGCCACTGGATGACA+TGG | + | chr3_1:81206759-81206778 | None:intergenic | 45.0% | |
| !! | GGGTCATTTTGCCTATCATG+AGG | - | chr3_1:81206887-81206906 | Msa0379810:intron | 45.0% |
| TTGGGTAATGTTGAAGGCGA+TGG | + | chr3_1:81206917-81206936 | None:intergenic | 45.0% | |
| AGGCAAGTTTGCAGGAATCT+TGG | + | chr3_1:81207042-81207061 | None:intergenic | 45.0% | |
| CCTGCAAACTTGCCTTATGT+CGG | - | chr3_1:81207047-81207066 | Msa0379810:five_prime_UTR | 45.0% | |
| !!! | TTTTTTTTATTTTTTAAATC+AGG | - | chr3_1:81202882-81202901 | Msa0379810:intron | 5.0% |
| !!! | TTTTTTTATTTTTTAAATCA+GGG | - | chr3_1:81202883-81202902 | Msa0379810:intron | 5.0% |
| GCAGAGACTCAAGAGAACGA+AGG | + | chr3_1:81197824-81197843 | None:intergenic | 50.0% | |
| CGGTGGAAACTAGACTTAGG+TGG | - | chr3_1:81198224-81198243 | Msa0379810:intron | 50.0% | |
| CGACCCCACTTTGTGAGATA+AGG | - | chr3_1:81198419-81198438 | Msa0379810:intron | 50.0% | |
| GCCTAGTGGTGAAACTTGTC+AGG | - | chr3_1:81199547-81199566 | Msa0379810:intron | 50.0% | |
| ! | GCTTTTCTACACCAGTCAGC+AGG | + | chr3_1:81199596-81199615 | None:intergenic | 50.0% |
| CAGGAGAAAAAAGCTACGCG+AGG | - | chr3_1:81199739-81199758 | Msa0379810:intron | 50.0% | |
| GCAACTGAGATGGATGACAC+TGG | - | chr3_1:81200043-81200062 | Msa0379810:intron | 50.0% | |
| !! | GGTGGTAACGGCATCTTCAA+TGG | + | chr3_1:81200199-81200218 | None:intergenic | 50.0% |
| ACTCGCACACCAGTCGTATA+TGG | + | chr3_1:81200516-81200535 | None:intergenic | 50.0% | |
| TATACGACTGGTGTGCGAGT+TGG | - | chr3_1:81200516-81200535 | Msa0379810:intron | 50.0% | |
| !! | ACTGGTGTGCGAGTTGGTAA+AGG | - | chr3_1:81200522-81200541 | Msa0379810:intron | 50.0% |
| TTCAAGCAGCAGTCCTTGAC+TGG | - | chr3_1:81200547-81200566 | Msa0379810:intron | 50.0% | |
| ACTGGTCAGGCCCTGTAAAA+AGG | - | chr3_1:81200565-81200584 | Msa0379810:intron | 50.0% | |
| AAGGTCAGCCTCGATAGGAA+AGG | - | chr3_1:81201177-81201196 | Msa0379810:intron | 50.0% | |
| GACTCAGTTCCATTGGCAAC+TGG | - | chr3_1:81201630-81201649 | Msa0379810:intron | 50.0% | |
| GCATTGAAGCCAGTTGCCAA+TGG | + | chr3_1:81201642-81201661 | None:intergenic | 50.0% | |
| ! | TTGGCAACTGGCTTCAATGC+CGG | - | chr3_1:81201642-81201661 | Msa0379810:intron | 50.0% |
| AAGGGTTCAATAAGGGCGGA+AGG | - | chr3_1:81201870-81201889 | Msa0379810:intron | 50.0% | |
| ACGTGCTCTGATACCACTTC+TGG | - | chr3_1:81202585-81202604 | Msa0379810:intron | 50.0% | |
| ! | TGGCATTAAGAGGTGCAGAC+AGG | + | chr3_1:81202644-81202663 | None:intergenic | 50.0% |
| TGTAGGCCCTCATAAAGTGG+TGG | - | chr3_1:81203618-81203637 | Msa0379810:intron | 50.0% | |
| TTGAAATGGAGCAAGGCCAC+CGG | - | chr3_1:81203802-81203821 | Msa0379810:intron | 50.0% | |
| GATTGGCGATGTTGTATGGG+CGG | - | chr3_1:81203887-81203906 | Msa0379810:intron | 50.0% | |
| CCTCTAGTAACCTTGTTCCC+AGG | + | chr3_1:81204176-81204195 | None:intergenic | 50.0% | |
| CCTGGGAACAAGGTTACTAG+AGG | - | chr3_1:81204173-81204192 | Msa0379810:intron | 50.0% | |
| GGGAACAAGGTTACTAGAGG+TGG | - | chr3_1:81204176-81204195 | Msa0379810:intron | 50.0% | |
| TGCCTCAAAAAGTCCGTTGG+AGG | + | chr3_1:81204229-81204248 | None:intergenic | 50.0% | |
| AACTGCAACAGGTCAAGGAG+AGG | + | chr3_1:81204677-81204696 | None:intergenic | 50.0% | |
| AGTGGAGAAGTCTGTGGGTA+AGG | - | chr3_1:81204750-81204769 | Msa0379810:CDS | 50.0% | |
| GTGGAGAAGTCTGTGGGTAA+GGG | - | chr3_1:81204751-81204770 | Msa0379810:CDS | 50.0% | |
| !! | ACAGAAGCACTCCCAGTCAT+CGG | + | chr3_1:81205301-81205320 | None:intergenic | 50.0% |
| ! | TGCTGATTGTGCTGTACCTC+AGG | - | chr3_1:81205344-81205363 | Msa0379810:CDS | 50.0% |
| GCCACTTAATTGAGCTTGCG+GGG | - | chr3_1:81205625-81205644 | Msa0379810:intron | 50.0% | |
| CCACTTAATTGAGCTTGCGG+GGG | - | chr3_1:81205626-81205645 | Msa0379810:intron | 50.0% | |
| AGCCACACAATTGAGCTTGC+GGG | - | chr3_1:81205763-81205782 | Msa0379810:intron | 50.0% | |
| GTTCGGGAGCAGCTGTTTAT+AGG | + | chr3_1:81205872-81205891 | None:intergenic | 50.0% | |
| TCATCTGTTTCCACCTCCTG+CGG | + | chr3_1:81206128-81206147 | None:intergenic | 50.0% | |
| AGGGGAATTGACCTACCTAC+AGG | + | chr3_1:81206459-81206478 | None:intergenic | 50.0% | |
| CTCTTCCAATCCCGCCTTAT+GGG | - | chr3_1:81206480-81206499 | Msa0379810:intron | 50.0% | |
| ATAAGACGTGCCCATAAGGC+GGG | + | chr3_1:81206493-81206512 | None:intergenic | 50.0% | |
| GATAAGACGTGCCCATAAGG+CGG | + | chr3_1:81206494-81206513 | None:intergenic | 50.0% | |
| GCGATGGTTTCCCTCATGAT+AGG | + | chr3_1:81206901-81206920 | None:intergenic | 50.0% | |
| CCGACATAAGGCAAGTTTGC+AGG | + | chr3_1:81207050-81207069 | None:intergenic | 50.0% | |
| ACAAAGTGGGGTCGGCTACA+TGG | + | chr3_1:81198413-81198432 | None:intergenic | 55.0% | |
| CAATGCAGGCCGTACGAACA+TGG | - | chr3_1:81198506-81198525 | Msa0379810:intron | 55.0% | |
| ! | TGTTTGGCGGACACCCCATA+TGG | - | chr3_1:81198533-81198552 | Msa0379810:intron | 55.0% |
| ! | GTTTGGCGGACACCCCATAT+GGG | - | chr3_1:81198534-81198553 | Msa0379810:intron | 55.0% |
| GCAACAAGTACCCTGCTGAC+TGG | - | chr3_1:81199582-81199601 | Msa0379810:intron | 55.0% | |
| GCACTTGTCTGCACATCGGT+CGG | + | chr3_1:81199794-81199813 | None:intergenic | 55.0% | |
| TTACAGGGCCTGACCAGTCA+AGG | + | chr3_1:81200563-81200582 | None:intergenic | 55.0% | |
| ! | TGGCAACTGGCTTCAATGCC+GGG | - | chr3_1:81201643-81201662 | Msa0379810:intron | 55.0% |
| ! | TAAGAGGTGCAGACAGGCCA+GGG | + | chr3_1:81202638-81202657 | None:intergenic | 55.0% |
| ! | TTAAGAGGTGCAGACAGGCC+AGG | + | chr3_1:81202639-81202658 | None:intergenic | 55.0% |
| CATGGAACTGCCCCTGGATA+TGG | + | chr3_1:81203162-81203181 | None:intergenic | 55.0% | |
| AGGCCCTCATAAAGTGGTGG+TGG | - | chr3_1:81203621-81203640 | Msa0379810:intron | 55.0% | |
| CCGCCACCACCACTTTATGA+GGG | + | chr3_1:81203627-81203646 | None:intergenic | 55.0% | |
| !! | CCCTCATAAAGTGGTGGTGG+CGG | - | chr3_1:81203624-81203643 | Msa0379810:intron | 55.0% |
| ACCGCCACCACCACTTTATG+AGG | + | chr3_1:81203628-81203647 | None:intergenic | 55.0% | |
| TGGGCGGTAAAGAACCGACA+CGG | - | chr3_1:81203903-81203922 | Msa0379810:intron | 55.0% | |
| CCCCCGCAAGCTCAATTAAG+TGG | + | chr3_1:81205629-81205648 | None:intergenic | 55.0% | |
| GCCACACAATTGAGCTTGCG+GGG | - | chr3_1:81205764-81205783 | Msa0379810:intron | 55.0% | |
| CCACACAATTGAGCTTGCGG+GGG | - | chr3_1:81205765-81205784 | Msa0379810:intron | 55.0% | |
| GCAGGAGGTGGAAACAGATG+AGG | - | chr3_1:81206127-81206146 | Msa0379810:intron | 55.0% | |
| AAGGCGGGATTGGAAGAGGA+GGG | + | chr3_1:81206478-81206497 | None:intergenic | 55.0% | |
| TAAGGCGGGATTGGAAGAGG+AGG | + | chr3_1:81206479-81206498 | None:intergenic | 55.0% | |
| CCATAAGGCGGGATTGGAAG+AGG | + | chr3_1:81206482-81206501 | None:intergenic | 55.0% | |
| CCTCTTCCAATCCCGCCTTA+TGG | - | chr3_1:81206479-81206498 | Msa0379810:intron | 55.0% | |
| AAGTCGCGGCCTCAACTGTA+TGG | + | chr3_1:81206610-81206629 | None:intergenic | 55.0% | |
| CTCTGTTTCGCAGCAAGTCG+CGG | + | chr3_1:81206624-81206643 | None:intergenic | 55.0% | |
| CAACGTGACCGGATGCCTAG+TGG | - | chr3_1:81199533-81199552 | Msa0379810:CDS | 60.0% | |
| ! | GCAGCAGTCCTTGACTGGTC+AGG | - | chr3_1:81200552-81200571 | Msa0379810:intron | 60.0% |
| ! | CAACTGGCTTCAATGCCGGG+AGG | - | chr3_1:81201646-81201665 | Msa0379810:intron | 60.0% |
| GGGCGGTAAAGAACCGACAC+GGG | - | chr3_1:81203904-81203923 | Msa0379810:intron | 60.0% | |
| CCCCCGCAAGCTCAATTGTG+TGG | + | chr3_1:81205768-81205787 | None:intergenic | 60.0% | |
| AGGCGGGATTGGAAGAGGAG+GGG | + | chr3_1:81206477-81206496 | None:intergenic | 60.0% | |
| ACGTGCCCATAAGGCGGGAT+TGG | + | chr3_1:81206488-81206507 | None:intergenic | 60.0% | |
| !! | AGTGGTGGTGGCGGTGAGCT+CGG | - | chr3_1:81203633-81203652 | Msa0379810:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 81197738 | 81207100 | 81197738 | ID=Msa0379810;Name=Msa0379810 |
| chr3_1 | mRNA | 81197738 | 81207100 | 81197738 | ID=Msa0379810-mRNA-1;Parent=Msa0379810;Name=Msa0379810-mRNA-1;_AED=0.08;_eAED=0.08;_QI=139|0.71|0.75|1|0.85|0.87|8|426|459 |
| chr3_1 | exon | 81197738 | 81198223 | 81197738 | ID=Msa0379810-mRNA-1:exon:20550;Parent=Msa0379810-mRNA-1 |
| chr3_1 | exon | 81198660 | 81198707 | 81198660 | ID=Msa0379810-mRNA-1:exon:20549;Parent=Msa0379810-mRNA-1 |
| chr3_1 | exon | 81199473 | 81199563 | 81199473 | ID=Msa0379810-mRNA-1:exon:20548;Parent=Msa0379810-mRNA-1 |
| chr3_1 | exon | 81203127 | 81203233 | 81203127 | ID=Msa0379810-mRNA-1:exon:20547;Parent=Msa0379810-mRNA-1 |
| chr3_1 | exon | 81203322 | 81203382 | 81203322 | ID=Msa0379810-mRNA-1:exon:20546;Parent=Msa0379810-mRNA-1 |
| chr3_1 | exon | 81204252 | 81204433 | 81204252 | ID=Msa0379810-mRNA-1:exon:20545;Parent=Msa0379810-mRNA-1 |
| chr3_1 | exon | 81204583 | 81205386 | 81204583 | ID=Msa0379810-mRNA-1:exon:20544;Parent=Msa0379810-mRNA-1 |
| chr3_1 | exon | 81206935 | 81207100 | 81206935 | ID=Msa0379810-mRNA-1:exon:20543;Parent=Msa0379810-mRNA-1 |
| chr3_1 | five_prime_UTR | 81206962 | 81207100 | 81206962 | ID=Msa0379810-mRNA-1:five_prime_utr;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81206935 | 81206961 | 81206935 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81204583 | 81205386 | 81204583 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81204252 | 81204433 | 81204252 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81203322 | 81203382 | 81203322 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81203127 | 81203233 | 81203127 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81199473 | 81199563 | 81199473 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81198660 | 81198707 | 81198660 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | CDS | 81198164 | 81198223 | 81198164 | ID=Msa0379810-mRNA-1:cds;Parent=Msa0379810-mRNA-1 |
| chr3_1 | three_prime_UTR | 81197738 | 81198163 | 81197738 | ID=Msa0379810-mRNA-1:three_prime_utr;Parent=Msa0379810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
