Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586380 | XP_013454577.1 | 93.934 | 577 | 8 | 1 | 1 | 550 | 1 | 577 | 0.0 | 1107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586380 | sp|Q9C512|MNS1_ARATH | 74.819 | 552 | 100 | 6 | 1 | 524 | 1 | 541 | 0.0 | 814 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586380 | A0A072UHK5 | 93.934 | 577 | 8 | 1 | 1 | 550 | 1 | 577 | 0.0 | 1107 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0381850 | Msa0586380 | 0.800478 | 1.414151e-48 | -8.615850e-47 |
| Msa0586380 | Msa0672570 | 0.806477 | 8.071004e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586380 | MtrunA17_Chr4g0002301 | 93.934 | 577 | 8 | 1 | 1 | 550 | 1 | 577 | 0.0 | 1107 |
| Msa0586380 | MtrunA17_Chr0c31g0494131 | 70.814 | 442 | 102 | 1 | 134 | 548 | 5 | 446 | 0.0 | 634 |
| Msa0586380 | MtrunA17_Chr4g0071731 | 64.037 | 431 | 146 | 2 | 1 | 424 | 1 | 429 | 0.0 | 561 |
| Msa0586380 | MtrunA17_Chr2g0286021 | 38.996 | 518 | 227 | 17 | 87 | 519 | 114 | 627 | 1.76e-96 | 306 |
| Msa0586380 | MtrunA17_Chr4g0071721 | 63.253 | 166 | 31 | 1 | 413 | 548 | 33 | 198 | 4.56e-63 | 205 |
| Msa0586380 | MtrunA17_Chr1g0187981 | 31.403 | 449 | 255 | 10 | 107 | 517 | 46 | 479 | 3.72e-55 | 196 |
| Msa0586380 | MtrunA17_Chr4g0059431 | 30.490 | 469 | 256 | 11 | 110 | 521 | 39 | 494 | 1.22e-48 | 177 |
| Msa0586380 | MtrunA17_Chr0c31g0494141 | 45.390 | 141 | 68 | 2 | 1 | 134 | 1 | 139 | 1.02e-31 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586380 | AT1G51590.1 | 74.819 | 552 | 100 | 6 | 1 | 524 | 1 | 541 | 0.0 | 814 |
| Msa0586380 | AT3G21160.1 | 71.330 | 579 | 124 | 6 | 1 | 548 | 1 | 568 | 0.0 | 808 |
| Msa0586380 | AT1G51590.2 | 80.320 | 437 | 58 | 2 | 116 | 524 | 1 | 437 | 0.0 | 723 |
| Msa0586380 | AT3G21160.2 | 73.012 | 415 | 101 | 3 | 1 | 414 | 1 | 405 | 0.0 | 601 |
| Msa0586380 | AT1G30000.1 | 39.341 | 516 | 226 | 15 | 88 | 519 | 108 | 620 | 6.32e-99 | 313 |
| Msa0586380 | AT1G30000.2 | 39.147 | 516 | 227 | 16 | 88 | 519 | 128 | 640 | 2.28e-94 | 301 |
| Msa0586380 | AT5G43710.2 | 31.403 | 449 | 258 | 8 | 107 | 519 | 39 | 473 | 2.04e-55 | 196 |
| Msa0586380 | AT5G43710.3 | 30.905 | 453 | 255 | 8 | 107 | 519 | 39 | 473 | 2.05e-55 | 196 |
| Msa0586380 | AT5G43710.1 | 30.702 | 456 | 258 | 8 | 107 | 522 | 39 | 476 | 4.51e-55 | 196 |
| Msa0586380 | AT1G27520.1 | 31.209 | 455 | 263 | 8 | 107 | 521 | 36 | 480 | 3.85e-53 | 190 |
Find 159 sgRNAs with CRISPR-Local
Find 453 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTTCCCTTGTCTTTA+AGG | -0.031519 | 4_2:+7478828 | Msa0586380:five_prime_UTR |
| TAAAATTTGTTGAATATTCT+TGG | 0.162503 | 4_2:+7478535 | Msa0586380:five_prime_UTR |
| TATGAAATGCACTCAAAATT+TGG | 0.175445 | 4_2:-7485500 | None:intergenic |
| AATAACTGACTTGCAAAATT+TGG | 0.179095 | 4_2:+7480221 | Msa0586380:CDS |
| TTTGGAATTATGACTAAAAT+AGG | 0.185525 | 4_2:+7485447 | Msa0586380:intron |
| TCTTGATACACTATACATTA+TGG | 0.190941 | 4_2:+7481056 | Msa0586380:CDS |
| CTTAGCACATACGATCTTTC+AGG | 0.196952 | 4_2:+7481751 | Msa0586380:CDS |
| TGCTCCAGGGATGCTTGCTT+TGG | 0.216455 | 4_2:+7483659 | Msa0586380:CDS |
| ATGAATACTTGCTTAAAGTT+TGG | 0.236436 | 4_2:+7483123 | Msa0586380:CDS |
| TCCTTTCTGCCACCTATTCT+AGG | 0.259317 | 4_2:-7485153 | None:intergenic |
| ACGAGGAATTTGTTCCATTA+TGG | 0.262527 | 4_2:+7485253 | Msa0586380:three_prime_UTR |
| AAAACCTTCCGCTGATACTT+TGG | 0.270152 | 4_2:-7482728 | None:intergenic |
| AATTTCGAAGCCACTCCTTT+TGG | 0.273129 | 4_2:+7478682 | Msa0586380:five_prime_UTR |
| TTTCAAGGGTGAGAGTATTT+TGG | 0.274453 | 4_2:+7482649 | Msa0586380:intron |
| GACAAGTTGATTATGTTATA+AGG | 0.292975 | 4_2:-7481850 | None:intergenic |
| AATTCCTCGTCTTTGAATCT+TGG | 0.293136 | 4_2:-7485240 | None:intergenic |
| CTCCAGCTGTAAAACTTTAT+AGG | 0.296089 | 4_2:+7483162 | Msa0586380:CDS |
| TCCCTTCAAGTCAAGCTTCC+TGG | 0.299552 | 4_2:-7480638 | None:intergenic |
| GCTTTGGGATCATCTGGTTA+TGG | 0.305745 | 4_2:+7483675 | Msa0586380:CDS |
| CCCTTGTCTTTAAGGTTGTT+TGG | 0.307762 | 4_2:+7478836 | Msa0586380:five_prime_UTR |
| TGAATACTTGCTTAAAGTTT+GGG | 0.318324 | 4_2:+7483124 | Msa0586380:CDS |
| GTCAATAGCTTTGGAGGTCT+TGG | 0.324765 | 4_2:+7481015 | Msa0586380:CDS |
| TTCTCATTTGAGTTCTTAAC+AGG | 0.325798 | 4_2:-7485117 | None:intergenic |
| CTTATAGTATCTGTATTCTA+TGG | 0.326061 | 4_2:-7485561 | None:intergenic |
| TGAGTAGTAGTAGCAGTAAA+TGG | 0.341072 | 4_2:+7478944 | Msa0586380:CDS |
| GCTCCAGGGATGCTTGCTTT+GGG | 0.341072 | 4_2:+7483660 | Msa0586380:CDS |
| CTTGATACACTATACATTAT+GGG | 0.345860 | 4_2:+7481057 | Msa0586380:CDS |
| ATCTTGGTATGTCTTGTTGC+CGG | 0.354146 | 4_2:-7484641 | None:intergenic |
| TTGGGAAGCAATTGTGAAAC+AGG | 0.354810 | 4_2:+7485303 | Msa0586380:three_prime_UTR |
| TTGAATACCCATTCATCTAA+TGG | 0.357605 | 4_2:-7485048 | None:intergenic |
| ATGCTTGCTTTGGGATCATC+TGG | 0.372484 | 4_2:+7483669 | Msa0586380:CDS |
| CGCATAGAGTCGGGCTATGT+TGG | 0.374873 | 4_2:+7484703 | Msa0586380:CDS |
| CGAATTTGTTTGTCTGATGA+AGG | 0.380422 | 4_2:-7478775 | None:intergenic |
| TTCCCTTCTCTGGATATCAA+TGG | 0.381049 | 4_2:-7480698 | None:intergenic |
| CGGTCATTCCATTAGATGAA+TGG | 0.381669 | 4_2:+7485040 | Msa0586380:CDS |
| TATGGAATGCGCAGATATAT+AGG | 0.384369 | 4_2:-7485543 | None:intergenic |
| TCCCTTCTCTGGATATCAAT+GGG | 0.384629 | 4_2:-7480697 | None:intergenic |
| AAACCTTCCGCTGATACTTT+GGG | 0.389277 | 4_2:-7482727 | None:intergenic |
| CATTTGGCGCCATGGGTGAT+AGG | 0.398474 | 4_2:+7482951 | Msa0586380:CDS |
| AGATGTCAGAATTCCTTCAT+TGG | 0.401087 | 4_2:+7485284 | Msa0586380:three_prime_UTR |
| TCCTATCACATTTGGCGCCA+TGG | 0.401558 | 4_2:+7482943 | Msa0586380:CDS |
| CTTCAAATGATGAGTAATAT+AGG | 0.402362 | 4_2:+7485347 | Msa0586380:three_prime_UTR |
| GTAATATAGGAAATAGAAAT+AGG | 0.404305 | 4_2:+7485360 | Msa0586380:three_prime_UTR |
| ACATCTTACAAGCTCCATAA+TGG | 0.405543 | 4_2:-7485267 | None:intergenic |
| ATAGGAAGTAATCCATCATC+AGG | 0.411882 | 4_2:-7482884 | None:intergenic |
| TGCCAGGAAGCTTGACTTGA+AGG | 0.415453 | 4_2:+7480636 | Msa0586380:CDS |
| GCAACAAGACATACCAAGAT+TGG | 0.418963 | 4_2:+7484644 | Msa0586380:CDS |
| CAGCTGGGTCGCAAACTCTC+TGG | 0.420510 | 4_2:+7481536 | Msa0586380:intron |
| AATAAAACATTCCCTGATGA+TGG | 0.424362 | 4_2:+7482872 | Msa0586380:CDS |
| TCACCACAATCCAGAGTAGT+AGG | 0.425238 | 4_2:+7481721 | Msa0586380:intron |
| CCGCTGATACTTTGGGTCTC+CGG | 0.425952 | 4_2:-7482720 | None:intergenic |
| TTGCTTAAAGTTTGGGTACA+AGG | 0.427453 | 4_2:+7483131 | Msa0586380:CDS |
| ACACAGAAGCACACCCTTTG+AGG | 0.428655 | 4_2:+7485070 | Msa0586380:CDS |
| AAAAGTGGTGTCAATAGCTT+TGG | 0.429770 | 4_2:+7481006 | Msa0586380:CDS |
| GATGTCAGAATTCCTTCATT+GGG | 0.432081 | 4_2:+7485285 | Msa0586380:three_prime_UTR |
| CAAGTCCACTAAAGAAGTCT+TGG | 0.432620 | 4_2:+7480669 | Msa0586380:CDS |
| GGCTACTCTCCTATCACATT+TGG | 0.436591 | 4_2:+7482935 | Msa0586380:CDS |
| TCACAATTGCTTCCCAATGA+AGG | 0.437677 | 4_2:-7485297 | None:intergenic |
| ATCATCCAAGACTTCTTTAG+TGG | 0.438383 | 4_2:-7480674 | None:intergenic |
| CGAAGAAGAAGACTTGACTT+TGG | 0.442376 | 4_2:-7478618 | None:intergenic |
| CAACAAGACATACCAAGATT+GGG | 0.450877 | 4_2:+7484645 | Msa0586380:CDS |
| GTTTATGTCACTTGCGGAAG+AGG | 0.455285 | 4_2:+7483716 | Msa0586380:CDS |
| ATATATTCCAACCCCAATCT+TGG | 0.459533 | 4_2:-7484657 | None:intergenic |
| AAAAGCATAGCAAGACGCTT+TGG | 0.461517 | 4_2:-7479000 | None:intergenic |
| AAGAGTGACTCAACTGTCTC+TGG | 0.462962 | 4_2:-7484601 | None:intergenic |
| GGTCATTCCATTAGATGAAT+GGG | 0.464425 | 4_2:+7485041 | Msa0586380:CDS |
| AATCCTCATAGTGGAACAAC+AGG | 0.466061 | 4_2:+7482914 | Msa0586380:CDS |
| GCACACAATCCTGGATGGAC+TGG | 0.466253 | 4_2:+7481883 | Msa0586380:CDS |
| AAGGTCTGTTAAGTTTGATT+CGG | 0.471042 | 4_2:+7483453 | Msa0586380:CDS |
| GATCCCAAAGCAAGCATCCC+TGG | 0.472500 | 4_2:-7483663 | None:intergenic |
| AAGTGCACGGTGGCACTGCC+AGG | 0.472635 | 4_2:+7480620 | Msa0586380:CDS |
| CAAGGACGTGCACACAATCC+TGG | 0.473872 | 4_2:+7481874 | Msa0586380:CDS |
| GGTATGTCTTGTTGCCGGTT+AGG | 0.474868 | 4_2:-7484636 | None:intergenic |
| GGACGCTTCAAGTAATAAGC+TGG | 0.475500 | 4_2:-7478979 | None:intergenic |
| ACTCAACTGTCTCTGGCCTC+AGG | 0.476268 | 4_2:-7484594 | None:intergenic |
| GGCAGAAAGGAAGGTCGGTC+GGG | 0.477322 | 4_2:+7485165 | Msa0586380:CDS |
| GAACTAGCATGCTTTGCTCC+AGG | 0.478064 | 4_2:+7483645 | Msa0586380:CDS |
| TAGCCTGTTGTTCCACTATG+AGG | 0.480434 | 4_2:-7482917 | None:intergenic |
| CCTATCACATTTGGCGCCAT+GGG | 0.481889 | 4_2:+7482944 | Msa0586380:CDS |
| ATCTATATCAATCCTCATAG+TGG | 0.483288 | 4_2:+7482905 | Msa0586380:CDS |
| AGTGGTGTCAATAGCTTTGG+AGG | 0.491088 | 4_2:+7481009 | Msa0586380:CDS |
| ATAAACTTCTGCGAATCATC+AGG | 0.492014 | 4_2:-7483699 | None:intergenic |
| CTATGAGGATTGATATAGAT+AGG | 0.493737 | 4_2:-7482902 | None:intergenic |
| CCCATGGCGCCAAATGTGAT+AGG | 0.494378 | 4_2:-7482944 | None:intergenic |
| AGCAATGAACTCTAGTTGTT+CGG | 0.495505 | 4_2:-7482684 | None:intergenic |
| CACACAATCCTGGATGGACT+GGG | 0.495719 | 4_2:+7481884 | Msa0586380:CDS |
| CAGATAGATTACTGCCTGCA+TGG | 0.503951 | 4_2:+7481809 | Msa0586380:CDS |
| CCTGCATGGAACACACCTAC+AGG | 0.506080 | 4_2:+7481823 | Msa0586380:CDS |
| CCTGTAGGTGTGTTCCATGC+AGG | 0.506768 | 4_2:-7481823 | None:intergenic |
| AAGAACTCTCGCATAGAGTC+GGG | 0.510675 | 4_2:+7484694 | Msa0586380:CDS |
| GTCGGGCTATGTTGGACTAA+AGG | 0.512086 | 4_2:+7484711 | Msa0586380:CDS |
| TCTAATGGAATGACCGAAGA+AGG | 0.512329 | 4_2:-7485033 | None:intergenic |
| TCCTAGAATAGGTGGCAGAA+AGG | 0.513208 | 4_2:+7485152 | Msa0586380:CDS |
| ATCTCTAAAACAGAGATATG+TGG | 0.515657 | 4_2:+7483417 | Msa0586380:intron |
| TCTTTGAATCTTGGTTGAAG+TGG | 0.515985 | 4_2:-7485231 | None:intergenic |
| CTTCTCACATATATAAGTAA+AGG | 0.516300 | 4_2:-7483492 | None:intergenic |
| TGCTTAAAGTTTGGGTACAA+GGG | 0.520166 | 4_2:+7483132 | Msa0586380:CDS |
| TGGCAGAAAGGAAGGTCGGT+CGG | 0.523530 | 4_2:+7485164 | Msa0586380:CDS |
| AAAGATCGTATGTGCTAAGA+AGG | 0.528862 | 4_2:-7481747 | None:intergenic |
| TCTCTAAAACAGAGATATGT+GGG | 0.531080 | 4_2:+7483418 | Msa0586380:intron |
| TTCCTTGTCACAATCCTCAA+AGG | 0.532807 | 4_2:-7485084 | None:intergenic |
| AAGATGCAATGCTTCATGCT+TGG | 0.537436 | 4_2:+7480728 | Msa0586380:CDS |
| ATGCGCAGATATATAGGCCT+CGG | 0.537706 | 4_2:-7485537 | None:intergenic |
| TTCTTATGAGAAATATGCAT+GGG | 0.539737 | 4_2:+7480753 | Msa0586380:CDS |
| TGTAAATTCGAATAATTCGA+AGG | 0.540988 | 4_2:+7478879 | Msa0586380:five_prime_UTR |
| GAATTTGTTTGTCTGATGAA+GGG | 0.542271 | 4_2:-7478774 | None:intergenic |
| AAACTTACCCCAGTCCATCC+AGG | 0.543349 | 4_2:-7481892 | None:intergenic |
| ATTATGACTAAAATAGGTTG+TGG | 0.546171 | 4_2:+7485453 | Msa0586380:intron |
| GACAACGAAGCCAATCCAAA+AGG | 0.546838 | 4_2:-7478697 | None:intergenic |
| TCCTTGTCACAATCCTCAAA+GGG | 0.549191 | 4_2:-7485083 | None:intergenic |
| AACTAGCATGCTTTGCTCCA+GGG | 0.557191 | 4_2:+7483646 | Msa0586380:CDS |
| GCCAGGAAGCTTGACTTGAA+GGG | 0.557872 | 4_2:+7480637 | Msa0586380:CDS |
| CTCACTTCCCAGGTTAACAC+TGG | 0.559131 | 4_2:+7484940 | Msa0586380:intron |
| AACTTTAGTCAGAGAATACC+AGG | 0.562310 | 4_2:+7479065 | Msa0586380:CDS |
| AGAATAGGTGGCAGAAAGGA+AGG | 0.566046 | 4_2:+7485156 | Msa0586380:CDS |
| ACATGAGTGTGGGCACATCA+TGG | 0.566632 | 4_2:+7484566 | Msa0586380:CDS |
| AGACATACCAAGATTGGGGT+TGG | 0.568978 | 4_2:+7484650 | Msa0586380:CDS |
| GAAGAACTCTCGCATAGAGT+CGG | 0.574661 | 4_2:+7484693 | Msa0586380:CDS |
| TGTTGCCGGTTAGGCGCCAA+AGG | 0.581339 | 4_2:-7484627 | None:intergenic |
| AAACAAATTCGTAGATTACA+AGG | 0.583330 | 4_2:+7478787 | Msa0586380:five_prime_UTR |
| ATGTTATAAGGAATTCCTGT+AGG | 0.583861 | 4_2:-7481838 | None:intergenic |
| ATGGGGACAAGATGAACTAC+AGG | 0.593624 | 4_2:+7480771 | Msa0586380:CDS |
| TCCCATTGATATCCAGAGAA+GGG | 0.595354 | 4_2:+7480696 | Msa0586380:CDS |
| CATATATAAGTAAAGGAAGA+CGG | 0.597688 | 4_2:-7483485 | None:intergenic |
| ATTGCTCTATCTCAAAGGAC+CGG | 0.598269 | 4_2:+7482701 | Msa0586380:CDS |
| TCATGGTAGACAAGCATGAA+CGG | 0.602371 | 4_2:-7485196 | None:intergenic |
| AGTTCATTGCTCTATCTCAA+AGG | 0.605447 | 4_2:+7482696 | Msa0586380:CDS |
| ATCTTTGTAAAATGGCGAGA+GGG | 0.606061 | 4_2:+7478911 | Msa0586380:exon |
| GCAGAAGTTTATGTCACTTG+CGG | 0.606147 | 4_2:+7483710 | Msa0586380:CDS |
| AGTGGTTCATCAACTAGTCA+TGG | 0.606457 | 4_2:-7485213 | None:intergenic |
| CAATATCTCTAGCTTTGTCA+AGG | 0.608857 | 4_2:-7481786 | None:intergenic |
| ACTTATATATGTGAGAAGAG+TGG | 0.613725 | 4_2:+7483497 | Msa0586380:CDS |
| GACGTGCACACAATCCTGGA+TGG | 0.614534 | 4_2:+7481878 | Msa0586380:CDS |
| ATCCCATTGATATCCAGAGA+AGG | 0.615122 | 4_2:+7480695 | Msa0586380:CDS |
| ACCAAACAACCTTAAAGACA+AGG | 0.617047 | 4_2:-7478837 | None:intergenic |
| ATGTGGGAGAAATCAATGAA+AGG | 0.620443 | 4_2:+7483434 | Msa0586380:CDS |
| GTTCTTATGAGAAATATGCA+TGG | 0.626930 | 4_2:+7480752 | Msa0586380:CDS |
| ATACATGATTTATGTAACCG+AGG | 0.633864 | 4_2:+7485520 | Msa0586380:three_prime_UTR |
| CGAAGCCAATCCAAAAGGAG+TGG | 0.636885 | 4_2:-7478692 | None:intergenic |
| GATGCAAAGTTTCTTTCTCG+CGG | 0.640322 | 4_2:+7484978 | Msa0586380:CDS |
| ACCCTTTGAGGATTGTGACA+AGG | 0.641871 | 4_2:+7485082 | Msa0586380:CDS |
| TAGGAAGTAATCCATCATCA+GGG | 0.641994 | 4_2:-7482883 | None:intergenic |
| GTGTTAATACCTATCACCCA+TGG | 0.646060 | 4_2:-7482960 | None:intergenic |
| AGACCCAAAGTATCAGCGGA+AGG | 0.647056 | 4_2:+7482724 | Msa0586380:CDS |
| TAGGTGGCAGAAAGGAAGGT+CGG | 0.649075 | 4_2:+7485160 | Msa0586380:CDS |
| AACATAATCAACTTGTCACA+AGG | 0.651783 | 4_2:+7481856 | Msa0586380:CDS |
| AACAAGACATACCAAGATTG+GGG | 0.651954 | 4_2:+7484646 | Msa0586380:CDS |
| CCAAACAACCTTAAAGACAA+GGG | 0.653395 | 4_2:-7478836 | None:intergenic |
| GAAGAGTCAAATAAAGTGCA+CGG | 0.653458 | 4_2:+7480607 | Msa0586380:CDS |
| TATATATGTGAGAAGAGTGG+AGG | 0.655638 | 4_2:+7483500 | Msa0586380:CDS |
| GATCTTTGTAAAATGGCGAG+AGG | 0.659557 | 4_2:+7478910 | Msa0586380:exon |
| CCGGAGACCCAAAGTATCAG+CGG | 0.662311 | 4_2:+7482720 | Msa0586380:CDS |
| GATTGTGACAAGGAACGAAG+CGG | 0.686601 | 4_2:+7485092 | Msa0586380:CDS |
| ACACAATCCTGGATGGACTG+GGG | 0.692267 | 4_2:+7481885 | Msa0586380:CDS |
| CCACAATCCAGAGTAGTAGG+TGG | 0.698751 | 4_2:+7481724 | Msa0586380:intron |
| GCACATCATGGAACATCCTG+AGG | 0.700951 | 4_2:+7484578 | Msa0586380:CDS |
| TCTTATGAGAAATATGCATG+GGG | 0.709749 | 4_2:+7480754 | Msa0586380:CDS |
| TCAACCAAGATTCAAAGACG+AGG | 0.715134 | 4_2:+7485236 | Msa0586380:three_prime_UTR |
| GAGTCAAATAAAGTGCACGG+TGG | 0.808220 | 4_2:+7480610 | Msa0586380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATTATTTATGATTTTTT+TGG | + | chr4_2:7480115-7480134 | Msa0586380:intron | 10.0% |
| !!! | TTTTTATTATTTTTTCTTTG+GGG | + | chr4_2:7480557-7480576 | Msa0586380:intron | 10.0% |
| !!! | GTTTATTATACTTTTTTAAT+TGG | - | chr4_2:7481647-7481666 | None:intergenic | 10.0% |
| !! | GATTTATTAAAAAAATAAAG+TGG | - | chr4_2:7484858-7484877 | None:intergenic | 10.0% |
| !!! | TAAAATTTGTTGAATATTCT+TGG | + | chr4_2:7478535-7478554 | Msa0586380:five_prime_UTR | 15.0% |
| !!! | TGATTTCTAGAATAAAAAAT+TGG | - | chr4_2:7478738-7478757 | None:intergenic | 15.0% |
| !!! | TTTTATAGATCTTTGTAAAA+TGG | + | chr4_2:7478903-7478922 | Msa0586380:exon | 15.0% |
| !!! | ATAACTGTTTTTTTAAATAC+AGG | + | chr4_2:7480173-7480192 | Msa0586380:intron | 15.0% |
| !!! | TTCTTTTCATTGTTAATTAT+TGG | - | chr4_2:7480335-7480354 | None:intergenic | 15.0% |
| !! | AATAATTAACAATGAAAAGA+AGG | + | chr4_2:7480334-7480353 | Msa0586380:intron | 15.0% |
| !!! | TTTTATTATTTTTTCTTTGG+GGG | + | chr4_2:7480558-7480577 | Msa0586380:intron | 15.0% |
| !!! | GTTGTTTCTAATATTATATT+TGG | + | chr4_2:7481208-7481227 | Msa0586380:intron | 15.0% |
| !!! | GTAACTTTTATATATGAATT+AGG | - | chr4_2:7481409-7481428 | None:intergenic | 15.0% |
| !!! | TTATACTTTTTTAATTGGAA+GGG | - | chr4_2:7481642-7481661 | None:intergenic | 15.0% |
| !!! | ATTATACTTTTTTAATTGGA+AGG | - | chr4_2:7481643-7481662 | None:intergenic | 15.0% |
| !!! | TGTTTTTTCTTTTTTTTTGT+TGG | + | chr4_2:7481691-7481710 | Msa0586380:intron | 15.0% |
| !! | ACTAGTATAAAAGTTAAAAT+TGG | - | chr4_2:7482547-7482566 | None:intergenic | 15.0% |
| !!! | TTTAACTTTTATACTAGTTT+TGG | + | chr4_2:7482549-7482568 | Msa0586380:intron | 15.0% |
| !!! | ATATATTCAGTTTTTTTACA+GGG | + | chr4_2:7482764-7482783 | Msa0586380:intron | 15.0% |
| !!! | TTTTAGAGATTAAAAAGAAA+TGG | - | chr4_2:7483407-7483426 | None:intergenic | 15.0% |
| !!! | AAATTTACTTATGCATTTTA+AGG | + | chr4_2:7484543-7484562 | Msa0586380:intron | 15.0% |
| !! | TCCACAAAAAATAAAATTAA+GGG | - | chr4_2:7485479-7485498 | None:intergenic | 15.0% |
| !! | TTCCACAAAAAATAAAATTA+AGG | - | chr4_2:7485480-7485499 | None:intergenic | 15.0% |
| !!! | TTCTAGAATAAAAAATTGGT+AGG | - | chr4_2:7478734-7478753 | None:intergenic | 20.0% |
| !!! | ATTGTAGATATTTTATGAAC+CGG | + | chr4_2:7479503-7479522 | Msa0586380:intron | 20.0% |
| !!! | TAATTTTAACTTAGTAGAGA+AGG | + | chr4_2:7479565-7479584 | Msa0586380:intron | 20.0% |
| !!! | TAATATAGCTATCATACTTT+TGG | + | chr4_2:7479815-7479834 | Msa0586380:intron | 20.0% |
| !!! | AAGTGTAACTTTATTTTTAG+AGG | + | chr4_2:7480086-7480105 | Msa0586380:intron | 20.0% |
| !!! | AGTGTAACTTTATTTTTAGA+GGG | + | chr4_2:7480087-7480106 | Msa0586380:intron | 20.0% |
| !! | TTAAAAAAACAGTTATCTAC+TGG | - | chr4_2:7480169-7480188 | None:intergenic | 20.0% |
| !! | TAATTATTGGCAAAATGAAA+TGG | - | chr4_2:7480322-7480341 | None:intergenic | 20.0% |
| !! | TTTATTGCATAATGATCTAA+TGG | + | chr4_2:7480806-7480825 | Msa0586380:intron | 20.0% |
| !! | CAAAAAAAACAATAACAATC+AGG | - | chr4_2:7481145-7481164 | None:intergenic | 20.0% |
| !! | ATGATTCTAAACAAATATAG+AGG | - | chr4_2:7481179-7481198 | None:intergenic | 20.0% |
| !! | ACAATTGAACATTAGATATA+CGG | - | chr4_2:7481460-7481479 | None:intergenic | 20.0% |
| !! | TATAATAAACTTAACTTACG+TGG | + | chr4_2:7481657-7481676 | Msa0586380:intron | 20.0% |
| !! | AAAAGATAATCATGAAAACA+TGG | - | chr4_2:7482311-7482330 | None:intergenic | 20.0% |
| !!! | TTTTTGTCTTCATTTTTCAA+GGG | + | chr4_2:7482635-7482654 | Msa0586380:intron | 20.0% |
| !! | CTGTAAAAAAACTGAATATA+TGG | - | chr4_2:7482765-7482784 | None:intergenic | 20.0% |
| !!! | CATATATTCAGTTTTTTTAC+AGG | + | chr4_2:7482763-7482782 | Msa0586380:intron | 20.0% |
| !!! | TTTTCAAATAAACGTAGAAT+AGG | + | chr4_2:7483337-7483356 | Msa0586380:intron | 20.0% |
| !! | TCAATGGTAAATATTAAATG+CGG | - | chr4_2:7483572-7483591 | None:intergenic | 20.0% |
| !! | AATATTTACCATTGATGTAT+TGG | + | chr4_2:7483577-7483596 | Msa0586380:intron | 20.0% |
| !!! | TTATCTTTTGCTATAGAAAT+AGG | - | chr4_2:7484104-7484123 | None:intergenic | 20.0% |
| !! | AAATTGTTTCCATTTATAAG+CGG | + | chr4_2:7484133-7484152 | Msa0586380:intron | 20.0% |
| !!! | TTACTTTTTCTTTTTTTGAC+AGG | + | chr4_2:7484463-7484482 | Msa0586380:intron | 20.0% |
| !! | CATTATTAAATGTGAAATTG+AGG | - | chr4_2:7484748-7484767 | None:intergenic | 20.0% |
| !! | GTAATATAGGAAATAGAAAT+AGG | + | chr4_2:7485360-7485379 | Msa0586380:three_prime_UTR | 20.0% |
| !!! | TTTTAGTCATAATTCCAAAA+GGG | - | chr4_2:7485446-7485465 | None:intergenic | 20.0% |
| !!! | ATTTTAGTCATAATTCCAAA+AGG | - | chr4_2:7485447-7485466 | None:intergenic | 20.0% |
| !!! | TTTGGAATTATGACTAAAAT+AGG | + | chr4_2:7485447-7485466 | Msa0586380:intron | 20.0% |
| !!! | CTTTGATTGTTATTTTAAAG+TGG | + | chr4_2:7485618-7485637 | Msa0586380:three_prime_UTR | 20.0% |
| ! | AAAAATTGGTAGGAAATGAA+AGG | - | chr4_2:7478724-7478743 | None:intergenic | 25.0% |
| ! | AAACAAATTCGTAGATTACA+AGG | + | chr4_2:7478787-7478806 | Msa0586380:five_prime_UTR | 25.0% |
| ! | TGTAAATTCGAATAATTCGA+AGG | + | chr4_2:7478879-7478898 | Msa0586380:five_prime_UTR | 25.0% |
| !!! | TTTCTGTTTCTTTTGTTGTT+TGG | + | chr4_2:7479034-7479053 | Msa0586380:CDS | 25.0% |
| !!! | TTCTGTTTCTTTTGTTGTTT+GGG | + | chr4_2:7479035-7479054 | Msa0586380:CDS | 25.0% |
| ! | TGTATTTCTTCATTTGTTTG+TGG | + | chr4_2:7479090-7479109 | Msa0586380:intron | 25.0% |
| !!! | TTTTGTTTCAATTCTGTGTT+TGG | + | chr4_2:7479132-7479151 | Msa0586380:intron | 25.0% |
| ! | TATTAAATGTTGTCGAATAG+TGG | + | chr4_2:7479387-7479406 | Msa0586380:intron | 25.0% |
| ! | CTTGTACAATAGACTAAAAA+TGG | - | chr4_2:7479913-7479932 | None:intergenic | 25.0% |
| ! | GTATTCTATAACTACCAATT+TGG | - | chr4_2:7479982-7480001 | None:intergenic | 25.0% |
| ! | GTAGTTATAGAATACTACAA+CGG | + | chr4_2:7479987-7480006 | Msa0586380:intron | 25.0% |
| ! | ATTATTTGGCAAAACTTTGT+AGG | + | chr4_2:7480019-7480038 | Msa0586380:intron | 25.0% |
| ! | AAACTTTGTAGGATATATTG+TGG | + | chr4_2:7480030-7480049 | Msa0586380:intron | 25.0% |
| ! | AACTTTGTAGGATATATTGT+GGG | + | chr4_2:7480031-7480050 | Msa0586380:intron | 25.0% |
| !!! | AATAACTGACTTGCAAAATT+TGG | + | chr4_2:7480221-7480240 | Msa0586380:CDS | 25.0% |
| !!! | AATGGAATGGAATGTTTTTA+AGG | - | chr4_2:7480304-7480323 | None:intergenic | 25.0% |
| ! | TTCTTATGAGAAATATGCAT+GGG | + | chr4_2:7480753-7480772 | Msa0586380:CDS | 25.0% |
| ! | GAATGGTACATGATATAAAT+TGG | + | chr4_2:7480889-7480908 | Msa0586380:intron | 25.0% |
| ! | TCTTGATACACTATACATTA+TGG | + | chr4_2:7481056-7481075 | Msa0586380:CDS | 25.0% |
| ! | CTTGATACACTATACATTAT+GGG | + | chr4_2:7481057-7481076 | Msa0586380:CDS | 25.0% |
| ! | AATGTAATAAAAGCCTAACT+AGG | - | chr4_2:7481489-7481508 | None:intergenic | 25.0% |
| !! | AACCATAAGGTTACTTTATA+AGG | + | chr4_2:7481596-7481615 | Msa0586380:intron | 25.0% |
| ! | AACCTTATAAAGTAACCTTA+TGG | - | chr4_2:7481601-7481620 | None:intergenic | 25.0% |
| !!! | GACAAGTTGATTATGTTATA+AGG | - | chr4_2:7481853-7481872 | None:intergenic | 25.0% |
| ! | TTGTAGTTAACTTAACATTG+AGG | - | chr4_2:7481990-7482009 | None:intergenic | 25.0% |
| !! | AGTACTATATTTTGTTCGAA+AGG | - | chr4_2:7482129-7482148 | None:intergenic | 25.0% |
| !!! | TTCGATGTGTTTTTAATAGA+AGG | + | chr4_2:7482186-7482205 | Msa0586380:intron | 25.0% |
| !! | TTTCATGATTATCTTTTGCT+TGG | + | chr4_2:7482314-7482333 | Msa0586380:intron | 25.0% |
| ! | TAGACATGAAAAAACAATGT+AGG | + | chr4_2:7482357-7482376 | Msa0586380:intron | 25.0% |
| ! | AGACATGAAAAAACAATGTA+GGG | + | chr4_2:7482358-7482377 | Msa0586380:intron | 25.0% |
| ! | CTTGAAAAATGAAGACAAAA+AGG | - | chr4_2:7482636-7482655 | None:intergenic | 25.0% |
| !!! | CTTTTTGTCTTCATTTTTCA+AGG | + | chr4_2:7482634-7482653 | Msa0586380:intron | 25.0% |
| ! | TCTTATTCTCTGTGTTAATT+TGG | + | chr4_2:7483067-7483086 | Msa0586380:intron | 25.0% |
| ! | GTATTCATAAAAACTGCAAT+TGG | - | chr4_2:7483111-7483130 | None:intergenic | 25.0% |
| ! | ATGAATACTTGCTTAAAGTT+TGG | + | chr4_2:7483123-7483142 | Msa0586380:CDS | 25.0% |
| ! | TGAATACTTGCTTAAAGTTT+GGG | + | chr4_2:7483124-7483143 | Msa0586380:CDS | 25.0% |
| ! | TGTATAAAACATGATGAAGT+AGG | - | chr4_2:7483204-7483223 | None:intergenic | 25.0% |
| ! | ATAATTCTTTCATTGATCCA+AGG | - | chr4_2:7483269-7483288 | None:intergenic | 25.0% |
| ! | CATATATAAGTAAAGGAAGA+CGG | - | chr4_2:7483488-7483507 | None:intergenic | 25.0% |
| ! | CTTCTCACATATATAAGTAA+AGG | - | chr4_2:7483495-7483514 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | - | chr4_2:7483828-7483847 | None:intergenic | 25.0% |
| ! | TTATGAAAACCGCTTATAAA+TGG | - | chr4_2:7484145-7484164 | None:intergenic | 25.0% |
| ! | AAATACATGTAGAGTAAGTT+TGG | - | chr4_2:7484295-7484314 | None:intergenic | 25.0% |
| !! | AGAACTATTTCTTTCATTCT+GGG | + | chr4_2:7484432-7484451 | Msa0586380:intron | 25.0% |
| !!! | TTTTTCTTTTTTTGACAGGA+AGG | + | chr4_2:7484467-7484486 | Msa0586380:intron | 25.0% |
| ! | GATGCACATAGTATTAATTT+GGG | - | chr4_2:7484887-7484906 | None:intergenic | 25.0% |
| ! | TGATGCACATAGTATTAATT+TGG | - | chr4_2:7484888-7484907 | None:intergenic | 25.0% |
| !! | CAAAAATCTTTTCCTAGAAT+AGG | + | chr4_2:7485141-7485160 | Msa0586380:CDS | 25.0% |
| ! | CTTCAAATGATGAGTAATAT+AGG | + | chr4_2:7485347-7485366 | Msa0586380:three_prime_UTR | 25.0% |
| ! | ATTATGACTAAAATAGGTTG+TGG | + | chr4_2:7485453-7485472 | Msa0586380:intron | 25.0% |
| !!! | GCCCTTAATTTTATTTTTTG+TGG | + | chr4_2:7485475-7485494 | Msa0586380:three_prime_UTR | 25.0% |
| ! | TATGAAATGCACTCAAAATT+TGG | - | chr4_2:7485503-7485522 | None:intergenic | 25.0% |
| ! | CTTATAGTATCTGTATTCTA+TGG | - | chr4_2:7485564-7485583 | None:intergenic | 25.0% |
| ! | GAATTTGTTTGTCTGATGAA+GGG | - | chr4_2:7478777-7478796 | None:intergenic | 30.0% |
| TTCAATTTCCCTTGTCTTTA+AGG | + | chr4_2:7478828-7478847 | Msa0586380:five_prime_UTR | 30.0% | |
| CAAATGAAGAAATACATACC+TGG | - | chr4_2:7479086-7479105 | None:intergenic | 30.0% | |
| !! | AGAAGAGTGTTGTTAAATAG+AGG | + | chr4_2:7479290-7479309 | Msa0586380:intron | 30.0% |
| TTGTTAAATAGAGGCTATGA+TGG | + | chr4_2:7479299-7479318 | Msa0586380:intron | 30.0% | |
| TTCATAAGTACTTCTTGAGA+AGG | + | chr4_2:7479791-7479810 | Msa0586380:intron | 30.0% | |
| ! | TATAGCTATCATACTTTTGG+AGG | + | chr4_2:7479818-7479837 | Msa0586380:intron | 30.0% |
| CGTATATGCAAAATTGAGTA+TGG | + | chr4_2:7479846-7479865 | Msa0586380:intron | 30.0% | |
| TAACTACCAATTTGGTTGTT+TGG | - | chr4_2:7479974-7479993 | None:intergenic | 30.0% | |
| TTATAGAATACTACAACGGT+GGG | + | chr4_2:7479991-7480010 | Msa0586380:intron | 30.0% | |
| !! | TTTTTGGCACTTGAATAACT+AGG | + | chr4_2:7480131-7480150 | Msa0586380:intron | 30.0% |
| ATTGGCAAAATGAAATGGAA+TGG | - | chr4_2:7480317-7480336 | None:intergenic | 30.0% | |
| AATGAAAAGAAGGAATGAGA+TGG | + | chr4_2:7480344-7480363 | Msa0586380:intron | 30.0% | |
| ! | GTTTTCAATCAGTACAAAGT+AGG | - | chr4_2:7480401-7480420 | None:intergenic | 30.0% |
| GTTCTTATGAGAAATATGCA+TGG | + | chr4_2:7480752-7480771 | Msa0586380:CDS | 30.0% | |
| TCTTATGAGAAATATGCATG+GGG | + | chr4_2:7480754-7480773 | Msa0586380:CDS | 30.0% | |
| ACTGATTGTATCTTCTTGAA+TGG | + | chr4_2:7480872-7480891 | Msa0586380:intron | 30.0% | |
| ! | AAACAAATATAGAGGTGTGA+CGG | - | chr4_2:7481171-7481190 | None:intergenic | 30.0% |
| ! | TGTTTAGAATCATAGTGATC+AGG | + | chr4_2:7481186-7481205 | Msa0586380:intron | 30.0% |
| !! | CAATTTTATTGCTGTTCTAG+AGG | + | chr4_2:7481291-7481310 | Msa0586380:intron | 30.0% |
| !! | GTTATGGTGTTTAACTTGTA+TGG | + | chr4_2:7481325-7481344 | Msa0586380:intron | 30.0% |
| GCAGCAATAAAGAGTTAAAT+AGG | - | chr4_2:7481379-7481398 | None:intergenic | 30.0% | |
| TAATACATTATCCTTACAGC+TGG | + | chr4_2:7481520-7481539 | Msa0586380:intron | 30.0% | |
| AATACATTATCCTTACAGCT+GGG | + | chr4_2:7481521-7481540 | Msa0586380:intron | 30.0% | |
| !! | AAACTCTCTGGATTTTAACA+AGG | + | chr4_2:7481548-7481567 | Msa0586380:CDS | 30.0% |
| ATGTTATAAGGAATTCCTGT+AGG | - | chr4_2:7481841-7481860 | None:intergenic | 30.0% | |
| AACATAATCAACTTGTCACA+AGG | + | chr4_2:7481856-7481875 | Msa0586380:CDS | 30.0% | |
| ACAACGAACACTTAAGATTT+AGG | + | chr4_2:7481941-7481960 | Msa0586380:intron | 30.0% | |
| ATATTGCTTTCATGTTCCAT+AGG | + | chr4_2:7481964-7481983 | Msa0586380:intron | 30.0% | |
| GACACAAAAGTTGTAAAGAA+TGG | - | chr4_2:7482014-7482033 | None:intergenic | 30.0% | |
| !! | AAGCTTTAAGGTTAAGATCA+AGG | - | chr4_2:7482066-7482085 | None:intergenic | 30.0% |
| TTGATCTTAACCTTAAAGCT+TGG | + | chr4_2:7482065-7482084 | Msa0586380:intron | 30.0% | |
| TGATCAATACTTAGCAAGAA+AGG | - | chr4_2:7482385-7482404 | None:intergenic | 30.0% | |
| !!! | GATGAAATGCTATTTTTCCA+CGG | - | chr4_2:7482434-7482453 | None:intergenic | 30.0% |
| CATCTCCATATTTGTATTAG+AGG | + | chr4_2:7482450-7482469 | Msa0586380:intron | 30.0% | |
| !!! | ATTCAGTTTTTTTACAGGGA+AGG | + | chr4_2:7482768-7482787 | Msa0586380:intron | 30.0% |
| !!! | TTCAGTTTTTTTACAGGGAA+GGG | + | chr4_2:7482769-7482788 | Msa0586380:intron | 30.0% |
| AATAAAACATTCCCTGATGA+TGG | + | chr4_2:7482872-7482891 | Msa0586380:CDS | 30.0% | |
| CTATGAGGATTGATATAGAT+AGG | - | chr4_2:7482905-7482924 | None:intergenic | 30.0% | |
| ATCTATATCAATCCTCATAG+TGG | + | chr4_2:7482905-7482924 | Msa0586380:CDS | 30.0% | |
| ! | GCTTTTATCGTGTAAAAAGA+TGG | - | chr4_2:7482996-7483015 | None:intergenic | 30.0% |
| TTCTTTAGTTAGTACTGTCT+GGG | + | chr4_2:7483025-7483044 | Msa0586380:intron | 30.0% | |
| ATAAAACATGATGAAGTAGG+TGG | - | chr4_2:7483201-7483220 | None:intergenic | 30.0% | |
| TCATTTGAATGATAGTTCCT+TGG | + | chr4_2:7483249-7483268 | Msa0586380:intron | 30.0% | |
| !! | ATCTCTAAAACAGAGATATG+TGG | + | chr4_2:7483417-7483436 | Msa0586380:intron | 30.0% |
| !! | TCTCTAAAACAGAGATATGT+GGG | + | chr4_2:7483418-7483437 | Msa0586380:intron | 30.0% |
| AAGGTCTGTTAAGTTTGATT+CGG | + | chr4_2:7483453-7483472 | Msa0586380:CDS | 30.0% | |
| ACTTTCATCCAATACATCAA+TGG | - | chr4_2:7483588-7483607 | None:intergenic | 30.0% | |
| ! | CATGGCTTTTGTATATTGAT+AGG | - | chr4_2:7483810-7483829 | None:intergenic | 30.0% |
| CAATATACAAAAGCCATGTT+TGG | + | chr4_2:7483812-7483831 | Msa0586380:intron | 30.0% | |
| TGCTTATAGTATAAGCACTA+AGG | + | chr4_2:7483853-7483872 | Msa0586380:intron | 30.0% | |
| TTATAGTATAAGCACTAAGG+AGG | + | chr4_2:7483856-7483875 | Msa0586380:intron | 30.0% | |
| TATAGTATAAGCACTAAGGA+GGG | + | chr4_2:7483857-7483876 | Msa0586380:intron | 30.0% | |
| GGTTAGTGCTTATACTATAA+GGG | - | chr4_2:7484053-7484072 | None:intergenic | 30.0% | |
| TGGTTAGTGCTTATACTATA+AGG | - | chr4_2:7484054-7484073 | None:intergenic | 30.0% | |
| !! | CTAACACAAAAGCATTTACA+TGG | - | chr4_2:7484074-7484093 | None:intergenic | 30.0% |
| ACTTAATTGAACTAATCGAC+TGG | - | chr4_2:7484268-7484287 | None:intergenic | 30.0% | |
| GTATGACAACTTCATAAAGA+CGG | - | chr4_2:7484337-7484356 | None:intergenic | 30.0% | |
| !! | CTAATTTTGTTGGAGTTGAT+TGG | - | chr4_2:7484406-7484425 | None:intergenic | 30.0% |
| ! | GAGAACTATTTCTTTCATTC+TGG | + | chr4_2:7484431-7484450 | Msa0586380:intron | 30.0% |
| ! | GAACTATTTCTTTCATTCTG+GGG | + | chr4_2:7484433-7484452 | Msa0586380:intron | 30.0% |
| !!! | AGACATTTTTTTTGCCGAAA+TGG | - | chr4_2:7484824-7484843 | None:intergenic | 30.0% |
| TTGAATACCCATTCATCTAA+TGG | - | chr4_2:7485051-7485070 | None:intergenic | 30.0% | |
| ! | TTCTCATTTGAGTTCTTAAC+AGG | - | chr4_2:7485120-7485139 | None:intergenic | 30.0% |
| ! | AAATCTTTTCCTAGAATAGG+TGG | + | chr4_2:7485144-7485163 | Msa0586380:CDS | 30.0% |
| GTCTTCATATCTTGCAAAAT+GGG | + | chr4_2:7485382-7485401 | Msa0586380:intron | 30.0% | |
| ! | TTGCAAAATGGGTTTATTCA+AGG | + | chr4_2:7485393-7485412 | Msa0586380:intron | 30.0% |
| ATACATGATTTATGTAACCG+AGG | + | chr4_2:7485520-7485539 | Msa0586380:three_prime_UTR | 30.0% | |
| !!! | GACTTGACTTTGGTTTTCTA+CGG | - | chr4_2:7478611-7478630 | None:intergenic | 35.0% |
| ! | CGAATTTGTTTGTCTGATGA+AGG | - | chr4_2:7478778-7478797 | None:intergenic | 35.0% |
| CCAAACAACCTTAAAGACAA+GGG | - | chr4_2:7478839-7478858 | None:intergenic | 35.0% | |
| ACCAAACAACCTTAAAGACA+AGG | - | chr4_2:7478840-7478859 | None:intergenic | 35.0% | |
| ATCTTTGTAAAATGGCGAGA+GGG | + | chr4_2:7478911-7478930 | Msa0586380:exon | 35.0% | |
| TGAGTAGTAGTAGCAGTAAA+TGG | + | chr4_2:7478944-7478963 | Msa0586380:CDS | 35.0% | |
| AACTTTAGTCAGAGAATACC+AGG | + | chr4_2:7479065-7479084 | Msa0586380:CDS | 35.0% | |
| TGTTAGAGCCCTTAGTTTAT+GGG | + | chr4_2:7479229-7479248 | Msa0586380:intron | 35.0% | |
| !! | AAGAAGCACCCATAAACTAA+GGG | - | chr4_2:7479240-7479259 | None:intergenic | 35.0% |
| !! | TAAGAAGCACCCATAAACTA+AGG | - | chr4_2:7479241-7479260 | None:intergenic | 35.0% |
| GGGTGCTTCTTAGATAAAAT+AGG | + | chr4_2:7479249-7479268 | Msa0586380:intron | 35.0% | |
| CTAAGCAGTATTATCATTCG+CGG | - | chr4_2:7479466-7479485 | None:intergenic | 35.0% | |
| TGATACTGACATGTGAACAT+CGG | + | chr4_2:7479646-7479665 | Msa0586380:intron | 35.0% | |
| AATTGAATCCACATGTGCAT+TGG | + | chr4_2:7479691-7479710 | Msa0586380:intron | 35.0% | |
| ! | TCAGACTATAGGTTGAGAAT+AGG | + | chr4_2:7479880-7479899 | Msa0586380:intron | 35.0% |
| ! | CAGACTATAGGTTGAGAATA+GGG | + | chr4_2:7479881-7479900 | Msa0586380:intron | 35.0% |
| GTTATAGAATACTACAACGG+TGG | + | chr4_2:7479990-7480009 | Msa0586380:intron | 35.0% | |
| CAATCAGTACAAAGTAGGAA+TGG | - | chr4_2:7480396-7480415 | None:intergenic | 35.0% | |
| GCAATTGGAATTGTTTCAGT+TGG | + | chr4_2:7480585-7480604 | Msa0586380:intron | 35.0% | |
| GAAGAGTCAAATAAAGTGCA+CGG | + | chr4_2:7480607-7480626 | Msa0586380:CDS | 35.0% | |
| ATCATCCAAGACTTCTTTAG+TGG | - | chr4_2:7480677-7480696 | None:intergenic | 35.0% | |
| !!! | CTTTTACTTTTTCCCTTCTC+TGG | - | chr4_2:7480711-7480730 | None:intergenic | 35.0% |
| AATGATCTAATGGAGTGATG+TGG | + | chr4_2:7480816-7480835 | Msa0586380:intron | 35.0% | |
| AATGGAGTGATGTGGTTATT+TGG | + | chr4_2:7480824-7480843 | Msa0586380:intron | 35.0% | |
| ! | AAAAGTGGTGTCAATAGCTT+TGG | + | chr4_2:7481006-7481025 | Msa0586380:CDS | 35.0% |
| AAAAGGTTACACTTACTCTC+GGG | - | chr4_2:7481106-7481125 | None:intergenic | 35.0% | |
| GAAAAGGTTACACTTACTCT+CGG | - | chr4_2:7481107-7481126 | None:intergenic | 35.0% | |
| !! | TGTTCTAGAGGAACATTTCA+TGG | + | chr4_2:7481303-7481322 | Msa0586380:intron | 35.0% |
| AGAGGAACATTTCATGGTTA+TGG | + | chr4_2:7481309-7481328 | Msa0586380:intron | 35.0% | |
| CAATTGTGATACTCCTAGTT+AGG | + | chr4_2:7481473-7481492 | Msa0586380:intron | 35.0% | |
| AAAGATCGTATGTGCTAAGA+AGG | - | chr4_2:7481750-7481769 | None:intergenic | 35.0% | |
| !! | CAATATCTCTAGCTTTGTCA+AGG | - | chr4_2:7481789-7481808 | None:intergenic | 35.0% |
| TAACTTAACATTGAGGCCTA+TGG | - | chr4_2:7481983-7482002 | None:intergenic | 35.0% | |
| ACCTTAAAGCTTGGATATTG+TGG | + | chr4_2:7482074-7482093 | Msa0586380:intron | 35.0% | |
| ! | TAGTACTAGCTTGATGACAT+TGG | + | chr4_2:7482142-7482161 | Msa0586380:intron | 35.0% |
| !!! | ACATTGGATCTGCTATTTTG+TGG | + | chr4_2:7482158-7482177 | Msa0586380:intron | 35.0% |
| CCACGGATAAAATTAGAAAG+CGG | - | chr4_2:7482417-7482436 | None:intergenic | 35.0% | |
| CCATGCCTCTAATACAAATA+TGG | - | chr4_2:7482458-7482477 | None:intergenic | 35.0% | |
| CCATATTTGTATTAGAGGCA+TGG | + | chr4_2:7482455-7482474 | Msa0586380:intron | 35.0% | |
| ! | TTTGTATTAGAGGCATGGAT+TGG | + | chr4_2:7482460-7482479 | Msa0586380:intron | 35.0% |
| !!! | CATGCCTGATTTTAGTTCTA+CGG | + | chr4_2:7482509-7482528 | Msa0586380:intron | 35.0% |
| !!! | ATGCCTGATTTTAGTTCTAC+GGG | + | chr4_2:7482510-7482529 | Msa0586380:intron | 35.0% |
| !!! | TTTCAAGGGTGAGAGTATTT+TGG | + | chr4_2:7482649-7482668 | Msa0586380:intron | 35.0% |
| AGCAATGAACTCTAGTTGTT+CGG | - | chr4_2:7482687-7482706 | None:intergenic | 35.0% | |
| AGTTCATTGCTCTATCTCAA+AGG | + | chr4_2:7482696-7482715 | Msa0586380:CDS | 35.0% | |
| !!! | TCAGTTTTTTTACAGGGAAG+GGG | + | chr4_2:7482770-7482789 | Msa0586380:intron | 35.0% |
| ATTCTCAACCTGAAAAAGCA+GGG | - | chr4_2:7482837-7482856 | None:intergenic | 35.0% | |
| TAGGAAGTAATCCATCATCA+GGG | - | chr4_2:7482886-7482905 | None:intergenic | 35.0% | |
| ATAGGAAGTAATCCATCATC+AGG | - | chr4_2:7482887-7482906 | None:intergenic | 35.0% | |
| CTTCTTTAGTTAGTACTGTC+TGG | + | chr4_2:7483024-7483043 | Msa0586380:intron | 35.0% | |
| TTGCTTAAAGTTTGGGTACA+AGG | + | chr4_2:7483131-7483150 | Msa0586380:CDS | 35.0% | |
| TGCTTAAAGTTTGGGTACAA+GGG | + | chr4_2:7483132-7483151 | Msa0586380:CDS | 35.0% | |
| CTCCAGCTGTAAAACTTTAT+AGG | + | chr4_2:7483162-7483181 | Msa0586380:CDS | 35.0% | |
| ! | CACCTATAAAGTTTTACAGC+TGG | - | chr4_2:7483167-7483186 | None:intergenic | 35.0% |
| ATGTGGGAGAAATCAATGAA+AGG | + | chr4_2:7483434-7483453 | Msa0586380:CDS | 35.0% | |
| ATGATTCTGCATTGCAATAC+TGG | + | chr4_2:7483541-7483560 | Msa0586380:intron | 35.0% | |
| ATAAACTTCTGCGAATCATC+AGG | - | chr4_2:7483702-7483721 | None:intergenic | 35.0% | |
| ! | GCACATTAAGGCTTTTCAAA+TGG | - | chr4_2:7483755-7483774 | None:intergenic | 35.0% |
| TCAACAGAACAAGCACATTA+AGG | - | chr4_2:7483767-7483786 | None:intergenic | 35.0% | |
| ATAGTATAAGCACTAAGGAG+GGG | + | chr4_2:7483858-7483877 | Msa0586380:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr4_2:7483954-7483973 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr4_2:7483953-7483972 | Msa0586380:intron | 35.0% | |
| TAAACACTTGTGAGATGGTT+TGG | - | chr4_2:7484243-7484262 | None:intergenic | 35.0% | |
| TCAACTCCAACAAAATTAGC+TGG | + | chr4_2:7484407-7484426 | Msa0586380:intron | 35.0% | |
| ! | TTCTCTCCAGCTAATTTTGT+TGG | - | chr4_2:7484416-7484435 | None:intergenic | 35.0% |
| !!! | TTCTTTTTTTGACAGGAAGG+AGG | + | chr4_2:7484470-7484489 | Msa0586380:intron | 35.0% |
| !! | CATTTTAAGGACATGAGTGT+GGG | + | chr4_2:7484556-7484575 | Msa0586380:intron | 35.0% |
| ! | TTGAGTCACTCTTTTACCTT+TGG | + | chr4_2:7484611-7484630 | Msa0586380:CDS | 35.0% |
| CAACAAGACATACCAAGATT+GGG | + | chr4_2:7484645-7484664 | Msa0586380:CDS | 35.0% | |
| AACAAGACATACCAAGATTG+GGG | + | chr4_2:7484646-7484665 | Msa0586380:CDS | 35.0% | |
| ATATATTCCAACCCCAATCT+TGG | - | chr4_2:7484660-7484679 | None:intergenic | 35.0% | |
| TTTAACACCAGTGTTAACCT+GGG | - | chr4_2:7484950-7484969 | None:intergenic | 35.0% | |
| GGTCATTCCATTAGATGAAT+GGG | + | chr4_2:7485041-7485060 | Msa0586380:CDS | 35.0% | |
| TCTTTGAATCTTGGTTGAAG+TGG | - | chr4_2:7485234-7485253 | None:intergenic | 35.0% | |
| AATTCCTCGTCTTTGAATCT+TGG | - | chr4_2:7485243-7485262 | None:intergenic | 35.0% | |
| ! | ACGAGGAATTTGTTCCATTA+TGG | + | chr4_2:7485253-7485272 | Msa0586380:three_prime_UTR | 35.0% |
| ACATCTTACAAGCTCCATAA+TGG | - | chr4_2:7485270-7485289 | None:intergenic | 35.0% | |
| AGATGTCAGAATTCCTTCAT+TGG | + | chr4_2:7485284-7485303 | Msa0586380:three_prime_UTR | 35.0% | |
| GATGTCAGAATTCCTTCATT+GGG | + | chr4_2:7485285-7485304 | Msa0586380:three_prime_UTR | 35.0% | |
| GGTCTTCATATCTTGCAAAA+TGG | + | chr4_2:7485381-7485400 | Msa0586380:intron | 35.0% | |
| TATGGAATGCGCAGATATAT+AGG | - | chr4_2:7485546-7485565 | None:intergenic | 35.0% | |
| !!! | GACTTTGGTTTTCTACGGAA+TGG | - | chr4_2:7478606-7478625 | None:intergenic | 40.0% |
| CGAAGAAGAAGACTTGACTT+TGG | - | chr4_2:7478621-7478640 | None:intergenic | 40.0% | |
| ! | AATTTCGAAGCCACTCCTTT+TGG | + | chr4_2:7478682-7478701 | Msa0586380:five_prime_UTR | 40.0% |
| !! | CCCTTGTCTTTAAGGTTGTT+TGG | + | chr4_2:7478836-7478855 | Msa0586380:five_prime_UTR | 40.0% |
| GATCTTTGTAAAATGGCGAG+AGG | + | chr4_2:7478910-7478929 | Msa0586380:exon | 40.0% | |
| ! | AAAAGCATAGCAAGACGCTT+TGG | - | chr4_2:7479003-7479022 | None:intergenic | 40.0% |
| ACACTGACACTTCTGATTGA+AGG | + | chr4_2:7479181-7479200 | Msa0586380:intron | 40.0% | |
| ! | CATAAACTAAGGGCTCTAAC+AGG | - | chr4_2:7479230-7479249 | None:intergenic | 40.0% |
| CTGTTAGAGCCCTTAGTTTA+TGG | + | chr4_2:7479228-7479247 | Msa0586380:intron | 40.0% | |
| CGCGAATGATAATACTGCTT+AGG | + | chr4_2:7479464-7479483 | Msa0586380:intron | 40.0% | |
| TTCGAAGTTCTCTCATTCAC+CGG | - | chr4_2:7479525-7479544 | None:intergenic | 40.0% | |
| ! | CTTCAAATTGAAGGTGTGTC+TGG | - | chr4_2:7479730-7479749 | None:intergenic | 40.0% |
| TGCTGCTGAAATCAGACTAT+AGG | + | chr4_2:7479869-7479888 | Msa0586380:intron | 40.0% | |
| TACCAATTTGGTTGTTTGGC+AGG | - | chr4_2:7479970-7479989 | None:intergenic | 40.0% | |
| TGAGATGGTCTGCATACATT+TGG | + | chr4_2:7480359-7480378 | Msa0586380:intron | 40.0% | |
| TACAAAGTAGGAATGGTGTC+AGG | - | chr4_2:7480389-7480408 | None:intergenic | 40.0% | |
| TTGTCGTCTGTCAAACAATC+TGG | + | chr4_2:7480433-7480452 | Msa0586380:intron | 40.0% | |
| !! | GGAAAGTGTTCACTTGCTAA+TGG | - | chr4_2:7480482-7480501 | None:intergenic | 40.0% |
| CAAGTCCACTAAAGAAGTCT+TGG | + | chr4_2:7480669-7480688 | Msa0586380:CDS | 40.0% | |
| ATCCCATTGATATCCAGAGA+AGG | + | chr4_2:7480695-7480714 | Msa0586380:CDS | 40.0% | |
| TCCCATTGATATCCAGAGAA+GGG | + | chr4_2:7480696-7480715 | Msa0586380:CDS | 40.0% | |
| TCCCTTCTCTGGATATCAAT+GGG | - | chr4_2:7480700-7480719 | None:intergenic | 40.0% | |
| TTCCCTTCTCTGGATATCAA+TGG | - | chr4_2:7480701-7480720 | None:intergenic | 40.0% | |
| AAGATGCAATGCTTCATGCT+TGG | + | chr4_2:7480728-7480747 | Msa0586380:CDS | 40.0% | |
| GACAAGATGAACTACAGGTA+TGG | + | chr4_2:7480776-7480795 | Msa0586380:intron | 40.0% | |
| !!! | TTGACACCACTTTTTGACTG+TGG | - | chr4_2:7481000-7481019 | None:intergenic | 40.0% |
| AATCAGGTCTTCATATGCAG+GGG | - | chr4_2:7481129-7481148 | None:intergenic | 40.0% | |
| CAATCAGGTCTTCATATGCA+GGG | - | chr4_2:7481130-7481149 | None:intergenic | 40.0% | |
| ACAATCAGGTCTTCATATGC+AGG | - | chr4_2:7481131-7481150 | None:intergenic | 40.0% | |
| !! | GTGTTTTCGAGACAACCATA+AGG | + | chr4_2:7481583-7481602 | Msa0586380:CDS | 40.0% |
| CTTAGCACATACGATCTTTC+AGG | + | chr4_2:7481751-7481770 | Msa0586380:CDS | 40.0% | |
| ! | CTTTTGTGTCCATAGAGATG+TGG | + | chr4_2:7482024-7482043 | Msa0586380:intron | 40.0% |
| ! | CATAGAGATGTGGCTTTTGT+GGG | + | chr4_2:7482034-7482053 | Msa0586380:intron | 40.0% |
| GCCACAATATCCAAGCTTTA+AGG | - | chr4_2:7482078-7482097 | None:intergenic | 40.0% | |
| ! | CCGCTTTCTAATTTTATCCG+TGG | + | chr4_2:7482414-7482433 | Msa0586380:intron | 40.0% |
| ACTCCCGTAGAACTAAAATC+AGG | - | chr4_2:7482516-7482535 | None:intergenic | 40.0% | |
| !!! | TAGTTTTGGATTCCTGACTC+TGG | + | chr4_2:7482563-7482582 | Msa0586380:intron | 40.0% |
| !!! | GAGAGTATTTTGGCAGATTC+TGG | + | chr4_2:7482659-7482678 | Msa0586380:CDS | 40.0% |
| ATTGCTCTATCTCAAAGGAC+CGG | + | chr4_2:7482701-7482720 | Msa0586380:CDS | 40.0% | |
| AAACCTTCCGCTGATACTTT+GGG | - | chr4_2:7482730-7482749 | None:intergenic | 40.0% | |
| AAAACCTTCCGCTGATACTT+TGG | - | chr4_2:7482731-7482750 | None:intergenic | 40.0% | |
| !!! | CAGTTTTTTTACAGGGAAGG+GGG | + | chr4_2:7482771-7482790 | Msa0586380:intron | 40.0% |
| CATTCTCAACCTGAAAAAGC+AGG | - | chr4_2:7482838-7482857 | None:intergenic | 40.0% | |
| ! | AATCCTCATAGTGGAACAAC+AGG | + | chr4_2:7482914-7482933 | Msa0586380:CDS | 40.0% |
| GTGTTAATACCTATCACCCA+TGG | - | chr4_2:7482963-7482982 | None:intergenic | 40.0% | |
| ! | GCAGAAGTTTATGTCACTTG+CGG | + | chr4_2:7483710-7483729 | Msa0586380:CDS | 40.0% |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr4_2:7483903-7483922 | Msa0586380:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr4_2:7483947-7483966 | Msa0586380:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr4_2:7483948-7483967 | Msa0586380:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr4_2:7483979-7483998 | Msa0586380:intron | 40.0% | |
| CTTATACTATAAGGGCAACC+CGG | - | chr4_2:7484045-7484064 | None:intergenic | 40.0% | |
| TGGCATAAACACTTGTGAGA+TGG | - | chr4_2:7484248-7484267 | None:intergenic | 40.0% | |
| ! | GACTTTATTTGCAGCTTGCT+TGG | + | chr4_2:7484363-7484382 | Msa0586380:intron | 40.0% |
| ! | CTATTTCTTTCATTCTGGGG+AGG | + | chr4_2:7484436-7484455 | Msa0586380:intron | 40.0% |
| !! | GCATTTTAAGGACATGAGTG+TGG | + | chr4_2:7484555-7484574 | Msa0586380:intron | 40.0% |
| ! | ATCTTGGTATGTCTTGTTGC+CGG | - | chr4_2:7484644-7484663 | None:intergenic | 40.0% |
| GCAACAAGACATACCAAGAT+TGG | + | chr4_2:7484644-7484663 | Msa0586380:CDS | 40.0% | |
| !! | TCCCATATTGAGTGCCATTT+CGG | + | chr4_2:7484807-7484826 | Msa0586380:intron | 40.0% |
| CTTTAACACCAGTGTTAACC+TGG | - | chr4_2:7484951-7484970 | None:intergenic | 40.0% | |
| GATGCAAAGTTTCTTTCTCG+CGG | + | chr4_2:7484978-7484997 | Msa0586380:CDS | 40.0% | |
| ! | TCTTCTCTTTTCGCCTTCTT+CGG | + | chr4_2:7485020-7485039 | Msa0586380:CDS | 40.0% |
| TCTAATGGAATGACCGAAGA+AGG | - | chr4_2:7485036-7485055 | None:intergenic | 40.0% | |
| CGGTCATTCCATTAGATGAA+TGG | + | chr4_2:7485040-7485059 | Msa0586380:CDS | 40.0% | |
| TCCTTGTCACAATCCTCAAA+GGG | - | chr4_2:7485086-7485105 | None:intergenic | 40.0% | |
| TTCCTTGTCACAATCCTCAA+AGG | - | chr4_2:7485087-7485106 | None:intergenic | 40.0% | |
| TCATGGTAGACAAGCATGAA+CGG | - | chr4_2:7485199-7485218 | None:intergenic | 40.0% | |
| AGTGGTTCATCAACTAGTCA+TGG | - | chr4_2:7485216-7485235 | None:intergenic | 40.0% | |
| TCAACCAAGATTCAAAGACG+AGG | + | chr4_2:7485236-7485255 | Msa0586380:three_prime_UTR | 40.0% | |
| TCACAATTGCTTCCCAATGA+AGG | - | chr4_2:7485300-7485319 | None:intergenic | 40.0% | |
| TTGGGAAGCAATTGTGAAAC+AGG | + | chr4_2:7485303-7485322 | Msa0586380:three_prime_UTR | 40.0% | |
| TGGGTTTATTCAAGGTGACT+TGG | + | chr4_2:7485401-7485420 | Msa0586380:intron | 40.0% | |
| AGGGTCAGTCATCAACAAAA+AGG | - | chr4_2:7485427-7485446 | None:intergenic | 40.0% | |
| !!! | TTGTTGATGACTGACCCTTT+TGG | + | chr4_2:7485429-7485448 | Msa0586380:intron | 40.0% |
| GACAACGAAGCCAATCCAAA+AGG | - | chr4_2:7478700-7478719 | None:intergenic | 45.0% | |
| GGACGCTTCAAGTAATAAGC+TGG | - | chr4_2:7478982-7479001 | None:intergenic | 45.0% | |
| !! | TGTGTAGCTTTGTTGCGTAG+CGG | + | chr4_2:7479411-7479430 | Msa0586380:intron | 45.0% |
| GTCAGTATCACTGTCATGTC+CGG | - | chr4_2:7479636-7479655 | None:intergenic | 45.0% | |
| GCAACGACGCTTCAAATTGA+AGG | - | chr4_2:7479739-7479758 | None:intergenic | 45.0% | |
| CTCCTGCCAAACAACCAAAT+TGG | + | chr4_2:7479965-7479984 | Msa0586380:intron | 45.0% | |
| !! | AACGGTGGGTGCTGATTATT+TGG | + | chr4_2:7480005-7480024 | Msa0586380:intron | 45.0% |
| TGACAGACGACAATTCACGT+CGG | - | chr4_2:7480426-7480445 | None:intergenic | 45.0% | |
| GCAAGTGAACACTTTCCTTG+TGG | + | chr4_2:7480485-7480504 | Msa0586380:intron | 45.0% | |
| TTTCCTTGTGGCTGTGTTAC+AGG | + | chr4_2:7480497-7480516 | Msa0586380:intron | 45.0% | |
| TTCCTTGTGGCTGTGTTACA+GGG | + | chr4_2:7480498-7480517 | Msa0586380:intron | 45.0% | |
| ! | TTCTTTGGGGGCTAAGCAAT+TGG | + | chr4_2:7480570-7480589 | Msa0586380:intron | 45.0% |
| GAGTCAAATAAAGTGCACGG+TGG | + | chr4_2:7480610-7480629 | Msa0586380:CDS | 45.0% | |
| ATGGGGACAAGATGAACTAC+AGG | + | chr4_2:7480771-7480790 | Msa0586380:CDS | 45.0% | |
| TACCAGCCACAGTCAAAAAG+TGG | + | chr4_2:7480991-7481010 | Msa0586380:intron | 45.0% | |
| !! | AGTGGTGTCAATAGCTTTGG+AGG | + | chr4_2:7481009-7481028 | Msa0586380:CDS | 45.0% |
| !! | GTCAATAGCTTTGGAGGTCT+TGG | + | chr4_2:7481015-7481034 | Msa0586380:CDS | 45.0% |
| GTCTTCATATGCAGGGGAAA+AGG | - | chr4_2:7481123-7481142 | None:intergenic | 45.0% | |
| TCACCACAATCCAGAGTAGT+AGG | + | chr4_2:7481721-7481740 | Msa0586380:intron | 45.0% | |
| CAGATAGATTACTGCCTGCA+TGG | + | chr4_2:7481809-7481828 | Msa0586380:CDS | 45.0% | |
| CCACAAAAGCCACATCTCTA+TGG | - | chr4_2:7482036-7482055 | None:intergenic | 45.0% | |
| ! | CCATAGAGATGTGGCTTTTG+TGG | + | chr4_2:7482033-7482052 | Msa0586380:intron | 45.0% |
| !!! | TTTTTTTACAGGGAAGGGGG+AGG | + | chr4_2:7482774-7482793 | Msa0586380:intron | 45.0% |
| !!! | GATTTGCTCCCTGCTTTTTC+AGG | + | chr4_2:7482826-7482845 | Msa0586380:intron | 45.0% |
| TAGCCTGTTGTTCCACTATG+AGG | - | chr4_2:7482920-7482939 | None:intergenic | 45.0% | |
| GGCTACTCTCCTATCACATT+TGG | + | chr4_2:7482935-7482954 | Msa0586380:CDS | 45.0% | |
| TTCATCCATCTGCAGGTACT+CGG | - | chr4_2:7483628-7483647 | None:intergenic | 45.0% | |
| ATGCTAGTTCATCCATCTGC+AGG | - | chr4_2:7483635-7483654 | None:intergenic | 45.0% | |
| AACTAGCATGCTTTGCTCCA+GGG | + | chr4_2:7483646-7483665 | Msa0586380:CDS | 45.0% | |
| !! | ATGCTTGCTTTGGGATCATC+TGG | + | chr4_2:7483669-7483688 | Msa0586380:CDS | 45.0% |
| !! | GCTTTGGGATCATCTGGTTA+TGG | + | chr4_2:7483675-7483694 | Msa0586380:CDS | 45.0% |
| ! | GTTTATGTCACTTGCGGAAG+AGG | + | chr4_2:7483716-7483735 | Msa0586380:CDS | 45.0% |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr4_2:7483909-7483928 | Msa0586380:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr4_2:7483910-7483929 | Msa0586380:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_2:7483943-7483962 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr4_2:7483975-7483994 | Msa0586380:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr4_2:7483978-7483997 | Msa0586380:intron | 45.0% | |
| ! | CTTGTGAGATGGTTTGGAAG+AGG | - | chr4_2:7484237-7484256 | None:intergenic | 45.0% |
| AAGAGTGACTCAACTGTCTC+TGG | - | chr4_2:7484604-7484623 | None:intergenic | 45.0% | |
| ! | TTTTACCTTTGGCGCCTAAC+CGG | + | chr4_2:7484622-7484641 | Msa0586380:CDS | 45.0% |
| AGACATACCAAGATTGGGGT+TGG | + | chr4_2:7484650-7484669 | Msa0586380:CDS | 45.0% | |
| GAAGAACTCTCGCATAGAGT+CGG | + | chr4_2:7484693-7484712 | Msa0586380:CDS | 45.0% | |
| AAGAACTCTCGCATAGAGTC+GGG | + | chr4_2:7484694-7484713 | Msa0586380:CDS | 45.0% | |
| GCCGAAATGGCACTCAATAT+GGG | - | chr4_2:7484811-7484830 | None:intergenic | 45.0% | |
| TGCCGAAATGGCACTCAATA+TGG | - | chr4_2:7484812-7484831 | None:intergenic | 45.0% | |
| ATGTTGTTGTCTCACTTCCC+AGG | + | chr4_2:7484930-7484949 | Msa0586380:intron | 45.0% | |
| ! | ACCCTTTGAGGATTGTGACA+AGG | + | chr4_2:7485082-7485101 | Msa0586380:CDS | 45.0% |
| GATTGTGACAAGGAACGAAG+CGG | + | chr4_2:7485092-7485111 | Msa0586380:CDS | 45.0% | |
| TCCTAGAATAGGTGGCAGAA+AGG | + | chr4_2:7485152-7485171 | Msa0586380:CDS | 45.0% | |
| TCCTTTCTGCCACCTATTCT+AGG | - | chr4_2:7485156-7485175 | None:intergenic | 45.0% | |
| AGAATAGGTGGCAGAAAGGA+AGG | + | chr4_2:7485156-7485175 | Msa0586380:CDS | 45.0% | |
| ATGCGCAGATATATAGGCCT+CGG | - | chr4_2:7485540-7485559 | None:intergenic | 45.0% | |
| !!! | TATTTTTATTATTTTTTCTT+TGG | + | chr4_2:7480555-7480574 | Msa0586380:intron | 5.0% |
| !!! | ATTTTTATTATTTTTTCTTT+GGG | + | chr4_2:7480556-7480575 | Msa0586380:intron | 5.0% |
| !! | TTTGAAAATAAAAAATTATA+AGG | - | chr4_2:7483325-7483344 | None:intergenic | 5.0% |
| ! | CGAAGCCACTCCTTTTGGAT+TGG | + | chr4_2:7478687-7478706 | Msa0586380:five_prime_UTR | 50.0% |
| CGAAGCCAATCCAAAAGGAG+TGG | - | chr4_2:7478695-7478714 | None:intergenic | 50.0% | |
| !! | GTGTAGCTTTGTTGCGTAGC+GGG | + | chr4_2:7479412-7479431 | Msa0586380:intron | 50.0% |
| ! | TGTCTGTGTCGGTGCTTCAT+AGG | - | chr4_2:7479607-7479626 | None:intergenic | 50.0% |
| ACCGACACAGACAAGTACAC+CGG | + | chr4_2:7479614-7479633 | Msa0586380:intron | 50.0% | |
| TCCGGTGTACTTGTCTGTGT+CGG | - | chr4_2:7479618-7479637 | None:intergenic | 50.0% | |
| GACACATGCCAATGCACATG+TGG | - | chr4_2:7479702-7479721 | None:intergenic | 50.0% | |
| ! | TGCCAGGAAGCTTGACTTGA+AGG | + | chr4_2:7480636-7480655 | Msa0586380:CDS | 50.0% |
| ! | GCCAGGAAGCTTGACTTGAA+GGG | + | chr4_2:7480637-7480656 | Msa0586380:CDS | 50.0% |
| TCCCTTCAAGTCAAGCTTCC+TGG | - | chr4_2:7480641-7480660 | None:intergenic | 50.0% | |
| !!! | CACCACTTTTTGACTGTGGC+TGG | - | chr4_2:7480996-7481015 | None:intergenic | 50.0% |
| CCACCTACTACTCTGGATTG+TGG | - | chr4_2:7481727-7481746 | None:intergenic | 50.0% | |
| CCACAATCCAGAGTAGTAGG+TGG | + | chr4_2:7481724-7481743 | Msa0586380:intron | 50.0% | |
| AAGAAGGCCACCTACTACTC+TGG | - | chr4_2:7481734-7481753 | None:intergenic | 50.0% | |
| ! | CACACAATCCTGGATGGACT+GGG | + | chr4_2:7481884-7481903 | Msa0586380:CDS | 50.0% |
| !! | ACACAATCCTGGATGGACTG+GGG | + | chr4_2:7481885-7481904 | Msa0586380:CDS | 50.0% |
| AAACTTACCCCAGTCCATCC+AGG | - | chr4_2:7481895-7481914 | None:intergenic | 50.0% | |
| ATTCCTGACTCTGGCTGTGT+TGG | + | chr4_2:7482572-7482591 | Msa0586380:intron | 50.0% | |
| ! | AGACCCAAAGTATCAGCGGA+AGG | + | chr4_2:7482724-7482743 | Msa0586380:CDS | 50.0% |
| TCCTATCACATTTGGCGCCA+TGG | + | chr4_2:7482943-7482962 | Msa0586380:CDS | 50.0% | |
| CCTATCACATTTGGCGCCAT+GGG | + | chr4_2:7482944-7482963 | Msa0586380:CDS | 50.0% | |
| TTCAACCGAGTACCTGCAGA+TGG | + | chr4_2:7483620-7483639 | Msa0586380:intron | 50.0% | |
| GAACTAGCATGCTTTGCTCC+AGG | + | chr4_2:7483645-7483664 | Msa0586380:CDS | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_2:7483887-7483906 | None:intergenic | 50.0% | |
| ACATGAGTGTGGGCACATCA+TGG | + | chr4_2:7484566-7484585 | Msa0586380:CDS | 50.0% | |
| GCACATCATGGAACATCCTG+AGG | + | chr4_2:7484578-7484597 | Msa0586380:CDS | 50.0% | |
| ! | GGTATGTCTTGTTGCCGGTT+AGG | - | chr4_2:7484639-7484658 | None:intergenic | 50.0% |
| GTCGGGCTATGTTGGACTAA+AGG | + | chr4_2:7484711-7484730 | Msa0586380:CDS | 50.0% | |
| CTCACTTCCCAGGTTAACAC+TGG | + | chr4_2:7484940-7484959 | Msa0586380:intron | 50.0% | |
| ! | ACACAGAAGCACACCCTTTG+AGG | + | chr4_2:7485070-7485089 | Msa0586380:CDS | 50.0% |
| TAGGTGGCAGAAAGGAAGGT+CGG | + | chr4_2:7485160-7485179 | Msa0586380:CDS | 50.0% | |
| CAGACGACAATTCACGTCGG+AGG | - | chr4_2:7480423-7480442 | None:intergenic | 55.0% | |
| TGCCCTGTAACACAGCCACA+AGG | - | chr4_2:7480503-7480522 | None:intergenic | 55.0% | |
| GAGTTTGCGACCCAGCTGTA+AGG | - | chr4_2:7481534-7481553 | None:intergenic | 55.0% | |
| CCTGTAGGTGTGTTCCATGC+AGG | - | chr4_2:7481826-7481845 | None:intergenic | 55.0% | |
| CCTGCATGGAACACACCTAC+AGG | + | chr4_2:7481823-7481842 | Msa0586380:CDS | 55.0% | |
| CAAGGACGTGCACACAATCC+TGG | + | chr4_2:7481874-7481893 | Msa0586380:CDS | 55.0% | |
| GACGTGCACACAATCCTGGA+TGG | + | chr4_2:7481878-7481897 | Msa0586380:CDS | 55.0% | |
| GCACACAATCCTGGATGGAC+TGG | + | chr4_2:7481883-7481902 | Msa0586380:CDS | 55.0% | |
| TGACCAACACAGCCAGAGTC+AGG | - | chr4_2:7482578-7482597 | None:intergenic | 55.0% | |
| ! | GACTCTGGCTGTGTTGGTCA+CGG | + | chr4_2:7482578-7482597 | Msa0586380:intron | 55.0% |
| CCGCTGATACTTTGGGTCTC+CGG | - | chr4_2:7482723-7482742 | None:intergenic | 55.0% | |
| ! | CCGGAGACCCAAAGTATCAG+CGG | + | chr4_2:7482720-7482739 | Msa0586380:CDS | 55.0% |
| CCCATGGCGCCAAATGTGAT+AGG | - | chr4_2:7482947-7482966 | None:intergenic | 55.0% | |
| CATTTGGCGCCATGGGTGAT+AGG | + | chr4_2:7482951-7482970 | Msa0586380:CDS | 55.0% | |
| TGCTCCAGGGATGCTTGCTT+TGG | + | chr4_2:7483659-7483678 | Msa0586380:CDS | 55.0% | |
| GCTCCAGGGATGCTTGCTTT+GGG | + | chr4_2:7483660-7483679 | Msa0586380:CDS | 55.0% | |
| GATCCCAAAGCAAGCATCCC+TGG | - | chr4_2:7483666-7483685 | None:intergenic | 55.0% | |
| GCACTAAGGAGGGGTAACCT+TGG | + | chr4_2:7483867-7483886 | Msa0586380:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr4_2:7483922-7483941 | Msa0586380:intron | 55.0% | |
| CTGAAGCTCCCGCATACGTA+GGG | - | chr4_2:7484018-7484037 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATACGT+AGG | - | chr4_2:7484019-7484038 | None:intergenic | 55.0% | |
| ACTCAACTGTCTCTGGCCTC+AGG | - | chr4_2:7484597-7484616 | None:intergenic | 55.0% | |
| CGCATAGAGTCGGGCTATGT+TGG | + | chr4_2:7484703-7484722 | Msa0586380:CDS | 55.0% | |
| TGGCAGAAAGGAAGGTCGGT+CGG | + | chr4_2:7485164-7485183 | Msa0586380:CDS | 55.0% | |
| CAGCTGGGTCGCAAACTCTC+TGG | + | chr4_2:7481536-7481555 | Msa0586380:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_2:7483876-7483895 | Msa0586380:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4_2:7483991-7484010 | Msa0586380:intron | 60.0% |
| CATACGTAGGGTCCGGGAAG+GGG | - | chr4_2:7484006-7484025 | None:intergenic | 60.0% | |
| GCATACGTAGGGTCCGGGAA+GGG | - | chr4_2:7484007-7484026 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTACGTATG+CGG | + | chr4_2:7484006-7484025 | Msa0586380:intron | 60.0% | |
| TTCCCGGACCCTACGTATGC+GGG | + | chr4_2:7484007-7484026 | Msa0586380:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr4_2:7484023-7484042 | Msa0586380:intron | 60.0% | |
| ! | TGTTGCCGGTTAGGCGCCAA+AGG | - | chr4_2:7484630-7484649 | None:intergenic | 60.0% |
| GGCAGAAAGGAAGGTCGGTC+GGG | + | chr4_2:7485165-7485184 | Msa0586380:CDS | 60.0% | |
| AAGTGCACGGTGGCACTGCC+AGG | + | chr4_2:7480620-7480639 | Msa0586380:CDS | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr4_2:7483993-7484012 | None:intergenic | 65.0% | |
| CGCATACGTAGGGTCCGGGA+AGG | - | chr4_2:7484008-7484027 | None:intergenic | 65.0% | |
| CTCCCGCATACGTAGGGTCC+GGG | - | chr4_2:7484012-7484031 | None:intergenic | 65.0% | |
| GCTCCCGCATACGTAGGGTC+CGG | - | chr4_2:7484013-7484032 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr4_2:7484024-7484043 | Msa0586380:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 7478520 | 7485671 | 7478520 | ID=Msa0586380;Name=Msa0586380 |
| chr4_2 | mRNA | 7478520 | 7485671 | 7478520 | ID=Msa0586380-mRNA-1;Parent=Msa0586380;Name=Msa0586380-mRNA-1;_AED=0.10;_eAED=0.10;_QI=402|0.92|1|1|0.84|0.85|14|417|550 |
| chr4_2 | exon | 7478520 | 7479086 | 7478520 | ID=Msa0586380-mRNA-1:exon:1894;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7480195 | 7480242 | 7480195 | ID=Msa0586380-mRNA-1:exon:1895;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7480604 | 7480792 | 7480604 | ID=Msa0586380-mRNA-1:exon:1896;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7480997 | 7481109 | 7480997 | ID=Msa0586380-mRNA-1:exon:1897;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7481539 | 7481604 | 7481539 | ID=Msa0586380-mRNA-1:exon:1898;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7481735 | 7481906 | 7481735 | ID=Msa0586380-mRNA-1:exon:1899;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7482656 | 7482745 | 7482656 | ID=Msa0586380-mRNA-1:exon:1900;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7482848 | 7482972 | 7482848 | ID=Msa0586380-mRNA-1:exon:1901;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7483118 | 7483183 | 7483118 | ID=Msa0586380-mRNA-1:exon:1902;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7483430 | 7483538 | 7483430 | ID=Msa0586380-mRNA-1:exon:1903;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7483639 | 7483737 | 7483639 | ID=Msa0586380-mRNA-1:exon:1904;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7484565 | 7484735 | 7484565 | ID=Msa0586380-mRNA-1:exon:1905;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7484952 | 7485394 | 7484952 | ID=Msa0586380-mRNA-1:exon:1906;Parent=Msa0586380-mRNA-1 |
| chr4_2 | exon | 7485458 | 7485671 | 7485458 | ID=Msa0586380-mRNA-1:exon:1907;Parent=Msa0586380-mRNA-1 |
| chr4_2 | five_prime_UTR | 7478520 | 7478921 | 7478520 | ID=Msa0586380-mRNA-1:five_prime_utr;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7478922 | 7479086 | 7478922 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7480195 | 7480242 | 7480195 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7480604 | 7480792 | 7480604 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7480997 | 7481109 | 7480997 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7481539 | 7481604 | 7481539 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7481735 | 7481906 | 7481735 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7482656 | 7482745 | 7482656 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7482848 | 7482972 | 7482848 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7483118 | 7483183 | 7483118 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7483430 | 7483538 | 7483430 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7483639 | 7483737 | 7483639 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7484565 | 7484735 | 7484565 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | CDS | 7484952 | 7485191 | 7484952 | ID=Msa0586380-mRNA-1:cds;Parent=Msa0586380-mRNA-1 |
| chr4_2 | three_prime_UTR | 7485192 | 7485394 | 7485192 | ID=Msa0586380-mRNA-1:three_prime_utr;Parent=Msa0586380-mRNA-1 |
| chr4_2 | three_prime_UTR | 7485458 | 7485671 | 7485458 | ID=Msa0586380-mRNA-1:three_prime_utr;Parent=Msa0586380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
