AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0380800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380800 MtrunA17_Chr3g0134481 90.761 184 17 0 1 184 1 184 6.57e-118 332
Msa0380800 MtrunA17_Chr3g0134461 70.769 195 46 2 1 184 1 195 1.46e-85 250
Msa0380800 MtrunA17_Chr3g0137101 82.707 133 23 0 1 133 1 133 1.52e-73 233
Msa0380800 MtrunA17_Chr3g0137101 72.917 48 13 0 134 181 200 247 6.67e-19 83.6
Msa0380800 MtrunA17_Chr4g0067981 46.444 239 68 3 3 181 26 264 3.00e-63 206
Msa0380800 MtrunA17_Chr2g0294911 45.532 235 70 3 5 181 26 260 3.75e-62 202
Msa0380800 MtrunA17_Chr3g0123131 44.915 236 68 2 8 181 13 248 1.29e-60 197
Msa0380800 MtrunA17_Chr8g0376881 45.339 236 69 2 6 181 23 258 3.23e-60 196
Msa0380800 MtrunA17_Chr1g0149841 71.318 129 37 0 5 133 2 130 5.41e-59 191
Msa0380800 MtrunA17_Chr1g0149841 82.609 46 8 0 136 181 195 240 1.43e-18 82.4
Msa0380800 MtrunA17_Chr2g0304841 65.909 132 45 0 2 133 12 143 2.33e-57 191
Msa0380800 MtrunA17_Chr2g0304841 66.667 48 16 0 134 181 215 262 6.27e-16 75.1
Msa0380800 MtrunA17_Chr1g0149851 67.692 130 42 0 5 134 2 131 1.06e-55 184
Msa0380800 MtrunA17_Chr7g0275891 66.154 130 43 1 5 133 2 131 4.52e-54 175
Msa0380800 MtrunA17_Chr7g0275891 50.794 63 18 1 132 181 191 253 7.95e-13 65.5
Msa0380800 MtrunA17_Chr7g0275401 52.632 171 77 1 5 175 2 168 2.19e-51 166
Msa0380800 MtrunA17_Chr7g0275401 62.000 50 19 0 132 181 192 241 4.84e-15 71.2
Msa0380800 MtrunA17_Chr4g0074411 61.719 128 49 0 2 129 12 139 4.93e-50 170
Msa0380800 MtrunA17_Chr4g0074411 66.667 48 16 0 134 181 203 250 8.90e-15 71.6
Msa0380800 MtrunA17_Chr4g0074401 62.903 124 46 0 6 129 15 138 5.39e-48 164
Msa0380800 MtrunA17_Chr4g0074401 64.583 48 17 0 134 181 205 252 4.59e-14 69.3
Msa0380800 MtrunA17_Chr1g0161431 61.905 126 48 0 4 129 7 132 1.95e-46 160
Msa0380800 MtrunA17_Chr1g0161431 66.667 48 16 0 134 181 202 249 4.48e-16 75.5
Msa0380800 MtrunA17_Chr4g0009851 36.449 214 100 3 3 181 6 218 2.05e-40 139
Msa0380800 MtrunA17_Chr4g0009901 35.407 209 99 3 8 181 10 217 1.24e-36 128
Msa0380800 MtrunA17_Chr6g0471041 34.597 211 104 2 7 183 13 223 4.28e-34 124
Msa0380800 MtrunA17_Chr4g0074421 68.493 73 23 0 57 129 1 73 1.80e-30 110
Msa0380800 MtrunA17_Chr4g0074421 64.583 48 17 0 134 181 135 182 6.72e-16 72.0
Msa0380800 MtrunA17_Chr4g0009981 34.146 164 73 1 53 181 2 165 1.36e-28 107
Msa0380800 MtrunA17_Chr1g0149831 70.149 67 20 0 67 133 1 67 4.61e-27 102
Msa0380800 MtrunA17_Chr1g0149831 71.739 46 10 1 136 181 132 174 3.17e-14 68.2
Msa0380800 MtrunA17_Chr1g0181811 40.496 121 69 2 12 129 85 205 4.04e-23 95.5
Msa0380800 MtrunA17_Chr4g0030271 41.322 121 68 1 12 129 89 209 8.83e-23 94.7
Msa0380800 MtrunA17_Chr3g0127941 38.889 126 72 2 12 133 56 180 1.94e-22 93.6
Msa0380800 MtrunA17_Chr7g0276361 38.194 144 77 4 1 135 1 141 4.34e-22 92.8
Msa0380800 MtrunA17_Chr8g0383961 36.029 136 82 1 7 142 13 143 5.37e-22 89.7
Msa0380800 MtrunA17_Chr8g0345901 39.496 119 69 1 14 129 38 156 1.86e-20 87.8
Msa0380800 MtrunA17_Chr6g0456631 33.858 127 81 3 5 129 6 131 1.89e-20 83.6
Msa0380800 MtrunA17_Chr8g0391911 34.959 123 78 2 8 129 9 130 4.88e-20 84.3
Msa0380800 MtrunA17_Chr4g0061021 34.711 121 76 1 12 129 33 153 1.62e-18 82.4
Msa0380800 MtrunA17_Chr3g0091641 33.884 121 77 1 12 129 24 144 1.05e-17 80.1
Msa0380800 MtrunA17_Chr4g0009991 36.975 119 41 2 100 184 1 119 1.57e-17 74.7
Msa0380800 MtrunA17_Chr5g0400241 39.837 123 68 3 8 128 14 132 1.17e-16 77.0
Msa0380800 MtrunA17_Chr5g0400241 57.778 45 19 0 137 181 316 360 1.25e-12 65.5
Msa0380800 MtrunA17_Chr8g0350761 32.609 138 84 3 11 139 20 157 4.50e-16 75.1
Msa0380800 MtrunA17_Chr6g0473731 29.630 135 54 2 88 181 10 144 1.15e-14 71.2
Msa0380800 MtrunA17_Chr4g0054981 35.246 122 75 2 8 128 14 132 4.77e-14 69.3
Msa0380800 MtrunA17_Chr4g0054981 55.319 47 21 0 137 183 315 361 2.49e-12 64.3
Msa0380800 MtrunA17_Chr4g0040481 60.000 45 18 0 137 181 163 207 1.79e-13 67.8
Msa0380800 MtrunA17_Chr2g0324891 60.000 45 18 0 137 181 166 210 4.33e-13 66.6
Msa0380800 MtrunA17_Chr4g0031961 44.928 69 34 1 117 181 112 180 4.38e-13 66.2
Msa0380800 MtrunA17_Chr7g0255711 52.083 48 23 0 134 181 93 140 1.46e-11 61.6
Msa0380800 MtrunA17_Chr8g0352871 26.786 168 98 5 14 160 11 174 6.68e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0380800 AT4G31920.1 53.571 224 58 1 6 183 11 234 5.40e-75 234
Msa0380800 AT2G25180.1 70.312 128 38 0 3 130 8 135 1.59e-59 195
Msa0380800 AT2G25180.1 64.000 50 18 0 132 181 195 244 2.92e-16 76.3
Msa0380800 AT5G58080.1 47.679 237 66 3 2 181 8 243 1.68e-56 188
Msa0380800 AT1G67710.1 44.118 238 66 5 9 181 8 243 4.09e-53 177
Msa0380800 AT3G16857.1 56.250 144 61 1 8 151 33 174 3.26e-50 171
Msa0380800 AT3G16857.1 73.913 46 12 0 136 181 241 286 1.58e-16 77.0
Msa0380800 AT3G16857.2 56.250 144 61 1 8 151 33 174 4.29e-50 171
Msa0380800 AT3G16857.2 73.913 46 12 0 136 181 241 286 1.65e-16 77.0
Msa0380800 AT2G01760.1 58.730 126 51 1 5 129 4 129 3.81e-44 150
Msa0380800 AT2G01760.1 61.538 52 20 0 132 183 200 251 1.42e-16 76.6
Msa0380800 AT2G01760.2 48.052 154 51 2 5 129 4 157 3.48e-38 135
Msa0380800 AT2G01760.2 61.538 52 20 0 132 183 228 279 1.68e-16 76.6
Msa0380800 AT3G16857.3 56.190 105 44 1 47 151 2 104 1.32e-34 128
Msa0380800 AT3G16857.3 73.913 46 12 0 136 181 171 216 1.49e-16 77.0
Msa0380800 AT1G67710.2 41.667 180 38 5 67 181 1 178 8.42e-31 116
Msa0380800 AT5G49240.1 31.120 241 105 3 5 184 35 275 5.43e-30 111
Msa0380800 AT5G24470.1 38.686 137 75 3 10 138 48 183 3.24e-23 96.3
Msa0380800 AT1G49190.1 37.398 123 77 0 7 129 29 151 5.76e-23 94.7
Msa0380800 AT5G60100.2 40.000 125 72 1 12 133 64 188 2.29e-22 93.6
Msa0380800 AT5G60100.7 40.496 121 69 1 12 129 64 184 2.38e-22 93.2
Msa0380800 AT5G60100.6 40.496 121 69 1 12 129 64 184 2.38e-22 93.2
Msa0380800 AT5G60100.4 40.496 121 69 1 12 129 64 184 2.38e-22 93.2
Msa0380800 AT5G60100.5 40.496 121 69 1 12 129 64 184 4.96e-22 92.8
Msa0380800 AT5G60100.3 40.496 121 69 1 12 129 64 184 4.96e-22 92.8
Msa0380800 AT5G60100.1 40.496 121 69 1 12 129 64 184 4.96e-22 92.8
Msa0380800 AT1G49190.2 37.398 123 77 0 7 129 29 151 5.97e-22 92.8
Msa0380800 AT2G46790.3 39.344 122 69 2 12 129 37 157 6.55e-22 92.0
Msa0380800 AT5G02810.1 40.323 124 71 1 12 132 78 201 6.78e-22 92.4
Msa0380800 AT2G46790.1 39.344 122 69 2 12 129 37 157 6.99e-22 92.0
Msa0380800 AT2G01760.3 64.062 64 22 1 67 129 1 64 2.93e-21 89.0
Msa0380800 AT2G01760.3 61.538 52 20 0 132 183 135 186 1.01e-16 76.6
Msa0380800 AT3G62670.1 39.844 128 75 1 2 129 31 156 1.42e-20 88.2
Msa0380800 AT5G61380.1 35.537 121 75 1 12 129 19 139 2.12e-18 82.4
Msa0380800 AT1G67710.3 35.000 160 37 5 87 181 12 169 9.54e-18 80.5
Msa0380800 AT5G44190.2 66.667 45 15 0 137 181 152 196 1.26e-14 71.2
Msa0380800 AT5G44190.1 66.667 45 15 0 137 181 152 196 1.29e-14 71.2
Msa0380800 AT2G20570.1 66.667 45 15 0 137 181 158 202 8.71e-14 68.9
Msa0380800 AT2G20570.2 66.667 45 15 0 137 181 174 218 9.44e-14 68.9
Msa0380800 AT4G18020.8 36.154 130 74 3 6 128 12 139 1.30e-13 68.6
Msa0380800 AT4G18020.8 57.447 47 20 0 137 183 301 347 2.58e-12 64.7
Msa0380800 AT4G18020.11 36.154 130 74 3 6 128 12 139 1.30e-13 68.6
Msa0380800 AT4G18020.11 57.447 47 20 0 137 183 301 347 2.58e-12 64.7
Msa0380800 AT4G18020.4 36.154 130 74 3 6 128 12 139 1.30e-13 68.6
Msa0380800 AT4G18020.4 57.447 47 20 0 137 183 301 347 2.58e-12 64.7
Msa0380800 AT4G18020.5 36.154 130 74 3 6 128 12 139 1.30e-13 68.6
Msa0380800 AT4G18020.5 57.447 47 20 0 137 183 301 347 2.58e-12 64.7
Msa0380800 AT4G18020.10 36.154 130 74 3 6 128 12 139 1.30e-13 68.6
Msa0380800 AT4G18020.10 57.447 47 20 0 137 183 301 347 2.58e-12 64.7
Msa0380800 AT4G18020.7 36.154 130 74 3 6 128 12 139 1.30e-13 68.6
Msa0380800 AT4G18020.7 57.447 47 20 0 137 183 301 347 2.58e-12 64.7
Msa0380800 AT4G18020.3 36.154 130 74 3 6 128 12 139 1.50e-13 68.6
Msa0380800 AT4G18020.3 49.091 55 28 0 129 183 293 347 2.41e-12 64.7
Msa0380800 AT4G18020.2 36.154 130 74 3 6 128 12 139 1.50e-13 68.6
Msa0380800 AT4G18020.2 49.091 55 28 0 129 183 293 347 2.41e-12 64.7
Msa0380800 AT4G18020.1 36.154 130 74 3 6 128 12 139 1.50e-13 68.6
Msa0380800 AT4G18020.1 49.091 55 28 0 129 183 293 347 2.41e-12 64.7
Msa0380800 AT4G18020.6 36.154 130 74 3 6 128 12 139 1.50e-13 68.6
Msa0380800 AT4G18020.6 49.091 55 28 0 129 183 293 347 2.41e-12 64.7
Msa0380800 AT4G18020.9 36.154 130 74 3 6 128 12 139 1.50e-13 68.6
Msa0380800 AT4G18020.9 49.091 55 28 0 129 183 293 347 2.41e-12 64.7
Msa0380800 AT5G07210.2 33.333 120 77 2 12 130 16 133 4.31e-13 67.0
Msa0380800 AT2G40970.1 54.167 48 22 0 134 181 107 154 1.34e-12 64.3
Msa0380800 AT5G59570.2 54.167 48 22 0 134 181 143 190 2.88e-12 63.9
Msa0380800 AT5G59570.1 54.167 48 22 0 134 181 143 190 2.88e-12 63.9
Msa0380800 AT3G46640.2 54.167 48 22 0 134 181 146 193 4.47e-12 63.5
Msa0380800 AT3G46640.1 54.167 48 22 0 134 181 146 193 4.47e-12 63.5
Msa0380800 AT3G46640.3 54.167 48 22 0 134 181 146 193 4.95e-12 63.5
Msa0380800 AT5G05090.1 52.083 48 23 0 134 181 83 130 1.25e-11 62.0
Msa0380800 AT3G10760.1 52.083 48 23 0 134 181 107 154 1.32e-11 62.4

Find 88 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCCTTCTCTCATGATTT+TGG 0.089089 3_1:-82760385 Msa0380800:CDS
CAAAAGCTTGGAACCTAATA+AGG 0.257363 3_1:+82759139 None:intergenic
AAGGTCTTCAATATTATTTA+TGG 0.259242 3_1:+82759055 None:intergenic
GTCCCAGTTTGTTTGGTCTA+TGG 0.314039 3_1:-82759679 Msa0380800:CDS
CTGAAAAGAATGGATGGTTC+TGG 0.324289 3_1:-82759348 Msa0380800:three_prime_UTR
AAACGGGCTATATTTAGATT+TGG 0.324315 3_1:+82758990 None:intergenic
CTTGAAGCTGTTAATCAGTT+AGG 0.332985 3_1:-82759639 Msa0380800:CDS
GCCATGAGCATGTCCTTATT+AGG 0.333265 3_1:-82759152 Msa0380800:three_prime_UTR
TAGTAGAGAAGAGAGAATAA+TGG 0.351916 3_1:-82760463 Msa0380800:exon
GGAACTTGTGGGACTTGAAA+TGG 0.353940 3_1:-82759975 Msa0380800:CDS
TATTTATTTGCTCGGTTTGT+GGG 0.365212 3_1:-82760486 Msa0380800:five_prime_UTR
TAAAAGAGCATTCTAATTTG+TGG 0.383501 3_1:+82759106 None:intergenic
AATGTTTCTGGTTTATGAAA+TGG 0.388291 3_1:-82759392 Msa0380800:three_prime_UTR
TCTGCTGAAACCTGTGAGAT+TGG 0.389884 3_1:-82759745 Msa0380800:CDS
TGGAGGAGCTAAGGAACATT+TGG 0.390210 3_1:-82759725 Msa0380800:CDS
TTATTTATTTGCTCGGTTTG+TGG 0.393836 3_1:-82760487 None:intergenic
GTTCCATAGACCAAACAAAC+TGG 0.396655 3_1:+82759676 None:intergenic
CCGGAGTATATTCTGATTAA+CGG 0.398230 3_1:+82759244 None:intergenic
ATACGGAGTCCCAGTTTGTT+TGG 0.408262 3_1:-82759686 Msa0380800:CDS
ATTCTGATTAACGGGAGTTA+TGG 0.411464 3_1:+82759253 None:intergenic
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3_1:-82759816 Msa0380800:intron
ACAATCTTTATTTATTTGCT+CGG 0.422303 3_1:-82760494 None:intergenic
AGTGATCAAATTAAACCATA+TGG 0.424198 3_1:+82759208 None:intergenic
AACTATCCCACTGGGTGAAA+AGG 0.434436 3_1:+82759299 None:intergenic
ACATTTGGCAGCATGTAATT+CGG 0.438242 3_1:-82759710 Msa0380800:CDS
GGAAGAAAATTGCAAAAGCT+TGG 0.440478 3_1:+82759127 None:intergenic
CGGAGTATATTCTGATTAAC+GGG 0.444913 3_1:+82759245 None:intergenic
GGTAATCTGAACGGGCAGTT+TGG 0.455986 3_1:-82759276 Msa0380800:three_prime_UTR
GCAGCATGTAATTCGGAATA+CGG 0.461939 3_1:-82759703 Msa0380800:CDS
AGCTTAAGTCCATCCATGTC+AGG 0.462326 3_1:+82760001 None:intergenic
CGGGCTATATTTAGATTTGG+AGG 0.465101 3_1:+82758993 None:intergenic
CACAACTAGTAATGTAATAA+CGG 0.482381 3_1:-82760086 Msa0380800:CDS
TAGACTCTTTCTGAAAAGAA+TGG 0.483472 3_1:-82759358 Msa0380800:three_prime_UTR
GGATAGTTGGTAATCTGAAC+GGG 0.486215 3_1:-82759284 Msa0380800:three_prime_UTR
CGTTAATCAGAATATACTCC+GGG 0.488840 3_1:-82759243 Msa0380800:three_prime_UTR
ACTAGAAAAGTGCCTGGAGA+TGG 0.493120 3_1:+82759458 None:intergenic
CGTTATTACATTACTAGTTG+TGG 0.495202 3_1:+82760087 None:intergenic
CTTAGCTCCTCCAATCTCAC+AGG 0.496928 3_1:+82759735 None:intergenic
GGACATGGCGACCCATCTCC+AGG 0.501261 3_1:-82759470 Msa0380800:CDS
CAGAAAATCACGGGCACCGT+GGG 0.504818 3_1:+82759764 None:intergenic
CAGATTACCAACTATCCCAC+TGG 0.509046 3_1:+82759290 None:intergenic
GGGGAATGCCAATGTCCATA+TGG 0.518747 3_1:-82759223 Msa0380800:three_prime_UTR
TAGAGGACTAGAAAAGTGCC+TGG 0.518904 3_1:+82759452 None:intergenic
TGTGAACTTCAGCGATTACC+AGG 0.522457 3_1:+82760026 None:intergenic
CTAGAAAAGTGCCTGGAGAT+GGG 0.532146 3_1:+82759459 None:intergenic
CTTAAGCTGCTGGAACTTGT+GGG 0.537675 3_1:-82759986 Msa0380800:CDS
TCCGATGGGAAATTGATCAC+TGG 0.542067 3_1:+82760434 None:intergenic
CTGTGAGATTGGAGGAGCTA+AGG 0.543793 3_1:-82759734 Msa0380800:CDS
CTCTTTCTGAAAAGAATGGA+TGG 0.549493 3_1:-82759354 Msa0380800:three_prime_UTR
ATTTAGATTTGGAGGGAGCA+AGG 0.549979 3_1:+82759001 None:intergenic
AGCGAGAACACGCATTCCGA+TGG 0.550357 3_1:+82760419 None:intergenic
ACTTAAGCTGCTGGAACTTG+TGG 0.552160 3_1:-82759987 Msa0380800:CDS
GCTGAAACCTGTGAGATTGG+AGG 0.556603 3_1:-82759742 Msa0380800:CDS
TGCATATGGTGATACGGAGC+TGG 0.563561 3_1:-82759802 Msa0380800:CDS
CATGGATGGACTTAAGCTGC+TGG 0.564074 3_1:-82759996 Msa0380800:CDS
TCCAAAATCATGAGAGAAGG+AGG 0.567608 3_1:+82760384 None:intergenic
GTTTCCAAAATCATGAGAGA+AGG 0.568894 3_1:+82760381 None:intergenic
GGGCTATATTTAGATTTGGA+GGG 0.573291 3_1:+82758994 None:intergenic
ATAAGGACATGCTCATGGCT+AGG 0.576667 3_1:+82759156 None:intergenic
ACCTAATAAGGACATGCTCA+TGG 0.580944 3_1:+82759151 None:intergenic
ATATGGACATTGGCATTCCC+CGG 0.581104 3_1:+82759225 None:intergenic
AAATTAAACCATATGGACAT+TGG 0.582977 3_1:+82759215 None:intergenic
TCCAGTGATCAATTTCCCAT+CGG 0.583447 3_1:-82760435 Msa0380800:CDS
GGGATAGTTGGTAATCTGAA+CGG 0.584367 3_1:-82759285 Msa0380800:three_prime_UTR
TTGTATAAATTAAAGCATAG+AGG 0.585792 3_1:+82759435 None:intergenic
CAGGTTTCAGCAGAAAATCA+CGG 0.587467 3_1:+82759754 None:intergenic
TGATCACTTGCAAAACAGCA+AGG 0.595265 3_1:-82759193 Msa0380800:three_prime_UTR
GTTGTCTGCATATGGTGATA+CGG 0.598779 3_1:-82759808 Msa0380800:CDS
TGATACGGAGCTGGTGATGA+AGG 0.599556 3_1:-82759793 Msa0380800:CDS
AAATCTTACAAGAGAGGACA+TGG 0.601706 3_1:-82759485 Msa0380800:CDS
CCGTTAATCAGAATATACTC+CGG 0.605300 3_1:-82759244 Msa0380800:three_prime_UTR
AGGTTTCAGCAGAAAATCAC+GGG 0.606322 3_1:+82759755 None:intergenic
CCCACTTACTTATGACAGGA+AGG 0.611035 3_1:+82759951 None:intergenic
TTCCATAGACCAAACAAACT+GGG 0.611190 3_1:+82759677 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.611220 3_1:+82760420 None:intergenic
CACCGTGGTATTGACATGAT+CGG 0.615660 3_1:+82760352 None:intergenic
GTTCACATGCCTGACATGGA+TGG 0.616361 3_1:-82760010 Msa0380800:CDS
TAACAGCTTCAAGAAACTTG+CGG 0.617068 3_1:+82759649 None:intergenic
TGTTGAAAATCTTACAAGAG+AGG 0.626999 3_1:-82759491 Msa0380800:CDS
TGAAGTTCACATGCCTGACA+TGG 0.628648 3_1:-82760014 Msa0380800:CDS
GTGATGAAGGCAATTTCCCA+CGG 0.657007 3_1:-82759780 Msa0380800:CDS
AAACATAGACATGTTTGACC+TGG 0.663608 3_1:-82760044 Msa0380800:CDS
GTAAATATTAAAACAGAACA+AGG 0.664926 3_1:+82759036 None:intergenic
CTCCGATCATGTCAATACCA+CGG 0.677443 3_1:-82760354 Msa0380800:intron
GCAGAAAATCACGGGCACCG+TGG 0.679138 3_1:+82759763 None:intergenic
AGATTACCAACTATCCCACT+GGG 0.681347 3_1:+82759291 None:intergenic
CGTGGTATTGACATGATCGG+AGG 0.690806 3_1:+82760355 None:intergenic
GTTAATCAGAATATACTCCG+GGG 0.763532 3_1:-82759242 Msa0380800:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCTATCTTTATTTATTTA+TGG - chr3_1:82759349-82759368 Msa0380800:three_prime_UTR 10.0%
!!! TATCTATCTTTATTTATTTA+TGG - chr3_1:82759349-82759368 Msa0380800:three_prime_UTR 10.0%
!! TTAGTATTATACACATAAAT+TGG + chr3_1:82759171-82759190 None:intergenic 15.0%
!! GTACAAAGTATAATAAAAAT+TGG + chr3_1:82759216-82759235 None:intergenic 15.0%
!!! TATCTTTATTTATTTATGGT+TGG - chr3_1:82759353-82759372 Msa0380800:three_prime_UTR 15.0%
!!! ATCTTTATTTATTTATGGTT+GGG - chr3_1:82759354-82759373 Msa0380800:three_prime_UTR 15.0%
!!! ATCAATTCAAAAATCTTTTT+GGG + chr3_1:82759961-82759980 None:intergenic 15.0%
!! TTAGTATTATACACATAAAT+TGG + chr3_1:82759171-82759190 None:intergenic 15.0%
!! GTACAAAGTATAATAAAAAT+TGG + chr3_1:82759216-82759235 None:intergenic 15.0%
!!! TATCTTTATTTATTTATGGT+TGG - chr3_1:82759353-82759372 Msa0380800:three_prime_UTR 15.0%
!!! ATCTTTATTTATTTATGGTT+GGG - chr3_1:82759354-82759373 Msa0380800:three_prime_UTR 15.0%
!!! ATCAATTCAAAAATCTTTTT+GGG + chr3_1:82759961-82759980 None:intergenic 15.0%
!!! TCTTTATTTATTTATGGTTG+GGG - chr3_1:82759355-82759374 Msa0380800:three_prime_UTR 20.0%
!!! CATCAATTCAAAAATCTTTT+TGG + chr3_1:82759962-82759981 None:intergenic 20.0%
!! TTGTATAAATTAAAGCATAG+AGG + chr3_1:82760043-82760062 None:intergenic 20.0%
!! AAGGTCTTCAATATTATTTA+TGG + chr3_1:82760423-82760442 None:intergenic 20.0%
!! GTAAATATTAAAACAGAACA+AGG + chr3_1:82760442-82760461 None:intergenic 20.0%
!!! TCTTTATTTATTTATGGTTG+GGG - chr3_1:82759355-82759374 Msa0380800:three_prime_UTR 20.0%
!!! CATCAATTCAAAAATCTTTT+TGG + chr3_1:82759962-82759981 None:intergenic 20.0%
!! TTGTATAAATTAAAGCATAG+AGG + chr3_1:82760043-82760062 None:intergenic 20.0%
!! AAGGTCTTCAATATTATTTA+TGG + chr3_1:82760423-82760442 None:intergenic 20.0%
!! GTAAATATTAAAACAGAACA+AGG + chr3_1:82760442-82760461 None:intergenic 20.0%
! CACAACTAGTAATGTAATAA+CGG - chr3_1:82759389-82759408 Msa0380800:three_prime_UTR 25.0%
!!! GAAATGAAATTGTTTTAGTG+TGG + chr3_1:82759891-82759910 None:intergenic 25.0%
!!! TCATGTTAATGTTGTTTTAC+TGG - chr3_1:82759924-82759943 Msa0380800:intron 25.0%
!!! AATGTTTCTGGTTTATGAAA+TGG - chr3_1:82760083-82760102 Msa0380800:CDS 25.0%
! AAATTAAACCATATGGACAT+TGG + chr3_1:82760263-82760282 None:intergenic 25.0%
! AGTGATCAAATTAAACCATA+TGG + chr3_1:82760270-82760289 None:intergenic 25.0%
!!! TAAAAGAGCATTCTAATTTG+TGG + chr3_1:82760372-82760391 None:intergenic 25.0%
! CACAACTAGTAATGTAATAA+CGG - chr3_1:82759389-82759408 Msa0380800:three_prime_UTR 25.0%
!!! GAAATGAAATTGTTTTAGTG+TGG + chr3_1:82759891-82759910 None:intergenic 25.0%
!!! TCATGTTAATGTTGTTTTAC+TGG - chr3_1:82759924-82759943 Msa0380800:intron 25.0%
!!! AATGTTTCTGGTTTATGAAA+TGG - chr3_1:82760083-82760102 Msa0380800:CDS 25.0%
! AAATTAAACCATATGGACAT+TGG + chr3_1:82760263-82760282 None:intergenic 25.0%
! AGTGATCAAATTAAACCATA+TGG + chr3_1:82760270-82760289 None:intergenic 25.0%
!!! TAAAAGAGCATTCTAATTTG+TGG + chr3_1:82760372-82760391 None:intergenic 25.0%
TAGTAGAGAAGAGAGAATAA+TGG - chr3_1:82759012-82759031 Msa0380800:three_prime_UTR 30.0%
!! TCAGAATCTCTATTTCTACA+TGG - chr3_1:82759253-82759272 Msa0380800:three_prime_UTR 30.0%
CGTTATTACATTACTAGTTG+TGG + chr3_1:82759391-82759410 None:intergenic 30.0%
TGTTGAAAATCTTACAAGAG+AGG - chr3_1:82759984-82760003 Msa0380800:CDS 30.0%
!!! ATTTTTTCGCTGAATGTTTC+TGG - chr3_1:82760071-82760090 Msa0380800:CDS 30.0%
! TAGACTCTTTCTGAAAAGAA+TGG - chr3_1:82760117-82760136 Msa0380800:intron 30.0%
! AATGCTCTTTTATGTATGAG+AGG - chr3_1:82760380-82760399 Msa0380800:CDS 30.0%
! ATGCTCTTTTATGTATGAGA+GGG - chr3_1:82760381-82760400 Msa0380800:CDS 30.0%
TAGTAGAGAAGAGAGAATAA+TGG - chr3_1:82759012-82759031 Msa0380800:three_prime_UTR 30.0%
!! TCAGAATCTCTATTTCTACA+TGG - chr3_1:82759253-82759272 Msa0380800:three_prime_UTR 30.0%
CGTTATTACATTACTAGTTG+TGG + chr3_1:82759391-82759410 None:intergenic 30.0%
TGTTGAAAATCTTACAAGAG+AGG - chr3_1:82759984-82760003 Msa0380800:CDS 30.0%
!!! ATTTTTTCGCTGAATGTTTC+TGG - chr3_1:82760071-82760090 Msa0380800:CDS 30.0%
! TAGACTCTTTCTGAAAAGAA+TGG - chr3_1:82760117-82760136 Msa0380800:intron 30.0%
! AATGCTCTTTTATGTATGAG+AGG - chr3_1:82760380-82760399 Msa0380800:CDS 30.0%
! ATGCTCTTTTATGTATGAGA+GGG - chr3_1:82760381-82760400 Msa0380800:CDS 30.0%
GTTTCCAAAATCATGAGAGA+AGG + chr3_1:82759097-82759116 None:intergenic 35.0%
GTATAAAAAGAAACACACCG+TGG + chr3_1:82759141-82759160 None:intergenic 35.0%
ACTTTGTACCTGTTATTGCT+TGG - chr3_1:82759227-82759246 Msa0380800:three_prime_UTR 35.0%
! TCTGAAATCCAAGCAATAAC+AGG + chr3_1:82759238-82759257 None:intergenic 35.0%
AAACATAGACATGTTTGACC+TGG - chr3_1:82759431-82759450 Msa0380800:three_prime_UTR 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - chr3_1:82759659-82759678 Msa0380800:CDS 35.0%
ACATTTGGCAGCATGTAATT+CGG - chr3_1:82759765-82759784 Msa0380800:CDS 35.0%
TTCCATAGACCAAACAAACT+GGG + chr3_1:82759801-82759820 None:intergenic 35.0%
TAACAGCTTCAAGAAACTTG+CGG + chr3_1:82759829-82759848 None:intergenic 35.0%
CTTGAAGCTGTTAATCAGTT+AGG - chr3_1:82759836-82759855 Msa0380800:intron 35.0%
!!! TAATGTTGTTTTACTGGCAG+AGG - chr3_1:82759930-82759949 Msa0380800:intron 35.0%
AAATCTTACAAGAGAGGACA+TGG - chr3_1:82759990-82760009 Msa0380800:CDS 35.0%
! CTCTTTCTGAAAAGAATGGA+TGG - chr3_1:82760121-82760140 Msa0380800:intron 35.0%
ATTCTGATTAACGGGAGTTA+TGG + chr3_1:82760225-82760244 None:intergenic 35.0%
CGGAGTATATTCTGATTAAC+GGG + chr3_1:82760233-82760252 None:intergenic 35.0%
CCGGAGTATATTCTGATTAA+CGG + chr3_1:82760234-82760253 None:intergenic 35.0%
CCGTTAATCAGAATATACTC+CGG - chr3_1:82760231-82760250 Msa0380800:intron 35.0%
CGTTAATCAGAATATACTCC+GGG - chr3_1:82760232-82760251 Msa0380800:intron 35.0%
GTTAATCAGAATATACTCCG+GGG - chr3_1:82760233-82760252 Msa0380800:intron 35.0%
CAAAAGCTTGGAACCTAATA+AGG + chr3_1:82760339-82760358 None:intergenic 35.0%
GGAAGAAAATTGCAAAAGCT+TGG + chr3_1:82760351-82760370 None:intergenic 35.0%
GGGCTATATTTAGATTTGGA+GGG + chr3_1:82760484-82760503 None:intergenic 35.0%
GTTTCCAAAATCATGAGAGA+AGG + chr3_1:82759097-82759116 None:intergenic 35.0%
GTATAAAAAGAAACACACCG+TGG + chr3_1:82759141-82759160 None:intergenic 35.0%
ACTTTGTACCTGTTATTGCT+TGG - chr3_1:82759227-82759246 Msa0380800:three_prime_UTR 35.0%
! TCTGAAATCCAAGCAATAAC+AGG + chr3_1:82759238-82759257 None:intergenic 35.0%
AAACATAGACATGTTTGACC+TGG - chr3_1:82759431-82759450 Msa0380800:three_prime_UTR 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - chr3_1:82759659-82759678 Msa0380800:CDS 35.0%
ACATTTGGCAGCATGTAATT+CGG - chr3_1:82759765-82759784 Msa0380800:CDS 35.0%
TTCCATAGACCAAACAAACT+GGG + chr3_1:82759801-82759820 None:intergenic 35.0%
TAACAGCTTCAAGAAACTTG+CGG + chr3_1:82759829-82759848 None:intergenic 35.0%
CTTGAAGCTGTTAATCAGTT+AGG - chr3_1:82759836-82759855 Msa0380800:intron 35.0%
!!! TAATGTTGTTTTACTGGCAG+AGG - chr3_1:82759930-82759949 Msa0380800:intron 35.0%
AAATCTTACAAGAGAGGACA+TGG - chr3_1:82759990-82760009 Msa0380800:CDS 35.0%
! CTCTTTCTGAAAAGAATGGA+TGG - chr3_1:82760121-82760140 Msa0380800:intron 35.0%
ATTCTGATTAACGGGAGTTA+TGG + chr3_1:82760225-82760244 None:intergenic 35.0%
CGGAGTATATTCTGATTAAC+GGG + chr3_1:82760233-82760252 None:intergenic 35.0%
CCGGAGTATATTCTGATTAA+CGG + chr3_1:82760234-82760253 None:intergenic 35.0%
CCGTTAATCAGAATATACTC+CGG - chr3_1:82760231-82760250 Msa0380800:intron 35.0%
CGTTAATCAGAATATACTCC+GGG - chr3_1:82760232-82760251 Msa0380800:intron 35.0%
GTTAATCAGAATATACTCCG+GGG - chr3_1:82760233-82760252 Msa0380800:intron 35.0%
CAAAAGCTTGGAACCTAATA+AGG + chr3_1:82760339-82760358 None:intergenic 35.0%
GGAAGAAAATTGCAAAAGCT+TGG + chr3_1:82760351-82760370 None:intergenic 35.0%
GGGCTATATTTAGATTTGGA+GGG + chr3_1:82760484-82760503 None:intergenic 35.0%
TCCAGTGATCAATTTCCCAT+CGG - chr3_1:82759040-82759059 Msa0380800:three_prime_UTR 40.0%
! TCCTCCTTCTCTCATGATTT+TGG - chr3_1:82759090-82759109 Msa0380800:three_prime_UTR 40.0%
TCCAAAATCATGAGAGAAGG+AGG + chr3_1:82759094-82759113 None:intergenic 40.0%
ACCTTCCTGTCATAAGTAAG+TGG - chr3_1:82759523-82759542 Msa0380800:CDS 40.0%
CCTTCCTGTCATAAGTAAGT+GGG - chr3_1:82759524-82759543 Msa0380800:CDS 40.0%
CTTCCTGTCATAAGTAAGTG+GGG - chr3_1:82759525-82759544 Msa0380800:CDS 40.0%
TTCCTGTCATAAGTAAGTGG+GGG - chr3_1:82759526-82759545 Msa0380800:CDS 40.0%
GTTGTCTGCATATGGTGATA+CGG - chr3_1:82759667-82759686 Msa0380800:CDS 40.0%
AGGTTTCAGCAGAAAATCAC+GGG + chr3_1:82759723-82759742 None:intergenic 40.0%
CAGGTTTCAGCAGAAAATCA+CGG + chr3_1:82759724-82759743 None:intergenic 40.0%
GCAGCATGTAATTCGGAATA+CGG - chr3_1:82759772-82759791 Msa0380800:CDS 40.0%
GTTCCATAGACCAAACAAAC+TGG + chr3_1:82759802-82759821 None:intergenic 40.0%
CTGAAAAGAATGGATGGTTC+TGG - chr3_1:82760127-82760146 Msa0380800:intron 40.0%
AGATTACCAACTATCCCACT+GGG + chr3_1:82760187-82760206 None:intergenic 40.0%
!! GGGATAGTTGGTAATCTGAA+CGG - chr3_1:82760190-82760209 Msa0380800:intron 40.0%
!! GGATAGTTGGTAATCTGAAC+GGG - chr3_1:82760191-82760210 Msa0380800:intron 40.0%
TGATCACTTGCAAAACAGCA+AGG - chr3_1:82760282-82760301 Msa0380800:intron 40.0%
ACCTAATAAGGACATGCTCA+TGG + chr3_1:82760327-82760346 None:intergenic 40.0%
ATTTAGATTTGGAGGGAGCA+AGG + chr3_1:82760477-82760496 None:intergenic 40.0%
CGGGCTATATTTAGATTTGG+AGG + chr3_1:82760485-82760504 None:intergenic 40.0%
TCCAGTGATCAATTTCCCAT+CGG - chr3_1:82759040-82759059 Msa0380800:three_prime_UTR 40.0%
! TCCTCCTTCTCTCATGATTT+TGG - chr3_1:82759090-82759109 Msa0380800:three_prime_UTR 40.0%
TCCAAAATCATGAGAGAAGG+AGG + chr3_1:82759094-82759113 None:intergenic 40.0%
ACCTTCCTGTCATAAGTAAG+TGG - chr3_1:82759523-82759542 Msa0380800:CDS 40.0%
CCTTCCTGTCATAAGTAAGT+GGG - chr3_1:82759524-82759543 Msa0380800:CDS 40.0%
CTTCCTGTCATAAGTAAGTG+GGG - chr3_1:82759525-82759544 Msa0380800:CDS 40.0%
TTCCTGTCATAAGTAAGTGG+GGG - chr3_1:82759526-82759545 Msa0380800:CDS 40.0%
GTTGTCTGCATATGGTGATA+CGG - chr3_1:82759667-82759686 Msa0380800:CDS 40.0%
AGGTTTCAGCAGAAAATCAC+GGG + chr3_1:82759723-82759742 None:intergenic 40.0%
CAGGTTTCAGCAGAAAATCA+CGG + chr3_1:82759724-82759743 None:intergenic 40.0%
GCAGCATGTAATTCGGAATA+CGG - chr3_1:82759772-82759791 Msa0380800:CDS 40.0%
GTTCCATAGACCAAACAAAC+TGG + chr3_1:82759802-82759821 None:intergenic 40.0%
CTGAAAAGAATGGATGGTTC+TGG - chr3_1:82760127-82760146 Msa0380800:intron 40.0%
AGATTACCAACTATCCCACT+GGG + chr3_1:82760187-82760206 None:intergenic 40.0%
!! GGGATAGTTGGTAATCTGAA+CGG - chr3_1:82760190-82760209 Msa0380800:intron 40.0%
!! GGATAGTTGGTAATCTGAAC+GGG - chr3_1:82760191-82760210 Msa0380800:intron 40.0%
TGATCACTTGCAAAACAGCA+AGG - chr3_1:82760282-82760301 Msa0380800:intron 40.0%
ACCTAATAAGGACATGCTCA+TGG + chr3_1:82760327-82760346 None:intergenic 40.0%
ATTTAGATTTGGAGGGAGCA+AGG + chr3_1:82760477-82760496 None:intergenic 40.0%
CGGGCTATATTTAGATTTGG+AGG + chr3_1:82760485-82760504 None:intergenic 40.0%
TCCGATGGGAAATTGATCAC+TGG + chr3_1:82759044-82759063 None:intergenic 45.0%
CTCCGATCATGTCAATACCA+CGG - chr3_1:82759121-82759140 Msa0380800:three_prime_UTR 45.0%
!! CACCGTGGTATTGACATGAT+CGG + chr3_1:82759126-82759145 None:intergenic 45.0%
TGTGAACTTCAGCGATTACC+AGG + chr3_1:82759452-82759471 None:intergenic 45.0%
TGAAGTTCACATGCCTGACA+TGG - chr3_1:82759461-82759480 Msa0380800:CDS 45.0%
AGCTTAAGTCCATCCATGTC+AGG + chr3_1:82759477-82759496 None:intergenic 45.0%
ACTTAAGCTGCTGGAACTTG+TGG - chr3_1:82759488-82759507 Msa0380800:CDS 45.0%
CTTAAGCTGCTGGAACTTGT+GGG - chr3_1:82759489-82759508 Msa0380800:CDS 45.0%
GGAACTTGTGGGACTTGAAA+TGG - chr3_1:82759500-82759519 Msa0380800:CDS 45.0%
CCCACTTACTTATGACAGGA+AGG + chr3_1:82759527-82759546 None:intergenic 45.0%
ATCCCCCACTTACTTATGAC+AGG + chr3_1:82759531-82759550 None:intergenic 45.0%
GTGATGAAGGCAATTTCCCA+CGG - chr3_1:82759695-82759714 Msa0380800:CDS 45.0%
TCTGCTGAAACCTGTGAGAT+TGG - chr3_1:82759730-82759749 Msa0380800:CDS 45.0%
TGGAGGAGCTAAGGAACATT+TGG - chr3_1:82759750-82759769 Msa0380800:CDS 45.0%
! ATACGGAGTCCCAGTTTGTT+TGG - chr3_1:82759789-82759808 Msa0380800:CDS 45.0%
! GTCCCAGTTTGTTTGGTCTA+TGG - chr3_1:82759796-82759815 Msa0380800:CDS 45.0%
!! CTAGAAAAGTGCCTGGAGAT+GGG + chr3_1:82760019-82760038 None:intergenic 45.0%
!! ACTAGAAAAGTGCCTGGAGA+TGG + chr3_1:82760020-82760039 None:intergenic 45.0%
!! TAGAGGACTAGAAAAGTGCC+TGG + chr3_1:82760026-82760045 None:intergenic 45.0%
! TTCAGATCCTTTTCACCCAG+TGG - chr3_1:82760169-82760188 Msa0380800:intron 45.0%
! TCAGATCCTTTTCACCCAGT+GGG - chr3_1:82760170-82760189 Msa0380800:intron 45.0%
AACTATCCCACTGGGTGAAA+AGG + chr3_1:82760179-82760198 None:intergenic 45.0%
! TTTTCACCCAGTGGGATAGT+TGG - chr3_1:82760178-82760197 Msa0380800:intron 45.0%
CAGATTACCAACTATCCCAC+TGG + chr3_1:82760188-82760207 None:intergenic 45.0%
ATATGGACATTGGCATTCCC+CGG + chr3_1:82760253-82760272 None:intergenic 45.0%
ATAAGGACATGCTCATGGCT+AGG + chr3_1:82760322-82760341 None:intergenic 45.0%
GCCATGAGCATGTCCTTATT+AGG - chr3_1:82760323-82760342 Msa0380800:intron 45.0%
TCCGATGGGAAATTGATCAC+TGG + chr3_1:82759044-82759063 None:intergenic 45.0%
CTCCGATCATGTCAATACCA+CGG - chr3_1:82759121-82759140 Msa0380800:three_prime_UTR 45.0%
!! CACCGTGGTATTGACATGAT+CGG + chr3_1:82759126-82759145 None:intergenic 45.0%
TGTGAACTTCAGCGATTACC+AGG + chr3_1:82759452-82759471 None:intergenic 45.0%
TGAAGTTCACATGCCTGACA+TGG - chr3_1:82759461-82759480 Msa0380800:CDS 45.0%
AGCTTAAGTCCATCCATGTC+AGG + chr3_1:82759477-82759496 None:intergenic 45.0%
ACTTAAGCTGCTGGAACTTG+TGG - chr3_1:82759488-82759507 Msa0380800:CDS 45.0%
CTTAAGCTGCTGGAACTTGT+GGG - chr3_1:82759489-82759508 Msa0380800:CDS 45.0%
GGAACTTGTGGGACTTGAAA+TGG - chr3_1:82759500-82759519 Msa0380800:CDS 45.0%
CCCACTTACTTATGACAGGA+AGG + chr3_1:82759527-82759546 None:intergenic 45.0%
ATCCCCCACTTACTTATGAC+AGG + chr3_1:82759531-82759550 None:intergenic 45.0%
GTGATGAAGGCAATTTCCCA+CGG - chr3_1:82759695-82759714 Msa0380800:CDS 45.0%
TCTGCTGAAACCTGTGAGAT+TGG - chr3_1:82759730-82759749 Msa0380800:CDS 45.0%
TGGAGGAGCTAAGGAACATT+TGG - chr3_1:82759750-82759769 Msa0380800:CDS 45.0%
! ATACGGAGTCCCAGTTTGTT+TGG - chr3_1:82759789-82759808 Msa0380800:CDS 45.0%
! GTCCCAGTTTGTTTGGTCTA+TGG - chr3_1:82759796-82759815 Msa0380800:CDS 45.0%
!! CTAGAAAAGTGCCTGGAGAT+GGG + chr3_1:82760019-82760038 None:intergenic 45.0%
!! ACTAGAAAAGTGCCTGGAGA+TGG + chr3_1:82760020-82760039 None:intergenic 45.0%
!! TAGAGGACTAGAAAAGTGCC+TGG + chr3_1:82760026-82760045 None:intergenic 45.0%
! TTCAGATCCTTTTCACCCAG+TGG - chr3_1:82760169-82760188 Msa0380800:intron 45.0%
! TCAGATCCTTTTCACCCAGT+GGG - chr3_1:82760170-82760189 Msa0380800:intron 45.0%
AACTATCCCACTGGGTGAAA+AGG + chr3_1:82760179-82760198 None:intergenic 45.0%
! TTTTCACCCAGTGGGATAGT+TGG - chr3_1:82760178-82760197 Msa0380800:intron 45.0%
CAGATTACCAACTATCCCAC+TGG + chr3_1:82760188-82760207 None:intergenic 45.0%
ATATGGACATTGGCATTCCC+CGG + chr3_1:82760253-82760272 None:intergenic 45.0%
ATAAGGACATGCTCATGGCT+AGG + chr3_1:82760322-82760341 None:intergenic 45.0%
GCCATGAGCATGTCCTTATT+AGG - chr3_1:82760323-82760342 Msa0380800:intron 45.0%
!! CGTGGTATTGACATGATCGG+AGG + chr3_1:82759123-82759142 None:intergenic 50.0%
GTTCACATGCCTGACATGGA+TGG - chr3_1:82759465-82759484 Msa0380800:CDS 50.0%
! CATGGATGGACTTAAGCTGC+TGG - chr3_1:82759479-82759498 Msa0380800:CDS 50.0%
TGCATATGGTGATACGGAGC+TGG - chr3_1:82759673-82759692 Msa0380800:CDS 50.0%
! TGATACGGAGCTGGTGATGA+AGG - chr3_1:82759682-82759701 Msa0380800:CDS 50.0%
GCTGAAACCTGTGAGATTGG+AGG - chr3_1:82759733-82759752 Msa0380800:CDS 50.0%
CTTAGCTCCTCCAATCTCAC+AGG + chr3_1:82759743-82759762 None:intergenic 50.0%
CTGTGAGATTGGAGGAGCTA+AGG - chr3_1:82759741-82759760 Msa0380800:CDS 50.0%
GGTAATCTGAACGGGCAGTT+TGG - chr3_1:82760199-82760218 Msa0380800:intron 50.0%
GGGGAATGCCAATGTCCATA+TGG - chr3_1:82760252-82760271 Msa0380800:intron 50.0%
!! CGTGGTATTGACATGATCGG+AGG + chr3_1:82759123-82759142 None:intergenic 50.0%
GTTCACATGCCTGACATGGA+TGG - chr3_1:82759465-82759484 Msa0380800:CDS 50.0%
! CATGGATGGACTTAAGCTGC+TGG - chr3_1:82759479-82759498 Msa0380800:CDS 50.0%
TGCATATGGTGATACGGAGC+TGG - chr3_1:82759673-82759692 Msa0380800:CDS 50.0%
! TGATACGGAGCTGGTGATGA+AGG - chr3_1:82759682-82759701 Msa0380800:CDS 50.0%
GCTGAAACCTGTGAGATTGG+AGG - chr3_1:82759733-82759752 Msa0380800:CDS 50.0%
CTTAGCTCCTCCAATCTCAC+AGG + chr3_1:82759743-82759762 None:intergenic 50.0%
CTGTGAGATTGGAGGAGCTA+AGG - chr3_1:82759741-82759760 Msa0380800:CDS 50.0%
GGTAATCTGAACGGGCAGTT+TGG - chr3_1:82760199-82760218 Msa0380800:intron 50.0%
GGGGAATGCCAATGTCCATA+TGG - chr3_1:82760252-82760271 Msa0380800:intron 50.0%
GCGAGAACACGCATTCCGAT+GGG + chr3_1:82759058-82759077 None:intergenic 55.0%
AGCGAGAACACGCATTCCGA+TGG + chr3_1:82759059-82759078 None:intergenic 55.0%
! CAGAAAATCACGGGCACCGT+GGG + chr3_1:82759714-82759733 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG + chr3_1:82759058-82759077 None:intergenic 55.0%
AGCGAGAACACGCATTCCGA+TGG + chr3_1:82759059-82759078 None:intergenic 55.0%
! CAGAAAATCACGGGCACCGT+GGG + chr3_1:82759714-82759733 None:intergenic 55.0%
! GCAGAAAATCACGGGCACCG+TGG + chr3_1:82759715-82759734 None:intergenic 60.0%
! GCAGAAAATCACGGGCACCG+TGG + chr3_1:82759715-82759734 None:intergenic 60.0%
GGACATGGCGACCCATCTCC+AGG - chr3_1:82760005-82760024 Msa0380800:CDS 65.0%
GGACATGGCGACCCATCTCC+AGG - chr3_1:82760005-82760024 Msa0380800:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 82758992 82760505 82758992 ID=Msa0380800;Name=Msa0380800
chr3_1 mRNA 82758992 82760505 82758992 ID=Msa0380800-mRNA-1;Parent=Msa0380800;Name=Msa0380800-mRNA-1;_AED=0.06;_eAED=0.06;_QI=39|1|1|1|1|1|4|467|184
chr3_1 exon 82758992 82759547 82758992 ID=Msa0380800-mRNA-1:exon:21129;Parent=Msa0380800-mRNA-1
chr3_1 exon 82759631 82759831 82759631 ID=Msa0380800-mRNA-1:exon:21128;Parent=Msa0380800-mRNA-1
chr3_1 exon 82759960 82760112 82759960 ID=Msa0380800-mRNA-1:exon:21127;Parent=Msa0380800-mRNA-1
chr3_1 exon 82760355 82760505 82760355 ID=Msa0380800-mRNA-1:exon:21126;Parent=Msa0380800-mRNA-1
chr3_1 five_prime_UTR 82760467 82760505 82760467 ID=Msa0380800-mRNA-1:five_prime_utr;Parent=Msa0380800-mRNA-1
chr3_1 CDS 82760355 82760466 82760355 ID=Msa0380800-mRNA-1:cds;Parent=Msa0380800-mRNA-1
chr3_1 CDS 82759960 82760112 82759960 ID=Msa0380800-mRNA-1:cds;Parent=Msa0380800-mRNA-1
chr3_1 CDS 82759631 82759831 82759631 ID=Msa0380800-mRNA-1:cds;Parent=Msa0380800-mRNA-1
chr3_1 CDS 82759459 82759547 82759459 ID=Msa0380800-mRNA-1:cds;Parent=Msa0380800-mRNA-1
chr3_1 three_prime_UTR 82758992 82759458 82758992 ID=Msa0380800-mRNA-1:three_prime_utr;Parent=Msa0380800-mRNA-1
Gene Sequence

>Msa0380800

ATGGATGATTCCAGTGATCAATTTCCCATCGGAATGCGTGTTCTCGCTGTCGACGACGATCCTCCTTCTCTCATGATTTTGGAAACTCTCCTCCGATCATGTCAATACCACGTAACCACAACTAGTAATGTAATAACGGCATTGACTATGTTGCGAGAAAACATAGACATGTTTGACCTGGTAATCGCTGAAGTTCACATGCCTGACATGGATGGACTTAAGCTGCTGGAACTTGTGGGACTTGAAATGGACCTTCCTGTCATAATGTTGTCTGCATATGGTGATACGGAGCTGGTGATGAAGGCAATTTCCCACGGTGCCCGTGATTTTCTGCTGAAACCTGTGAGATTGGAGGAGCTAAGGAACATTTGGCAGCATGTAATTCGGAATACGGAGTCCCAGTTTGTTTGGTCTATGGAACTGCACCGCAAGTTTCTTGAAGCTGTTAATCAGTTAGGAGTTGACAAGGCTGTACCCAAAAAGATTTTTGAATTGATGAATGTTGAAAATCTTACAAGAGAGGACATGGCGACCCATCTCCAGGCACTTTTCTAG
Protein sequence

>Msa0380800

MDDSSDQFPIGMRVLAVDDDPPSLMILETLLRSCQYHVTTTSNVITALTMLRENIDMFDLVIAEVHMPDMDGLKLLELVGLEMDLPVIMLSAYGDTELVMKAISHGARDFLLKPVRLEELRNIWQHVIRNTESQFVWSMELHRKFLEAVNQLGVDKAVPKKIFELMNVENLTREDMATHLQALF*