AlfalfaGEDB | Msa0381850

M. sativa cultivar zhongmu-4 / Msa0381850

KEGG: -
GO: GO:0001101 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0042221 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0098542 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0381850	XP_003603180.2	94.048	168	10	0	10	177	5	172	1.13e-103	305

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0381850	sp\|Q8VWQ5\|WRK50_ARATH	83.333	72	12	0	104	175	100	171	4.44e-40	136

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0381850	G7J8C4	95.122	164	8	0	14	177	1	164	6.86e-103	301

TFs/TRs:

Gene ID	Type	Classification
Msa0381850	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0381850	Msa0586380	0.800478	1.414151e-48	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0381850	MtrunA17_Chr1g0150801	60.355	169	53	7	14	176	1	161	7.31e-60	183
Msa0381850	MtrunA17_Chr3g0136001	92.105	76	6	0	10	85	5	80	1.59e-36	122
Msa0381850	MtrunA17_Chr8g0383251	48.052	154	66	5	22	173	23	164	1.80e-35	122
Msa0381850	MtrunA17_Chr7g0270191	59.756	82	33	0	92	173	120	201	6.45e-31	113
Msa0381850	MtrunA17_Chr3g0129321	42.938	177	66	8	18	175	16	176	6.62e-31	111
Msa0381850	MtrunA17_Chr1g0194481	61.905	84	32	0	92	175	133	216	7.51e-31	114
Msa0381850	MtrunA17_Chr5g0418781	66.250	80	26	1	94	173	102	180	2.35e-30	111
Msa0381850	MtrunA17_Chr2g0294231	68.000	75	24	0	101	175	187	261	8.48e-30	112
Msa0381850	MtrunA17_Chr3g0129361	60.811	74	29	0	100	173	127	200	1.15e-29	108
Msa0381850	MtrunA17_Chr4g0051881	67.143	70	23	0	104	173	165	234	5.30e-29	109
Msa0381850	MtrunA17_Chr4g0068541	64.000	75	27	0	101	175	192	266	6.23e-29	110
Msa0381850	MtrunA17_Chr8g0386241	52.222	90	37	1	84	173	76	159	7.60e-28	102
Msa0381850	MtrunA17_Chr5g0443131	65.714	70	24	0	104	173	144	213	7.63e-28	105
Msa0381850	MtrunA17_Chr5g0445311	59.211	76	31	0	98	173	345	420	1.17e-27	108
Msa0381850	MtrunA17_Chr5g0445311	50.877	57	27	1	117	173	200	255	6.47e-11	60.1
Msa0381850	MtrunA17_Chr3g0101131	60.526	76	30	0	98	173	396	471	1.79e-27	107
Msa0381850	MtrunA17_Chr3g0101131	50.877	57	27	1	117	173	243	298	1.72e-11	61.6
Msa0381850	MtrunA17_Chr8g0335811	46.729	107	51	1	73	173	104	210	2.08e-27	102
Msa0381850	MtrunA17_Chr8g0383351	58.667	75	30	1	100	173	142	216	2.26e-27	102
Msa0381850	MtrunA17_Chr3g0106491	53.261	92	42	1	82	173	331	421	3.05e-27	106
Msa0381850	MtrunA17_Chr3g0106491	46.479	71	33	2	107	173	184	253	6.77e-15	71.6
Msa0381850	MtrunA17_Chr3g0079691	58.228	79	33	0	95	173	473	551	3.44e-27	107
Msa0381850	MtrunA17_Chr3g0079691	49.123	57	28	1	117	173	280	335	2.26e-11	61.6
Msa0381850	MtrunA17_Chr7g0224801	63.235	68	25	0	106	173	82	149	4.12e-27	100
Msa0381850	MtrunA17_Chr7g0218081	55.844	77	34	0	97	173	390	466	5.37e-27	106
Msa0381850	MtrunA17_Chr7g0218081	50.877	57	27	1	117	173	228	283	8.71e-12	62.8
Msa0381850	MtrunA17_Chr4g0004911	55.263	76	34	0	98	173	317	392	3.49e-26	103
Msa0381850	MtrunA17_Chr4g0004911	50.877	57	28	0	117	173	184	240	4.15e-15	72.0
Msa0381850	MtrunA17_Chr5g0432161	51.163	86	42	0	88	173	392	477	4.09e-26	103
Msa0381850	MtrunA17_Chr5g0432161	52.632	57	26	1	117	173	244	299	5.11e-14	68.9
Msa0381850	MtrunA17_Chr5g0418191	55.263	76	34	0	98	173	301	376	4.43e-26	102
Msa0381850	MtrunA17_Chr5g0418191	51.724	58	27	1	117	174	151	207	9.33e-13	65.5
Msa0381850	MtrunA17_Chr7g0243891	55.263	76	34	0	98	173	355	430	1.73e-25	102
Msa0381850	MtrunA17_Chr7g0243891	54.386	57	25	1	117	173	216	271	1.45e-14	70.9
Msa0381850	MtrunA17_Chr7g0249311	52.632	76	36	0	98	173	373	448	3.09e-25	101
Msa0381850	MtrunA17_Chr7g0249311	44.048	84	39	3	94	177	163	238	9.92e-14	68.2
Msa0381850	MtrunA17_Chr7g0249301	50.649	77	38	0	97	173	272	348	7.18e-25	99.0
Msa0381850	MtrunA17_Chr7g0249301	46.250	80	35	3	94	173	46	117	3.61e-13	66.2
Msa0381850	MtrunA17_Chr4g0042831	55.714	70	31	0	104	173	265	334	7.22e-24	96.3
Msa0381850	MtrunA17_Chr4g0042831	49.123	57	29	0	117	173	145	201	1.24e-12	65.1
Msa0381850	MtrunA17_Chr5g0447701	60.000	70	28	0	104	173	239	308	3.25e-23	94.7
Msa0381850	MtrunA17_Chr4g0075201	50.667	75	36	1	100	173	250	324	4.31e-23	95.1
Msa0381850	MtrunA17_Chr7g0263531	53.623	69	32	0	105	173	349	417	1.58e-22	93.2
Msa0381850	MtrunA17_Chr7g0263531	51.786	56	26	1	118	173	190	244	2.74e-12	63.9
Msa0381850	MtrunA17_Chr1g0189391	54.167	72	32	1	103	173	83	154	2.76e-22	91.3
Msa0381850	MtrunA17_Chr7g0248721	55.844	77	33	1	97	173	121	196	4.76e-22	88.6
Msa0381850	MtrunA17_Chr3g0099641	43.529	85	47	1	90	173	224	308	6.27e-22	91.7
Msa0381850	MtrunA17_Chr4g0051181	51.351	74	35	1	101	173	227	300	8.04e-22	91.3
Msa0381850	MtrunA17_Chr7g0238921	61.017	59	23	0	117	175	124	182	2.58e-21	88.6
Msa0381850	MtrunA17_Chr7g0270831	49.296	71	35	1	104	173	203	273	3.89e-21	89.4
Msa0381850	MtrunA17_Chr5g0401821	40.678	118	63	3	57	173	145	256	1.40e-20	85.9
Msa0381850	MtrunA17_Chr2g0333851	52.055	73	32	2	104	173	154	226	1.88e-20	86.3
Msa0381850	MtrunA17_Chr1g0188941	46.575	73	39	0	101	173	35	107	2.18e-20	81.6
Msa0381850	MtrunA17_Chr4g0074001	54.286	70	32	0	104	173	346	415	2.49e-20	87.4
Msa0381850	MtrunA17_Chr7g0216891	50.704	71	34	1	104	173	206	276	6.89e-20	85.9
Msa0381850	MtrunA17_Chr4g0060271	43.750	80	44	1	95	173	233	312	8.31e-20	85.9
Msa0381850	MtrunA17_Chr6g0485431	49.296	71	35	1	104	173	141	211	2.79e-19	83.6
Msa0381850	MtrunA17_Chr2g0302391	41.758	91	52	1	84	173	178	268	2.90e-19	84.0
Msa0381850	MtrunA17_Chr2g0288871	40.404	99	58	1	76	173	264	362	5.47e-19	83.6
Msa0381850	MtrunA17_Chr1g0147881	48.718	78	36	2	97	173	245	319	1.50e-18	81.3
Msa0381850	MtrunA17_Chr1g0150281	44.737	76	39	2	101	173	122	197	4.22e-18	79.3
Msa0381850	MtrunA17_Chr2g0322391	48.000	75	38	1	100	173	332	406	6.53e-18	80.5
Msa0381850	MtrunA17_Chr3g0136961	50.847	59	28	1	116	173	137	195	1.19e-17	78.2
Msa0381850	MtrunA17_Chr4g0053281	46.154	78	38	2	97	173	249	323	1.55e-17	78.6
Msa0381850	MtrunA17_Chr4g0025051	38.679	106	57	2	76	173	287	392	1.64e-17	79.3
Msa0381850	MtrunA17_Chr4g0001361	51.667	60	28	1	115	173	160	219	4.86e-17	77.0
Msa0381850	MtrunA17_Chr4g0025061	47.887	71	36	1	104	173	347	417	8.05e-17	77.4
Msa0381850	MtrunA17_Chr4g0071521	47.436	78	37	2	97	173	228	302	8.71e-17	76.3
Msa0381850	MtrunA17_Chr1g0184691	45.946	74	39	1	101	173	277	350	1.22e-16	76.3
Msa0381850	MtrunA17_Chr8g0348311	42.353	85	46	3	90	173	130	212	3.03e-16	75.1
Msa0381850	MtrunA17_Chr5g0447711	46.377	69	37	0	105	173	218	286	6.48e-16	73.9
Msa0381850	MtrunA17_Chr2g0293481	39.000	100	56	3	79	173	225	324	1.80e-15	73.2
Msa0381850	MtrunA17_Chr3g0139021	37.624	101	58	2	74	173	275	371	1.96e-15	72.8
Msa0381850	MtrunA17_Chr7g0270051	56.140	57	24	1	118	173	54	110	2.80e-15	71.6
Msa0381850	MtrunA17_Chr1g0150271	45.000	60	32	1	115	173	99	158	4.36e-15	70.9
Msa0381850	MtrunA17_Chr7g0228941	47.619	63	32	1	114	175	49	111	1.12e-14	67.0
Msa0381850	MtrunA17_Chr8g0379461	52.632	57	26	1	118	173	77	133	3.28e-14	68.2
Msa0381850	MtrunA17_Chr7g0248691	41.573	89	50	2	87	173	123	211	4.54e-14	68.9
Msa0381850	MtrunA17_Chr8g0387501	50.847	59	28	1	116	173	128	186	7.40e-14	67.8
Msa0381850	MtrunA17_Chr2g0319961	46.269	67	35	1	108	173	71	137	1.46e-13	66.6
Msa0381850	MtrunA17_Chr4g0024391	34.653	101	58	2	76	168	181	281	1.54e-13	67.8
Msa0381850	MtrunA17_Chr3g0126391	48.333	60	28	1	116	172	132	191	4.71e-13	65.9
Msa0381850	MtrunA17_Chr2g0284321	49.123	57	28	1	118	173	36	92	5.80e-13	64.3
Msa0381850	MtrunA17_Chr5g0432071	49.123	57	28	1	117	173	104	159	1.60e-12	63.2
Msa0381850	MtrunA17_Chr1g0202461	50.877	57	27	1	118	173	262	318	2.67e-12	63.9
Msa0381850	MtrunA17_Chr5g0419241	46.667	45	24	0	100	144	60	104	3.28e-12	60.1
Msa0381850	MtrunA17_Chr2g0315361	43.662	71	37	1	110	177	141	211	1.03e-11	62.0
Msa0381850	MtrunA17_Chr2g0289181	44.444	63	34	1	112	173	9	71	1.04e-11	61.2
Msa0381850	MtrunA17_Chr7g0244981	47.458	59	28	1	117	172	122	180	2.93e-11	60.5
Msa0381850	MtrunA17_Chr2g0315381	31.776	107	66	3	69	172	100	202	3.49e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0381850	AT5G26170.1	83.333	72	12	0	104	175	100	171	4.51e-41	136
Msa0381850	AT5G64810.1	43.373	166	79	4	14	175	14	168	8.20e-39	131
Msa0381850	AT2G47260.1	63.095	84	31	0	92	175	149	232	1.54e-32	119
Msa0381850	AT4G18170.1	55.340	103	40	1	71	173	132	228	3.81e-31	115
Msa0381850	AT4G39410.1	62.338	77	29	0	97	173	203	279	6.95e-31	114
Msa0381850	AT1G69310.4	65.000	80	28	0	94	173	124	203	7.35e-31	113
Msa0381850	AT1G69310.2	65.000	80	28	0	94	173	124	203	7.35e-31	113
Msa0381850	AT1G69310.1	65.000	80	28	0	94	173	124	203	7.35e-31	113
Msa0381850	AT5G49520.1	68.493	73	23	0	101	173	205	277	9.25e-31	115
Msa0381850	AT1G29860.1	67.123	73	24	0	101	173	120	192	3.48e-30	111
Msa0381850	AT3G62340.1	63.855	83	28	1	91	173	94	174	5.10e-29	108
Msa0381850	AT2G44745.1	56.250	80	35	0	97	176	125	204	1.24e-28	106
Msa0381850	AT4G26640.5	60.526	76	30	0	98	173	186	261	6.89e-28	107
Msa0381850	AT4G26640.5	49.153	59	29	1	115	173	33	90	2.80e-11	61.2
Msa0381850	AT4G26640.6	60.526	76	30	0	98	173	186	261	6.89e-28	107
Msa0381850	AT4G26640.6	49.153	59	29	1	115	173	33	90	2.80e-11	61.2
Msa0381850	AT4G26640.4	60.526	76	30	0	98	173	186	261	6.89e-28	107
Msa0381850	AT4G26640.4	49.153	59	29	1	115	173	33	90	2.80e-11	61.2
Msa0381850	AT4G26640.3	60.526	76	30	0	98	173	186	261	6.89e-28	107
Msa0381850	AT4G26640.3	49.153	59	29	1	115	173	33	90	2.80e-11	61.2
Msa0381850	AT4G26640.1	60.526	76	30	0	98	173	290	365	9.39e-28	108
Msa0381850	AT4G26640.1	49.153	59	29	1	115	173	137	194	2.19e-11	62.0
Msa0381850	AT4G26640.7	60.526	76	30	0	98	173	322	397	9.43e-28	108
Msa0381850	AT4G26640.7	49.153	59	29	1	115	173	169	226	2.05e-11	62.0
Msa0381850	AT4G26640.2	60.526	76	30	0	98	173	362	437	1.14e-27	108
Msa0381850	AT4G26640.2	49.153	59	29	1	115	173	209	266	2.05e-11	62.0
Msa0381850	AT3G01970.1	60.000	70	28	0	104	173	52	121	1.85e-27	101
Msa0381850	AT5G46350.1	64.286	70	25	0	104	173	170	239	1.88e-27	105
Msa0381850	AT1G64000.1	53.012	83	38	1	92	173	88	170	2.93e-27	102
Msa0381850	AT5G13080.1	60.000	70	28	0	104	173	54	123	6.62e-27	99.8
Msa0381850	AT5G07100.2	56.757	74	32	0	100	173	124	197	6.64e-27	101
Msa0381850	AT5G07100.2	45.614	57	31	0	117	173	24	80	1.78e-12	63.5
Msa0381850	AT5G07100.4	56.757	74	32	0	100	173	124	197	6.64e-27	101
Msa0381850	AT5G07100.4	45.614	57	31	0	117	173	24	80	1.78e-12	63.5
Msa0381850	AT5G07100.5	56.757	74	32	0	100	173	124	197	6.64e-27	101
Msa0381850	AT5G07100.5	45.614	57	31	0	117	173	24	80	1.78e-12	63.5
Msa0381850	AT5G07100.3	56.757	74	32	0	100	173	124	197	6.64e-27	101
Msa0381850	AT5G07100.3	45.614	57	31	0	117	173	24	80	1.78e-12	63.5
Msa0381850	AT5G56270.1	56.962	79	34	0	95	173	465	543	9.00e-27	106
Msa0381850	AT5G56270.1	51.724	58	27	1	117	174	273	329	4.96e-13	66.6
Msa0381850	AT5G07100.1	56.757	74	32	0	100	173	217	290	1.53e-26	102
Msa0381850	AT5G07100.1	45.614	57	31	0	117	173	117	173	2.38e-12	64.3
Msa0381850	AT4G26440.1	53.750	80	37	0	95	174	350	429	7.42e-26	103
Msa0381850	AT4G26440.1	48.276	58	27	2	117	173	178	233	1.12e-11	62.8
Msa0381850	AT1G69310.3	61.250	80	27	1	94	173	124	199	1.03e-25	100
Msa0381850	AT2G46130.1	51.190	84	41	0	90	173	3	86	1.39e-25	95.1
Msa0381850	AT1G13960.1	52.632	76	36	0	98	173	390	465	1.54e-25	102
Msa0381850	AT1G13960.1	54.386	57	25	1	117	173	229	284	1.54e-13	68.2
Msa0381850	AT5G41570.1	53.333	90	38	2	88	173	65	154	1.55e-25	97.1
Msa0381850	AT1G13960.2	52.632	76	36	0	98	173	237	312	1.63e-25	100
Msa0381850	AT1G13960.2	54.386	57	25	1	117	173	76	131	2.60e-13	67.0
Msa0381850	AT2G38470.1	55.263	76	34	0	98	173	343	418	1.95e-25	102
Msa0381850	AT2G38470.1	49.123	57	28	1	117	173	184	239	1.19e-12	65.5
Msa0381850	AT4G04450.2	43.878	98	52	2	77	173	160	255	1.59e-24	99.0
Msa0381850	AT3G01080.2	53.947	76	35	0	98	173	325	400	3.07e-24	98.6
Msa0381850	AT2G03340.1	51.316	76	37	0	98	173	396	471	4.07e-24	98.2
Msa0381850	AT2G03340.1	39.785	93	55	1	81	173	214	305	3.58e-13	67.0
Msa0381850	AT3G01080.1	53.947	76	35	0	98	173	287	362	4.13e-24	97.8
Msa0381850	AT4G04450.1	43.878	98	52	2	77	173	254	349	5.76e-24	97.8
Msa0381850	AT2G21900.1	48.387	93	40	2	91	175	75	167	8.99e-24	93.2
Msa0381850	AT2G30250.1	52.632	76	36	0	98	173	309	384	1.78e-23	95.9
Msa0381850	AT5G15130.2	46.250	80	42	1	95	173	163	242	3.94e-22	92.8
Msa0381850	AT5G15130.1	46.250	80	42	1	95	173	205	284	4.94e-22	92.4
Msa0381850	AT2G04880.2	55.556	72	32	0	102	173	268	339	8.17e-22	91.7
Msa0381850	AT2G04880.2	32.258	124	74	3	57	173	46	166	4.72e-11	60.8
Msa0381850	AT2G04880.1	55.556	72	32	0	102	173	292	363	9.21e-22	91.7
Msa0381850	AT2G04880.1	32.258	124	74	3	57	173	46	166	4.28e-11	60.8
Msa0381850	AT1G62300.1	49.333	75	37	1	100	173	295	369	2.81e-21	90.5
Msa0381850	AT4G31800.2	43.333	90	50	1	86	174	80	169	4.84e-21	87.0
Msa0381850	AT1G68150.1	50.000	74	36	1	101	173	219	292	8.66e-21	88.2
Msa0381850	AT4G31800.1	43.333	90	50	1	86	174	145	234	1.13e-20	87.0
Msa0381850	AT2G25000.2	50.794	63	30	1	116	177	102	164	1.61e-20	85.1
Msa0381850	AT2G25000.4	50.794	63	30	1	116	177	102	164	1.61e-20	85.1
Msa0381850	AT2G46130.2	47.619	84	40	1	90	173	3	82	1.74e-20	82.0
Msa0381850	AT2G25000.3	50.794	63	30	1	116	177	124	186	3.69e-20	84.7
Msa0381850	AT2G25000.1	50.794	63	30	1	116	177	145	207	4.44e-20	84.7
Msa0381850	AT4G30935.1	47.126	87	41	1	87	173	306	387	5.18e-20	86.7
Msa0381850	AT1G55600.1	44.186	86	47	1	91	175	280	365	1.85e-19	85.1
Msa0381850	AT5G43290.1	54.098	61	28	0	115	175	112	172	4.71e-19	82.0
Msa0381850	AT2G37260.3	42.991	107	59	2	69	173	219	325	5.98e-19	82.8
Msa0381850	AT2G37260.3	46.667	75	35	2	103	173	67	140	3.51e-12	63.9
Msa0381850	AT2G37260.2	42.991	107	59	2	69	173	217	323	6.00e-19	82.8
Msa0381850	AT2G37260.2	46.667	75	35	2	103	173	65	138	3.80e-12	63.9
Msa0381850	AT4G01720.1	45.946	74	39	1	101	173	223	296	7.75e-19	83.2
Msa0381850	AT1G18860.1	44.000	75	41	1	100	173	222	296	7.91e-19	83.2
Msa0381850	AT2G37260.1	56.452	62	27	0	112	173	344	405	1.12e-18	82.8
Msa0381850	AT2G37260.1	46.667	75	35	2	103	173	147	220	4.17e-12	63.9
Msa0381850	AT4G22070.4	44.048	84	46	1	91	173	271	354	1.73e-18	82.4
Msa0381850	AT4G22070.3	44.048	84	46	1	91	173	271	354	1.73e-18	82.4
Msa0381850	AT4G22070.2	44.048	84	46	1	91	173	271	354	1.73e-18	82.4
Msa0381850	AT4G22070.1	44.048	84	46	1	91	173	271	354	1.73e-18	82.4
Msa0381850	AT4G31550.1	46.154	78	38	2	97	173	229	303	1.04e-17	79.3
Msa0381850	AT4G31550.2	46.154	78	38	2	97	173	228	302	1.13e-17	79.0
Msa0381850	AT3G04670.1	44.330	97	52	2	79	173	223	319	1.14e-17	79.3
Msa0381850	AT5G28650.1	44.330	97	52	2	79	173	223	319	1.38e-17	79.0
Msa0381850	AT2G30590.1	42.708	96	53	2	80	173	275	370	1.85e-17	79.0
Msa0381850	AT4G24240.1	50.000	78	35	2	97	173	264	338	2.03e-17	78.6
Msa0381850	AT2G23320.1	33.577	137	70	4	52	173	167	297	2.60e-17	78.2
Msa0381850	AT1G80840.1	42.466	73	39	2	104	173	131	203	5.78e-17	77.0
Msa0381850	AT2G24570.1	41.414	99	55	2	78	173	202	300	1.28e-16	76.3
Msa0381850	AT1G30650.1	37.190	121	68	4	61	173	154	274	9.16e-16	74.3
Msa0381850	AT1G29280.1	52.632	57	26	1	118	173	75	131	4.16e-15	71.2
Msa0381850	AT5G52830.1	57.895	57	23	1	118	173	166	222	5.75e-15	71.6
Msa0381850	AT4G01250.1	39.759	83	47	2	92	173	105	185	1.59e-14	70.1
Msa0381850	AT2G34830.1	38.835	103	55	4	79	173	170	272	1.77e-14	70.9
Msa0381850	AT1G69810.2	37.634	93	56	2	83	173	111	203	1.93e-14	70.1
Msa0381850	AT2G34830.2	38.835	103	55	4	79	173	179	281	2.02e-14	70.5
Msa0381850	AT1G69810.1	37.634	93	56	2	83	173	169	261	2.37e-14	70.1
Msa0381850	AT3G58710.1	49.254	67	33	1	108	173	62	128	2.85e-14	69.3
Msa0381850	AT3G58710.2	49.254	67	33	1	108	173	61	127	3.05e-14	68.9
Msa0381850	AT4G23550.1	47.619	63	32	1	112	173	135	197	8.12e-14	68.2
Msa0381850	AT5G45050.4	46.575	73	32	2	108	173	1026	1098	1.35e-12	65.5
Msa0381850	AT5G45050.1	46.575	73	32	2	108	173	1165	1237	1.39e-12	65.5
Msa0381850	AT5G45050.2	46.575	73	32	2	108	173	1137	1209	1.51e-12	65.5
Msa0381850	AT1G66560.1	49.153	59	27	1	117	172	103	161	4.75e-12	62.8
Msa0381850	AT5G01900.1	33.684	95	60	1	80	171	73	167	5.03e-12	62.8
Msa0381850	AT3G56400.1	31.579	114	58	3	79	172	65	178	1.20e-11	62.0
Msa0381850	AT1G66600.1	50.000	60	27	1	116	172	102	161	1.52e-11	61.2
Msa0381850	AT2G46400.1	37.500	96	55	2	82	172	67	162	2.01e-11	61.6
Msa0381850	AT1G66550.1	34.375	96	59	2	80	172	72	166	8.62e-11	59.3

Find 54 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGAATTAGTAGGTGATTT+TGG	0.165572	3_1:-84200637	Msa0381850:CDS
TCAGGTGAATTTGGTGATAT+TGG	0.252768	3_1:+84200790	None:intergenic
CAAGTCAGAGGTTGAAATTC+TGG	0.266650	3_1:-84200137	Msa0381850:CDS
ACCAACCAAAATCCGATCTT+TGG	0.282960	3_1:+84199649	None:intergenic
TCAATGATTTCTTTCAATAA+TGG	0.299778	3_1:-84200847	Msa0381850:CDS
TATTAGAAGACCCCTCAATT+TGG	0.299929	3_1:+84200602	None:intergenic
TGAAATTTGATGATGATATA+TGG	0.328388	3_1:-84200723	Msa0381850:CDS
AAATCGCTGTCAGGTGAATT+TGG	0.343453	3_1:+84200781	None:intergenic
CTTGTTGAATGTCACGGTTC+AGG	0.355014	3_1:+84200662	None:intergenic
TGTAGATGTTACCTTGGATT+GGG	0.357000	3_1:+84200064	None:intergenic
ATAGGAGGTGTCAGCAATAA+AGG	0.363243	3_1:-84200202	Msa0381850:intron
TAAATAGTGATAACTAGTTT+TGG	0.373552	3_1:+84199758	None:intergenic
TTGTTTACAGGAACTACTAT+AGG	0.382242	3_1:-84199916	Msa0381850:intron
CAGAATTTCAACCTCTGACT+TGG	0.388820	3_1:+84200138	None:intergenic
GTTCTCACTAGACCAAGTTT+TGG	0.390545	3_1:-84199793	Msa0381850:exon
TTTCACCAACCAGTGGCCTT+TGG	0.391392	3_1:-84200761	Msa0381850:CDS
GAGGTTGAAATTCTGGATGA+TGG	0.407475	3_1:-84200130	Msa0381850:CDS
AAATTCTGGATGATGGGTTC+AGG	0.414441	3_1:-84200123	Msa0381850:CDS
CAACAAGCTAATGAATTAGT+AGG	0.439335	3_1:-84200646	Msa0381850:CDS
CATGAGAATTTACCAACTCT+TGG	0.445368	3_1:+84199713	None:intergenic
TAGGTTGTTATTACATAACT+TGG	0.446464	3_1:+84199839	None:intergenic
ATGTAGATGTTACCTTGGAT+TGG	0.454882	3_1:+84200063	None:intergenic
GTCTAGTGAGAACGTAGTTA+AGG	0.476057	3_1:+84199735	None:intergenic
TCCATGAAGATGCCAAAACT+TGG	0.483170	3_1:+84199781	None:intergenic
AATGGCTCAGTATCATCATC+TGG	0.498163	3_1:+84200700	None:intergenic
TGGATGATGGGTTCAGGTGG+AGG	0.514242	3_1:-84200117	Msa0381850:CDS
TACTATAGGTGTTCAGTGGA+TGG	0.515134	3_1:-84199902	Msa0381850:CDS
CATTAGCTTGTTGAATGTCA+CGG	0.515880	3_1:+84200656	None:intergenic
TTAATAATCATCGTCAAAAG+TGG	0.523666	3_1:+84199590	None:intergenic
GGGTTCAGGTGGAGGAAGTA+CGG	0.526912	3_1:-84200109	Msa0381850:CDS
AGGTTGAAATTCTGGATGAT+GGG	0.535485	3_1:-84200129	Msa0381850:CDS
AGGAAGTGGAAGCCAAATTG+AGG	0.537025	3_1:-84200614	Msa0381850:CDS
GGAAGTGGAAGCCAAATTGA+GGG	0.538634	3_1:-84200613	Msa0381850:CDS
CAGCAATAAAGGTGAGAAGA+AGG	0.542475	3_1:-84200191	Msa0381850:CDS
TGGTTGGTGAAATCGCTGTC+AGG	0.551897	3_1:+84200772	None:intergenic
GAGGAAGTACGGAAAGAAGA+TGG	0.552357	3_1:-84200098	Msa0381850:CDS
TTCTGGATGATGGGTTCAGG+TGG	0.569211	3_1:-84200120	Msa0381850:CDS
AGGACATGTTCAGAAACAAA+TGG	0.569897	3_1:+84200682	None:intergenic
CAGAGAGTTCCAAAGGCCAC+TGG	0.574642	3_1:+84200752	None:intergenic
ATCGTCAAAAGTGGTAAACC+TGG	0.574761	3_1:+84199599	None:intergenic
TGCATTCAAAACCAAGTCAG+AGG	0.595589	3_1:-84200149	Msa0381850:CDS
TGTTAATAATATGTAGAACC+AGG	0.596402	3_1:-84199617	Msa0381850:three_prime_UTR
AAGTACTCAGAGAGTTCCAA+AGG	0.612038	3_1:+84200745	None:intergenic
AAAGAGAGTTGAGAGAGATG+TGG	0.612213	3_1:-84199867	Msa0381850:CDS
CAACATGTAATAAACACAAG+TGG	0.614021	3_1:+84199529	None:intergenic
ATGAGTATGTGTGCCTTCGT+AGG	0.625921	3_1:+84199820	None:intergenic
GTAGATGTTACCTTGGATTG+GGG	0.634410	3_1:+84200065	None:intergenic
GAACTACTATAGGTGTTCAG+TGG	0.652914	3_1:-84199906	Msa0381850:CDS
GAGTTCCAAAGGCCACTGGT+TGG	0.656594	3_1:+84200756	None:intergenic
TATGTAATAACAACCTACGA+AGG	0.679326	3_1:-84199833	Msa0381850:CDS
GTTCTCACTAGACCAAGAGT+TGG	0.680967	3_1:-84199725	Msa0381850:three_prime_UTR
TTGAAAGAAATCATTGAACG+TGG	0.691114	3_1:+84200853	None:intergenic
GAAGTGGAAGCCAAATTGAG+GGG	0.700715	3_1:-84200612	Msa0381850:CDS
ACAGCGATTTCACCAACCAG+TGG	0.708904	3_1:-84200768	Msa0381850:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATATAATATATAAGAGA+TGG	+	chr3_1:84200400-84200419	None:intergenic	10.0%
!!	AATATATAATATATAAGAGA+TGG	+	chr3_1:84200400-84200419	None:intergenic	10.0%
!!	AGAAAGAAATTAAATTTATG+AGG	+	chr3_1:84200071-84200090	None:intergenic	15.0%
!!	AGAAAGAAATTAAATTTATG+AGG	+	chr3_1:84200071-84200090	None:intergenic	15.0%
!!	TCAATGATTTCTTTCAATAA+TGG	-	chr3_1:84199513-84199532	Msa0381850:three_prime_UTR	20.0%
!!!	TGTCATAATTTTTTTGCTAT+TGG	+	chr3_1:84199541-84199560	None:intergenic	20.0%
!!!	TGAAATTTGATGATGATATA+TGG	-	chr3_1:84199637-84199656	Msa0381850:three_prime_UTR	20.0%
!!!	TACAATTTAATTTAGGAACT+TGG	+	chr3_1:84199789-84199808	None:intergenic	20.0%
!!	AAATTAATTCATATACACGT+CGG	-	chr3_1:84199813-84199832	Msa0381850:CDS	20.0%
!!!	CATAGAAGATATTTTTTTGA+AGG	+	chr3_1:84200117-84200136	None:intergenic	20.0%
!!	AAAAATATCTTCTATGTCAT+TGG	-	chr3_1:84200121-84200140	Msa0381850:CDS	20.0%
!!!	TAAATAGTGATAACTAGTTT+TGG	+	chr3_1:84200605-84200624	None:intergenic	20.0%
!!	TCAATGATTTCTTTCAATAA+TGG	-	chr3_1:84199513-84199532	Msa0381850:three_prime_UTR	20.0%
!!!	TGTCATAATTTTTTTGCTAT+TGG	+	chr3_1:84199541-84199560	None:intergenic	20.0%
!!!	TGAAATTTGATGATGATATA+TGG	-	chr3_1:84199637-84199656	Msa0381850:three_prime_UTR	20.0%
!!!	TACAATTTAATTTAGGAACT+TGG	+	chr3_1:84199789-84199808	None:intergenic	20.0%
!!	AAATTAATTCATATACACGT+CGG	-	chr3_1:84199813-84199832	Msa0381850:CDS	20.0%
!!!	CATAGAAGATATTTTTTTGA+AGG	+	chr3_1:84200117-84200136	None:intergenic	20.0%
!!	AAAAATATCTTCTATGTCAT+TGG	-	chr3_1:84200121-84200140	Msa0381850:CDS	20.0%
!!!	TAAATAGTGATAACTAGTTT+TGG	+	chr3_1:84200605-84200624	None:intergenic	20.0%
!!	AATGAATTAGTAGGTGATTT+TGG	-	chr3_1:84199723-84199742	Msa0381850:three_prime_UTR	25.0%
!!	TGACAAGGTAAAACTTTTTA+TGG	-	chr3_1:84199930-84199949	Msa0381850:intron	25.0%
!!	GACAAGGTAAAACTTTTTAT+GGG	-	chr3_1:84199931-84199950	Msa0381850:intron	25.0%
!!	ACAAGGTAAAACTTTTTATG+GGG	-	chr3_1:84199932-84199951	Msa0381850:intron	25.0%
!!!	TTGGTTTGTGTCATATTTAT+AGG	-	chr3_1:84200140-84200159	Msa0381850:CDS	25.0%
!!	GAATTTCCAAATTTGTTTAC+AGG	-	chr3_1:84200432-84200451	Msa0381850:intron	25.0%
!!	TAGGTTGTTATTACATAACT+TGG	+	chr3_1:84200524-84200543	None:intergenic	25.0%
!!	CTTTTTGTAGAAACAAGAAA+CGG	+	chr3_1:84200686-84200705	None:intergenic	25.0%
!	CAAAAAGAAAAACCAAAGAT+CGG	-	chr3_1:84200699-84200718	Msa0381850:CDS	25.0%
!	TGTTAATAATATGTAGAACC+AGG	-	chr3_1:84200743-84200762	Msa0381850:CDS	25.0%
!	TTAATAATCATCGTCAAAAG+TGG	+	chr3_1:84200773-84200792	None:intergenic	25.0%
!!	CTTTTGACGATGATTATTAA+AGG	-	chr3_1:84200773-84200792	Msa0381850:CDS	25.0%
!!!	ACCACTTGTGTTTTTTTTTT+AGG	-	chr3_1:84200803-84200822	Msa0381850:CDS	25.0%
!	TCCTAAAAAAAAAACACAAG+TGG	+	chr3_1:84200807-84200826	None:intergenic	25.0%
!!	AATGAATTAGTAGGTGATTT+TGG	-	chr3_1:84199723-84199742	Msa0381850:three_prime_UTR	25.0%
!!	TGACAAGGTAAAACTTTTTA+TGG	-	chr3_1:84199930-84199949	Msa0381850:intron	25.0%
!!	GACAAGGTAAAACTTTTTAT+GGG	-	chr3_1:84199931-84199950	Msa0381850:intron	25.0%
!!	ACAAGGTAAAACTTTTTATG+GGG	-	chr3_1:84199932-84199951	Msa0381850:intron	25.0%
!!!	TTGGTTTGTGTCATATTTAT+AGG	-	chr3_1:84200140-84200159	Msa0381850:CDS	25.0%
!!	GAATTTCCAAATTTGTTTAC+AGG	-	chr3_1:84200432-84200451	Msa0381850:intron	25.0%
!!	TAGGTTGTTATTACATAACT+TGG	+	chr3_1:84200524-84200543	None:intergenic	25.0%
!!	CTTTTTGTAGAAACAAGAAA+CGG	+	chr3_1:84200686-84200705	None:intergenic	25.0%
!	CAAAAAGAAAAACCAAAGAT+CGG	-	chr3_1:84200699-84200718	Msa0381850:CDS	25.0%
!	TGTTAATAATATGTAGAACC+AGG	-	chr3_1:84200743-84200762	Msa0381850:CDS	25.0%
!	TTAATAATCATCGTCAAAAG+TGG	+	chr3_1:84200773-84200792	None:intergenic	25.0%
!!	CTTTTGACGATGATTATTAA+AGG	-	chr3_1:84200773-84200792	Msa0381850:CDS	25.0%
!!!	ACCACTTGTGTTTTTTTTTT+AGG	-	chr3_1:84200803-84200822	Msa0381850:CDS	25.0%
!	TCCTAAAAAAAAAACACAAG+TGG	+	chr3_1:84200807-84200826	None:intergenic	25.0%
	TTGAAAGAAATCATTGAACG+TGG	+	chr3_1:84199510-84199529	None:intergenic	30.0%
	CAACAAGCTAATGAATTAGT+AGG	-	chr3_1:84199714-84199733	Msa0381850:three_prime_UTR	30.0%
!!	ACACATATGATTTGTTGACA+AGG	-	chr3_1:84199915-84199934	Msa0381850:intron	30.0%
	ACTGAGTTGCTTATAAAAAG+TGG	+	chr3_1:84200010-84200029	None:intergenic	30.0%
!	ACTTTTTATAAGCAACTCAG+TGG	-	chr3_1:84200009-84200028	Msa0381850:intron	30.0%
	GTTTGTGTCATATTTATAGG+AGG	-	chr3_1:84200143-84200162	Msa0381850:CDS	30.0%
	TTCATATGTAGATGTTACCT+TGG	+	chr3_1:84200305-84200324	None:intergenic	30.0%
	GTAGTTCCTGTAAACAAATT+TGG	+	chr3_1:84200441-84200460	None:intergenic	30.0%
	TTGTTTACAGGAACTACTAT+AGG	-	chr3_1:84200444-84200463	Msa0381850:intron	30.0%
	TATGTAATAACAACCTACGA+AGG	-	chr3_1:84200527-84200546	Msa0381850:intron	30.0%
!	AAAAACCAAAGATCGGATTT+TGG	-	chr3_1:84200706-84200725	Msa0381850:CDS	30.0%
	CAACATGTAATAAACACAAG+TGG	+	chr3_1:84200834-84200853	None:intergenic	30.0%
	TTGAAAGAAATCATTGAACG+TGG	+	chr3_1:84199510-84199529	None:intergenic	30.0%
	CAACAAGCTAATGAATTAGT+AGG	-	chr3_1:84199714-84199733	Msa0381850:three_prime_UTR	30.0%
!!	ACACATATGATTTGTTGACA+AGG	-	chr3_1:84199915-84199934	Msa0381850:intron	30.0%
	ACTGAGTTGCTTATAAAAAG+TGG	+	chr3_1:84200010-84200029	None:intergenic	30.0%
!	ACTTTTTATAAGCAACTCAG+TGG	-	chr3_1:84200009-84200028	Msa0381850:intron	30.0%
	GTTTGTGTCATATTTATAGG+AGG	-	chr3_1:84200143-84200162	Msa0381850:CDS	30.0%
	TTCATATGTAGATGTTACCT+TGG	+	chr3_1:84200305-84200324	None:intergenic	30.0%
	GTAGTTCCTGTAAACAAATT+TGG	+	chr3_1:84200441-84200460	None:intergenic	30.0%
	TTGTTTACAGGAACTACTAT+AGG	-	chr3_1:84200444-84200463	Msa0381850:intron	30.0%
	TATGTAATAACAACCTACGA+AGG	-	chr3_1:84200527-84200546	Msa0381850:intron	30.0%
!	AAAAACCAAAGATCGGATTT+TGG	-	chr3_1:84200706-84200725	Msa0381850:CDS	30.0%
	CAACATGTAATAAACACAAG+TGG	+	chr3_1:84200834-84200853	None:intergenic	30.0%
!	TCAGGTGAATTTGGTGATAT+TGG	+	chr3_1:84199573-84199592	None:intergenic	35.0%
	AGGACATGTTCAGAAACAAA+TGG	+	chr3_1:84199681-84199700	None:intergenic	35.0%
!!	CATTAGCTTGTTGAATGTCA+CGG	+	chr3_1:84199707-84199726	None:intergenic	35.0%
!	GAATTAGTAGGTGATTTTGG+AGG	-	chr3_1:84199726-84199745	Msa0381850:three_prime_UTR	35.0%
	TATTAGAAGACCCCTCAATT+TGG	+	chr3_1:84199761-84199780	None:intergenic	35.0%
	AGGTTGAAATTCTGGATGAT+GGG	-	chr3_1:84200231-84200250	Msa0381850:intron	35.0%
	TGTAGATGTTACCTTGGATT+GGG	+	chr3_1:84200299-84200318	None:intergenic	35.0%
	ATGTAGATGTTACCTTGGAT+TGG	+	chr3_1:84200300-84200319	None:intergenic	35.0%
!!	TCTCAACTCTCTTTTTCACT+TGG	+	chr3_1:84200487-84200506	None:intergenic	35.0%
	CATGAGAATTTACCAACTCT+TGG	+	chr3_1:84200650-84200669	None:intergenic	35.0%
!	TCAGGTGAATTTGGTGATAT+TGG	+	chr3_1:84199573-84199592	None:intergenic	35.0%
	AGGACATGTTCAGAAACAAA+TGG	+	chr3_1:84199681-84199700	None:intergenic	35.0%
!!	CATTAGCTTGTTGAATGTCA+CGG	+	chr3_1:84199707-84199726	None:intergenic	35.0%
!	GAATTAGTAGGTGATTTTGG+AGG	-	chr3_1:84199726-84199745	Msa0381850:three_prime_UTR	35.0%
	TATTAGAAGACCCCTCAATT+TGG	+	chr3_1:84199761-84199780	None:intergenic	35.0%
	AGGTTGAAATTCTGGATGAT+GGG	-	chr3_1:84200231-84200250	Msa0381850:intron	35.0%
	TGTAGATGTTACCTTGGATT+GGG	+	chr3_1:84200299-84200318	None:intergenic	35.0%
	ATGTAGATGTTACCTTGGAT+TGG	+	chr3_1:84200300-84200319	None:intergenic	35.0%
!!	TCTCAACTCTCTTTTTCACT+TGG	+	chr3_1:84200487-84200506	None:intergenic	35.0%
	CATGAGAATTTACCAACTCT+TGG	+	chr3_1:84200650-84200669	None:intergenic	35.0%
	AAATCGCTGTCAGGTGAATT+TGG	+	chr3_1:84199582-84199601	None:intergenic	40.0%
	AAGTACTCAGAGAGTTCCAA+AGG	+	chr3_1:84199618-84199637	None:intergenic	40.0%
	AATGGCTCAGTATCATCATC+TGG	+	chr3_1:84199663-84199682	None:intergenic	40.0%
!!	ATAGGAGGTGTCAGCAATAA+AGG	-	chr3_1:84200158-84200177	Msa0381850:CDS	40.0%
	CAGCAATAAAGGTGAGAAGA+AGG	-	chr3_1:84200169-84200188	Msa0381850:CDS	40.0%
	TGCATTCAAAACCAAGTCAG+AGG	-	chr3_1:84200211-84200230	Msa0381850:intron	40.0%
	CAGAATTTCAACCTCTGACT+TGG	+	chr3_1:84200225-84200244	None:intergenic	40.0%
	CAAGTCAGAGGTTGAAATTC+TGG	-	chr3_1:84200223-84200242	Msa0381850:intron	40.0%
	GAGGTTGAAATTCTGGATGA+TGG	-	chr3_1:84200230-84200249	Msa0381850:intron	40.0%
!!	AAATTCTGGATGATGGGTTC+AGG	-	chr3_1:84200237-84200256	Msa0381850:intron	40.0%
	GTAGATGTTACCTTGGATTG+GGG	+	chr3_1:84200298-84200317	None:intergenic	40.0%
	GAACTACTATAGGTGTTCAG+TGG	-	chr3_1:84200454-84200473	Msa0381850:intron	40.0%
	TACTATAGGTGTTCAGTGGA+TGG	-	chr3_1:84200458-84200477	Msa0381850:intron	40.0%
	AAAGAGAGTTGAGAGAGATG+TGG	-	chr3_1:84200493-84200512	Msa0381850:intron	40.0%
!	GTTCTCACTAGACCAAGTTT+TGG	-	chr3_1:84200567-84200586	Msa0381850:intron	40.0%
!!	ACCAAGTTTTGGCATCTTCA+TGG	-	chr3_1:84200578-84200597	Msa0381850:intron	40.0%
	TCCATGAAGATGCCAAAACT+TGG	+	chr3_1:84200582-84200601	None:intergenic	40.0%
	GTCTAGTGAGAACGTAGTTA+AGG	+	chr3_1:84200628-84200647	None:intergenic	40.0%
!!	ACCAAAGATCGGATTTTGGT+TGG	-	chr3_1:84200710-84200729	Msa0381850:CDS	40.0%
	ACCAACCAAAATCCGATCTT+TGG	+	chr3_1:84200714-84200733	None:intergenic	40.0%
	ATCGTCAAAAGTGGTAAACC+TGG	+	chr3_1:84200764-84200783	None:intergenic	40.0%
	AAATCGCTGTCAGGTGAATT+TGG	+	chr3_1:84199582-84199601	None:intergenic	40.0%
	AAGTACTCAGAGAGTTCCAA+AGG	+	chr3_1:84199618-84199637	None:intergenic	40.0%
	AATGGCTCAGTATCATCATC+TGG	+	chr3_1:84199663-84199682	None:intergenic	40.0%
!!	ATAGGAGGTGTCAGCAATAA+AGG	-	chr3_1:84200158-84200177	Msa0381850:CDS	40.0%
	CAGCAATAAAGGTGAGAAGA+AGG	-	chr3_1:84200169-84200188	Msa0381850:CDS	40.0%
	TGCATTCAAAACCAAGTCAG+AGG	-	chr3_1:84200211-84200230	Msa0381850:intron	40.0%
	CAGAATTTCAACCTCTGACT+TGG	+	chr3_1:84200225-84200244	None:intergenic	40.0%
	CAAGTCAGAGGTTGAAATTC+TGG	-	chr3_1:84200223-84200242	Msa0381850:intron	40.0%
	GAGGTTGAAATTCTGGATGA+TGG	-	chr3_1:84200230-84200249	Msa0381850:intron	40.0%
!!	AAATTCTGGATGATGGGTTC+AGG	-	chr3_1:84200237-84200256	Msa0381850:intron	40.0%
	GTAGATGTTACCTTGGATTG+GGG	+	chr3_1:84200298-84200317	None:intergenic	40.0%
	GAACTACTATAGGTGTTCAG+TGG	-	chr3_1:84200454-84200473	Msa0381850:intron	40.0%
	TACTATAGGTGTTCAGTGGA+TGG	-	chr3_1:84200458-84200477	Msa0381850:intron	40.0%
	AAAGAGAGTTGAGAGAGATG+TGG	-	chr3_1:84200493-84200512	Msa0381850:intron	40.0%
!	GTTCTCACTAGACCAAGTTT+TGG	-	chr3_1:84200567-84200586	Msa0381850:intron	40.0%
!!	ACCAAGTTTTGGCATCTTCA+TGG	-	chr3_1:84200578-84200597	Msa0381850:intron	40.0%
	TCCATGAAGATGCCAAAACT+TGG	+	chr3_1:84200582-84200601	None:intergenic	40.0%
	GTCTAGTGAGAACGTAGTTA+AGG	+	chr3_1:84200628-84200647	None:intergenic	40.0%
!!	ACCAAAGATCGGATTTTGGT+TGG	-	chr3_1:84200710-84200729	Msa0381850:CDS	40.0%
	ACCAACCAAAATCCGATCTT+TGG	+	chr3_1:84200714-84200733	None:intergenic	40.0%
	ATCGTCAAAAGTGGTAAACC+TGG	+	chr3_1:84200764-84200783	None:intergenic	40.0%
	CTTGTTGAATGTCACGGTTC+AGG	+	chr3_1:84199701-84199720	None:intergenic	45.0%
!!	GTAGGTGATTTTGGAGGAAG+TGG	-	chr3_1:84199732-84199751	Msa0381850:three_prime_UTR	45.0%
	AGGAAGTGGAAGCCAAATTG+AGG	-	chr3_1:84199746-84199765	Msa0381850:three_prime_UTR	45.0%
	GGAAGTGGAAGCCAAATTGA+GGG	-	chr3_1:84199747-84199766	Msa0381850:three_prime_UTR	45.0%
	GAAGTGGAAGCCAAATTGAG+GGG	-	chr3_1:84199748-84199767	Msa0381850:three_prime_UTR	45.0%
!	GAGGAAGTACGGAAAGAAGA+TGG	-	chr3_1:84200262-84200281	Msa0381850:intron	45.0%
	TGAAAAACAGCCCCAATCCA+AGG	-	chr3_1:84200285-84200304	Msa0381850:intron	45.0%
	ATGAGTATGTGTGCCTTCGT+AGG	+	chr3_1:84200543-84200562	None:intergenic	45.0%
	GTTCTCACTAGACCAAGAGT+TGG	-	chr3_1:84200635-84200654	Msa0381850:CDS	45.0%
	CTTGTTGAATGTCACGGTTC+AGG	+	chr3_1:84199701-84199720	None:intergenic	45.0%
!!	GTAGGTGATTTTGGAGGAAG+TGG	-	chr3_1:84199732-84199751	Msa0381850:three_prime_UTR	45.0%
	AGGAAGTGGAAGCCAAATTG+AGG	-	chr3_1:84199746-84199765	Msa0381850:three_prime_UTR	45.0%
	GGAAGTGGAAGCCAAATTGA+GGG	-	chr3_1:84199747-84199766	Msa0381850:three_prime_UTR	45.0%
	GAAGTGGAAGCCAAATTGAG+GGG	-	chr3_1:84199748-84199767	Msa0381850:three_prime_UTR	45.0%
!	GAGGAAGTACGGAAAGAAGA+TGG	-	chr3_1:84200262-84200281	Msa0381850:intron	45.0%
	TGAAAAACAGCCCCAATCCA+AGG	-	chr3_1:84200285-84200304	Msa0381850:intron	45.0%
	ATGAGTATGTGTGCCTTCGT+AGG	+	chr3_1:84200543-84200562	None:intergenic	45.0%
	GTTCTCACTAGACCAAGAGT+TGG	-	chr3_1:84200635-84200654	Msa0381850:CDS	45.0%
!!!	TTTAAAATACAATTTAATTT+AGG	+	chr3_1:84199796-84199815	None:intergenic	5.0%
!!!	TTTAAAATACAATTTAATTT+AGG	+	chr3_1:84199796-84199815	None:intergenic	5.0%
!!	TGGTTGGTGAAATCGCTGTC+AGG	+	chr3_1:84199591-84199610	None:intergenic	50.0%
	ACAGCGATTTCACCAACCAG+TGG	-	chr3_1:84199592-84199611	Msa0381850:three_prime_UTR	50.0%
	TTTCACCAACCAGTGGCCTT+TGG	-	chr3_1:84199599-84199618	Msa0381850:three_prime_UTR	50.0%
!!	TTCTGGATGATGGGTTCAGG+TGG	-	chr3_1:84200240-84200259	Msa0381850:intron	50.0%
!!	TGGTTGGTGAAATCGCTGTC+AGG	+	chr3_1:84199591-84199610	None:intergenic	50.0%
	ACAGCGATTTCACCAACCAG+TGG	-	chr3_1:84199592-84199611	Msa0381850:three_prime_UTR	50.0%
	TTTCACCAACCAGTGGCCTT+TGG	-	chr3_1:84199599-84199618	Msa0381850:three_prime_UTR	50.0%
!!	TTCTGGATGATGGGTTCAGG+TGG	-	chr3_1:84200240-84200259	Msa0381850:intron	50.0%
	GAGTTCCAAAGGCCACTGGT+TGG	+	chr3_1:84199607-84199626	None:intergenic	55.0%
	CAGAGAGTTCCAAAGGCCAC+TGG	+	chr3_1:84199611-84199630	None:intergenic	55.0%
!!	TGGATGATGGGTTCAGGTGG+AGG	-	chr3_1:84200243-84200262	Msa0381850:intron	55.0%
	GGGTTCAGGTGGAGGAAGTA+CGG	-	chr3_1:84200251-84200270	Msa0381850:intron	55.0%
	GAGTTCCAAAGGCCACTGGT+TGG	+	chr3_1:84199607-84199626	None:intergenic	55.0%
	CAGAGAGTTCCAAAGGCCAC+TGG	+	chr3_1:84199611-84199630	None:intergenic	55.0%
!!	TGGATGATGGGTTCAGGTGG+AGG	-	chr3_1:84200243-84200262	Msa0381850:intron	55.0%
	GGGTTCAGGTGGAGGAAGTA+CGG	-	chr3_1:84200251-84200270	Msa0381850:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	84199506	84200876	84199506	ID=Msa0381850;Name=Msa0381850
chr3_1	mRNA	84199506	84200876	84199506	ID=Msa0381850-mRNA-1;Parent=Msa0381850;Name=Msa0381850-mRNA-1;_AED=0.10;_eAED=0.10;_QI=10\|1\|1\|1\|1\|1\|3\|299\|177
chr3_1	exon	84199506	84199928	84199506	ID=Msa0381850-mRNA-1:exon:21868;Parent=Msa0381850-mRNA-1
chr3_1	exon	84200076	84200220	84200076	ID=Msa0381850-mRNA-1:exon:21867;Parent=Msa0381850-mRNA-1
chr3_1	exon	84200602	84200876	84200602	ID=Msa0381850-mRNA-1:exon:21866;Parent=Msa0381850-mRNA-1
chr3_1	five_prime_UTR	84200867	84200876	84200867	ID=Msa0381850-mRNA-1:five_prime_utr;Parent=Msa0381850-mRNA-1
chr3_1	CDS	84200602	84200866	84200602	ID=Msa0381850-mRNA-1:cds;Parent=Msa0381850-mRNA-1
chr3_1	CDS	84200076	84200220	84200076	ID=Msa0381850-mRNA-1:cds;Parent=Msa0381850-mRNA-1
chr3_1	CDS	84199805	84199928	84199805	ID=Msa0381850-mRNA-1:cds;Parent=Msa0381850-mRNA-1
chr3_1	three_prime_UTR	84199506	84199804	84199506	ID=Msa0381850-mRNA-1:three_prime_utr;Parent=Msa0381850-mRNA-1

Gene Sequence

>Msa0381850

ATGATTTCTTTCAATAATGGTACCAATAGCAAAAAAATTATGACAGATAAAAATCCAATATCACCAAATTCACCTGACAGCGATTTCACCAACCAGTGGCCTTTGGAACTCTCTGAGTACTTGAAATTTGATGATGATATATGGCCAGATGATGATACTGAGCCATTTGTTTCTGAACATGTCCTGAACCGTGACATTCAACAAGCTAATGAATTAGTAGGTGATTTTGGAGGAAGTGGAAGCCAAATTGAGGGGTCTTCTAATAGAGGTGTCAGCAATAAAGGTGAGAAGAAGGAAATTAGAGATCATAAAGTTGCATTCAAAACCAAGTCAGAGGTTGAAATTCTGGATGATGGGTTCAGGTGGAGGAAGTACGGAAAGAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGTTCAGTGGATGGATGCCAAGTGAAAAAGAGAGTTGAGAGAGATGTGGATGATCCAAGTTATGTAATAACAACCTACGAAGGCACACATACTCATCTAAGTTCTCACTAG

Protein sequence

>Msa0381850

MISFNNGTNSKKIMTDKNPISPNSPDSDFTNQWPLELSEYLKFDDDIWPDDDTEPFVSEHVLNRDIQQANELVGDFGGSGSQIEGSSNRGVSNKGEKKEIRDHKVAFKTKSEVEILDDGFRWRKYGKKMVKNSPNPRNYYRCSVDGCQVKKRVERDVDDPSYVITTYEGTHTHLSSH*