AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0430540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430540 MtrunA17_Chr3g0134481 90.761 184 17 0 1 184 1 184 1.40e-117 331
Msa0430540 MtrunA17_Chr3g0134461 70.256 195 47 2 1 184 1 195 1.55e-85 250
Msa0430540 MtrunA17_Chr3g0137101 81.955 133 24 0 1 133 1 133 6.61e-73 231
Msa0430540 MtrunA17_Chr3g0137101 72.917 48 13 0 134 181 200 247 7.35e-19 83.2
Msa0430540 MtrunA17_Chr4g0067981 45.607 239 70 3 3 181 26 264 1.74e-62 204
Msa0430540 MtrunA17_Chr2g0294911 44.681 235 72 3 5 181 26 260 2.76e-61 200
Msa0430540 MtrunA17_Chr3g0123131 44.068 236 70 2 8 181 13 248 7.27e-60 195
Msa0430540 MtrunA17_Chr8g0376881 44.492 236 71 2 6 181 23 258 1.68e-59 194
Msa0430540 MtrunA17_Chr1g0149841 69.767 129 39 0 5 133 2 130 3.02e-58 189
Msa0430540 MtrunA17_Chr1g0149841 82.609 46 8 0 136 181 195 240 1.31e-18 82.4
Msa0430540 MtrunA17_Chr2g0304841 65.152 132 46 0 2 133 12 143 8.46e-57 189
Msa0430540 MtrunA17_Chr2g0304841 66.667 48 16 0 134 181 215 262 6.27e-16 75.1
Msa0430540 MtrunA17_Chr1g0149851 66.154 130 44 0 5 134 2 131 6.66e-55 182
Msa0430540 MtrunA17_Chr7g0275891 65.385 130 44 1 5 133 2 131 2.13e-53 173
Msa0430540 MtrunA17_Chr7g0275891 50.794 63 18 1 132 181 191 253 7.57e-13 65.5
Msa0430540 MtrunA17_Chr7g0275401 51.462 171 79 1 5 175 2 168 1.25e-50 164
Msa0430540 MtrunA17_Chr7g0275401 62.000 50 19 0 132 181 192 241 4.84e-15 71.2
Msa0430540 MtrunA17_Chr4g0074411 60.938 128 50 0 2 129 12 139 2.32e-49 168
Msa0430540 MtrunA17_Chr4g0074411 66.667 48 16 0 134 181 203 250 9.89e-15 71.2
Msa0430540 MtrunA17_Chr4g0074401 62.903 124 46 0 6 129 15 138 4.52e-48 164
Msa0430540 MtrunA17_Chr4g0074401 64.583 48 17 0 134 181 205 252 4.68e-14 69.3
Msa0430540 MtrunA17_Chr1g0161431 60.317 126 50 0 4 129 7 132 9.59e-46 159
Msa0430540 MtrunA17_Chr1g0161431 66.667 48 16 0 134 181 202 249 4.74e-16 75.1
Msa0430540 MtrunA17_Chr4g0009851 36.449 214 100 3 3 181 6 218 2.65e-40 138
Msa0430540 MtrunA17_Chr4g0009901 35.407 209 99 3 8 181 10 217 2.03e-36 127
Msa0430540 MtrunA17_Chr6g0471041 34.597 211 104 2 7 183 13 223 9.13e-34 123
Msa0430540 MtrunA17_Chr4g0074421 67.123 73 24 0 57 129 1 73 4.29e-30 109
Msa0430540 MtrunA17_Chr4g0074421 64.583 48 17 0 134 181 135 182 6.58e-16 72.4
Msa0430540 MtrunA17_Chr4g0009981 34.146 164 73 1 53 181 2 165 1.74e-28 106
Msa0430540 MtrunA17_Chr1g0149831 68.657 67 21 0 67 133 1 67 1.13e-26 101
Msa0430540 MtrunA17_Chr1g0149831 71.739 46 10 1 136 181 132 174 3.11e-14 68.2
Msa0430540 MtrunA17_Chr1g0181811 38.843 121 71 2 12 129 85 205 1.73e-22 94.0
Msa0430540 MtrunA17_Chr4g0030271 40.496 121 69 1 12 129 89 209 2.94e-22 93.2
Msa0430540 MtrunA17_Chr8g0383961 36.029 136 82 1 7 142 13 143 7.27e-22 89.4
Msa0430540 MtrunA17_Chr3g0127941 37.302 126 74 2 12 133 56 180 8.31e-22 92.0
Msa0430540 MtrunA17_Chr7g0276361 36.806 144 79 4 1 135 1 141 2.24e-21 90.5
Msa0430540 MtrunA17_Chr8g0345901 39.496 119 69 1 14 129 38 156 1.69e-20 88.2
Msa0430540 MtrunA17_Chr6g0456631 33.858 127 81 3 5 129 6 131 2.39e-20 83.2
Msa0430540 MtrunA17_Chr8g0391911 34.959 123 78 2 8 129 9 130 6.13e-20 84.0
Msa0430540 MtrunA17_Chr4g0061021 35.537 121 75 1 12 129 33 153 5.21e-19 84.0
Msa0430540 MtrunA17_Chr3g0091641 34.711 121 76 1 12 129 24 144 3.58e-18 81.3
Msa0430540 MtrunA17_Chr4g0009991 36.975 119 41 2 100 184 1 119 1.57e-17 74.7
Msa0430540 MtrunA17_Chr5g0400241 39.837 123 68 3 8 128 14 132 1.27e-16 77.0
Msa0430540 MtrunA17_Chr5g0400241 57.778 45 19 0 137 181 316 360 1.22e-12 65.5
Msa0430540 MtrunA17_Chr8g0350761 31.159 138 86 3 11 139 20 157 2.13e-15 73.2
Msa0430540 MtrunA17_Chr6g0473731 29.630 135 54 2 88 181 10 144 1.05e-14 71.2
Msa0430540 MtrunA17_Chr4g0054981 35.246 122 75 2 8 128 14 132 5.11e-14 69.3
Msa0430540 MtrunA17_Chr4g0054981 55.319 47 21 0 137 183 315 361 2.42e-12 64.3
Msa0430540 MtrunA17_Chr4g0040481 60.000 45 18 0 137 181 163 207 1.74e-13 67.8
Msa0430540 MtrunA17_Chr4g0031961 44.928 69 34 1 117 181 112 180 4.09e-13 66.2
Msa0430540 MtrunA17_Chr2g0324891 60.000 45 18 0 137 181 166 210 4.09e-13 66.6
Msa0430540 MtrunA17_Chr7g0255711 52.083 48 23 0 134 181 93 140 1.45e-11 61.6
Msa0430540 MtrunA17_Chr8g0352871 26.786 168 98 5 14 160 11 174 5.07e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430540 AT4G31920.1 52.679 224 60 1 6 183 11 234 2.80e-74 233
Msa0430540 AT2G25180.1 68.750 128 40 0 3 130 8 135 1.01e-58 193
Msa0430540 AT2G25180.1 64.000 50 18 0 132 181 195 244 3.15e-16 76.3
Msa0430540 AT5G58080.1 47.257 237 67 3 2 181 8 243 4.70e-56 187
Msa0430540 AT1G67710.1 43.277 238 68 5 9 181 8 243 1.92e-52 175
Msa0430540 AT3G16857.1 54.861 144 63 1 8 151 33 174 1.69e-49 169
Msa0430540 AT3G16857.1 73.913 46 12 0 136 181 241 286 1.49e-16 77.0
Msa0430540 AT3G16857.2 54.861 144 63 1 8 151 33 174 2.28e-49 169
Msa0430540 AT3G16857.2 73.913 46 12 0 136 181 241 286 1.51e-16 77.0
Msa0430540 AT2G01760.1 57.143 126 53 1 5 129 4 129 2.20e-43 148
Msa0430540 AT2G01760.1 61.538 52 20 0 132 183 200 251 1.37e-16 76.6
Msa0430540 AT2G01760.2 46.753 154 53 2 5 129 4 157 1.94e-37 133
Msa0430540 AT2G01760.2 61.538 52 20 0 132 183 228 279 1.64e-16 76.6
Msa0430540 AT3G16857.3 55.238 105 45 1 47 151 2 104 2.76e-34 127
Msa0430540 AT3G16857.3 73.913 46 12 0 136 181 171 216 1.39e-16 77.0
Msa0430540 AT1G67710.2 41.111 180 39 5 67 181 1 178 1.62e-30 115
Msa0430540 AT5G49240.1 30.705 241 106 3 5 184 35 275 1.56e-29 110
Msa0430540 AT1G49190.1 37.398 123 77 0 7 129 29 151 5.47e-23 94.7
Msa0430540 AT5G24470.1 37.226 137 77 3 10 138 48 183 1.64e-22 94.4
Msa0430540 AT1G49190.2 37.398 123 77 0 7 129 29 151 5.75e-22 92.8
Msa0430540 AT5G60100.2 38.400 125 74 1 12 133 64 188 1.01e-21 92.0
Msa0430540 AT5G60100.7 38.843 121 71 1 12 129 64 184 1.10e-21 91.3
Msa0430540 AT5G60100.6 38.843 121 71 1 12 129 64 184 1.10e-21 91.3
Msa0430540 AT5G60100.4 38.843 121 71 1 12 129 64 184 1.10e-21 91.3
Msa0430540 AT5G60100.5 38.843 121 71 1 12 129 64 184 2.51e-21 90.5
Msa0430540 AT5G60100.3 38.843 121 71 1 12 129 64 184 2.51e-21 90.5
Msa0430540 AT5G60100.1 38.843 121 71 1 12 129 64 184 2.51e-21 90.5
Msa0430540 AT5G02810.1 38.710 124 73 1 12 132 78 201 3.04e-21 90.5
Msa0430540 AT2G46790.1 37.705 122 71 2 12 129 37 157 3.23e-21 90.1
Msa0430540 AT2G46790.3 37.705 122 71 2 12 129 37 157 3.31e-21 90.1
Msa0430540 AT2G01760.3 62.500 64 23 1 67 129 1 64 6.38e-21 88.2
Msa0430540 AT2G01760.3 61.538 52 20 0 132 183 135 186 9.68e-17 76.6
Msa0430540 AT3G62670.1 39.844 128 75 1 2 129 31 156 1.38e-20 88.2
Msa0430540 AT5G61380.1 36.364 121 74 1 12 129 19 139 8.69e-19 83.6
Msa0430540 AT1G67710.3 35.000 160 37 5 87 181 12 169 9.00e-18 80.5
Msa0430540 AT5G44190.1 66.667 45 15 0 137 181 152 196 1.23e-14 71.2
Msa0430540 AT5G44190.2 66.667 45 15 0 137 181 152 196 1.28e-14 71.2
Msa0430540 AT2G20570.1 66.667 45 15 0 137 181 158 202 8.55e-14 68.9
Msa0430540 AT2G20570.2 66.667 45 15 0 137 181 174 218 9.53e-14 68.9
Msa0430540 AT4G18020.8 36.154 130 74 3 6 128 12 139 1.36e-13 68.6
Msa0430540 AT4G18020.8 57.447 47 20 0 137 183 301 347 2.44e-12 64.7
Msa0430540 AT4G18020.11 36.154 130 74 3 6 128 12 139 1.36e-13 68.6
Msa0430540 AT4G18020.11 57.447 47 20 0 137 183 301 347 2.44e-12 64.7
Msa0430540 AT4G18020.4 36.154 130 74 3 6 128 12 139 1.36e-13 68.6
Msa0430540 AT4G18020.4 57.447 47 20 0 137 183 301 347 2.44e-12 64.7
Msa0430540 AT4G18020.5 36.154 130 74 3 6 128 12 139 1.36e-13 68.6
Msa0430540 AT4G18020.5 57.447 47 20 0 137 183 301 347 2.44e-12 64.7
Msa0430540 AT4G18020.10 36.154 130 74 3 6 128 12 139 1.36e-13 68.6
Msa0430540 AT4G18020.10 57.447 47 20 0 137 183 301 347 2.44e-12 64.7
Msa0430540 AT4G18020.7 36.154 130 74 3 6 128 12 139 1.36e-13 68.6
Msa0430540 AT4G18020.7 57.447 47 20 0 137 183 301 347 2.44e-12 64.7
Msa0430540 AT4G18020.3 36.154 130 74 3 6 128 12 139 1.51e-13 68.2
Msa0430540 AT4G18020.3 49.091 55 28 0 129 183 293 347 2.30e-12 65.1
Msa0430540 AT4G18020.2 36.154 130 74 3 6 128 12 139 1.51e-13 68.2
Msa0430540 AT4G18020.2 49.091 55 28 0 129 183 293 347 2.30e-12 65.1
Msa0430540 AT4G18020.1 36.154 130 74 3 6 128 12 139 1.51e-13 68.2
Msa0430540 AT4G18020.1 49.091 55 28 0 129 183 293 347 2.30e-12 65.1
Msa0430540 AT4G18020.6 36.154 130 74 3 6 128 12 139 1.51e-13 68.2
Msa0430540 AT4G18020.6 49.091 55 28 0 129 183 293 347 2.30e-12 65.1
Msa0430540 AT4G18020.9 36.154 130 74 3 6 128 12 139 1.51e-13 68.2
Msa0430540 AT4G18020.9 49.091 55 28 0 129 183 293 347 2.30e-12 65.1
Msa0430540 AT2G40970.1 54.167 48 22 0 134 181 107 154 1.26e-12 64.7
Msa0430540 AT5G07210.2 31.667 120 79 2 12 130 16 133 1.77e-12 65.5
Msa0430540 AT5G59570.2 54.167 48 22 0 134 181 143 190 2.85e-12 63.9
Msa0430540 AT5G59570.1 54.167 48 22 0 134 181 143 190 2.85e-12 63.9
Msa0430540 AT3G46640.2 54.167 48 22 0 134 181 146 193 4.22e-12 63.9
Msa0430540 AT3G46640.1 54.167 48 22 0 134 181 146 193 4.22e-12 63.9
Msa0430540 AT3G46640.3 54.167 48 22 0 134 181 146 193 4.58e-12 63.5
Msa0430540 AT3G10760.1 52.083 48 23 0 134 181 107 154 1.21e-11 62.4
Msa0430540 AT5G05090.1 52.083 48 23 0 134 181 83 130 1.26e-11 62.0

Find 89 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCCCTCTCTCATGCTTT+TGG 0.251102 3_2:+82434130 Msa0430540:CDS
CAAAAGCTTGGAACCTAATA+AGG 0.257363 3_2:-82435386 None:intergenic
AAGGTCTTCAATATTATTTA+TGG 0.259242 3_2:-82435470 None:intergenic
GTCCCAGTTTGTTTGGTCTA+TGG 0.314039 3_2:+82434841 Msa0430540:CDS
CTGAAAAGAATGGATGGTTC+TGG 0.324289 3_2:+82435177 Msa0430540:three_prime_UTR
AAACGGGCTATATTTAGATT+TGG 0.324315 3_2:-82435535 None:intergenic
CTTGAAGCTGTTAATCAGTT+AGG 0.332985 3_2:+82434881 Msa0430540:CDS
GCCATGAGCATGTCCTTATT+AGG 0.333265 3_2:+82435373 Msa0430540:three_prime_UTR
TAGTAGAGAAGAGAGAATAA+TGG 0.351916 3_2:+82434052 Msa0430540:exon
GGAACTTGTGGGACTTGAAA+TGG 0.353940 3_2:+82434545 Msa0430540:CDS
TAAAAGAGCATTCTAATTTG+TGG 0.383501 3_2:-82435419 None:intergenic
AATGTTTCTGGTTTATGAAA+TGG 0.388291 3_2:+82435133 Msa0430540:three_prime_UTR
TCTGCTGAAACCTGTGAGAT+TGG 0.389884 3_2:+82434775 Msa0430540:CDS
TGGAGGAGCTAAGGAACATT+TGG 0.390210 3_2:+82434795 Msa0430540:CDS
TAGTTATTTGCTCGGTTTGT+GGG 0.390302 3_2:+82434029 None:intergenic
GTTCCATAGACCAAACAAAC+TGG 0.396655 3_2:-82434844 None:intergenic
CCGGAGTATATTCTGATTAA+CGG 0.398230 3_2:-82435281 None:intergenic
ATACGGAGTCCCAGTTTGTT+TGG 0.408262 3_2:+82434834 Msa0430540:CDS
ATTCTGATTAACGGGAGTTA+TGG 0.411464 3_2:-82435272 None:intergenic
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3_2:+82434704 Msa0430540:intron
AGTGATCAAATTAAACCATA+TGG 0.424198 3_2:-82435317 None:intergenic
AACTATCCCACTGGGTGAAA+AGG 0.434436 3_2:-82435226 None:intergenic
ACATTTGGCAGCATGTAATT+CGG 0.438242 3_2:+82434810 Msa0430540:CDS
GGAAGAAAATTGCAAAAGCT+TGG 0.440478 3_2:-82435398 None:intergenic
CGGAGTATATTCTGATTAAC+GGG 0.444913 3_2:-82435280 None:intergenic
GGTAATCTGAACGGGCAGTT+TGG 0.455986 3_2:+82435249 Msa0430540:three_prime_UTR
ATCTTAAGTCCATCCATGTC+AGG 0.460030 3_2:-82434519 None:intergenic
GCAGCATGTAATTCGGAATA+CGG 0.461939 3_2:+82434817 Msa0430540:CDS
CGGGCTATATTTAGATTTGG+AGG 0.465101 3_2:-82435532 None:intergenic
ACAATCTTTAGTTATTTGCT+CGG 0.473534 3_2:+82434021 None:intergenic
TTAGTTATTTGCTCGGTTTG+TGG 0.477221 3_2:+82434028 None:intergenic
CACAACTAGTAATGTAATAA+CGG 0.482381 3_2:+82434434 Msa0430540:CDS
TAGACTCTTTCTGAAAAGAA+TGG 0.483472 3_2:+82435167 Msa0430540:three_prime_UTR
GGATAGTTGGTAATCTGAAC+GGG 0.486215 3_2:+82435241 Msa0430540:three_prime_UTR
CGTTAATCAGAATATACTCC+GGG 0.488840 3_2:+82435282 Msa0430540:three_prime_UTR
ACTAGAAAAGTGCCTGGAGA+TGG 0.493120 3_2:-82435067 None:intergenic
CGTTATTACATTACTAGTTG+TGG 0.495202 3_2:-82434433 None:intergenic
CTTAGCTCCTCCAATCTCAC+AGG 0.496928 3_2:-82434785 None:intergenic
GGACATGGCGACCCATCTCC+AGG 0.501261 3_2:+82435055 Msa0430540:CDS
CAGAAAATCACGGGCACCGT+GGG 0.504818 3_2:-82434756 None:intergenic
CAGATTACCAACTATCCCAC+TGG 0.509046 3_2:-82435235 None:intergenic
GGGGAATGCCAATGTCCATA+TGG 0.518747 3_2:+82435302 Msa0430540:three_prime_UTR
TAGAGGACTAGAAAAGTGCC+TGG 0.518904 3_2:-82435073 None:intergenic
TGTGAACTTCAGCGATTACC+AGG 0.522457 3_2:-82434494 None:intergenic
CTAGAAAAGTGCCTGGAGAT+GGG 0.532146 3_2:-82435066 None:intergenic
TCCGATGGGAAATTGATCAC+TGG 0.542067 3_2:-82434081 None:intergenic
CTGTGAGATTGGAGGAGCTA+AGG 0.543793 3_2:+82434786 Msa0430540:CDS
CTCTTTCTGAAAAGAATGGA+TGG 0.549493 3_2:+82435171 Msa0430540:three_prime_UTR
ACTTAAGATGCTGGAACTTG+TGG 0.549864 3_2:+82434533 Msa0430540:CDS
ATTTAGATTTGGAGGGAGCA+AGG 0.549979 3_2:-82435524 None:intergenic
AGCGAGAACACGCATTCCGA+TGG 0.550357 3_2:-82434096 None:intergenic
CTTAAGATGCTGGAACTTGT+GGG 0.556277 3_2:+82434534 Msa0430540:CDS
GCTGAAACCTGTGAGATTGG+AGG 0.556603 3_2:+82434778 Msa0430540:CDS
TGCATATGGTGATACGGAGC+TGG 0.563561 3_2:+82434718 Msa0430540:CDS
GGGCTATATTTAGATTTGGA+GGG 0.573291 3_2:-82435531 None:intergenic
ATAAGGACATGCTCATGGCT+AGG 0.576667 3_2:-82435369 None:intergenic
CATGGATGGACTTAAGATGC+TGG 0.576704 3_2:+82434524 Msa0430540:CDS
ACCTAATAAGGACATGCTCA+TGG 0.580944 3_2:-82435374 None:intergenic
ATATGGACATTGGCATTCCC+CGG 0.581104 3_2:-82435300 None:intergenic
AAATTAAACCATATGGACAT+TGG 0.582977 3_2:-82435310 None:intergenic
TCCAGTGATCAATTTCCCAT+CGG 0.583447 3_2:+82434080 Msa0430540:CDS
GGGATAGTTGGTAATCTGAA+CGG 0.584367 3_2:+82435240 Msa0430540:three_prime_UTR
TCCAAAAGCATGAGAGAGGG+AGG 0.585485 3_2:-82434131 None:intergenic
TTGTATAAATTAAAGCATAG+AGG 0.585792 3_2:-82435090 None:intergenic
CAGGTTTCAGCAGAAAATCA+CGG 0.587467 3_2:-82434766 None:intergenic
TGATCACTTGCAAAACAGCA+AGG 0.595265 3_2:+82435332 Msa0430540:three_prime_UTR
GTTGTCTGCATATGGTGATA+CGG 0.598779 3_2:+82434712 Msa0430540:CDS
TGATACGGAGCTGGTGATGA+AGG 0.599556 3_2:+82434727 Msa0430540:CDS
AGTTTCCAAAAGCATGAGAG+AGG 0.600875 3_2:-82434135 None:intergenic
AAATCTTACAAGAGAGGACA+TGG 0.601706 3_2:+82435040 Msa0430540:CDS
CCGTTAATCAGAATATACTC+CGG 0.605300 3_2:+82435281 Msa0430540:three_prime_UTR
AGGTTTCAGCAGAAAATCAC+GGG 0.606322 3_2:-82434765 None:intergenic
GTTTCCAAAAGCATGAGAGA+GGG 0.606543 3_2:-82434134 None:intergenic
CCCACTTACTTATGACAGGA+AGG 0.611035 3_2:-82434569 None:intergenic
TTCCATAGACCAAACAAACT+GGG 0.611190 3_2:-82434843 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.611220 3_2:-82434095 None:intergenic
CACCGTGGTATTGACATGAT+CGG 0.615660 3_2:-82434163 None:intergenic
GTTCACATGCCTGACATGGA+TGG 0.616361 3_2:+82434510 Msa0430540:CDS
TAACAGCTTCAAGAAACTTG+CGG 0.617068 3_2:-82434871 None:intergenic
TGTTGAAAATCTTACAAGAG+AGG 0.626999 3_2:+82435034 Msa0430540:CDS
TGAAGTTCACATGCCTGACA+TGG 0.628648 3_2:+82434506 Msa0430540:CDS
GTGATGAAGGCAATTTCCCA+CGG 0.657007 3_2:+82434740 Msa0430540:CDS
AAACATAGACATGTTTGACC+TGG 0.663608 3_2:+82434476 Msa0430540:CDS
GTAAATATTAAAACAGAACA+AGG 0.664926 3_2:-82435489 None:intergenic
CTCCGATCATGTCAATACCA+CGG 0.677443 3_2:+82434161 Msa0430540:CDS
GCAGAAAATCACGGGCACCG+TGG 0.679138 3_2:-82434757 None:intergenic
AGATTACCAACTATCCCACT+GGG 0.681347 3_2:-82435234 None:intergenic
CGTGGTATTGACATGATCGG+AGG 0.690806 3_2:-82434160 None:intergenic
GTTAATCAGAATATACTCCG+GGG 0.763532 3_2:+82435283 Msa0430540:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCTATCTTTATTTATTTA+TGG + chr3_2:82434394-82434413 Msa0430540:intron 10.0%
!!! TATCTATCTTTATTTATTTA+TGG + chr3_2:82434394-82434413 Msa0430540:intron 10.0%
!! TTAGTATTATACACATAAAT+TGG - chr3_2:82434212-82434231 None:intergenic 15.0%
!! GTACAAAGTATAATAAAAAT+TGG - chr3_2:82434256-82434275 None:intergenic 15.0%
!!! TATCTTTATTTATTTATGGT+TGG + chr3_2:82434398-82434417 Msa0430540:intron 15.0%
!!! ATCTTTATTTATTTATGGTT+GGG + chr3_2:82434399-82434418 Msa0430540:intron 15.0%
!!! ATCAATTCAAAAATCTTTTT+GGG - chr3_2:82435011-82435030 None:intergenic 15.0%
!! TTAGTATTATACACATAAAT+TGG - chr3_2:82434212-82434231 None:intergenic 15.0%
!! GTACAAAGTATAATAAAAAT+TGG - chr3_2:82434256-82434275 None:intergenic 15.0%
!!! TATCTTTATTTATTTATGGT+TGG + chr3_2:82434398-82434417 Msa0430540:intron 15.0%
!!! ATCTTTATTTATTTATGGTT+GGG + chr3_2:82434399-82434418 Msa0430540:intron 15.0%
!!! ATCAATTCAAAAATCTTTTT+GGG - chr3_2:82435011-82435030 None:intergenic 15.0%
!!! TCTTTATTTATTTATGGTTG+GGG + chr3_2:82434400-82434419 Msa0430540:intron 20.0%
!!! ATAATGAAATTGTTTTAGTG+TGG - chr3_2:82434936-82434955 None:intergenic 20.0%
!!! CATCAATTCAAAAATCTTTT+TGG - chr3_2:82435012-82435031 None:intergenic 20.0%
!! TTGTATAAATTAAAGCATAG+AGG - chr3_2:82435093-82435112 None:intergenic 20.0%
!! AAGGTCTTCAATATTATTTA+TGG - chr3_2:82435473-82435492 None:intergenic 20.0%
!! GTAAATATTAAAACAGAACA+AGG - chr3_2:82435492-82435511 None:intergenic 20.0%
!!! TCTTTATTTATTTATGGTTG+GGG + chr3_2:82434400-82434419 Msa0430540:intron 20.0%
!!! ATAATGAAATTGTTTTAGTG+TGG - chr3_2:82434936-82434955 None:intergenic 20.0%
!!! CATCAATTCAAAAATCTTTT+TGG - chr3_2:82435012-82435031 None:intergenic 20.0%
!! TTGTATAAATTAAAGCATAG+AGG - chr3_2:82435093-82435112 None:intergenic 20.0%
!! AAGGTCTTCAATATTATTTA+TGG - chr3_2:82435473-82435492 None:intergenic 20.0%
!! GTAAATATTAAAACAGAACA+AGG - chr3_2:82435492-82435511 None:intergenic 20.0%
! CACAACTAGTAATGTAATAA+CGG + chr3_2:82434434-82434453 Msa0430540:CDS 25.0%
!!! TCATGTTAATGTTGTTTTAC+TGG + chr3_2:82434974-82434993 Msa0430540:intron 25.0%
!!! AATGTTTCTGGTTTATGAAA+TGG + chr3_2:82435133-82435152 Msa0430540:three_prime_UTR 25.0%
! AAATTAAACCATATGGACAT+TGG - chr3_2:82435313-82435332 None:intergenic 25.0%
! AGTGATCAAATTAAACCATA+TGG - chr3_2:82435320-82435339 None:intergenic 25.0%
!!! TAAAAGAGCATTCTAATTTG+TGG - chr3_2:82435422-82435441 None:intergenic 25.0%
! CACAACTAGTAATGTAATAA+CGG + chr3_2:82434434-82434453 Msa0430540:CDS 25.0%
!!! TCATGTTAATGTTGTTTTAC+TGG + chr3_2:82434974-82434993 Msa0430540:intron 25.0%
!!! AATGTTTCTGGTTTATGAAA+TGG + chr3_2:82435133-82435152 Msa0430540:three_prime_UTR 25.0%
! AAATTAAACCATATGGACAT+TGG - chr3_2:82435313-82435332 None:intergenic 25.0%
! AGTGATCAAATTAAACCATA+TGG - chr3_2:82435320-82435339 None:intergenic 25.0%
!!! TAAAAGAGCATTCTAATTTG+TGG - chr3_2:82435422-82435441 None:intergenic 25.0%
TAGTAGAGAAGAGAGAATAA+TGG + chr3_2:82434052-82434071 Msa0430540:exon 30.0%
!! TCAGAATCTCTATTTCTACA+TGG + chr3_2:82434293-82434312 Msa0430540:intron 30.0%
CGTTATTACATTACTAGTTG+TGG - chr3_2:82434436-82434455 None:intergenic 30.0%
TGTTGAAAATCTTACAAGAG+AGG + chr3_2:82435034-82435053 Msa0430540:CDS 30.0%
!!! ATTTTTTCGCTGAATGTTTC+TGG + chr3_2:82435121-82435140 Msa0430540:three_prime_UTR 30.0%
! TAGACTCTTTCTGAAAAGAA+TGG + chr3_2:82435167-82435186 Msa0430540:three_prime_UTR 30.0%
! AATGCTCTTTTATGTATGAG+AGG + chr3_2:82435430-82435449 Msa0430540:three_prime_UTR 30.0%
! ATGCTCTTTTATGTATGAGA+GGG + chr3_2:82435431-82435450 Msa0430540:three_prime_UTR 30.0%
TAGTAGAGAAGAGAGAATAA+TGG + chr3_2:82434052-82434071 Msa0430540:exon 30.0%
!! TCAGAATCTCTATTTCTACA+TGG + chr3_2:82434293-82434312 Msa0430540:intron 30.0%
CGTTATTACATTACTAGTTG+TGG - chr3_2:82434436-82434455 None:intergenic 30.0%
TGTTGAAAATCTTACAAGAG+AGG + chr3_2:82435034-82435053 Msa0430540:CDS 30.0%
!!! ATTTTTTCGCTGAATGTTTC+TGG + chr3_2:82435121-82435140 Msa0430540:three_prime_UTR 30.0%
! TAGACTCTTTCTGAAAAGAA+TGG + chr3_2:82435167-82435186 Msa0430540:three_prime_UTR 30.0%
! AATGCTCTTTTATGTATGAG+AGG + chr3_2:82435430-82435449 Msa0430540:three_prime_UTR 30.0%
! ATGCTCTTTTATGTATGAGA+GGG + chr3_2:82435431-82435450 Msa0430540:three_prime_UTR 30.0%
TATCAAAAAGAAACACACCG+TGG - chr3_2:82434181-82434200 None:intergenic 35.0%
ACTTTGTACCTGTTATTGCT+TGG + chr3_2:82434267-82434286 Msa0430540:intron 35.0%
! TCTGAAATCCAAGCAATAAC+AGG - chr3_2:82434278-82434297 None:intergenic 35.0%
AAACATAGACATGTTTGACC+TGG + chr3_2:82434476-82434495 Msa0430540:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG + chr3_2:82434704-82434723 Msa0430540:intron 35.0%
ACATTTGGCAGCATGTAATT+CGG + chr3_2:82434810-82434829 Msa0430540:CDS 35.0%
TTCCATAGACCAAACAAACT+GGG - chr3_2:82434846-82434865 None:intergenic 35.0%
TAACAGCTTCAAGAAACTTG+CGG - chr3_2:82434874-82434893 None:intergenic 35.0%
CTTGAAGCTGTTAATCAGTT+AGG + chr3_2:82434881-82434900 Msa0430540:CDS 35.0%
!!! TAATGTTGTTTTACTGGCAG+AGG + chr3_2:82434980-82434999 Msa0430540:intron 35.0%
AAATCTTACAAGAGAGGACA+TGG + chr3_2:82435040-82435059 Msa0430540:CDS 35.0%
! CTCTTTCTGAAAAGAATGGA+TGG + chr3_2:82435171-82435190 Msa0430540:three_prime_UTR 35.0%
ATTCTGATTAACGGGAGTTA+TGG - chr3_2:82435275-82435294 None:intergenic 35.0%
CGGAGTATATTCTGATTAAC+GGG - chr3_2:82435283-82435302 None:intergenic 35.0%
CCGGAGTATATTCTGATTAA+CGG - chr3_2:82435284-82435303 None:intergenic 35.0%
CCGTTAATCAGAATATACTC+CGG + chr3_2:82435281-82435300 Msa0430540:three_prime_UTR 35.0%
CGTTAATCAGAATATACTCC+GGG + chr3_2:82435282-82435301 Msa0430540:three_prime_UTR 35.0%
GTTAATCAGAATATACTCCG+GGG + chr3_2:82435283-82435302 Msa0430540:three_prime_UTR 35.0%
CAAAAGCTTGGAACCTAATA+AGG - chr3_2:82435389-82435408 None:intergenic 35.0%
GGAAGAAAATTGCAAAAGCT+TGG - chr3_2:82435401-82435420 None:intergenic 35.0%
GGGCTATATTTAGATTTGGA+GGG - chr3_2:82435534-82435553 None:intergenic 35.0%
TATCAAAAAGAAACACACCG+TGG - chr3_2:82434181-82434200 None:intergenic 35.0%
ACTTTGTACCTGTTATTGCT+TGG + chr3_2:82434267-82434286 Msa0430540:intron 35.0%
! TCTGAAATCCAAGCAATAAC+AGG - chr3_2:82434278-82434297 None:intergenic 35.0%
AAACATAGACATGTTTGACC+TGG + chr3_2:82434476-82434495 Msa0430540:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG + chr3_2:82434704-82434723 Msa0430540:intron 35.0%
ACATTTGGCAGCATGTAATT+CGG + chr3_2:82434810-82434829 Msa0430540:CDS 35.0%
TTCCATAGACCAAACAAACT+GGG - chr3_2:82434846-82434865 None:intergenic 35.0%
TAACAGCTTCAAGAAACTTG+CGG - chr3_2:82434874-82434893 None:intergenic 35.0%
CTTGAAGCTGTTAATCAGTT+AGG + chr3_2:82434881-82434900 Msa0430540:CDS 35.0%
!!! TAATGTTGTTTTACTGGCAG+AGG + chr3_2:82434980-82434999 Msa0430540:intron 35.0%
AAATCTTACAAGAGAGGACA+TGG + chr3_2:82435040-82435059 Msa0430540:CDS 35.0%
! CTCTTTCTGAAAAGAATGGA+TGG + chr3_2:82435171-82435190 Msa0430540:three_prime_UTR 35.0%
ATTCTGATTAACGGGAGTTA+TGG - chr3_2:82435275-82435294 None:intergenic 35.0%
CGGAGTATATTCTGATTAAC+GGG - chr3_2:82435283-82435302 None:intergenic 35.0%
CCGGAGTATATTCTGATTAA+CGG - chr3_2:82435284-82435303 None:intergenic 35.0%
CCGTTAATCAGAATATACTC+CGG + chr3_2:82435281-82435300 Msa0430540:three_prime_UTR 35.0%
CGTTAATCAGAATATACTCC+GGG + chr3_2:82435282-82435301 Msa0430540:three_prime_UTR 35.0%
GTTAATCAGAATATACTCCG+GGG + chr3_2:82435283-82435302 Msa0430540:three_prime_UTR 35.0%
CAAAAGCTTGGAACCTAATA+AGG - chr3_2:82435389-82435408 None:intergenic 35.0%
GGAAGAAAATTGCAAAAGCT+TGG - chr3_2:82435401-82435420 None:intergenic 35.0%
GGGCTATATTTAGATTTGGA+GGG - chr3_2:82435534-82435553 None:intergenic 35.0%
TCCAGTGATCAATTTCCCAT+CGG + chr3_2:82434080-82434099 Msa0430540:CDS 40.0%
! GTTTCCAAAAGCATGAGAGA+GGG - chr3_2:82434137-82434156 None:intergenic 40.0%
! AGTTTCCAAAAGCATGAGAG+AGG - chr3_2:82434138-82434157 None:intergenic 40.0%
ATCTTAAGTCCATCCATGTC+AGG - chr3_2:82434522-82434541 None:intergenic 40.0%
ACTTAAGATGCTGGAACTTG+TGG + chr3_2:82434533-82434552 Msa0430540:CDS 40.0%
CTTAAGATGCTGGAACTTGT+GGG + chr3_2:82434534-82434553 Msa0430540:CDS 40.0%
ACCTTCCTGTCATAAGTAAG+TGG + chr3_2:82434568-82434587 Msa0430540:intron 40.0%
CCTTCCTGTCATAAGTAAGT+GGG + chr3_2:82434569-82434588 Msa0430540:intron 40.0%
CTTCCTGTCATAAGTAAGTG+GGG + chr3_2:82434570-82434589 Msa0430540:intron 40.0%
TTCCTGTCATAAGTAAGTGG+GGG + chr3_2:82434571-82434590 Msa0430540:intron 40.0%
GTTGTCTGCATATGGTGATA+CGG + chr3_2:82434712-82434731 Msa0430540:CDS 40.0%
AGGTTTCAGCAGAAAATCAC+GGG - chr3_2:82434768-82434787 None:intergenic 40.0%
CAGGTTTCAGCAGAAAATCA+CGG - chr3_2:82434769-82434788 None:intergenic 40.0%
GCAGCATGTAATTCGGAATA+CGG + chr3_2:82434817-82434836 Msa0430540:CDS 40.0%
GTTCCATAGACCAAACAAAC+TGG - chr3_2:82434847-82434866 None:intergenic 40.0%
CTGAAAAGAATGGATGGTTC+TGG + chr3_2:82435177-82435196 Msa0430540:three_prime_UTR 40.0%
AGATTACCAACTATCCCACT+GGG - chr3_2:82435237-82435256 None:intergenic 40.0%
!! GGGATAGTTGGTAATCTGAA+CGG + chr3_2:82435240-82435259 Msa0430540:three_prime_UTR 40.0%
!! GGATAGTTGGTAATCTGAAC+GGG + chr3_2:82435241-82435260 Msa0430540:three_prime_UTR 40.0%
TGATCACTTGCAAAACAGCA+AGG + chr3_2:82435332-82435351 Msa0430540:three_prime_UTR 40.0%
ACCTAATAAGGACATGCTCA+TGG - chr3_2:82435377-82435396 None:intergenic 40.0%
ATTTAGATTTGGAGGGAGCA+AGG - chr3_2:82435527-82435546 None:intergenic 40.0%
CGGGCTATATTTAGATTTGG+AGG - chr3_2:82435535-82435554 None:intergenic 40.0%
TCCAGTGATCAATTTCCCAT+CGG + chr3_2:82434080-82434099 Msa0430540:CDS 40.0%
! GTTTCCAAAAGCATGAGAGA+GGG - chr3_2:82434137-82434156 None:intergenic 40.0%
! AGTTTCCAAAAGCATGAGAG+AGG - chr3_2:82434138-82434157 None:intergenic 40.0%
ATCTTAAGTCCATCCATGTC+AGG - chr3_2:82434522-82434541 None:intergenic 40.0%
ACTTAAGATGCTGGAACTTG+TGG + chr3_2:82434533-82434552 Msa0430540:CDS 40.0%
CTTAAGATGCTGGAACTTGT+GGG + chr3_2:82434534-82434553 Msa0430540:CDS 40.0%
ACCTTCCTGTCATAAGTAAG+TGG + chr3_2:82434568-82434587 Msa0430540:intron 40.0%
CCTTCCTGTCATAAGTAAGT+GGG + chr3_2:82434569-82434588 Msa0430540:intron 40.0%
CTTCCTGTCATAAGTAAGTG+GGG + chr3_2:82434570-82434589 Msa0430540:intron 40.0%
TTCCTGTCATAAGTAAGTGG+GGG + chr3_2:82434571-82434590 Msa0430540:intron 40.0%
GTTGTCTGCATATGGTGATA+CGG + chr3_2:82434712-82434731 Msa0430540:CDS 40.0%
AGGTTTCAGCAGAAAATCAC+GGG - chr3_2:82434768-82434787 None:intergenic 40.0%
CAGGTTTCAGCAGAAAATCA+CGG - chr3_2:82434769-82434788 None:intergenic 40.0%
GCAGCATGTAATTCGGAATA+CGG + chr3_2:82434817-82434836 Msa0430540:CDS 40.0%
GTTCCATAGACCAAACAAAC+TGG - chr3_2:82434847-82434866 None:intergenic 40.0%
CTGAAAAGAATGGATGGTTC+TGG + chr3_2:82435177-82435196 Msa0430540:three_prime_UTR 40.0%
AGATTACCAACTATCCCACT+GGG - chr3_2:82435237-82435256 None:intergenic 40.0%
!! GGGATAGTTGGTAATCTGAA+CGG + chr3_2:82435240-82435259 Msa0430540:three_prime_UTR 40.0%
!! GGATAGTTGGTAATCTGAAC+GGG + chr3_2:82435241-82435260 Msa0430540:three_prime_UTR 40.0%
TGATCACTTGCAAAACAGCA+AGG + chr3_2:82435332-82435351 Msa0430540:three_prime_UTR 40.0%
ACCTAATAAGGACATGCTCA+TGG - chr3_2:82435377-82435396 None:intergenic 40.0%
ATTTAGATTTGGAGGGAGCA+AGG - chr3_2:82435527-82435546 None:intergenic 40.0%
CGGGCTATATTTAGATTTGG+AGG - chr3_2:82435535-82435554 None:intergenic 40.0%
TCCGATGGGAAATTGATCAC+TGG - chr3_2:82434084-82434103 None:intergenic 45.0%
CTCCGATCATGTCAATACCA+CGG + chr3_2:82434161-82434180 Msa0430540:CDS 45.0%
!! CACCGTGGTATTGACATGAT+CGG - chr3_2:82434166-82434185 None:intergenic 45.0%
TGTGAACTTCAGCGATTACC+AGG - chr3_2:82434497-82434516 None:intergenic 45.0%
TGAAGTTCACATGCCTGACA+TGG + chr3_2:82434506-82434525 Msa0430540:CDS 45.0%
! CATGGATGGACTTAAGATGC+TGG + chr3_2:82434524-82434543 Msa0430540:CDS 45.0%
GGAACTTGTGGGACTTGAAA+TGG + chr3_2:82434545-82434564 Msa0430540:CDS 45.0%
CCCACTTACTTATGACAGGA+AGG - chr3_2:82434572-82434591 None:intergenic 45.0%
ATCCCCCACTTACTTATGAC+AGG - chr3_2:82434576-82434595 None:intergenic 45.0%
GTGATGAAGGCAATTTCCCA+CGG + chr3_2:82434740-82434759 Msa0430540:CDS 45.0%
TCTGCTGAAACCTGTGAGAT+TGG + chr3_2:82434775-82434794 Msa0430540:CDS 45.0%
TGGAGGAGCTAAGGAACATT+TGG + chr3_2:82434795-82434814 Msa0430540:CDS 45.0%
! ATACGGAGTCCCAGTTTGTT+TGG + chr3_2:82434834-82434853 Msa0430540:CDS 45.0%
! GTCCCAGTTTGTTTGGTCTA+TGG + chr3_2:82434841-82434860 Msa0430540:CDS 45.0%
!! CTAGAAAAGTGCCTGGAGAT+GGG - chr3_2:82435069-82435088 None:intergenic 45.0%
!! ACTAGAAAAGTGCCTGGAGA+TGG - chr3_2:82435070-82435089 None:intergenic 45.0%
!! TAGAGGACTAGAAAAGTGCC+TGG - chr3_2:82435076-82435095 None:intergenic 45.0%
! TTCAGATCCTTTTCACCCAG+TGG + chr3_2:82435219-82435238 Msa0430540:three_prime_UTR 45.0%
! TCAGATCCTTTTCACCCAGT+GGG + chr3_2:82435220-82435239 Msa0430540:three_prime_UTR 45.0%
AACTATCCCACTGGGTGAAA+AGG - chr3_2:82435229-82435248 None:intergenic 45.0%
! TTTTCACCCAGTGGGATAGT+TGG + chr3_2:82435228-82435247 Msa0430540:three_prime_UTR 45.0%
CAGATTACCAACTATCCCAC+TGG - chr3_2:82435238-82435257 None:intergenic 45.0%
ATATGGACATTGGCATTCCC+CGG - chr3_2:82435303-82435322 None:intergenic 45.0%
ATAAGGACATGCTCATGGCT+AGG - chr3_2:82435372-82435391 None:intergenic 45.0%
GCCATGAGCATGTCCTTATT+AGG + chr3_2:82435373-82435392 Msa0430540:three_prime_UTR 45.0%
TCCGATGGGAAATTGATCAC+TGG - chr3_2:82434084-82434103 None:intergenic 45.0%
CTCCGATCATGTCAATACCA+CGG + chr3_2:82434161-82434180 Msa0430540:CDS 45.0%
!! CACCGTGGTATTGACATGAT+CGG - chr3_2:82434166-82434185 None:intergenic 45.0%
TGTGAACTTCAGCGATTACC+AGG - chr3_2:82434497-82434516 None:intergenic 45.0%
TGAAGTTCACATGCCTGACA+TGG + chr3_2:82434506-82434525 Msa0430540:CDS 45.0%
! CATGGATGGACTTAAGATGC+TGG + chr3_2:82434524-82434543 Msa0430540:CDS 45.0%
GGAACTTGTGGGACTTGAAA+TGG + chr3_2:82434545-82434564 Msa0430540:CDS 45.0%
CCCACTTACTTATGACAGGA+AGG - chr3_2:82434572-82434591 None:intergenic 45.0%
ATCCCCCACTTACTTATGAC+AGG - chr3_2:82434576-82434595 None:intergenic 45.0%
GTGATGAAGGCAATTTCCCA+CGG + chr3_2:82434740-82434759 Msa0430540:CDS 45.0%
TCTGCTGAAACCTGTGAGAT+TGG + chr3_2:82434775-82434794 Msa0430540:CDS 45.0%
TGGAGGAGCTAAGGAACATT+TGG + chr3_2:82434795-82434814 Msa0430540:CDS 45.0%
! ATACGGAGTCCCAGTTTGTT+TGG + chr3_2:82434834-82434853 Msa0430540:CDS 45.0%
! GTCCCAGTTTGTTTGGTCTA+TGG + chr3_2:82434841-82434860 Msa0430540:CDS 45.0%
!! CTAGAAAAGTGCCTGGAGAT+GGG - chr3_2:82435069-82435088 None:intergenic 45.0%
!! ACTAGAAAAGTGCCTGGAGA+TGG - chr3_2:82435070-82435089 None:intergenic 45.0%
!! TAGAGGACTAGAAAAGTGCC+TGG - chr3_2:82435076-82435095 None:intergenic 45.0%
! TTCAGATCCTTTTCACCCAG+TGG + chr3_2:82435219-82435238 Msa0430540:three_prime_UTR 45.0%
! TCAGATCCTTTTCACCCAGT+GGG + chr3_2:82435220-82435239 Msa0430540:three_prime_UTR 45.0%
AACTATCCCACTGGGTGAAA+AGG - chr3_2:82435229-82435248 None:intergenic 45.0%
! TTTTCACCCAGTGGGATAGT+TGG + chr3_2:82435228-82435247 Msa0430540:three_prime_UTR 45.0%
CAGATTACCAACTATCCCAC+TGG - chr3_2:82435238-82435257 None:intergenic 45.0%
ATATGGACATTGGCATTCCC+CGG - chr3_2:82435303-82435322 None:intergenic 45.0%
ATAAGGACATGCTCATGGCT+AGG - chr3_2:82435372-82435391 None:intergenic 45.0%
GCCATGAGCATGTCCTTATT+AGG + chr3_2:82435373-82435392 Msa0430540:three_prime_UTR 45.0%
! TCCTCCCTCTCTCATGCTTT+TGG + chr3_2:82434130-82434149 Msa0430540:CDS 50.0%
! TCCAAAAGCATGAGAGAGGG+AGG - chr3_2:82434134-82434153 None:intergenic 50.0%
!! CGTGGTATTGACATGATCGG+AGG - chr3_2:82434163-82434182 None:intergenic 50.0%
GTTCACATGCCTGACATGGA+TGG + chr3_2:82434510-82434529 Msa0430540:CDS 50.0%
TGCATATGGTGATACGGAGC+TGG + chr3_2:82434718-82434737 Msa0430540:CDS 50.0%
! TGATACGGAGCTGGTGATGA+AGG + chr3_2:82434727-82434746 Msa0430540:CDS 50.0%
GCTGAAACCTGTGAGATTGG+AGG + chr3_2:82434778-82434797 Msa0430540:CDS 50.0%
CTTAGCTCCTCCAATCTCAC+AGG - chr3_2:82434788-82434807 None:intergenic 50.0%
CTGTGAGATTGGAGGAGCTA+AGG + chr3_2:82434786-82434805 Msa0430540:CDS 50.0%
GGTAATCTGAACGGGCAGTT+TGG + chr3_2:82435249-82435268 Msa0430540:three_prime_UTR 50.0%
GGGGAATGCCAATGTCCATA+TGG + chr3_2:82435302-82435321 Msa0430540:three_prime_UTR 50.0%
! TCCTCCCTCTCTCATGCTTT+TGG + chr3_2:82434130-82434149 Msa0430540:CDS 50.0%
! TCCAAAAGCATGAGAGAGGG+AGG - chr3_2:82434134-82434153 None:intergenic 50.0%
!! CGTGGTATTGACATGATCGG+AGG - chr3_2:82434163-82434182 None:intergenic 50.0%
GTTCACATGCCTGACATGGA+TGG + chr3_2:82434510-82434529 Msa0430540:CDS 50.0%
TGCATATGGTGATACGGAGC+TGG + chr3_2:82434718-82434737 Msa0430540:CDS 50.0%
! TGATACGGAGCTGGTGATGA+AGG + chr3_2:82434727-82434746 Msa0430540:CDS 50.0%
GCTGAAACCTGTGAGATTGG+AGG + chr3_2:82434778-82434797 Msa0430540:CDS 50.0%
CTTAGCTCCTCCAATCTCAC+AGG - chr3_2:82434788-82434807 None:intergenic 50.0%
CTGTGAGATTGGAGGAGCTA+AGG + chr3_2:82434786-82434805 Msa0430540:CDS 50.0%
GGTAATCTGAACGGGCAGTT+TGG + chr3_2:82435249-82435268 Msa0430540:three_prime_UTR 50.0%
GGGGAATGCCAATGTCCATA+TGG + chr3_2:82435302-82435321 Msa0430540:three_prime_UTR 50.0%
GCGAGAACACGCATTCCGAT+GGG - chr3_2:82434098-82434117 None:intergenic 55.0%
AGCGAGAACACGCATTCCGA+TGG - chr3_2:82434099-82434118 None:intergenic 55.0%
! CAGAAAATCACGGGCACCGT+GGG - chr3_2:82434759-82434778 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG - chr3_2:82434098-82434117 None:intergenic 55.0%
AGCGAGAACACGCATTCCGA+TGG - chr3_2:82434099-82434118 None:intergenic 55.0%
! CAGAAAATCACGGGCACCGT+GGG - chr3_2:82434759-82434778 None:intergenic 55.0%
! GCAGAAAATCACGGGCACCG+TGG - chr3_2:82434760-82434779 None:intergenic 60.0%
! GCAGAAAATCACGGGCACCG+TGG - chr3_2:82434760-82434779 None:intergenic 60.0%
GGACATGGCGACCCATCTCC+AGG + chr3_2:82435055-82435074 Msa0430540:CDS 65.0%
GGACATGGCGACCCATCTCC+AGG + chr3_2:82435055-82435074 Msa0430540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 82434031 82435555 82434031 ID=Msa0430540;Name=Msa0430540
chr3_2 mRNA 82434031 82435555 82434031 ID=Msa0430540-mRNA-1;Parent=Msa0430540;Name=Msa0430540-mRNA-1;_AED=0.29;_eAED=0.29;_QI=40|1|1|1|1|1|4|467|184
chr3_2 exon 82434031 82434182 82434031 ID=Msa0430540-mRNA-1:exon:22865;Parent=Msa0430540-mRNA-1
chr3_2 exon 82434430 82434582 82434430 ID=Msa0430540-mRNA-1:exon:22866;Parent=Msa0430540-mRNA-1
chr3_2 exon 82434711 82434911 82434711 ID=Msa0430540-mRNA-1:exon:22867;Parent=Msa0430540-mRNA-1
chr3_2 exon 82435000 82435555 82435000 ID=Msa0430540-mRNA-1:exon:22868;Parent=Msa0430540-mRNA-1
chr3_2 five_prime_UTR 82434031 82434070 82434031 ID=Msa0430540-mRNA-1:five_prime_utr;Parent=Msa0430540-mRNA-1
chr3_2 CDS 82434071 82434182 82434071 ID=Msa0430540-mRNA-1:cds;Parent=Msa0430540-mRNA-1
chr3_2 CDS 82434430 82434582 82434430 ID=Msa0430540-mRNA-1:cds;Parent=Msa0430540-mRNA-1
chr3_2 CDS 82434711 82434911 82434711 ID=Msa0430540-mRNA-1:cds;Parent=Msa0430540-mRNA-1
chr3_2 CDS 82435000 82435088 82435000 ID=Msa0430540-mRNA-1:cds;Parent=Msa0430540-mRNA-1
chr3_2 three_prime_UTR 82435089 82435555 82435089 ID=Msa0430540-mRNA-1:three_prime_utr;Parent=Msa0430540-mRNA-1
Gene Sequence

>Msa0430540

ATGGATGATTCCAGTGATCAATTTCCCATCGGAATGCGTGTTCTCGCTGTCGACGACGATCCTCCCTCTCTCATGCTTTTGGAAACTCTCCTCCGATCATGTCAATACCACGTAACCACAACTAGTAATGTAATAACGGCATTGACTATGTTGCGAGAAAACATAGACATGTTTGACCTGGTAATCGCTGAAGTTCACATGCCTGACATGGATGGACTTAAGATGCTGGAACTTGTGGGACTTGAAATGGACCTTCCTGTCATAATGTTGTCTGCATATGGTGATACGGAGCTGGTGATGAAGGCAATTTCCCACGGTGCCCGTGATTTTCTGCTGAAACCTGTGAGATTGGAGGAGCTAAGGAACATTTGGCAGCATGTAATTCGGAATACGGAGTCCCAGTTTGTTTGGTCTATGGAACTGCACCGCAAGTTTCTTGAAGCTGTTAATCAGTTAGGAGTTGACAAGGCTGTACCCAAAAAGATTTTTGAATTGATGAATGTTGAAAATCTTACAAGAGAGGACATGGCGACCCATCTCCAGGCACTTTTCTAG
Protein sequence

>Msa0430540

MDDSSDQFPIGMRVLAVDDDPPSLMLLETLLRSCQYHVTTTSNVITALTMLRENIDMFDLVIAEVHMPDMDGLKMLELVGLEMDLPVIMLSAYGDTELVMKAISHGARDFLLKPVRLEELRNIWQHVIRNTESQFVWSMELHRKFLEAVNQLGVDKAVPKKIFELMNVENLTREDMATHLQALF*